BLASTX nr result

ID: Zingiber23_contig00011517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00011517
         (260 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517619.1| dead box ATP-dependent RNA helicase, putativ...   167   1e-39
gb|EPS66777.1| hypothetical protein M569_07999 [Genlisea aurea]       165   7e-39
ref|XP_004960989.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   165   7e-39
ref|XP_004960988.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   165   7e-39
ref|XP_004960987.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   165   7e-39
gb|EMT19211.1| DEAD-box ATP-dependent RNA helicase 56 [Aegilops ...   165   7e-39
gb|EMS68248.1| DEAD-box ATP-dependent RNA helicase 56 [Triticum ...   165   7e-39
gb|AFW81346.1| hypothetical protein ZEAMMB73_015937 [Zea mays]        165   7e-39
gb|AFW81342.1| spliceosome RNA helicase BAT1 isoform 1 [Zea mays...   165   7e-39
ref|XP_003569187.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   165   7e-39
ref|XP_003569186.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   165   7e-39
ref|XP_003569181.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   165   7e-39
ref|XP_004968948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   164   9e-39
ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   164   1e-38
ref|NP_001141599.1| uncharacterized protein LOC100273717 [Zea ma...   164   1e-38
gb|EOY29499.1| DEAD/DEAH box RNA helicase family protein isoform...   164   2e-38
gb|EOY29498.1| DEAD/DEAH box RNA helicase family protein isoform...   164   2e-38
gb|EOY29497.1| DEAD/DEAH box RNA helicase family protein isoform...   164   2e-38
gb|EMS64048.1| DEAD-box ATP-dependent RNA helicase 56 [Triticum ...   164   2e-38
ref|XP_006644282.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   163   2e-38

>ref|XP_002517619.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223543251|gb|EEF44783.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 427

 Score =  167 bits (423), Expect = 1e-39
 Identities = 84/86 (97%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGMSQEERLTKYKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 318 IHSGMSQEERLTKYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 377

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 378 RAGRFGTKGLAITFVSSASDSDVLNQ 403


>gb|EPS66777.1| hypothetical protein M569_07999 [Genlisea aurea]
          Length = 220

 Score =  165 bits (417), Expect = 7e-39
 Identities = 83/86 (96%), Positives = 84/86 (97%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGMSQEERLT+YK FKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 111 IHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 170

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSAADSDVLNQ
Sbjct: 171 RAGRFGTKGLAITFVSSAADSDVLNQ 196


>ref|XP_004960989.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X3
           [Setaria italica]
          Length = 371

 Score =  165 bits (417), Expect = 7e-39
 Identities = 82/86 (95%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 235 IHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 294

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 295 RAGRFGTKGLAITFVSSASDSDVLNQ 320


>ref|XP_004960988.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X2
           [Setaria italica]
          Length = 429

 Score =  165 bits (417), Expect = 7e-39
 Identities = 82/86 (95%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 320 IHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 379

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 380 RAGRFGTKGLAITFVSSASDSDVLNQ 405


>ref|XP_004960987.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X1
           [Setaria italica]
          Length = 456

 Score =  165 bits (417), Expect = 7e-39
 Identities = 82/86 (95%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 320 IHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 379

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 380 RAGRFGTKGLAITFVSSASDSDVLNQ 405


>gb|EMT19211.1| DEAD-box ATP-dependent RNA helicase 56 [Aegilops tauschii]
          Length = 551

 Score =  165 bits (417), Expect = 7e-39
 Identities = 82/86 (95%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 284 IHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 343

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 344 RAGRFGTKGLAITFVSSASDSDVLNQ 369


>gb|EMS68248.1| DEAD-box ATP-dependent RNA helicase 56 [Triticum urartu]
          Length = 657

 Score =  165 bits (417), Expect = 7e-39
 Identities = 82/86 (95%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 374 IHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 433

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 434 RAGRFGTKGLAITFVSSASDSDVLNQ 459


>gb|AFW81346.1| hypothetical protein ZEAMMB73_015937 [Zea mays]
          Length = 344

 Score =  165 bits (417), Expect = 7e-39
 Identities = 82/86 (95%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 235 IHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 294

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 295 RAGRFGTKGLAITFVSSASDSDVLNQ 320


>gb|AFW81342.1| spliceosome RNA helicase BAT1 isoform 1 [Zea mays]
           gi|413948694|gb|AFW81343.1| spliceosome RNA helicase
           BAT1 isoform 2 [Zea mays] gi|413948695|gb|AFW81344.1|
           spliceosome RNA helicase BAT1 isoform 3 [Zea mays]
          Length = 429

