BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00011843
         (1818 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004958238.1| PREDICTED: pentatricopeptide repeat-containi...   489   e-135
ref|NP_001142585.1| uncharacterized protein LOC100274849 [Zea ma...   489   e-135
gb|ACN28629.1| unknown [Zea mays] gi|414590824|tpg|DAA41395.1| T...   489   e-135
ref|XP_002460979.1| hypothetical protein SORBIDRAFT_02g038690 [S...   486   e-134
ref|NP_001060217.1| Os07g0603900 [Oryza sativa Japonica Group] g...   485   e-134
gb|EAZ04634.1| hypothetical protein OsI_26782 [Oryza sativa Indi...   485   e-134
gb|EMT25244.1| hypothetical protein F775_29318 [Aegilops tauschii]    478   e-132
ref|XP_003562733.1| PREDICTED: pentatricopeptide repeat-containi...   473   e-131
dbj|BAJ96578.1| predicted protein [Hordeum vulgare subsp. vulgare]    473   e-130
dbj|BAJ90531.1| predicted protein [Hordeum vulgare subsp. vulgar...   473   e-130
ref|XP_002302931.1| predicted protein [Populus trichocarpa]           429   e-117
gb|EOY22114.1| Pentatricopeptide repeat-containing protein, puta...   425   e-116
ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi...   425   e-116
emb|CBI15328.3| unnamed protein product [Vitis vinifera]              425   e-116
ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containi...   424   e-116
ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containi...   422   e-115
ref|XP_006658781.1| PREDICTED: pentatricopeptide repeat-containi...   422   e-115
ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containi...   419   e-114
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,...   417   e-114
ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containi...   417   e-113

>ref|XP_004958238.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Setaria italica]
          Length = 485

 Score =  489 bits (1260), Expect = e-135
 Identities = 257/421 (61%), Positives = 295/421 (70%), Gaps = 1/421 (0%)
 Frame = +3

Query: 279  YFSLHFSDVRFNTSLLAEILNLSHEAG-RSVIDLYRWIVRYRSFTPSDASLSLVVHFLGR 455
            YFSLHFSDVR   +LLAE L LS  A  R+  DL+R++VR RS  PSD +L+ VV  L R
Sbjct: 68   YFSLHFSDVRPTNALLAEALALSPPASSRAAADLFRFLVRRRSLHPSDGALAPVVRHLAR 127

Query: 456  RKDFKAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXX 635
            R+DF A+ +L+ EF   +GP    A L + ARAGR T A++ FD  P +L   R+     
Sbjct: 128  RRDFPAVRALIQEFPTALGPDTLDAYLHQFARAGRPTDAVKVFDELPEQL---RNREALT 184

Query: 636  XXXXXXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGG 815
                     GFP HAE AAK+ A E+FPD+ IC  L+ G+ NAGKL+ A RL+GE  RGG
Sbjct: 185  SLVSSLSAEGFPSHAERAAKKVANEIFPDDNICTLLVSGYANAGKLDHALRLIGETRRGG 244

Query: 816  FDLGTPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKI 995
            F  G  AYNA+LDCVCRLCRKKDPLR+  EAEK LL+MEA+GIPRDA TFRVLI+NLCKI
Sbjct: 245  FQPGLDAYNAVLDCVCRLCRKKDPLRMPVEAEKFLLDMEANGIPRDAGTFRVLITNLCKI 304

Query: 996  RMTEDAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRK 1175
            R TEDAM  FRRM EWGCSPDA+TYL LIRSLYQAAR+SEGDEM+ WMRSAGFGD+LDRK
Sbjct: 305  RKTEDAMNLFRRMGEWGCSPDADTYLVLIRSLYQAARISEGDEMMTWMRSAGFGDKLDRK 364

Query: 1176 AYYGFVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEA 1355
             YYGF+KILCGIERVEHA+KVFRMMKGYGHAPGVKSYSLLIEKL  HN GDRANALF+EA
Sbjct: 365  VYYGFIKILCGIERVEHAVKVFRMMKGYGHAPGVKSYSLLIEKLTKHNLGDRANALFREA 424

Query: 1356 VARRVPVTPKVYXXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKKNRM 1535
            VAR V V P  Y                 RLT  EK             SFVKKP++   
Sbjct: 425  VARGVTVAPGEYKIDKKYVKAKKEKKVKKRLTLPEKKRLKSKRLYKLRMSFVKKPRRRMR 484

Query: 1536 A 1538
            A
Sbjct: 485  A 485


>ref|NP_001142585.1| uncharacterized protein LOC100274849 [Zea mays]
            gi|195606910|gb|ACG25285.1| hypothetical protein [Zea
            mays]
          Length = 484

 Score =  489 bits (1259), Expect = e-135
 Identities = 254/422 (60%), Positives = 298/422 (70%), Gaps = 1/422 (0%)
 Frame = +3

Query: 279  YFSLHFSDVRFNTSLLAEILNLSHEA-GRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGR 455
            YFSLHFSDVR   +LLAE L LS  A  R+  DL+R++VR RS  PSD +L+ +V  L R
Sbjct: 66   YFSLHFSDVRPTNALLAEALALSPPATSRAAADLFRFLVRRRSLHPSDGALAPIVRHLAR 125

Query: 456  RKDFKAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXX 635
            R+DF A+ +L+ EF   +GP    A L++L RAGR T A++ FD  P +L   R+     
Sbjct: 126  RRDFPAVRALIQEFPTALGPATLDAYLQQLTRAGRPTDAVKVFDELPEQL---RNREALT 182

Query: 636  XXXXXXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGG 815
                     GFP HAE AAK+ A+E+FPD+ IC  L+ G+ NAGKL+ A RL+GE  RGG
Sbjct: 183  LLVSSLSSEGFPSHAERAAKKVASEIFPDDNICTLLVSGYANAGKLDHALRLIGETRRGG 242

Query: 816  FDLGTPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKI 995
            F  G  AYNA+LDCVCRLCRKKDPLR+  EAEK L++MEA+GIPRDA TFRVLI+N CKI
Sbjct: 243  FHPGLDAYNAVLDCVCRLCRKKDPLRMPIEAEKFLVDMEANGIPRDAGTFRVLITNFCKI 302

Query: 996  RMTEDAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRK 1175
            R T DAM  F+RM EWGCSPDA+TYL LIRSLYQAAR SEGDEM+ WMRSAGFGD+LDRK
Sbjct: 303  RKTGDAMNLFQRMGEWGCSPDADTYLVLIRSLYQAARTSEGDEMMTWMRSAGFGDKLDRK 362

Query: 1176 AYYGFVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEA 1355
            AYYGF+KILCGIERVEHA+KVFRMMKGYGHAPGVKSYSLLIEKLA HN GDR+NALF+EA
Sbjct: 363  AYYGFIKILCGIERVEHAVKVFRMMKGYGHAPGVKSYSLLIEKLARHNLGDRSNALFREA 422

Query: 1356 VARRVPVTPKVYXXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKKNRM 1535
            VAR VPV    Y                 RLT  EKM            SFVKKPK+  +
Sbjct: 423  VARGVPVAQGEYNVDKRYVKTKKEKTVKKRLTLPEKMRLKSKRLYKLRMSFVKKPKRRML 482

Query: 1536 AI 1541
             +
Sbjct: 483  RV 484


>gb|ACN28629.1| unknown [Zea mays] gi|414590824|tpg|DAA41395.1| TPA: hypothetical
            protein ZEAMMB73_277016 [Zea mays]
            gi|414590825|tpg|DAA41396.1| TPA: hypothetical protein
            ZEAMMB73_277016 [Zea mays] gi|414590826|tpg|DAA41397.1|
            TPA: hypothetical protein ZEAMMB73_277016 [Zea mays]
          Length = 484

 Score =  489 bits (1258), Expect = e-135
 Identities = 253/422 (59%), Positives = 298/422 (70%), Gaps = 1/422 (0%)
 Frame = +3

Query: 279  YFSLHFSDVRFNTSLLAEILNLSHEA-GRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGR 455
            YFSLHFSDVR   +LLAE L LS  A  R+  DL+R++VR RS  PSD +L+ +V  L R
Sbjct: 66   YFSLHFSDVRPTNALLAEALALSPPATSRAAADLFRFLVRRRSLHPSDGALAPIVRHLAR 125

Query: 456  RKDFKAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXX 635
            R+DF A+ +L+ EF   +GP    A L++L RAGR T A++ FD  P +L   R+     
Sbjct: 126  RRDFPAVRALIQEFPTALGPTTLDAYLQQLTRAGRPTDAVKVFDELPEQL---RNREALT 182

Query: 636  XXXXXXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGG 815
                     GFP HAE AAK+ A+E+FPD+ IC  L+ G+ NAGKL+ A RL+GE  RGG
Sbjct: 183  LLVSSLSSEGFPSHAERAAKKVASEIFPDDNICTLLVSGYANAGKLDHALRLIGETRRGG 242

Query: 816  FDLGTPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKI 995
            F  G  AYNA+LDCVCRLCRKKDPLR+  EAEK L++MEA+GIPRDA TFRVLI+N CKI
Sbjct: 243  FHPGLDAYNAVLDCVCRLCRKKDPLRMPIEAEKFLVDMEANGIPRDAGTFRVLITNFCKI 302

Query: 996  RMTEDAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRK 1175
            R T DAM  F+RM EWGCSPDA+TYL LIRSLYQAAR SEGDEM+ WMRSAGFGD+LDRK
Sbjct: 303  RKTGDAMNLFQRMGEWGCSPDADTYLVLIRSLYQAARTSEGDEMITWMRSAGFGDKLDRK 362

Query: 1176 AYYGFVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEA 1355
            AYYGF+KILCGIERVEHA+KVFRMMKGYGHAPGVKSY+LLIEKLA HN GDR+NALF+EA
Sbjct: 363  AYYGFIKILCGIERVEHAVKVFRMMKGYGHAPGVKSYTLLIEKLARHNLGDRSNALFREA 422

Query: 1356 VARRVPVTPKVYXXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKKNRM 1535
            VAR VPV    Y                 RLT  EKM            SFVKKPK+  +
Sbjct: 423  VARGVPVAQGEYNVDKRYVKTKKEKTVKKRLTLPEKMRLKSKRLYKLRMSFVKKPKRRML 482

Query: 1536 AI 1541
             +
Sbjct: 483  RV 484


>ref|XP_002460979.1| hypothetical protein SORBIDRAFT_02g038690 [Sorghum bicolor]
            gi|241924356|gb|EER97500.1| hypothetical protein
            SORBIDRAFT_02g038690 [Sorghum bicolor]
          Length = 484

 Score =  486 bits (1252), Expect = e-134
 Identities = 253/422 (59%), Positives = 298/422 (70%), Gaps = 1/422 (0%)
 Frame = +3

Query: 279  YFSLHFSDVRFNTSLLAEILNLSHEA-GRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGR 455
            YFSLHFSDVR   +LLAE L LS  A  R+  +L+R++VR RS  PSD +L+ VV  L R
Sbjct: 66   YFSLHFSDVRPTNALLAEALALSPPATSRAAAELFRFLVRRRSLHPSDGALAPVVRHLAR 125

Query: 456  RKDFKAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXX 635
            R+DF A+ +L+ EF   +GP    A L++LARAGR T A++ FD  P +L   R+     
Sbjct: 126  RRDFPAVRALIQEFPTALGPATLDAYLQQLARAGRPTDAVKVFDELPEQL---RNREALT 182

Query: 636  XXXXXXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGG 815
                     GFP HAE AAK+ A E+FPD+ IC  L+ G+ NAGKL+ A RL+GE  RGG
Sbjct: 183  LLVSALSAEGFPSHAERAAKKVANEIFPDDNICTLLVSGYANAGKLDHALRLIGETRRGG 242

Query: 816  FDLGTPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKI 995
            F  G  AYNA+LDCVCRLCRKKDPLR+  EAEK L++MEA+GIPRDA TFRVLI+N CKI
Sbjct: 243  FQPGLDAYNAVLDCVCRLCRKKDPLRMPMEAEKFLVDMEANGIPRDAGTFRVLITNFCKI 302

Query: 996  RMTEDAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRK 1175
            R TEDAM  FR M EWGCSPDA+TYL LIRSLYQAAR SEGDEM+ WMRSAGFGD+LDRK
Sbjct: 303  RKTEDAMNLFRCMGEWGCSPDADTYLVLIRSLYQAARTSEGDEMMTWMRSAGFGDKLDRK 362

Query: 1176 AYYGFVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEA 1355
            AYYGF+KILCGI+RVEHA+KVFRMMKGYGHAPGVKSYSLLIEKLA HN GDR++AL++EA
Sbjct: 363  AYYGFIKILCGIDRVEHALKVFRMMKGYGHAPGVKSYSLLIEKLARHNLGDRSSALYREA 422

Query: 1356 VARRVPVTPKVYXXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKKNRM 1535
            VAR VPV    Y                 RLT  EKM            SFVKKPK+  +
Sbjct: 423  VARGVPVAQGEYSIDKRYVKAKKEKKVKKRLTLPEKMRLKSKRLYKLRMSFVKKPKRRMV 482

