BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00011446
         (3563 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006826729.1| hypothetical protein AMTR_s00136p00027550 [A...  1141   0.0  
ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putativ...  1129   0.0  
gb|EOY18125.1| Dead box ATP-dependent RNA helicase, putative iso...  1123   0.0  
ref|XP_006422279.1| hypothetical protein CICLE_v10004206mg [Citr...  1121   0.0  
gb|EOY18124.1| P-loop containing nucleoside triphosphate hydrola...  1108   0.0  
ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1096   0.0  
ref|XP_002307002.2| hypothetical protein POPTR_0005s27880g [Popu...  1095   0.0  
ref|XP_002301895.1| DEAD/DEAH box helicase family protein [Popul...  1094   0.0  
gb|ESW29025.1| hypothetical protein PHAVU_002G037900g [Phaseolus...  1092   0.0  
ref|XP_006590453.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1091   0.0  
ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helica...  1088   0.0  
ref|XP_006306613.1| hypothetical protein CARUB_v10008128mg [Caps...  1083   0.0  
ref|NP_173516.1| DEAD Box RNA Helicase RCF1 [Arabidopsis thalian...  1069   0.0  
ref|XP_004295131.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1066   0.0  
ref|XP_006416348.1| hypothetical protein EUTSA_v10006608mg [Eutr...  1066   0.0  
ref|XP_002890415.1| hypothetical protein ARALYDRAFT_472328 [Arab...  1043   0.0  
ref|NP_001077571.1| DEAD Box RNA Helicase RCF1 [Arabidopsis thal...  1038   0.0  
ref|XP_006349887.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   957   0.0  
ref|XP_004252969.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   956   0.0  
gb|EXB56258.1| DEAD-box ATP-dependent RNA helicase 42 [Morus not...   946   0.0  

>ref|XP_006826729.1| hypothetical protein AMTR_s00136p00027550 [Amborella trichopoda]
            gi|548831149|gb|ERM93966.1| hypothetical protein
            AMTR_s00136p00027550 [Amborella trichopoda]
          Length = 1275

 Score = 1141 bits (2951), Expect = 0.0
 Identities = 607/909 (66%), Positives = 665/909 (73%), Gaps = 12/909 (1%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKEDEAMLGKNWTLEGE-SDDEDAPPKSDK 660
            +DKRRRRVQEWQ              G E  +E+    GKNWTLEGE SDDE++   S K
Sbjct: 367  MDKRRRRVQEWQELKRKREEQEREKRGEEKTEEEPPKSGKNWTLEGEESDDEESEHPSTK 426

Query: 661  DISVXXXXXXXXXXXXXXXXXXXXXXXXXXHIGTKXXXXXXXXXXXXXXXXX---AFMNS 831
              +                           +                        AFMNS
Sbjct: 427  TAAAASKGPVVPVANGDAKSDDPMMVDSEDNGNGNRHPLPDENGEEEGEEIDPLDAFMNS 486

Query: 832  MVLPEVEKLQSAEIAAKPHEKKGIM--TKASKEAFSNGDRLRKGEKNAMGRIIPGEDSDS 1005
            MVLPEVEKL++AE AA        +   KAS+E   NGD+ +K  KNA GRIIPGEDSDS
Sbjct: 487  MVLPEVEKLKNAEAAASTDNMLAELGKKKASREVLGNGDQSKKASKNATGRIIPGEDSDS 546

Query: 1006 DYXXXXXXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMS 1185
            DY                 F+KRVKKTKAEKLSIVDHSKIQYPPFRKN YIE+KEI+RM+
Sbjct: 547  DYEHMENDEAPLEDEDDDEFIKRVKKTKAEKLSIVDHSKIQYPPFRKNFYIEVKEISRMT 606

Query: 1186 TEEVSAYRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIM 1365
            TEEV+AYRK LELKIHGKDVP PIKTW+Q GL +KIL+TIKK +FEKPM IQAQALPIIM
Sbjct: 607  TEEVAAYRKMLELKIHGKDVPMPIKTWNQTGLTSKILETIKKSNFEKPMPIQAQALPIIM 666

Query: 1366 SGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKK 1545
            SGRDCIGIAKTGSGKTLAFVLPMLRHIKDQP VV G+GP+GL+MAPTRELVQQIH+DIKK
Sbjct: 667  SGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVPGDGPIGLIMAPTRELVQQIHSDIKK 726

Query: 1546 FAKPLNINCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLV 1725
            FAK + +NCVPVYGGSGVAQQIS+LKRGTEIVVCTPGRMIDILCTSGGKI+NLRRVT+LV
Sbjct: 727  FAKVVGVNCVPVYGGSGVAQQISDLKRGTEIVVCTPGRMIDILCTSGGKISNLRRVTYLV 786

Query: 1726 MDEADRMFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRS 1905
            MDEADRMFDMGFEPQITRI+QNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRS
Sbjct: 787  MDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRS 846

Query: 1906 VVNKDITQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCL 2085
            VVNKDITQLVEVR +++RFLRLLE+LGEWYEKGKIL+FVHSQ+KCD+LF++LL+H YPCL
Sbjct: 847  VVNKDITQLVEVRQDNERFLRLLELLGEWYEKGKILIFVHSQEKCDSLFKELLRHGYPCL 906

Query: 2086 SLHGAKDQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRV 2265
            SLHGAKDQTDRESTISDFK+NVCNLLIATSIAARGLDVKELELVVN+DVPNHYEDYVHRV
Sbjct: 907  SLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVVNYDVPNHYEDYVHRV 966

Query: 2266 GRTGRAGRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGTEQA 2445
            GRTGRAGRKGCA+TFI+ ED RYAPDLVKALELSEQAVP DLK +A+ FMAKVNQGTE A
Sbjct: 967  GRTGRAGRKGCAVTFITEEDARYAPDLVKALELSEQAVPDDLKQVADGFMAKVNQGTEHA 1026

Query: 2446 HGTGYGGSGFKFNXXXXXXXXXXXXXXXXXYGF--XXXXXXXXXXXXGIRKAGGDL---X 2610
            HGTGYGGSGFKFN                 YGF              G+RKAGGD+    
Sbjct: 1027 HGTGYGGSGFKFNEEEDEARRAAKKAQAREYGFEEDKSDSDSEEEGGGVRKAGGDISQAA 1086

