BLASTX nr result

ID: Zingiber23_contig00011840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00011840
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004981288.1| PREDICTED: transcription elongation factor A...   130   2e-28
ref|XP_004160740.1| PREDICTED: transcription elongation factor A...   130   2e-28
ref|XP_004138392.1| PREDICTED: transcription elongation factor A...   130   2e-28
ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group] g...   130   2e-28
gb|AAR01752.1| putative transcription elongation factor, 5'-part...   130   2e-28
ref|XP_006657572.1| PREDICTED: transcription elongation factor A...   128   7e-28
dbj|BAC20918.1| putative transcription elongation factor [Oryza ...   128   7e-28
gb|EAZ03281.1| hypothetical protein OsI_25427 [Oryza sativa Indi...   128   7e-28
ref|NP_001059227.1| Os07g0229700 [Oryza sativa Japonica Group] g...   128   7e-28
ref|XP_006650790.1| PREDICTED: transcription elongation factor S...   128   9e-28
emb|CBI18026.3| unnamed protein product [Vitis vinifera]              128   9e-28
ref|XP_002272768.1| PREDICTED: transcription elongation factor A...   128   9e-28
tpg|DAA52141.1| TPA: hypothetical protein ZEAMMB73_289702 [Zea m...   127   1e-27
ref|XP_003563821.1| PREDICTED: transcription elongation factor A...   127   1e-27
ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea ma...   127   1e-27
ref|XP_002463654.1| hypothetical protein SORBIDRAFT_01g003660 [S...   126   3e-27
ref|XP_002323085.2| hypothetical protein POPTR_0016s14510g [Popu...   125   6e-27
gb|AFW67200.1| hypothetical protein ZEAMMB73_561219 [Zea mays]        125   6e-27
gb|ACN41014.1| unknown [Picea sitchensis]                             125   6e-27
ref|NP_001149284.1| transcription elongation factor A protein 2 ...   125   6e-27

>ref|XP_004981288.1| PREDICTED: transcription elongation factor A protein 3-like
           [Setaria italica]
          Length = 368

 Score =  130 bits (326), Expect = 2e-28
 Identities = 56/57 (98%), Positives = 56/57 (98%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCERGGAPKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 312 LFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 368


>ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
           [Cucumis sativus]
          Length = 290

 Score =  130 bits (326), Expect = 2e-28
 Identities = 56/57 (98%), Positives = 56/57 (98%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCERGGAPKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 234 LFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 290


>ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
           [Cucumis sativus]
          Length = 369

 Score =  130 bits (326), Expect = 2e-28
 Identities = 56/57 (98%), Positives = 56/57 (98%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCERGGAPKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 313 LFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 369


>ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group]
           gi|28876018|gb|AAO60027.1| putative transcription
           elongation factor [Oryza sativa Japonica Group]
           gi|108711747|gb|ABF99542.1| transcription elongation
           factor S-II family protein, expressed [Oryza sativa
           Japonica Group] gi|113550158|dbj|BAF13601.1|
           Os03g0815900 [Oryza sativa Japonica Group]
           gi|125546195|gb|EAY92334.1| hypothetical protein
           OsI_14059 [Oryza sativa Indica Group]
           gi|125588382|gb|EAZ29046.1| hypothetical protein
           OsJ_13099 [Oryza sativa Japonica Group]
          Length = 367

 Score =  130 bits (326), Expect = 2e-28
 Identities = 56/57 (98%), Positives = 56/57 (98%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCERGGAPKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 311 LFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 367


>gb|AAR01752.1| putative transcription elongation factor, 5'-partial [Oryza sativa
           Japonica Group]
          Length = 315

 Score =  130 bits (326), Expect = 2e-28
 Identities = 56/57 (98%), Positives = 56/57 (98%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCERGGAPKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 259 LFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 315


>ref|XP_006657572.1| PREDICTED: transcription elongation factor A protein 3-like [Oryza
           brachyantha]
          Length = 369

 Score =  128 bits (322), Expect = 7e-28
 Identities = 55/57 (96%), Positives = 56/57 (98%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LF+CERGGAPKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 313 LFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 369


>dbj|BAC20918.1| putative transcription elongation factor [Oryza sativa Japonica
           Group] gi|125599607|gb|EAZ39183.1| hypothetical protein
           OsJ_23609 [Oryza sativa Japonica Group]
          Length = 373

 Score =  128 bits (322), Expect = 7e-28
 Identities = 55/57 (96%), Positives = 56/57 (98%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LF+CERGGAPKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 317 LFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 373