Query: 1536 AI 1541
             +
Sbjct: 483  RV 484


>ref|NP_001060217.1| Os07g0603900 [Oryza sativa Japonica Group]
            gi|34394565|dbj|BAC83868.1| unknown protein [Oryza sativa
            Japonica Group] gi|34394935|dbj|BAC84486.1| unknown
            protein [Oryza sativa Japonica Group]
            gi|113611753|dbj|BAF22131.1| Os07g0603900 [Oryza sativa
            Japonica Group] gi|125601001|gb|EAZ40577.1| hypothetical
            protein OsJ_25034 [Oryza sativa Japonica Group]
            gi|215686658|dbj|BAG88911.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 486

 Score =  485 bits (1249), Expect = e-134
 Identities = 254/422 (60%), Positives = 297/422 (70%), Gaps = 1/422 (0%)
 Frame = +3

Query: 279  YFSLHFSDVRFNTSLLAEILNLSHEA-GRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGR 455
            YFSLHFSDVR   +LLAE L L+  A  R+  +L+R++VR RS  PSD++L+ VV  L R
Sbjct: 68   YFSLHFSDVRPTNALLAEALALAPPATSRAAAELFRFLVRRRSLHPSDSALAPVVRHLAR 127

Query: 456  RKDFKAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXX 635
            R+DF A+ SL+ EF   +G     A L  LARAGR T A++ FD  P +L   R      
Sbjct: 128  RRDFPAVRSLVQEFPSALGHDTLDAYLLSLARAGRATDAVKVFDELPPQL---RTRQALT 184

Query: 636  XXXXXXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGG 815
                     G+P HAEGA K+ A E+FPD+ IC  L+ G+ NAGKL+ A RL+GE  RGG
Sbjct: 185  SLVSSLSAEGWPSHAEGAVKKVANEIFPDDNICTLLVSGYANAGKLDHALRLIGETRRGG 244

Query: 816  FDLGTPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKI 995
            F  G  AYNA+LDC+CRLCRKKDPLR+  EAEK L++MEA+GIPRDA TFRVLI+NLCKI
Sbjct: 245  FQPGLDAYNAVLDCICRLCRKKDPLRMPAEAEKFLVDMEANGIPRDAGTFRVLITNLCKI 304

Query: 996  RMTEDAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRK 1175
            R TEDAM  FRRM EWGCSPDA+TYL LI+SLYQAAR+SEGDEM+ WMRSAGFG +LDRK
Sbjct: 305  RKTEDAMNLFRRMGEWGCSPDADTYLVLIKSLYQAARISEGDEMMTWMRSAGFGAKLDRK 364

Query: 1176 AYYGFVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEA 1355
            AYYGF+KILCGIERVEHA+KVFRMMKGYGHAPG KSYSLLIEKL  HN GDRANALF+EA
Sbjct: 365  AYYGFIKILCGIERVEHAVKVFRMMKGYGHAPGTKSYSLLIEKLTRHNLGDRANALFREA 424

Query: 1356 VARRVPVTPKVYXXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKKNRM 1535
            VAR V VTP VY                 RLT  EKM            SFVKKPK+  +
Sbjct: 425  VARGVTVTPGVYKIDKKYVKAKKEKKVKKRLTLPEKMRLKSKRLYKLRMSFVKKPKRRMV 484

Query: 1536 AI 1541
             +
Sbjct: 485  RV 486


>gb|EAZ04634.1| hypothetical protein OsI_26782 [Oryza sativa Indica Group]
          Length = 483

 Score =  485 bits (1248), Expect = e-134
 Identities = 254/422 (60%), Positives = 296/422 (70%), Gaps = 1/422 (0%)
 Frame = +3

Query: 279  YFSLHFSDVRFNTSLLAEILNLSHEA-GRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGR 455
            YFSLHFSDVR   +LLAE L L+  A  R+  +L+R++VR RS  PSD++L+ VV  L R
Sbjct: 65   YFSLHFSDVRPTNALLAEALALAPPATSRAAAELFRFLVRRRSLHPSDSALAPVVRHLAR 124

Query: 456  RKDFKAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXX 635
            R+DF A+ SL+ EF   +G     A L  LARAGR T A++ FD  P  L   R      
Sbjct: 125  RRDFPAVRSLVQEFPSALGHDTLDAYLLSLARAGRATDAVKVFDELPPHL---RTRQALT 181

Query: 636  XXXXXXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGG 815
                     G+P HAEGA K+ A E+FPD+ IC  L+ G+ NAGKL+ A RL+GE  RGG
Sbjct: 182  SLVSSLSAEGWPSHAEGAVKKVANEIFPDDNICTLLVSGYANAGKLDHALRLIGETRRGG 241

Query: 816  FDLGTPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKI 995
            F  G  AYNA+LDC+CRLCRKKDPLR+  EAEK L++MEA+GIPRDA TFRVLI+NLCKI
Sbjct: 242  FQPGLDAYNAVLDCICRLCRKKDPLRMPAEAEKFLVDMEANGIPRDAGTFRVLITNLCKI 301

Query: 996  RMTEDAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRK 1175
            R TEDAM  FRRM EWGCSPDA+TYL LI+SLYQAAR+SEGDEM+ WMRSAGFG +LDRK
Sbjct: 302  RKTEDAMNLFRRMGEWGCSPDADTYLVLIKSLYQAARISEGDEMMTWMRSAGFGTKLDRK 361

Query: 1176 AYYGFVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEA 1355
            AYYGF+KILCGIERVEHA+KVFRMMKGYGHAPG KSYSLLIEKL  HN GDRANALF+EA
Sbjct: 362  AYYGFIKILCGIERVEHAVKVFRMMKGYGHAPGTKSYSLLIEKLTRHNLGDRANALFREA 421

Query: 1356 VARRVPVTPKVYXXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKKNRM 1535
            VAR V VTP VY                 RLT  EKM            SFVKKPK+  +
Sbjct: 422  VARGVTVTPGVYKIDKKYVKAKKEKKVKKRLTLPEKMRLKSKRLYKLRMSFVKKPKRRMV 481

Query: 1536 AI 1541
             +
Sbjct: 482  RV 483


>gb|EMT25244.1| hypothetical protein F775_29318 [Aegilops tauschii]
          Length = 548

 Score =  478 bits (1229), Expect = e-132
 Identities = 253/421 (60%), Positives = 296/421 (70%), Gaps = 1/421 (0%)
 Frame = +3

Query: 279  YFSLHFSDVRFNTSLLAEILNLSHEA-GRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGR 455
            YFSLHFSDVR   +LLAE L+LS  A  R+  DL+R++VR RS  PSD +L+LVV  L R
Sbjct: 132  YFSLHFSDVRPTNALLAETLSLSPPATSRAAADLFRFLVR-RSLHPSDGALALVVRHLAR 190

Query: 456  RKDFKAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXX 635
            R+DF A+ +LL EF   +GP    A L  LARAGR T AL+ FD  P EL   R      
Sbjct: 191  RRDFPAVRTLLQEFPSALGPDTVDAYLFHLARAGRATDALKVFDELPGEL---RTRGALT 247