Query: 2611 XXXXXXXXXXXXXXXXXXXXXMPTQVVTPLPF-TXXXXXXXXXXXXXXXXXPSVTALPGE 2787
                                 +P      LP  T                 P V  LP +
Sbjct: 1087 AFAQAAAIAAASKVAMTSSLSLPPVSSQFLPLQTTTAAGAGMGVLGAPPSLPVVGGLPND 1146

Query: 2788 XXXXXXXXXXXXXXXXXXXXXQAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWT 2967
                                 QA+AMPEHYEAELEINDFPQNARWK+THKETL PISEWT
Sbjct: 1147 AAARAAALAAALNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWT 1206

Query: 2968 GAAITTRGQYFPPGKIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGA 3147
            GAAITTRGQY+PPGKI GPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQ+L+L GA
Sbjct: 1207 GAAITTRGQYYPPGKIPGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQSLSLPGA 1266

Query: 3148 SQPGKYSVI 3174
             QPGKYSV+
Sbjct: 1267 GQPGKYSVL 1275


>ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 1173

 Score = 1129 bits (2919), Expect = 0.0
 Identities = 608/946 (64%), Positives = 663/946 (70%), Gaps = 13/946 (1%)
 Frame = +1

Query: 376  SEDSRRSRATDKESDXXXXXXXXXXXXXXXXXXXXXIDKRRRRVQEWQXXXXXXXXXXXX 555
            S+ S R ++ + E D                     ++KRRRRVQEWQ            
Sbjct: 239  SDGSPRKKSGEDELDKKEKKTREEELEDEQKRLDEEMEKRRRRVQEWQELRRKKEESERE 298

Query: 556  XXGSENGKEDEAMLGKNWTLEGESDDEDAPPKSDKDISVXXXXXXXXXXXXXXXXXXXXX 735
              G E    DE   GK WTLEGESDDE+AP     + ++                     
Sbjct: 299  KHG-EASNADEPQTGKTWTLEGESDDEEAPLAGKSETNMDLDENAKPDEEIGDAMVVDSY 357

Query: 736  XXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSMVLPEVEKLQSAEIAAKPHEKKGIMTKA 915
                    T                  AFMNSMVLPEVEKL +A I     E K +  K 
Sbjct: 358  NGT----ATSENGDNDVIEDEEIDPLDAFMNSMVLPEVEKLNNAVITETVDENK-VELKK 412

Query: 916  SKEAFSNGDRLRKGEKNAMGRIIPGEDSDSDYXXXXXXXXXXXXXXXXXFMKRVKKTKAE 1095
             KE  + G++L+KG   ++GRIIPGEDSDSDY                 FMKRVKKTKAE
Sbjct: 413  KKEEGNEGEKLKKGSNKSLGRIIPGEDSDSDYGDLENDEGPLDDEDDDEFMKRVKKTKAE 472

Query: 1096 KLSIVDHSKIQYPPFRKNLYIELKEIARMSTEEVSAYRKQLELKIHGKDVPKPIKTWSQA 1275
            KLS+VDHSKI Y PFRKN YIE+KEI+RM+ EEV+AYRKQLELKIHGKDVPKP+KTW Q 
Sbjct: 473  KLSVVDHSKIDYKPFRKNFYIEVKEISRMAPEEVAAYRKQLELKIHGKDVPKPVKTWHQT 532

Query: 1276 GLGTKILDTIKKLSFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQ 1455
            GL +KIL+TIKKL++EKPM IQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQ
Sbjct: 533  GLASKILETIKKLNYEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQ 592

Query: 1456 PEVVSGEGPVGLVMAPTRELVQQIHNDIKKFAKPLNINCVPVYGGSGVAQQISELKRGTE 1635
            P V +G+GP+GL+MAPTRELVQQIH+DIKKFAK L I CVPVYGGSGVAQQISELKRGTE
Sbjct: 593  PLVEAGDGPIGLIMAPTRELVQQIHSDIKKFAKVLGIRCVPVYGGSGVAQQISELKRGTE 652

Query: 1636 IVVCTPGRMIDILCTSGGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNTRPDRQTV 1815
            IVVCTPGRMIDILCTSGGKITNLRRVT+LVMDEADRMFDMGFEPQITRI+QN RPDRQTV
Sbjct: 653  IVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTV 712

Query: 1816 LFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLEILGEWY 1995
            LFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPES+RFLRLLE+LGEW 
Sbjct: 713  LFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESERFLRLLELLGEWN 772

Query: 1996 EKGKILVFVHSQDKCDALFRDLLKHSYPCLSLHGAKDQTDRESTISDFKNNVCNLLIATS 2175
            EKGKIL+FV SQDKCDALFRDLLKH YPCLSLHGAKDQTDRESTISDFK+NVCNLLIATS
Sbjct: 773  EKGKILIFVQSQDKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATS 832

Query: 2176 IAARGLDVKELELVVNFDVPNHYEDYVHRVGRTGRAGRKGCAITFISLEDERYAPDLVKA 2355
            IAARGLDVKEL+LVVNFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS ED RYAPDLVKA
Sbjct: 833  IAARGLDVKELDLVVNFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKA 892

Query: 2356 LELSEQAVPADLKALANAFMAKVNQGTEQAHGTGYGGSGFKFNXXXXXXXXXXXXXXXXX 2535
            LELSEQ VP DLKALA+ FM KVNQG EQAHGTGYGGSGFKFN                 
Sbjct: 893  LELSEQVVPEDLKALADGFMVKVNQGLEQAHGTGYGGSGFKFNEEEDEKRIAAKKAQAKE 952

Query: 2536 YGFXXXXXXXXXXXXGIRKAGGDLXXXXXXXXXXXXXXXXXXXXXXMPTQVVTPLPFTXX 2715
            YGF            GIRKAGGD+                        T   TP P T  
Sbjct: 953  YGFEEDKSDSEDEDEGIRKAGGDI----SRHNAALAQQLVAIAAASKSTTSATPTPITAG 1008