>gb|EAZ03281.1| hypothetical protein OsI_25427 [Oryza sativa Indica Group]
          Length = 373

 Score =  128 bits (322), Expect = 7e-28
 Identities = 55/57 (96%), Positives = 56/57 (98%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LF+CERGGAPKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 317 LFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 373


>ref|NP_001059227.1| Os07g0229700 [Oryza sativa Japonica Group]
           gi|113610763|dbj|BAF21141.1| Os07g0229700 [Oryza sativa
           Japonica Group] gi|215737106|dbj|BAG96035.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 379

 Score =  128 bits (322), Expect = 7e-28
 Identities = 55/57 (96%), Positives = 56/57 (98%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LF+CERGGAPKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 323 LFECERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 379


>ref|XP_006650790.1| PREDICTED: transcription elongation factor S-II-like [Oryza
           brachyantha]
          Length = 367

 Score =  128 bits (321), Expect = 9e-28
 Identities = 55/57 (96%), Positives = 55/57 (96%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCERGG PKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 311 LFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 367


>emb|CBI18026.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  128 bits (321), Expect = 9e-28
 Identities = 55/57 (96%), Positives = 55/57 (96%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCERGG PKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 266 LFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 322


>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
           vinifera]
          Length = 367

 Score =  128 bits (321), Expect = 9e-28
 Identities = 55/57 (96%), Positives = 55/57 (96%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCERGG PKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 311 LFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 367


>tpg|DAA52141.1| TPA: hypothetical protein ZEAMMB73_289702 [Zea mays]
          Length = 318

 Score =  127 bits (320), Expect = 1e-27
 Identities = 55/57 (96%), Positives = 55/57 (96%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCERG APKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 262 LFDCERGAAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 318


>ref|XP_003563821.1| PREDICTED: transcription elongation factor A protein 2-like
           [Brachypodium distachyon]
          Length = 364

 Score =  127 bits (320), Expect = 1e-27
 Identities = 55/57 (96%), Positives = 55/57 (96%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCER GAPKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 308 LFDCERAGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 364


>ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea mays]
           gi|194688540|gb|ACF78354.1| unknown [Zea mays]
           gi|194707892|gb|ACF88030.1| unknown [Zea mays]
          Length = 367

 Score =  127 bits (320), Expect = 1e-27
 Identities = 55/57 (96%), Positives = 55/57 (96%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCERG APKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 311 LFDCERGAAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 367


>ref|XP_002463654.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
           gi|241917508|gb|EER90652.1| hypothetical protein
           SORBIDRAFT_01g003660 [Sorghum bicolor]
          Length = 368

 Score =  126 bits (316), Expect = 3e-27
 Identities = 54/57 (94%), Positives = 55/57 (96%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LF+CER GAPKATTDQFKCGRCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 312 LFECERAGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 368


>ref|XP_002323085.2| hypothetical protein POPTR_0016s14510g [Populus trichocarpa]
           gi|550321508|gb|EEF04846.2| hypothetical protein
           POPTR_0016s14510g [Populus trichocarpa]
          Length = 339

 Score =  125 bits (314), Expect = 6e-27
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCERGG  +ATTDQFKCGRCGQRKCTYYQ+QTRSADEPMTT+VTCVNCNNHWKFC
Sbjct: 283 LFDCERGGKAEATTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWKFC 339


>gb|AFW67200.1| hypothetical protein ZEAMMB73_561219 [Zea mays]
          Length = 246

 Score =  125 bits (314), Expect = 6e-27
 Identities = 54/57 (94%), Positives = 54/57 (94%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCERG APKATTDQFKC RCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 190 LFDCERGAAPKATTDQFKCARCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 246


>gb|ACN41014.1| unknown [Picea sitchensis]
          Length = 328

 Score =  125 bits (314), Expect = 6e-27
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LF+CERG  PKATTDQFKCG+CGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 272 LFECERGIKPKATTDQFKCGKCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 328


>ref|NP_001149284.1| transcription elongation factor A protein 2 [Zea mays]
           gi|195626030|gb|ACG34845.1| transcription elongation
           factor A protein 2 [Zea mays]
          Length = 368

 Score =  125 bits (314), Expect = 6e-27
 Identities = 54/57 (94%), Positives = 54/57 (94%)
 Frame = -3

Query: 332 LFDCERGGAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 162
           LFDCERG APKATTDQFKC RCGQRK TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 312 LFDCERGAAPKATTDQFKCARCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 368


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