 Score =  165 bits (417), Expect = 7e-39
 Identities = 82/86 (95%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 320 IHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 379

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 380 RAGRFGTKGLAITFVSSASDSDVLNQ 405


>ref|XP_003569187.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like
           [Brachypodium distachyon]
          Length = 428

 Score =  165 bits (417), Expect = 7e-39
 Identities = 82/86 (95%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 319 IHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 378

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 379 RAGRFGTKGLAITFVSSASDSDVLNQ 404


>ref|XP_003569186.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like
           [Brachypodium distachyon]
          Length = 429

 Score =  165 bits (417), Expect = 7e-39
 Identities = 82/86 (95%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 320 IHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 379

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 380 RAGRFGTKGLAITFVSSASDSDVLNQ 405


>ref|XP_003569181.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like
           [Brachypodium distachyon]
          Length = 428

 Score =  165 bits (417), Expect = 7e-39
 Identities = 82/86 (95%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 319 IHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 378

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 379 RAGRFGTKGLAITFVSSASDSDVLNQ 404


>ref|XP_004968948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 15-like isoform X2
           [Setaria italica]
          Length = 429

 Score =  164 bits (416), Expect = 9e-39
 Identities = 81/86 (94%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIV+NYDMPDSADTYLHRVG
Sbjct: 320 IHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVVNYDMPDSADTYLHRVG 379

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 380 RAGRFGTKGLAITFVSSASDSDVLNQ 405


>ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Vitis vinifera]
           gi|297743441|emb|CBI36308.3| unnamed protein product
           [Vitis vinifera]
          Length = 428

 Score =  164 bits (415), Expect = 1e-38
 Identities = 82/86 (95%), Positives = 84/86 (97%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 319 IHSGMPQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 378

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 379 RAGRFGTKGLAITFVSSASDSDVLNQ 404


>ref|NP_001141599.1| uncharacterized protein LOC100273717 [Zea mays]
           gi|224032233|gb|ACN35192.1| unknown [Zea mays]
          Length = 429

 Score =  164 bits (415), Expect = 1e-38
 Identities = 82/86 (95%), Positives = 84/86 (97%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 320 IHSGMTQEERLTSYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 379

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 380 RAGRFGTKGLAITFVSSASDSDVLNQ 405


>gb|EOY29499.1| DEAD/DEAH box RNA helicase family protein isoform 3 [Theobroma
           cacao]
          Length = 429

 Score =  164 bits (414), Expect = 2e-38
 Identities = 82/86 (95%), Positives = 84/86 (97%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGMSQEERLT+YK FKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 319 IHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 378

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 379 RAGRFGTKGLAITFVSSASDSDVLNQ 404


>gb|EOY29498.1| DEAD/DEAH box RNA helicase family protein isoform 2 [Theobroma
           cacao]
          Length = 428

 Score =  164 bits (414), Expect = 2e-38
 Identities = 82/86 (95%), Positives = 84/86 (97%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGMSQEERLT+YK FKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 319 IHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 378

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 379 RAGRFGTKGLAITFVSSASDSDVLNQ 404


>gb|EOY29497.1| DEAD/DEAH box RNA helicase family protein isoform 1 [Theobroma
           cacao]
          Length = 485

 Score =  164 bits (414), Expect = 2e-38
 Identities = 82/86 (95%), Positives = 84/86 (97%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGMSQEERLT+YK FKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 376 IHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 435

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 436 RAGRFGTKGLAITFVSSASDSDVLNQ 461


>gb|EMS64048.1| DEAD-box ATP-dependent RNA helicase 56 [Triticum urartu]
          Length = 456

 Score =  164 bits (414), Expect = 2e-38
 Identities = 81/86 (94%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG
Sbjct: 317 IHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 376

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFV+SA+DSDVLNQ
Sbjct: 377 RAGRFGTKGLAITFVASASDSDVLNQ 402


>ref|XP_006644282.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 15-like [Oryza
           brachyantha]
          Length = 433

 Score =  163 bits (413), Expect = 2e-38
 Identities = 81/86 (94%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 IHSGMSQEERLTKYKNFKEGLKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 81
           IHSGM+QEERLT+YKNFKEG KRILVATDLVGRGIDIERVNIVINYDMPDSAD+YLHRVG
Sbjct: 324 IHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVG 383

Query: 80  RAGRFGTKGLAITFVSSAADSDVLNQ 3
           RAGRFGTKGLAITFVSSA+DSDVLNQ
Sbjct: 384 RAGRFGTKGLAITFVSSASDSDVLNQ 409


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