Query: 2716 XXXXXXXXXXXXXXXPSVTALPGEXXXXXXXXXXXXXXXXXXXXXQA------------- 2856
                             +T +PG                       A             
Sbjct: 1009 QLLPPGGLPVSLPGVIGLT-IPGPAAVVPGAGLPVINNDNTAKAIAAAINLQHNLAKIQA 1067

Query: 2857 EAMPEHYEAELEINDFPQNARWKITHKETLWPISEWTGAAITTRGQYFPPGKIVGPGERK 3036
            +AMPEHYEAELEINDFPQNARWK+THKETL PIS+WTGAAITTRGQ+FPPG+I GPGERK
Sbjct: 1068 DAMPEHYEAELEINDFPQNARWKVTHKETLGPISDWTGAAITTRGQFFPPGRIPGPGERK 1127

Query: 3037 LYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQPGKYSVI 3174
            LYLFIEGP+E+SVKKAKAE+KRVLED T QAL+L G +QPG+YSVI
Sbjct: 1128 LYLFIEGPSETSVKKAKAELKRVLEDITNQALSLPGGAQPGRYSVI 1173


>gb|EOY18125.1| Dead box ATP-dependent RNA helicase, putative isoform 2 [Theobroma
            cacao] gi|508726229|gb|EOY18126.1| Dead box ATP-dependent
            RNA helicase, putative isoform 2 [Theobroma cacao]
            gi|508726230|gb|EOY18127.1| Dead box ATP-dependent RNA
            helicase, putative isoform 2 [Theobroma cacao]
            gi|508726231|gb|EOY18128.1| Dead box ATP-dependent RNA
            helicase, putative isoform 2 [Theobroma cacao]
            gi|508726232|gb|EOY18129.1| Dead box ATP-dependent RNA
            helicase, putative isoform 2 [Theobroma cacao]
            gi|508726233|gb|EOY18130.1| Dead box ATP-dependent RNA
            helicase, putative isoform 2 [Theobroma cacao]
            gi|508726234|gb|EOY18131.1| Dead box ATP-dependent RNA
            helicase, putative isoform 2 [Theobroma cacao]
            gi|508726235|gb|EOY18132.1| Dead box ATP-dependent RNA
            helicase, putative isoform 2 [Theobroma cacao]
            gi|508726236|gb|EOY18133.1| Dead box ATP-dependent RNA
            helicase, putative isoform 2 [Theobroma cacao]
            gi|508726237|gb|EOY18134.1| Dead box ATP-dependent RNA
            helicase, putative isoform 2 [Theobroma cacao]
          Length = 1104

 Score = 1124 bits (2906), Expect = 0.0
 Identities = 593/915 (64%), Positives = 664/915 (72%), Gaps = 18/915 (1%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKEDEAMLGKNWTLEGESDDED-APPKSDK 660
            ++KRRRRVQEWQ              G  N +++E  +GK WTLEGESDD++ AP K + 
Sbjct: 190  MEKRRRRVQEWQELRRKKEESEREKRGEGNAEDEETKVGKAWTLEGESDDDEVAPTKLET 249

Query: 661  DISVXXXXXXXXXXXXXXXXXXXXXXXXXXH-----IGTKXXXXXXXXXXXXXXXXXAFM 825
            ++ V                          +     + T+                 AFM
Sbjct: 250  NMDVDENENSNSKPDSKGIGDAMMEDGDSDNGEDKMLVTQNGGNGISEEDDEIDPLDAFM 309

Query: 826  NSMVLPEVEKLQSAEIA---AKPHEKKGIMTKASKEAFSNGDRL-RKGEKNAMGRIIPGE 993
            NSMVLPEVEKL +A +        +K G + K  K+  SNG +  +KG   A+GRIIPGE
Sbjct: 310  NSMVLPEVEKLSNAVVVPPTTADDDKNGNLKKDKKDGLSNGGQQPKKGSNKALGRIIPGE 369

Query: 994  DSDSDYXXXXXXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEI 1173
            DSDSDY                 FMKRVKKTKAEKLSIVDHSKI Y PFRKN YIE+KEI
Sbjct: 370  DSDSDYGDFENDEEDLEDEDDDEFMKRVKKTKAEKLSIVDHSKIDYKPFRKNFYIEVKEI 429

Query: 1174 ARMSTEEVSAYRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQAL 1353
            +RM+ EEV+AYRK+LELK+HGKDVPKP+KTW Q GL +KIL+TI+KL++EKPM IQAQAL
Sbjct: 430  SRMTPEEVAAYRKELELKLHGKDVPKPVKTWHQTGLTSKILETIRKLNYEKPMPIQAQAL 489

Query: 1354 PIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHN 1533
            PIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQP VV+G+GP+GL+MAPTRELVQQIH+
Sbjct: 490  PIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHS 549

Query: 1534 DIKKFAKPLNINCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRV 1713
            DIKKF K L I CVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRR 
Sbjct: 550  DIKKFTKALGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRA 609

Query: 1714 TFLVMDEADRMFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQV 1893
            T+LV+DEADRMFDMGFEPQITRI+QN RPDRQTVLFSATFPRQVEILARKVLNKPVEIQV
Sbjct: 610  TYLVLDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQV 669

Query: 1894 GGRSVVNKDITQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHS 2073
            GGRSVVNKDITQLVE+RPES+RFLRLLE+LGEWYEKGKIL+FVH+Q+KCDALFRDLLKH 
Sbjct: 670  GGRSVVNKDITQLVEMRPESERFLRLLELLGEWYEKGKILIFVHTQEKCDALFRDLLKHG 729

Query: 2074 YPCLSLHGAKDQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDY 2253
            YPCLSLHGAKDQTDRESTISDFK+NVCNLLIATS+AARGLDVKELELV+NFDVPNHYEDY
Sbjct: 730  YPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVINFDVPNHYEDY 789

Query: 2254 VHRVGRTGRAGRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQG 2433
            VHRVGRTGRAGRKGCAITFIS +D RYAPDLVKALELSEQ +P DLKALA+ FMAKVNQG
Sbjct: 790  VHRVGRTGRAGRKGCAITFISEDDARYAPDLVKALELSEQVLPDDLKALADGFMAKVNQG 849