Query: 636  XXXXXXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGG 815
                     GFP  AE A K+ A E+FPD+ IC  L+ G+ +AGKL+ A RL+GE   GG
Sbjct: 248  SLVSSLSSEGFPQLAERAVKKIAHEIFPDDNICTLLVSGYADAGKLDHALRLIGETRNGG 307

Query: 816  FDLGTPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKI 995
            F  G  AYNA+LDCVCRLCRKKDPLR+  EAEK L++MEA+GIPRDA TFRVLI NLCKI
Sbjct: 308  FQPGLDAYNAVLDCVCRLCRKKDPLRMPVEAEKFLVDMEANGIPRDAGTFRVLIKNLCKI 367

Query: 996  RMTEDAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRK 1175
            R TEDAM  FR+M EWGCSPDA+TYL LI+SLYQAAR+SEGDE++ WMRSAGFGD+LDRK
Sbjct: 368  RRTEDAMNLFRQMGEWGCSPDADTYLVLIKSLYQAARISEGDELMIWMRSAGFGDKLDRK 427

Query: 1176 AYYGFVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEA 1355
            AYYGF+K+LCGIERVEHA+KVFR+MKGYGHAPG KSYSLLIEKLA+HN GDR+NALF+EA
Sbjct: 428  AYYGFIKVLCGIERVEHAVKVFRLMKGYGHAPGTKSYSLLIEKLASHNLGDRSNALFREA 487

Query: 1356 VARRVPVTPKVYXXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKKNRM 1535
            VAR + VTP VY                 +LT  EK             SFVKKPK+   
Sbjct: 488  VARGITVTPGVYKIDKRYVKEKKEKKVKKKLTLPEKKILKSKRLYKLKMSFVKKPKRRMR 547

Query: 1536 A 1538
            A
Sbjct: 548  A 548


>ref|XP_003562733.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Brachypodium distachyon]
          Length = 481

 Score =  473 bits (1218), Expect = e-131
 Identities = 253/417 (60%), Positives = 291/417 (69%), Gaps = 1/417 (0%)
 Frame = +3

Query: 279  YFSLHFSDVRFNTSLLAEILNLSHEA-GRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGR 455
            YFSLHFSDVR   +LLAE L LS  A  R+  DL+R++VR RS  PSD +L+LVV  L R
Sbjct: 65   YFSLHFSDVRPTNALLAETLALSPPATSRAAADLFRFLVR-RSLHPSDGALALVVRHLAR 123

Query: 456  RKDFKAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXX 635
            R+DF A+ +LL EF   +GP    A L  LARAGR T AL+ FD  P +L   R+     
Sbjct: 124  RRDFPAVRTLLQEFPSALGPATLHAYLFHLARAGRATDALKLFDDLPEQL---RNREALT 180

Query: 636  XXXXXXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGG 815
                     GFP  AE A K+ A E+FPD+ IC  L+ G+ +AGKL+ A RL+ E   GG
Sbjct: 181  SLVSSLSSEGFPQLAERAVKKVAHEIFPDDNICTLLVSGYADAGKLDHALRLISETRNGG 240

Query: 816  FDLGTPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKI 995
            F  G  AYNA+LDCVCRLCRKKDPL +  EAEK L +MEA+GIPRDA TFRVLI NLCKI
Sbjct: 241  FQPGLDAYNAVLDCVCRLCRKKDPLLMPVEAEKFLGDMEANGIPRDAGTFRVLIKNLCKI 300

Query: 996  RMTEDAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRK 1175
            RMTE AM  F+RM EWGCSPDA+TYL LI+SLYQAAR++EGDEM+ WMRSAGFGD+LDRK
Sbjct: 301  RMTESAMNLFQRMGEWGCSPDADTYLILIKSLYQAARLAEGDEMMTWMRSAGFGDKLDRK 360

Query: 1176 AYYGFVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEA 1355
            AYYGFVK+LCGIERVEHAMKVFRMMKGYGHAPG KSYSLLIEKLA HN GDR+NALF+EA
Sbjct: 361  AYYGFVKVLCGIERVEHAMKVFRMMKGYGHAPGTKSYSLLIEKLARHNLGDRSNALFREA 420

Query: 1356 VARRVPVTPKVYXXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKK 1526
            VAR V VTP VY                 RLT  EK             SFVKKP++
Sbjct: 421  VARGVTVTPGVYKIDKRYVKEKKEKKVKKRLTLPEKKILKSKRLYKLKMSFVKKPRR 477


>dbj|BAJ96578.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 482

 Score =  473 bits (1216), Expect = e-130
 Identities = 251/417 (60%), Positives = 294/417 (70%), Gaps = 1/417 (0%)
 Frame = +3

Query: 279  YFSLHFSDVRFNTSLLAEILNLSHEA-GRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGR 455
            YFSLHFSDVR   +LLAE L+LS  A  R+  DL+R++VR RS  PSD +L+LVV  L R
Sbjct: 66   YFSLHFSDVRPTNALLAETLSLSPPATSRAAADLFRFLVR-RSLHPSDGALALVVRHLAR 124

Query: 456  RKDFKAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXX 635
            R+DF A+ +LL EF   +GP    A L  LARAGR T AL+ FD  P EL  +R      
Sbjct: 125  RRDFPAVRTLLQEFPSALGPDTVDAYLFHLARAGRATDALKVFDELPGELHTRR---ALT 181

Query: 636  XXXXXXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGG 815
                     GFP  AE A K+ A E+FPD+ IC  L+ G+ +AGKL+ A RL+GE   GG
Sbjct: 182  SLVSSLSSEGFPQLAERAVKKIAHEIFPDDNICTLLVSGYADAGKLDHALRLIGETRNGG 241

Query: 816  FDLGTPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKI 995
            F  G  AYNA+LDCVCRLCRKKDPLR+  EAEK L++ME++GIPRD  TFRVLI NLCKI
Sbjct: 242  FQPGLDAYNAVLDCVCRLCRKKDPLRMPVEAEKFLVDMESNGIPRDVGTFRVLIKNLCKI 301

Query: 996  RMTEDAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRK 1175
            R TEDA+K F +M EWGCSPDA+TYL LI+SLYQAAR+SEGDEM+ WMRSAGFGD+LDRK
Sbjct: 302  RRTEDAIKLFGQMGEWGCSPDADTYLILIKSLYQAARISEGDEMMIWMRSAGFGDKLDRK 361

Query: 1176 AYYGFVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEA 1355
            AYYGF+K+LCGIERVEHA+KVFR+MKGYGHAPG KSYSLLIEKLA HN GDR+NALF+EA
Sbjct: 362  AYYGFIKVLCGIERVEHAVKVFRLMKGYGHAPGTKSYSLLIEKLARHNLGDRSNALFREA 421

Query: 1356 VARRVPVTPKVYXXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKK 1526
            +AR V VTP VY                 RLT  EK             SFVKKPK+
Sbjct: 422  LARGVTVTPGVYKIDKRYVKEKKEKRVKKRLTLPEKKILKSKRLYKLKMSFVKKPKR 478


>dbj|BAJ90531.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326509169|dbj|BAJ86977.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 482

 Score =  473 bits (1216), Expect = e-130
 Identities = 251/417 (60%), Positives = 294/417 (70%), Gaps = 1/417 (0%)
 Frame = +3

Query: 279  YFSLHFSDVRFNTSLLAEILNLSHEA-GRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGR 455
            YFSLHFSDVR   +LLAE L+LS  A  R+  DL+R++VR RS  PSD +L+LVV  L R
Sbjct: 66   YFSLHFSDVRPTNALLAETLSLSPPATSRAAADLFRFLVR-RSLHPSDGALALVVRHLAR 124

Query: 456  RKDFKAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXX 635
            R+DF A+ +LL EF   +GP    A L  LARAGR T AL+ FD  P EL  +R      
Sbjct: 125  RRDFPAVRTLLQEFPSALGPDTVDAYLFHLARAGRATDALKVFDELPGELHTRR---ALT 181

Query: 636  XXXXXXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGG 815
                     GFP  AE A K+ A E+FPD+ IC  L+ G+ +AGKL+ A RL+GE   GG
Sbjct: 182  SLVSSLSSEGFPQLAERAVKKIAHEIFPDDNICTLLVSGYADAGKLDHALRLIGETRNGG 241

Query: 816  FDLGTPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKI 995
            F  G  AYNA+LDCVCRLCRKKDPLR+  EAEK L++ME++GIPRD  TFRVLI NLCKI
Sbjct: 242  FQPGLDAYNAVLDCVCRLCRKKDPLRMPVEAEKFLVDMESNGIPRDVGTFRVLIKNLCKI 301

Query: 996  RMTEDAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRK 1175
            R TEDA+K F +M EWGCSPDA+TYL LI+SLYQAAR+SEGDEM+ WMRSAGFGD+LDRK
Sbjct: 302  RRTEDAIKLFGQMGEWGCSPDADTYLILIKSLYQAARISEGDEMMIWMRSAGFGDKLDRK 361

Query: 1176 AYYGFVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEA 1355
            AYYGF+K+LCGIERVEHA+KVFR+MKGYGHAPG KSYSLLIEKLA HN GDR+NALF+EA
Sbjct: 362  AYYGFIKVLCGIERVEHAVKVFRLMKGYGHAPGTKSYSLLIEKLARHNLGDRSNALFREA 421

Query: 1356 VARRVPVTPKVYXXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKK 1526
            +AR V VTP VY                 RLT  EK             SFVKKPK+
Sbjct: 422  LARGVTVTPGVYKIDKRYVKEKKEKKVKKRLTLPEKKILKSKRLYKLKMSFVKKPKR 478


>ref|XP_002302931.1| predicted protein [Populus trichocarpa]
          Length = 516

 Score =  429 bits (1104), Expect = e-117
 Identities = 214/404 (52%), Positives = 273/404 (67%), Gaps = 1/404 (0%)
 Frame = +3

Query: 318  SLLAEILNLSHEAGRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGRRKDFKAIDSLLSEF 497
            SL+ + L LS +AGR+VI  + W+++  +F  +D SL+L V + GRRKDFKA   LL E 
Sbjct: 107  SLVLQTLKLSPDAGRTVIGFHNWLIKDANFEQNDESLALFVDYFGRRKDFKAAHDLLVEG 166

Query: 498  RRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXXXXXXXXXEHGFPGH 677
            +   G   F + ++RL RAGR TQ + FF+    + G +RD            E+G+  +
Sbjct: 167  KSVAGVKCFESMIDRLVRAGRTTQVIGFFERMERDYGFKRDKESLTFVVQKLCENGYASY 226

Query: 678  AEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGGFDLGTPAYNAILDC 857
            AE   K  A E+FPD+GIC+ LI+GWC  GKLEEA+RL GE+ RGGF++GT A+NA+LDC
Sbjct: 227  AEKMVKNLANEIFPDDGICDLLIKGWCVDGKLEEAKRLAGEMYRGGFEIGTMAFNAMLDC 286

Query: 858  VCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKIRMTEDAMKTFRRMS 1037
            VC+LCR+KDP RL+ E EK+L+EM+  G+PR+ ETF VLISNLCK+R TEDAMK F R+ 
Sbjct: 287  VCKLCREKDPFRLESEVEKVLMEMDIRGVPRNVETFNVLISNLCKVRRTEDAMKLFSRIG 346

Query: 1038 EWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRKAYYGFVKILCGIER 1217
            EWGC PD  T+L LIRSLYQAARV EGDEM+  M+SAG+GD+LD+KAYYGF+KILCGIER
Sbjct: 347  EWGCCPDETTFLVLIRSLYQAARVGEGDEMIDRMKSAGYGDKLDKKAYYGFLKILCGIER 406

Query: 1218 VEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEAVARRVPVTPKVY-X 1394
            +EHAM VF MMK  G  PG+K+Y LL+ K  THN+ D+AN L+ EA++  V VTPK Y  
Sbjct: 407  LEHAMSVFEMMKADGCKPGIKTYDLLMGKWCTHNRLDKANVLYNEALSNGVTVTPKEYRV 466

Query: 1395 XXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKK 1526
                            R T  EKMA           SFVKKPKK
Sbjct: 467  DPKFMKKPKAVKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKK 510


>gb|EOY22114.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao]
          Length = 494

 Score =  425 bits (1093), Expect = e-116
 Identities = 218/414 (52%), Positives = 274/414 (66%), Gaps = 1/414 (0%)
 Frame = +3

Query: 288  LHFSDVRFNTSLLAEILNLSHEAGRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGRRKDF 467
            L FS ++  + L+++ LNLS EAGR+V+    W++   +F  +D +LS  + + GRRKDF
Sbjct: 76   LSFSHIKPTSLLISQTLNLSPEAGRTVLGFNDWLLSDPNFNHTDETLSFFIDYFGRRKDF 135

Query: 468  KAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXXXXXX 647
            KA   LL   +   GP  F +S++RL RAGR  Q L FF+    + G +RD         
Sbjct: 136  KAAHDLLVNNKSVAGPKTFESSVDRLVRAGRPAQVLGFFEGMGKDYGFKRDKESLRLIVE 195

