BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00012067
         (609 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB99107.1| DNA-directed RNA polymerases I, II, and III subun...    94   4e-17
gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]     92   1e-16
ref|XP_006391977.1| hypothetical protein EUTSA_v10023792mg [Eutr...    91   2e-16
ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [A...    91   3e-16
ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, I...    91   3e-16
gb|EMJ27037.1| hypothetical protein PRUPE_ppa014395mg [Prunus pe...    91   3e-16
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I...    91   3e-16
ref|XP_002326311.1| predicted protein [Populus trichocarpa] gi|5...    91   3e-16
gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221...    91   3e-16
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid...    91   3e-16
gb|EMT31231.1| DNA-directed RNA polymerases I, II, and III subun...    90   5e-16
gb|ESW08328.1| hypothetical protein PHAVU_009G036800g [Phaseolus...    89   9e-16
ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerase subun...    89   9e-16
ref|XP_002532739.1| DNA-directed RNA polymerase II, subunit n, p...    89   9e-16
ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subun...    88   2e-15
ref|XP_006483895.1| PREDICTED: DNA-directed RNA polymerase subun...    88   2e-15
ref|XP_006438333.1| hypothetical protein CICLE_v10033492mg [Citr...    88   2e-15
ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group] g...    88   2e-15
ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group] g...    88   2e-15
gb|EMS59971.1| DNA-directed RNA polymerases I, II, and III subun...    88   2e-15

>gb|EXB99107.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Morus
           notabilis]
          Length = 220

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 45/68 (66%), Positives = 52/68 (76%)
 Frame = -3

Query: 388 EKMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVRXXXXXXXXXXXEDGDK 209
           +KMIIPVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDA+GLVR           +  +K
Sbjct: 116 KKMIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEK 175

Query: 208 LMRWQMES 185
           L+ +  ES
Sbjct: 176 LLNYNSES 183


>gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]
          Length = 113

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 41/45 (91%), Positives = 45/45 (100%)
 Frame = -3

Query: 391 VEKMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           +++MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDA+GLVR
Sbjct: 40  LKRMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVR 84


>ref|XP_006391977.1| hypothetical protein EUTSA_v10023792mg [Eutrema salsugineum]
           gi|557088483|gb|ESQ29263.1| hypothetical protein
           EUTSA_v10023792mg [Eutrema salsugineum]
          Length = 71

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAIGLVR 42


>ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [Amborella trichopoda]
           gi|586757438|ref|XP_006853572.1| hypothetical protein
           AMTR_s00032p00243320 [Amborella trichopoda]
           gi|548833750|gb|ERM96187.1| hypothetical protein
           AMTR_s00001p00093860 [Amborella trichopoda]
           gi|548857225|gb|ERN15039.1| hypothetical protein
           AMTR_s00032p00243320 [Amborella trichopoda]
          Length = 71

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVR 42


>ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC5-like [Fragaria vesca subsp. vesca]
          Length = 71

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVR 42


>gb|EMJ27037.1| hypothetical protein PRUPE_ppa014395mg [Prunus persica]
          Length = 71

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVR 42


>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC5 [Vitis vinifera] gi|297739069|emb|CBI28558.3|
           unnamed protein product [Vitis vinifera]
           gi|508787490|gb|EOY34746.1| RNA polymerases N / 8 kDa
           subunit [Theobroma cacao]
          Length = 71

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVR 42


>ref|XP_002326311.1| predicted protein [Populus trichocarpa]
           gi|566176261|ref|XP_006381558.1| hypothetical protein
           POPTR_0006s13850g [Populus trichocarpa]
           gi|118486243|gb|ABK94963.1| unknown [Populus
           trichocarpa] gi|550336264|gb|ERP59355.1| hypothetical
           protein POPTR_0006s13850g [Populus trichocarpa]
          Length = 71

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVR 42


>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown
           [Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown
           [Picea sitchensis]
          Length = 71

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVR 42


>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
           balbisiana]
          Length = 70

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVR 42


>gb|EMT31231.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
           [Aegilops tauschii]
          Length = 230

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 41/43 (95%), Positives = 42/43 (97%)
 Frame = -3

Query: 385 KMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           KMIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDA+GLVR
Sbjct: 139 KMIIPVRCFTCGKVIGNKWDHYLDLLQADYTEGDALDALGLVR 181


>gb|ESW08328.1| hypothetical protein PHAVU_009G036800g [Phaseolus vulgaris]
          Length = 71

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 40/42 (95%), Positives = 42/42 (100%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVR 42


>ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
           isoform X1 [Glycine max]
           gi|571449916|ref|XP_006578279.1| PREDICTED: DNA-directed
           RNA polymerase subunit 10-like protein-like isoform X2
           [Glycine max] gi|571449919|ref|XP_006578280.1|
           PREDICTED: DNA-directed RNA polymerase subunit 10-like
           protein-like isoform X3 [Glycine max]
           gi|571449921|ref|XP_006578281.1| PREDICTED: DNA-directed
           RNA polymerase subunit 10-like protein-like isoform X4
           [Glycine max]
          Length = 71

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 40/42 (95%), Positives = 42/42 (100%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVR 42


>ref|XP_002532739.1| DNA-directed RNA polymerase II, subunit n, putative [Ricinus
           communis] gi|223527516|gb|EEF29641.1| DNA-directed RNA
           polymerase II, subunit n, putative [Ricinus communis]
          Length = 76

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 40/42 (95%), Positives = 42/42 (100%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVR 42


>ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
           [Oryza brachyantha]
          Length = 74

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVR 42


>ref|XP_006483895.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
           [Citrus sinensis]
          Length = 71

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWDTYLDLLQADY EGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYPEGDALDALGLVR 42


>ref|XP_006438333.1| hypothetical protein CICLE_v10033492mg [Citrus clementina]
           gi|557540529|gb|ESR51573.1| hypothetical protein
           CICLE_v10033492mg [Citrus clementina]
          Length = 105

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWDTYLDLLQADY EGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYPEGDALDALGLVR 42


>ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group]
           gi|62733950|gb|AAX96059.1| dna-directed rna polymerase
           ii 8.2 kda polypeptide (ec 2.7.7.6)(rpb10) (rp10)
           (abc10) [Oryza sativa Japonica Group]
           gi|77549069|gb|ABA91866.1| DNA-directed RNA polymerase
           II 8.2 kDa polypeptide, putative, expressed [Oryza
           sativa Japonica Group] gi|113644643|dbj|BAF27784.1|
           Os11g0194800 [Oryza sativa Japonica Group]
           gi|215766304|dbj|BAG98532.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 74

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVR 42


>ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group]
           gi|113648819|dbj|BAF29331.1| Os12g0180400 [Oryza sativa
           Japonica Group]
          Length = 72

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVR 42


>gb|EMS59971.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
           [Triticum urartu]
          Length = 71

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = -3

Query: 382 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAVGLVR 257
           MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDA+GLVR
Sbjct: 1   MIIPVRCFTCGKVIGNKWDHYLDLLQADYTEGDALDALGLVR 42