Query: 2434 TEQAHGTGYGGSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKAGGDLXX 2613
             EQAHGTGYGGSGFKFN                 YGF            G+RKAGGD+  
Sbjct: 850  LEQAHGTGYGGSGFKFNEEEDEKRKAAKKAQAKEYGFEEDKSDSEDEDEGVRKAGGDISQ 909

Query: 2614 XXXXXXXXXXXXXXXXXXXXM--PTQVVTPLPFTXXXXXXXXXXXXXXXXXPSV---TAL 2778
                                M  P      LP                    +V   + L
Sbjct: 910  QTALAQIAAMAAASKAGTALMQNPLSSAQLLPNAVLPVSLPGVLGVSMPGTAAVVPGSGL 969

Query: 2779 PG---EXXXXXXXXXXXXXXXXXXXXXQAEAMPEHYEAELEINDFPQNARWKITHKETLW 2949
            PG   E                     QA+AMPEHYEAELEIN+FPQNARWK+THKETL 
Sbjct: 970  PGLANEEAARKAALQAALNLQHNLAKIQADAMPEHYEAELEINEFPQNARWKVTHKETLG 1029

Query: 2950 PISEWTGAAITTRGQYFPPGKIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQA 3129
            PISEWTGAAITTRGQ+FPPG+I GPGERKLYLFIEGPTE SVK+AKAE+KRVLED++ Q+
Sbjct: 1030 PISEWTGAAITTRGQFFPPGRIPGPGERKLYLFIEGPTELSVKRAKAELKRVLEDFSHQS 1089

Query: 3130 LNLSGASQPGKYSVI 3174
            L L G +QPG+Y V+
Sbjct: 1090 LQLPGGTQPGRYQVL 1104


>ref|XP_006422279.1| hypothetical protein CICLE_v10004206mg [Citrus clementina]
            gi|568881846|ref|XP_006493760.1| PREDICTED: DEAD-box
            ATP-dependent RNA helicase 42-like isoform X1 [Citrus
            sinensis] gi|557524152|gb|ESR35519.1| hypothetical
            protein CICLE_v10004206mg [Citrus clementina]
          Length = 1110

 Score = 1121 bits (2899), Expect = 0.0
 Identities = 603/955 (63%), Positives = 674/955 (70%), Gaps = 22/955 (2%)
 Frame = +1

Query: 376  SEDSRRSRATDKESDXXXXXXXXXXXXXXXXXXXXXIDKRRRRVQEWQXXXXXXXXXXXX 555
            +++S R +  + +SD                     ++KRRRRVQEWQ            
Sbjct: 174  NDESPREKLVEDDSDKKEKKTREEELEDEQRKLDEEMEKRRRRVQEWQELKRKKEESERE 233

Query: 556  XXGSENGKEDEAMLGKNWTLEGE-SDDEDAPP----KSDKDISVXXXXXXXXXXXXXXXX 720
              G  N +E +A  G+NWTL+ E SDDE+ P     ++D D                   
Sbjct: 234  NRGDANVEEPKA--GRNWTLDREDSDDEEVPQTGKSETDMDADEEPKPSENQVGDAMLVD 291

Query: 721  XXXXXXXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSMVLPEVEKLQSA---------EI 873
                       IG                   AFMNSMVLPEVEKLQ+           +
Sbjct: 292  SDGGSAAPALQIGAAEDEDIDPLD--------AFMNSMVLPEVEKLQNTVEPSFTDGNNV 343

Query: 874  AAKPHEKKGIMTKASKEAFSNGDRLRKGEKNAMGRIIPGEDSDSDYXXXXXXXXXXXXXX 1053
             +K  ++KG       +  SNG++ +K    ++GRIIPGEDSDSDY              
Sbjct: 344  ESKKMDRKG-------DRRSNGEQPKKSSNKSLGRIIPGEDSDSDYGDLENDEKPLEDED 396

Query: 1054 XXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMSTEEVSAYRKQLELKIH 1233
               FMKRVKKTKAEKLSIVDHSKI Y PFRKN YIE+KEIARM+ EEVSAYRKQLELKIH
Sbjct: 397  DDEFMKRVKKTKAEKLSIVDHSKIDYQPFRKNFYIEVKEIARMTPEEVSAYRKQLELKIH 456

Query: 1234 GKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKT 1413
            GKDVPKPIKTW Q GL +KI++TI+KL++EKPM IQAQALP+IMSGRDCIG+AKTGSGKT
Sbjct: 457  GKDVPKPIKTWHQTGLTSKIMETIRKLNYEKPMPIQAQALPVIMSGRDCIGVAKTGSGKT 516

Query: 1414 LAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKKFAKPLNINCVPVYGGS 1593
            LAFVLPMLRHIKDQP V +G+GPVGL+MAPTRELVQQIH+DI+KFAK + + CVPVYGGS
Sbjct: 517  LAFVLPMLRHIKDQPPVAAGDGPVGLIMAPTRELVQQIHSDIRKFAKVMGVRCVPVYGGS 576

Query: 1594 GVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLVMDEADRMFDMGFEPQI 1773
            GVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVT+LVMDEADRMFDMGFEPQI
Sbjct: 577  GVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQI 636

Query: 1774 TRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPES 1953
            TRI+QN RPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPES
Sbjct: 637  TRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPES 696

Query: 1954 DRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCLSLHGAKDQTDRESTIS 2133
            DRFLRLLE+LGEWYEKGKIL+FVHSQ+KCDALFRDLLKH YPCLSLHGAKDQTDRESTIS
Sbjct: 697  DRFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTDRESTIS 756

Query: 2134 DFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRVGRTGRAGRKGCAITFI 2313
            DFK+NVCNLLIATS+AARGLDVKELELV+NFD PNHYEDYVHRVGRTGRAGRKGCAITFI
Sbjct: 757  DFKSNVCNLLIATSVAARGLDVKELELVINFDAPNHYEDYVHRVGRTGRAGRKGCAITFI 816