Query: 648  XXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGGFDLG 827
               E+G+  +AE   K  A E+FPDE IC+ LI+GWC  GKLEEA+RL GE+ RGGF++G
Sbjct: 196  KLCENGYASYAEKMVKNSANEIFPDEMICDLLIKGWCVDGKLEEAKRLAGEMYRGGFEIG 255

Query: 828  TPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKIRMTE 1007
            T AYNA+LDCVC+LCRKKDP RL  EAEK+LL+M+  G+PR+ ETF VL++NLCKIR TE
Sbjct: 256  TMAYNAMLDCVCKLCRKKDPFRLHSEAEKVLLDMDIYGVPRNVETFNVLMNNLCKIRKTE 315

Query: 1008 DAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRKAYYG 1187
            DAMK F RM EWGC PDAE+YL LIRSLYQAARV+EGDEM+  M+SAGFGD+L  K YY 
Sbjct: 316  DAMKLFYRMGEWGCYPDAESYLILIRSLYQAARVAEGDEMIDRMKSAGFGDKLGEKEYYS 375

Query: 1188 FVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEAVARR 1367
            F+KILCG+ERVEHA+ VF+ MK  G  PG+K+Y LL+ K   HN+ DRANAL+ EAV   
Sbjct: 376  FLKILCGVERVEHAIIVFKKMKADGCKPGIKTYDLLMGKWCGHNRLDRANALYNEAVENG 435

Query: 1368 VPVTPKVY-XXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKK 1526
            VPV PK Y                  R T  EKMA           SFVKKPK+
Sbjct: 436  VPVEPKPYRVDPRYMKKTKAVKEEKKRETLPEKMARKRRRLKQIRLSFVKKPKR 489


>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Vitis vinifera]
          Length = 516

 Score =  425 bits (1092), Expect = e-116
 Identities = 216/418 (51%), Positives = 272/418 (65%), Gaps = 1/418 (0%)
 Frame = +3

Query: 288  LHFSDVRFNTSLLAEILNLSHEAGRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGRRKDF 467
            L FS +  +  L+ + LN S +AGR+V+  Y+W+     F  SD ++S  V + GRRKDF
Sbjct: 98   LSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDF 157

Query: 468  KAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXXXXXX 647
            KAI  +L + R   G     ++++RL RAGR TQ + FFD    + G +RD         
Sbjct: 158  KAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVS 217

Query: 648  XXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGGFDLG 827
               EHGF  HAE   K  A E+FP+E IC+ LI+GWC  GKL+EARRL  E+ RGGF++G
Sbjct: 218  KLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGFEIG 277

Query: 828  TPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKIRMTE 1007
            T AYN+ILDC+C+LCRKKDP RL+ EAEKIL++M+ +G+PR+ ETF VLI+NLCKIR TE
Sbjct: 278  TMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVLITNLCKIRKTE 337

Query: 1008 DAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRKAYYG 1187
            DAMK F RM EWGC P+  T+L L RSLYQAARV EGDEM+  M+SAGFG+ LD+KAYY 
Sbjct: 338  DAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGFGNALDKKAYYE 397

Query: 1188 FVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEAVARR 1367
            F+KILCGIER++HAM +F  MK  G  PG+K+Y LL+ KL  H + D+ANALF EAV R 
Sbjct: 398  FIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKANALFSEAVNRG 457

Query: 1368 VPVTPKVY-XXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKKNRMA 1538
            VPV  K Y                  R T  EKMA           SFVKKPK+ R A
Sbjct: 458  VPVESKAYKLDPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLSFVKKPKRMRRA 515


>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  425 bits (1092), Expect = e-116
 Identities = 216/418 (51%), Positives = 272/418 (65%), Gaps = 1/418 (0%)
 Frame = +3

Query: 288  LHFSDVRFNTSLLAEILNLSHEAGRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGRRKDF 467
            L FS +  +  L+ + LN S +AGR+V+  Y+W+     F  SD ++S  V + GRRKDF
Sbjct: 114  LSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDF 173

Query: 468  KAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXXXXXX 647
            KAI  +L + R   G     ++++RL RAGR TQ + FFD    + G +RD         
Sbjct: 174  KAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVS 233

Query: 648  XXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGGFDLG 827
               EHGF  HAE   K  A E+FP+E IC+ LI+GWC  GKL+EARRL  E+ RGGF++G
Sbjct: 234  KLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGFEIG 293

Query: 828  TPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKIRMTE 1007
            T AYN+ILDC+C+LCRKKDP RL+ EAEKIL++M+ +G+PR+ ETF VLI+NLCKIR TE
Sbjct: 294  TMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVLITNLCKIRKTE 353

Query: 1008 DAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRKAYYG 1187
            DAMK F RM EWGC P+  T+L L RSLYQAARV EGDEM+  M+SAGFG+ LD+KAYY 
Sbjct: 354  DAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGFGNALDKKAYYE 413

Query: 1188 FVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEAVARR 1367
            F+KILCGIER++HAM +F  MK  G  PG+K+Y LL+ KL  H + D+ANALF EAV R 
Sbjct: 414  FIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKANALFSEAVNRG 473

Query: 1368 VPVTPKVY-XXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKKNRMA 1538
            VPV  K Y                  R T  EKMA           SFVKKPK+ R A
Sbjct: 474  VPVESKAYKLDPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLSFVKKPKRMRRA 531


>ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial-like [Solanum tuberosum]
          Length = 521

 Score =  424 bits (1089), Expect = e-116
 Identities = 219/415 (52%), Positives = 267/415 (64%), Gaps = 2/415 (0%)
 Frame = +3

Query: 288  LHFSDVRFNTSLLAEILNLSHEAGRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGRRKDF 467
            L FS V    SL+   LNLS +AGR+V+  ++W+    SF   D  +S  V + GRRKDF
Sbjct: 101  LSFSHVNLTPSLILTTLNLSPDAGRTVLGFFKWVKSKESFKVDDEVVSYFVDYFGRRKDF 160

Query: 468  KAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXXXXXX 647
            KA   +L +     G     + ++RL RAGR TQ + FF+    + G+ RD         
Sbjct: 161  KAAQDVLIDGIGLAGRKTLESMVDRLVRAGRSTQTVAFFENMEKDYGLVRDLDSLKLVVS 220

Query: 648  XXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGGFDLG 827
               EHGF  +AE   K  A+E FPDE IC+ LIRGWC  GKL+EA+RL GE+ RGGF++G
Sbjct: 221  RLCEHGFASYAEKMVKSLASEFFPDEYICDMLIRGWCIDGKLDEAQRLAGEMYRGGFEIG 280

Query: 828  TPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKIRMTE 1007
              AYNAILDCVC+LCRKKDP RLQ EAE +LLEME  G+PRD ETF VLI+NLCKIR TE
Sbjct: 281  ASAYNAILDCVCKLCRKKDPFRLQSEAENVLLEMEEKGVPRDVETFNVLITNLCKIRKTE 340

