BLASTX nr result

ID: Zingiber23_contig00011823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00011823
         (247 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX96861.1| RNA-binding (RRM/RBD/RNP motifs) family protein, ...    55   7e-06
gb|EXB66987.1| Glycine-rich RNA-binding protein 2 [Morus notabilis]    55   1e-05

>gb|EOX96861.1| RNA-binding (RRM/RBD/RNP motifs) family protein, putative
           [Theobroma cacao]
          Length = 147

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = -3

Query: 119 PLASRIFVRNLPYSTGEATLIKLFSKFGQIVEIKLAREE 3
           PLASRIFVRNLPY+T E++L K F+ FGQI E+KL +++
Sbjct: 34  PLASRIFVRNLPYTTKESSLQKEFANFGQIAEVKLVKDD 72


>gb|EXB66987.1| Glycine-rich RNA-binding protein 2 [Morus notabilis]
          Length = 157

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = -3

Query: 119 PLASRIFVRNLPYSTGEATLIKLFSKFGQIVEIKLAREE 3
           PLASRI VRNLPYST E +L++ FS FGQI E+KL +++
Sbjct: 44  PLASRIIVRNLPYSTSERSLLENFSNFGQIAEVKLIKDK 82


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