Query: 2314 SLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGTEQAHGTGYGGSGFKFNXXX 2493
            S ED +Y+PDLVKALELSEQ VP DLKALA++FMAKVNQG EQAHGTGYGGSGFKFN   
Sbjct: 817  SEEDAKYSPDLVKALELSEQVVPDDLKALADSFMAKVNQGLEQAHGTGYGGSGFKFNEEE 876

Query: 2494 XXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKAGGDLXXXXXXXXXXXXXXXXXXXXXX 2673
                          YGF            GIRKAGGD+                      
Sbjct: 877  DEKRKAAKKAQAKEYGFEEDKSDSDDEDEGIRKAGGDI-SQQDALAKISAIAAASKASAS 935

Query: 2674 MPTQVVTP--LPFT-XXXXXXXXXXXXXXXXXPSVTA-----LPGEXXXXXXXXXXXXXX 2829
            MPT +     LP                    P+V+A     +P +              
Sbjct: 936  MPTPISAAQLLPNAGLPISLPGVLGLSIPGAAPTVSATGLPVVPNDGAARAAALAAAINL 995

Query: 2830 XXXXXXXQAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWTGAAITTRGQYFPPG 3009
                   QA+AMPEHYEAELEINDFPQNARWK+THKETL PISEWTGAAITTRGQYFPP 
Sbjct: 996  QHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQYFPPS 1055

Query: 3010 KIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQPGKYSVI 3174
            +I GPGERKLYLFIEGPTE SVK+AKAE+KRVLED+T QAL+L G +QPG+YSV+
Sbjct: 1056 RIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDFTNQALSLPGGAQPGRYSVV 1110


>gb|EOY18124.1| P-loop containing nucleoside triphosphate hydrolases superfamily
            protein isoform 1 [Theobroma cacao]
          Length = 1167

 Score = 1108 bits (2867), Expect = 0.0
 Identities = 587/903 (65%), Positives = 655/903 (72%), Gaps = 18/903 (1%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKEDEAMLGKNWTLEGESDDED-APPKSDK 660
            ++KRRRRVQEWQ              G  N +++E  +GK WTLEGESDD++ AP K + 
Sbjct: 190  MEKRRRRVQEWQELRRKKEESEREKRGEGNAEDEETKVGKAWTLEGESDDDEVAPTKLET 249

Query: 661  DISVXXXXXXXXXXXXXXXXXXXXXXXXXXH-----IGTKXXXXXXXXXXXXXXXXXAFM 825
            ++ V                          +     + T+                 AFM
Sbjct: 250  NMDVDENENSNSKPDSKGIGDAMMEDGDSDNGEDKMLVTQNGGNGISEEDDEIDPLDAFM 309

Query: 826  NSMVLPEVEKLQSAEIA---AKPHEKKGIMTKASKEAFSNGDRL-RKGEKNAMGRIIPGE 993
            NSMVLPEVEKL +A +        +K G + K  K+  SNG +  +KG   A+GRIIPGE
Sbjct: 310  NSMVLPEVEKLSNAVVVPPTTADDDKNGNLKKDKKDGLSNGGQQPKKGSNKALGRIIPGE 369

Query: 994  DSDSDYXXXXXXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEI 1173
            DSDSDY                 FMKRVKKTKAEKLSIVDHSKI Y PFRKN YIE+KEI
Sbjct: 370  DSDSDYGDFENDEEDLEDEDDDEFMKRVKKTKAEKLSIVDHSKIDYKPFRKNFYIEVKEI 429

Query: 1174 ARMSTEEVSAYRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQAL 1353
            +RM+ EEV+AYRK+LELK+HGKDVPKP+KTW Q GL +KIL+TI+KL++EKPM IQAQAL
Sbjct: 430  SRMTPEEVAAYRKELELKLHGKDVPKPVKTWHQTGLTSKILETIRKLNYEKPMPIQAQAL 489

Query: 1354 PIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHN 1533
            PIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQP VV+G+GP+GL+MAPTRELVQQIH+
Sbjct: 490  PIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHS 549

Query: 1534 DIKKFAKPLNINCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRV 1713
            DIKKF K L I CVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRR 
Sbjct: 550  DIKKFTKALGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRA 609

Query: 1714 TFLVMDEADRMFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQV 1893
            T+LV+DEADRMFDMGFEPQITRI+QN RPDRQTVLFSATFPRQVEILARKVLNKPVEIQV
Sbjct: 610  TYLVLDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQV 669

Query: 1894 GGRSVVNKDITQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHS 2073
            GGRSVVNKDITQLVE+RPES+RFLRLLE+LGEWYEKGKIL+FVH+Q+KCDALFRDLLKH 
Sbjct: 670  GGRSVVNKDITQLVEMRPESERFLRLLELLGEWYEKGKILIFVHTQEKCDALFRDLLKHG 729

Query: 2074 YPCLSLHGAKDQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDY 2253
            YPCLSLHGAKDQTDRESTISDFK+NVCNLLIATS+AARGLDVKELELV+NFDVPNHYEDY
Sbjct: 730  YPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVINFDVPNHYEDY 789

Query: 2254 VHRVGRTGRAGRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQG 2433
            VHRVGRTGRAGRKGCAITFIS +D RYAPDLVKALELSEQ +P DLKALA+ FMAKVNQG
Sbjct: 790  VHRVGRTGRAGRKGCAITFISEDDARYAPDLVKALELSEQVLPDDLKALADGFMAKVNQG 849

Query: 2434 TEQAHGTGYGGSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKAGGDLXX 2613
             EQAHGTGYGGSGFKFN                 YGF            G+RKAGGD+  
Sbjct: 850  LEQAHGTGYGGSGFKFNEEEDEKRKAAKKAQAKEYGFEEDKSDSEDEDEGVRKAGGDISQ 909

Query: 2614 XXXXXXXXXXXXXXXXXXXXM--PTQVVTPLPFTXXXXXXXXXXXXXXXXXPSV---TAL 2778
                                M  P      LP                    +V   + L
Sbjct: 910  QTALAQIAAMAAASKAGTALMQNPLSSAQLLPNAVLPVSLPGVLGVSMPGTAAVVPGSGL 969