Query: 1008 DAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRKAYYG 1187
            DA+  F RM EWGC+PD  T+L LIRSLYQAARV EGDEM+  M+SAGFGD LD+KAYY 
Sbjct: 341  DALNLFYRMGEWGCNPDETTFLTLIRSLYQAARVGEGDEMIDRMKSAGFGDALDKKAYYE 400

Query: 1188 FVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEAVARR 1367
            F+KILCGIER++HAM VF  MK  G  PG+K+Y LLI K+  HN+ D+ANAL+KEA +  
Sbjct: 401  FLKILCGIERLDHAMSVFAKMKEDGCKPGLKTYDLLIGKMVAHNRVDKANALYKEAESNE 460

Query: 1368 VPVTPKVY--XXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKK 1526
            + V PK Y                   R TF EKMA           S+VKKPKK
Sbjct: 461  LAVEPKAYMVHPKYAKKKSAPAKKEKKRETFPEKMARKRTKLKKIRLSYVKKPKK 515


>ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Solanum lycopersicum]
          Length = 522

 Score =  422 bits (1086), Expect = e-115
 Identities = 219/416 (52%), Positives = 266/416 (63%), Gaps = 3/416 (0%)
 Frame = +3

Query: 288  LHFSDVRFNTSLLAEILNLSHEAGRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGRRKDF 467
            L FS V    SL+   LNLS +AGR+V+  ++W+    SF   D  +S  V + GRRKDF
Sbjct: 101  LSFSHVNLTPSLILTTLNLSPDAGRTVLGFFKWVKSKESFKVDDEVVSCFVDYFGRRKDF 160

Query: 468  KAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXXXXXX 647
            KA   +L +     G     + ++RL RAGR TQ + FF+    + G+ RD         
Sbjct: 161  KAAQDVLIDGIGLTGRKTLESMVDRLVRAGRPTQTVAFFENMEKDYGLARDLDSLKLVVS 220

Query: 648  XXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGGFDLG 827
               EHGF  +AE   K  A E FPDE IC+ L+RGWC  GKL+EA+RL GE+ RGGF++G
Sbjct: 221  RLCEHGFASYAEKMVKSLACEFFPDEYICDMLVRGWCIDGKLDEAQRLAGEMYRGGFEIG 280

Query: 828  TPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKIRMTE 1007
              AYNAILDCVC+LCRKKDP RLQ EAE +LLEME  G+PRD ETF VLI+NLCKIR TE
Sbjct: 281  ASAYNAILDCVCKLCRKKDPFRLQSEAENVLLEMEEKGVPRDVETFNVLITNLCKIRKTE 340

Query: 1008 DAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRKAYYG 1187
            DA+  F RM EWGC+PD  T+L LIRSLYQAARV EGDEM+  MRSAGFGD LD+KAYY 
Sbjct: 341  DALNLFYRMGEWGCNPDETTFLTLIRSLYQAARVGEGDEMIDRMRSAGFGDALDKKAYYE 400

Query: 1188 FVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEAVARR 1367
            F+KILCGIER++HAM VF  MK  G  PG+K+Y LLI K+  HN+ D+ANAL+KEA +  
Sbjct: 401  FLKILCGIERLDHAMSVFAKMKEDGCKPGLKTYDLLIGKMVAHNRVDKANALYKEAESND 460

Query: 1368 VPVTPKVY---XXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKK 1526
            + V PK Y                    R TF EKMA           S+VKKPKK
Sbjct: 461  LAVEPKAYMVHPKYAKKKSAPAKKEEKKRETFPEKMARKRTKLKKIRLSYVKKPKK 516


>ref|XP_006658781.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial-like [Oryza brachyantha]
          Length = 349

 Score =  422 bits (1084), Expect = e-115
 Identities = 215/350 (61%), Positives = 247/350 (70%)
 Frame = +3

Query: 486  LSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXXXXXXXXXEHG 665
            + EF   +GP    A L RLA AGR T AL+ FD  P +L   R               G
Sbjct: 1    MEEFPSALGPATLDAYLLRLASAGRPTDALKVFDELPQQL---RTREALTSLVSALSAEG 57

Query: 666  FPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGGFDLGTPAYNA 845
            +P HAE A K+ A E+FPD+ IC  L+ G+ NAGKL+ A RL+GE  RGGF  G  AYNA
Sbjct: 58   WPSHAERAVKKVANEIFPDDNICTFLVSGYANAGKLDHALRLIGETRRGGFQPGLDAYNA 117

Query: 846  ILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKIRMTEDAMKTF 1025
            +LDC+CRLCRKKDPLR+  EAEK L++MEA+GIPR+A TFRVLI+NLCKIR TEDAM  F
Sbjct: 118  VLDCICRLCRKKDPLRMPAEAEKFLVDMEANGIPRNAGTFRVLITNLCKIRKTEDAMNLF 177

Query: 1026 RRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRKAYYGFVKILC 1205
            RRM EWGCSPDA+TYL L++SLYQAAR+SEGDEM+ WMRSAGFGD+LDRKAYYGF+KILC
Sbjct: 178  RRMGEWGCSPDADTYLVLVKSLYQAARISEGDEMMTWMRSAGFGDKLDRKAYYGFIKILC 237

Query: 1206 GIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEAVARRVPVTPK 1385
            GIERVEHA+KVFRMMKGYGHAPG KSYSLLIEKLA HN GDRANALF+EAVAR V VTP 
Sbjct: 238  GIERVEHAVKVFRMMKGYGHAPGTKSYSLLIEKLARHNLGDRANALFREAVARGVTVTPG 297

Query: 1386 VYXXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKKNRM 1535
            VY                 R T  EKM            SFVKKP++  +
Sbjct: 298  VYKIDKKYVKVKKEKKLKKRPTLPEKMRLKSKRLYKLRMSFVKKPRRRML 347


>ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Cucumis sativus]
            gi|449477122|ref|XP_004154936.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Cucumis sativus]
          Length = 522

 Score =  419 bits (1076), Expect = e-114
 Identities = 214/414 (51%), Positives = 268/414 (64%), Gaps = 1/414 (0%)
 Frame = +3

Query: 288  LHFSDVRFNTSLLAEILNLSHEAGRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGRRKDF 467
            L FS V+ N  L+   LNLS EAGR+V+    W+V    F  +D ++S  V F GRRKDF
Sbjct: 103  LSFSHVKPNPELVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDF 162

Query: 468  KAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXXXXXX 647
             A+  +L++     GP   ++S+ R ARAGR T+ + FF+   T  G++RD         
Sbjct: 163  NAVQEVLAKGLGINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVE 222

Query: 648  XXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGGFDLG 827
               E+GF  HAE   K  A E FPDE IC+ LI+GWC   KL+EA+RL GE+ RGGF+LG
Sbjct: 223  KLCENGFGSHAEKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELG 282