Query: 2779 PG---EXXXXXXXXXXXXXXXXXXXXXQAEAMPEHYEAELEINDFPQNARWKITHKETLW 2949
            PG   E                     QA+AMPEHYEAELEIN+FPQNARWK+THKETL 
Sbjct: 970  PGLANEEAARKAALQAALNLQHNLAKIQADAMPEHYEAELEINEFPQNARWKVTHKETLG 1029

Query: 2950 PISEWTGAAITTRGQYFPPGKIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQA 3129
            PISEWTGAAITTRGQ+FPPG+I GPGERKLYLFIEGPTE SVK+AKAE+KRVLED++ Q+
Sbjct: 1030 PISEWTGAAITTRGQFFPPGRIPGPGERKLYLFIEGPTELSVKRAKAELKRVLEDFSHQS 1089

Query: 3130 LNL 3138
            L L
Sbjct: 1090 LQL 1092


>ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform X1
            [Glycine max]
          Length = 1104

 Score = 1096 bits (2834), Expect = 0.0
 Identities = 582/904 (64%), Positives = 649/904 (71%), Gaps = 7/904 (0%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKEDEAMLGKNWTLEGESDDEDA---PPKS 654
            ++KRRRRVQEWQ              G  +  E E+  GK WTLEGESDDE+      ++
Sbjct: 231  MEKRRRRVQEWQELRRKKEEAEREKQGEASANEPES--GKTWTLEGESDDEEGLGTGKQT 288

Query: 655  DKDISVXXXXXXXXXXXXXXXXXXXXXXXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSM 834
              D+                              GT                  AFMNSM
Sbjct: 289  GMDVDEDDKPADEEPKDVMVVDTDNGTIASDLQDGTAGAPEDEEIDPLD-----AFMNSM 343

Query: 835  VLPEVEKLQSAEIAAKPHEKKGIMTKASKEAFSNGDRLRKGEKNAMGRIIPGEDSDSDYX 1014
            VLPEVEKL +A  ++   +   +  K      + G + RKG   ++GRIIPGE+SDSDY 
Sbjct: 344  VLPEVEKLNNAVTSSLSDKAIDVKPKDKGNGQNRGAQSRKGSNKSIGRIIPGEESDSDYA 403

Query: 1015 XXXXXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMSTEE 1194
                            FMKRVKKTKAEKLS+VDHSKI Y PF+KN YIE+KEI++M+ EE
Sbjct: 404  DDEVEKDPLDEDDDE-FMKRVKKTKAEKLSLVDHSKIDYEPFKKNFYIEVKEISKMTPEE 462

Query: 1195 VSAYRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIMSGR 1374
             + YRKQLELKIHGKDVPKPIK+W Q GL +KIL+TIKK++FE PM IQAQALP+IMSGR
Sbjct: 463  AAVYRKQLELKIHGKDVPKPIKSWHQTGLPSKILETIKKMNFEMPMPIQAQALPVIMSGR 522

Query: 1375 DCIGIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKKFAK 1554
            DCIGIAKTGSGKTLAFVLPMLRHIKDQP VV+G+GP+GL+MAPTRELVQQIH+DIKKFAK
Sbjct: 523  DCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAK 582

Query: 1555 PLNINCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLVMDE 1734
             L + CVPVYGGSGVAQQISELKRG EIVVCTPGRMIDILCTS GKITNLRRVT+LVMDE
Sbjct: 583  VLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDE 642

Query: 1735 ADRMFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVN 1914
            ADRMFDMGFEPQITRI+QN RPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVN
Sbjct: 643  ADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVN 702

Query: 1915 KDITQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCLSLH 2094
            KDITQLVEVRP+++RFLRLLEILGEWYEKGKIL+FVHSQ+KCD+LF+DLL+H YPCLSLH
Sbjct: 703  KDITQLVEVRPDNERFLRLLEILGEWYEKGKILIFVHSQEKCDSLFKDLLRHGYPCLSLH 762

Query: 2095 GAKDQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRVGRT 2274
            GAKDQTDRESTISDFK+NVCNLL+ATSIAARGLDVKELELV+NFDVPNHYEDYVHRVGRT
Sbjct: 763  GAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRT 822

Query: 2275 GRAGRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGTEQAHGT 2454
            GRAGRKGCAITFIS E+ RYAPDL+KALELSEQ VP DLKALA +FMAKVNQG EQAHGT
Sbjct: 823  GRAGRKGCAITFISEEEARYAPDLLKALELSEQIVPNDLKALAGSFMAKVNQGLEQAHGT 882

Query: 2455 GYGGSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKAGGDLXXXXXXXXX 2634
            GYGGSGFKFN                 YGF            GIRKAGGD+         
Sbjct: 883  GYGGSGFKFNEEEDEVRKAAKKAQAKEYGFEEEKSDSEDEDEGIRKAGGDI---SQHSAF 939

Query: 2635 XXXXXXXXXXXXXMPTQVVTP----LPFTXXXXXXXXXXXXXXXXXPSVTALPGEXXXXX 2802
                         +PT ++ P    LP T                      LP       
Sbjct: 940  AQIIAATKGNAPALPTPILLPSLQVLPGTG-------------------LPLPANDGAAR 980

Query: 2803 XXXXXXXXXXXXXXXXQAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWTGAAIT 2982
                            ++EA+PEHYEAELEINDFPQNARWK+THKETL PISEW+GAAIT
Sbjct: 981  AAAIAALNLQDKLDKIRSEALPEHYEAELEINDFPQNARWKVTHKETLGPISEWSGAAIT 1040

Query: 2983 TRGQYFPPGKIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQPGK 3162
            TRGQ+FPPGKI GPGERKLYLFIEGPTE SVK AKA++KRVLED T QAL L G +QPGK
Sbjct: 1041 TRGQFFPPGKIPGPGERKLYLFIEGPTEHSVKSAKADLKRVLEDITNQALQLPGGTQPGK 1100

Query: 3163 YSVI 3174
            YSV+
Sbjct: 1101 YSVV 1104


>ref|XP_002307002.2| hypothetical protein POPTR_0005s27880g [Populus trichocarpa]
            gi|550339899|gb|EEE93998.2| hypothetical protein
            POPTR_0005s27880g [Populus trichocarpa]
          Length = 1073

 Score = 1095 bits (2833), Expect = 0.0
 Identities = 587/907 (64%), Positives = 640/907 (70%), Gaps = 10/907 (1%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKEDEAMLGKNWTLEGESDDEDAPP--KSD 657
            ++KRRRRVQEWQ              G E    DE+  GK WTLEGESDDE+APP  KSD
Sbjct: 179  MEKRRRRVQEWQELRRKKEETESEK-GGEEANVDESKSGKTWTLEGESDDEEAPPTGKSD 237

Query: 658  KDISVXXXXXXXXXXXXXXXXXXXXXXXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSMV 837
             DI                             I                    AFMNSMV
Sbjct: 238  MDID------QEENAIPDKEAGDAMVVDTENDISAPQSEVDAVNGDEEIDPLDAFMNSMV 291

Query: 838  LPEVEKLQSAEIAAKPHEKKGIMTKASK-EAFSNGDRLRKGEKNAMGRIIPGEDSDSDYX 1014
            LPEVE L +A +     + K    K  K +   NG + +KG   ++GRIIPGEDSDSD+ 
Sbjct: 292  LPEVEMLNNAVVTQTADDNKADSKKKDKNDEGINGGQRKKGSHKSLGRIIPGEDSDSDHG 351

Query: 1015 XXXXXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMSTEE 1194
                            FMKRVKKTKAEKLSIVDHSKI Y PFRKN YIE+KEI RM+ EE
Sbjct: 352  DLENSEVPLEDEDDDEFMKRVKKTKAEKLSIVDHSKIDYSPFRKNFYIEVKEILRMTPEE 411

Query: 1195 VSAYRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIMSGR 1374
            V+AYRK LELKIHGKDVPKPIKTW Q GL +KIL+TIKKL++EKPM+IQAQALPIIMSGR
Sbjct: 412  VTAYRKLLELKIHGKDVPKPIKTWHQTGLTSKILETIKKLNYEKPMTIQAQALPIIMSGR 471

Query: 1375 DCIGIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKKFAK 1554
            DCIGIAKTGSGKTLAFVLPMLRHIKDQP V +GEGP+GL+MAPTRELVQQIH+DI+KF K
Sbjct: 472  DCIGIAKTGSGKTLAFVLPMLRHIKDQPPVEAGEGPIGLIMAPTRELVQQIHSDIRKFTK 531

Query: 1555 PLNINCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLVMDE 1734
             L I CVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVT+LVMDE
Sbjct: 532  ALGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDE 591

Query: 1735 ADRMFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVN 1914
            ADRMFDMGFEPQITRI+QN RPD QTVLFSATFPRQVE LARKVLNKPVEIQVGGRSVVN
Sbjct: 592  ADRMFDMGFEPQITRIVQNIRPDHQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVN 651

Query: 1915 KDITQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCLSLH 2094
            KDI QLVEVRPE +R+ RLLE+LG W EKGKILVFV SQDKCDALFRDLLK  +PCLSLH
Sbjct: 652  KDINQLVEVRPEGERWFRLLELLGVWSEKGKILVFVQSQDKCDALFRDLLKFGHPCLSLH 711

Query: 2095 GAKDQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRVGRT 2274
            GAKDQTDRESTISDFK+NVCNLLIATS+AARGLDVK+LELV+N+DVPNHYEDYVHRVGRT
Sbjct: 712  GAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKDLELVINYDVPNHYEDYVHRVGRT 771

Query: 2275 GRAGRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGTEQAHGT 2454
            GRAGRKGCAITF S +D RYAPDLVKALELSEQ VP DLKALA+ FM KVNQG EQAHGT
Sbjct: 772  GRAGRKGCAITFFSEDDARYAPDLVKALELSEQVVPQDLKALADGFMVKVNQGLEQAHGT 831

Query: 2455 GYGGSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKAGGDLXXXXXXXXX 2634
            GYGGSGFKFN                 YGF             +RKAGGD+         
Sbjct: 832  GYGGSGFKFNEEEDEKRMAAKKAQAREYGFEEEKSDSEDEDEVVRKAGGDISQQTALAQQ 891

Query: 2635 XXXXXXXXXXXXXMPTQVVTPLPFTXXXXXXXXXXXXXXXXXP---SVTALP----GEXX 2793
                              V P P +                 P   SVT LP     E  
Sbjct: 892  IAALAAVSKIPAP-----VAPTPHSVTQFLSNGGLPVPLNQGPAVASVTGLPFAHSNEAA 946

Query: 2794 XXXXXXXXXXXXXXXXXXXQAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWTGA 2973
                               QA+AMPEHYEAELEINDFPQNARWK+THKETL PIS+WTGA
Sbjct: 947  ARAAAMAAAMNLQHNLARIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISDWTGA 1006

Query: 2974 AITTRGQYFPPGKIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQ 3153
            AITTRGQ+FPPGK+ GPG+RKLYLFIEGPTE SVK+AKA++K VLED T Q   L G +Q
Sbjct: 1007 AITTRGQFFPPGKVPGPGDRKLYLFIEGPTEQSVKRAKADLKHVLEDITNQTYQLPGGAQ 1066

Query: 3154 PGKYSVI 3174
            PGKYSV+
Sbjct: 1067 PGKYSVV 1073


>ref|XP_002301895.1| DEAD/DEAH box helicase family protein [Populus trichocarpa]
            gi|222843621|gb|EEE81168.1| DEAD/DEAH box helicase family
            protein [Populus trichocarpa]
          Length = 1112

 Score = 1094 bits (2830), Expect = 0.0
 Identities = 583/904 (64%), Positives = 645/904 (71%), Gaps = 7/904 (0%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKEDEAMLGKNWTLEGESDDEDAPP--KSD 657
            ++KRRRRVQEWQ              G E    +E   GK WTLEGESDDE+APP  KS+
Sbjct: 245  MEKRRRRVQEWQELRRKKEETEREKHGEE-ADVNEPKTGKTWTLEGESDDEEAPPTGKSE 303

Query: 658  KDISVXXXXXXXXXXXXXXXXXXXXXXXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSMV 837
             D+ +                                                AFMNSMV
Sbjct: 304  TDMDLEENAKPDEEEIDPLD---------------------------------AFMNSMV 330