Query: 828  TPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKIRMTE 1007
            T AYNA+LDCVC+LCRKKDP RL  EAE+IL+EM+  G+PR+ ETF VLI+NLCKIR T 
Sbjct: 283  TTAYNALLDCVCKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTT 342

Query: 1008 DAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRKAYYG 1187
            DA+  F RM EWGC P+AET+L LIRSLYQAAR  EGDEM+  M+S G+GD LD+KAYY 
Sbjct: 343  DAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYE 402

Query: 1188 FVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEAVARR 1367
            F+ ILCGIER++HA+ VF  MK  G  PG+K+Y LL+ KL  HN+ D+AN+LF EA  R 
Sbjct: 403  FMNILCGIERIDHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRG 462

Query: 1368 VPVTPKVY-XXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKK 1526
            VPVTPK Y                  R T  EKMA           SFVKKP++
Sbjct: 463  VPVTPKAYQVDPKYVKKPKDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRR 516


>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score =  417 bits (1073), Expect = e-114
 Identities = 205/417 (49%), Positives = 276/417 (66%), Gaps = 3/417 (0%)
 Frame = +3

Query: 285  SLHFSDVR--FNTSLLAEILNLSHEAGRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGRR 458
            +LHFS +      S++ + LNLS +AGR+V+  ++W+V+  +F  +D ++S  + + GRR
Sbjct: 147  NLHFSHINNSITPSIILQTLNLSPDAGRTVLGFHQWLVKVANFKNTDETISFFIDYFGRR 206

Query: 459  KDFKAIDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXXX 638
            KDF++   LL + +  +G   F + + RL RAGR T+ + FFD    + G +RD      
Sbjct: 207  KDFQSTHELLCDSKDVIGYKCFESMVNRLVRAGRATKVMGFFDRMERDYGFKRDRENLRL 266

Query: 639  XXXXXXEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGGF 818
                  ++G+  +AE   K  A E+FPDE IC+ LI+GWC  GKL+EA+RL GE+ RGGF
Sbjct: 267  VVKMLCDNGYASYAEKMVKNLANEIFPDENICDLLIKGWCVDGKLDEAKRLAGEMYRGGF 326

Query: 819  DLGTPAYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKIR 998
            ++GT AYNAILDCVC+LCR+KDP +++ E EK+L+EM+  G+PR+ ETF VLI+NLCK+R
Sbjct: 327  EIGTVAYNAILDCVCKLCREKDPFKIESEVEKVLVEMDTRGVPRNVETFNVLITNLCKMR 386

Query: 999  MTEDAMKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRKA 1178
             T+DA+  F RM EWGC PD  T+L LIRSLYQAARV EGDEM+  M+S+G+G++LD+KA
Sbjct: 387  KTQDALNLFNRMREWGCDPDDTTFLVLIRSLYQAARVGEGDEMIDRMKSSGYGNKLDKKA 446

Query: 1179 YYGFVKILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEAV 1358
            YYGF+KILCGIER+EHA+ VF MMK  G  PG+K+Y LLI K  T N+ D+ NALF EA+
Sbjct: 447  YYGFLKILCGIERLEHAVSVFEMMKADGCKPGIKTYDLLIGKWCTRNRVDKGNALFNEAL 506

Query: 1359 ARRVPVTPKVY-XXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKK 1526
               VPV PK Y                  R T  EKMA           SFVKKPKK
Sbjct: 507  RNGVPVAPKEYKVDEKYMKKPKAVKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKK 563


>ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 517

 Score =  417 bits (1071), Expect = e-113
 Identities = 212/411 (51%), Positives = 266/411 (64%)
 Frame = +3

Query: 294  FSDVRFNTSLLAEILNLSHEAGRSVIDLYRWIVRYRSFTPSDASLSLVVHFLGRRKDFKA 473
            F +V    SL+  +LNLS EAGR+V+   +W++    F  +D +LS  V + GRRKDFKA
Sbjct: 101  FPNVTPTPSLVLSVLNLSAEAGRAVLGFNQWLIHNPRFDHTDETLSYFVDYFGRRKDFKA 160

Query: 474  IDSLLSEFRRTVGPLAFRASLERLARAGRHTQALRFFDAAPTELGIQRDXXXXXXXXXXX 653
               ++   R   GP    AS++RL RAGR  QA+  F+    E GI+RD           
Sbjct: 161  THDVILSSRDVAGPKTLAASIDRLVRAGRPAQAVSMFEKMEEEYGIKRDKAALRLVVEKL 220

Query: 654  XEHGFPGHAEGAAKQYATEVFPDEGICNALIRGWCNAGKLEEARRLMGEIIRGGFDLGTP 833
             E+GF  +AE   K    E FPDE +C+ LI+GWC  GKL+EARRL GE+ RGGF++GT 
Sbjct: 221  CEYGFASNAEKMVKGLVNEFFPDEYMCDLLIKGWCVDGKLDEARRLAGEMYRGGFEIGTS 280

Query: 834  AYNAILDCVCRLCRKKDPLRLQHEAEKILLEMEASGIPRDAETFRVLISNLCKIRMTEDA 1013
            A+NAILDCVC+LCRKKDP RL  EAE+IL++M+  G+PR+ ETF VLI+NLCKIR T DA
Sbjct: 281  AFNAILDCVCKLCRKKDPFRLHSEAEQILVDMDYHGVPRNVETFNVLITNLCKIRKTNDA 340

Query: 1014 MKTFRRMSEWGCSPDAETYLALIRSLYQAARVSEGDEMVGWMRSAGFGDQLDRKAYYGFV 1193
            +  F RM EWGCSP+  T+L L RSLYQAARV EGDEM+  M+SAGFG+ LD+KAY+GF+
Sbjct: 341  LNLFHRMGEWGCSPNETTFLELTRSLYQAARVGEGDEMIDRMKSAGFGEALDKKAYFGFL 400

Query: 1194 KILCGIERVEHAMKVFRMMKGYGHAPGVKSYSLLIEKLATHNQGDRANALFKEAVARRVP 1373
            KILCGIER++HA+ VF+ MK  G  PG+K+Y LL+ KL   N+ DRA ALF EA  + VP
Sbjct: 401  KILCGIERIDHALSVFKKMKQDGCEPGIKTYDLLMGKLYAQNRADRATALFNEAQKKEVP 460

Query: 1374 VTPKVYXXXXXXXXXXXXXXXXXRLTFSEKMAXXXXXXXXXXXSFVKKPKK 1526
            VT K Y                 R T  EKMA           SFVKKPKK
Sbjct: 461  VTHKTYQVDSKYLKKPKAKKENTRETLPEKMARKRRRLKQIRLSFVKKPKK 511