Query: 838  LPEVEKLQSAEIAAKPHEKK-GIMTKASKEAFSNGDRLRKGEKNAMGRIIPGEDSDSDYX 1014
            LPEVEKL S  +     + K  +  K  KE   NG++ +KG   ++GRI+PGEDSDSDY 
Sbjct: 331  LPEVEKLNSTLVTHTADDNKTDLKNKDKKEERINGEQRKKGSHKSLGRIVPGEDSDSDYG 390

Query: 1015 XXXXXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMSTEE 1194
                            FMKRVKKTKAEKLSIVDHSKI Y PFRKN YIE+KEI+RM+ EE
Sbjct: 391  DLENGEDPLEEEDDDEFMKRVKKTKAEKLSIVDHSKIDYNPFRKNFYIEVKEISRMTPEE 450

Query: 1195 VSAYRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIMSGR 1374
            V A RK+LELK+HGKDVPKPIKTW Q GL +KIL+TIKKL++EKPM+IQAQALPIIMSGR
Sbjct: 451  VVACRKELELKLHGKDVPKPIKTWHQTGLTSKILETIKKLNYEKPMTIQAQALPIIMSGR 510

Query: 1375 DCIGIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKKFAK 1554
            DCIGIAKTGSGKTLAFVLPMLRHIKDQP V +GEGP+GLVMAPTRELVQQIH+DIKKFAK
Sbjct: 511  DCIGIAKTGSGKTLAFVLPMLRHIKDQPPVEAGEGPIGLVMAPTRELVQQIHSDIKKFAK 570

Query: 1555 PLNINCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLVMDE 1734
             L+I CVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVT+LVMDE
Sbjct: 571  ALSIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDE 630

Query: 1735 ADRMFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVN 1914
            ADRMFDMGFEPQITRI+QN RPDRQTVLFSATFPRQVE LARKVLNKPVEIQVGGRSVVN
Sbjct: 631  ADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVN 690

Query: 1915 KDITQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCLSLH 2094
            KDITQLVE+R E  R+LRLLE+LGEWY+KGKIL+FV SQDKCD+LFR+LLK  YPCLSLH
Sbjct: 691  KDITQLVELRTEDQRWLRLLELLGEWYQKGKILIFVQSQDKCDSLFRNLLKFGYPCLSLH 750

Query: 2095 GAKDQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRVGRT 2274
            GAKDQTDRESTISDFK NVCNL+IATS+AARGLDVK+LELV+N+D PNHYEDYVHRVGRT
Sbjct: 751  GAKDQTDRESTISDFKTNVCNLMIATSVAARGLDVKDLELVINYDAPNHYEDYVHRVGRT 810

Query: 2275 GRAGRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGTEQAHGT 2454
            GRAGRKGCAITFIS +D RYAPDLVKALELSEQ VP DLKALA+ FMAKVNQG EQAHGT
Sbjct: 811  GRAGRKGCAITFISEDDARYAPDLVKALELSEQVVPQDLKALADGFMAKVNQGLEQAHGT 870

Query: 2455 GYGGSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKAGGDLXXXXXXXXX 2634
            GYGGSGFKFN                 YG+             +RK+ GD+         
Sbjct: 871  GYGGSGFKFNEEEDEKRMAAKKAQAKEYGYEDEKSDSEDEDEVVRKSVGDV--SQQTALA 928

Query: 2635 XXXXXXXXXXXXXMPTQVVTPLPFTXXXXXXXXXXXXXXXXXPSVTALP----GEXXXXX 2802
                         MP   ++                       SVT LP     E     
Sbjct: 929  QQIAALAAVSKVPMPAPPISHSVAQLLSNGGLPVPPNPGPAVVSVTGLPFVPNNEGAARA 988

Query: 2803 XXXXXXXXXXXXXXXXQAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWTGAAIT 2982
                            QA+AMPEHYEAELEINDFPQNARWK+THKETL PIS+WTGAAIT
Sbjct: 989  AALAAAMNLQHNLARIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISDWTGAAIT 1048

Query: 2983 TRGQYFPPGKIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQPGK 3162
            TRGQ+FPPGK+ GPGERKLYLFIEGPTE SVK+AKA++KRVLED T Q   L G +QPGK
Sbjct: 1049 TRGQFFPPGKVPGPGERKLYLFIEGPTEQSVKRAKADLKRVLEDITNQTYQLPGGTQPGK 1108

Query: 3163 YSVI 3174
            YSV+
Sbjct: 1109 YSVV 1112


>gb|ESW29025.1| hypothetical protein PHAVU_002G037900g [Phaseolus vulgaris]
            gi|561030447|gb|ESW29026.1| hypothetical protein
            PHAVU_002G037900g [Phaseolus vulgaris]
          Length = 1129

 Score = 1092 bits (2823), Expect = 0.0
 Identities = 581/909 (63%), Positives = 645/909 (70%), Gaps = 12/909 (1%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKEDEAMLGKNWTLEGESDDEDAPPKSDKD 663
            I+KRRRRVQEWQ              G  +  E E+  GK WTLEGESDDE+ P    +D
Sbjct: 237  IEKRRRRVQEWQELRRKKEEAEREKHGEVSANEPES--GKTWTLEGESDDEEGPGTEKQD 294

Query: 664  ISVXXXXXXXXXXXXXXXXXXXXXXXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSMVLP 843
              +                              +                 AFMNSMVLP
Sbjct: 295  TGMDVDEDDKPADMEPKDVMEVDTDNGTIASDLQEGTAGTPEDDEIDPLD-AFMNSMVLP 353

Query: 844  EVEKLQSAEIAAKPHEKKGIMTKASKEAFSNGDRLRKGEKNAMGRIIPGEDSDSDYXXXX 1023
            EVEKL +A  +    +   I  K      S G + RKG   ++GRIIPGE+SDSDY    
Sbjct: 354  EVEKLNNAVTSVISDKAVDIKAKDKGNEQSRGTQSRKGSNKSIGRIIPGEESDSDYADDE 413

Query: 1024 XXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMSTEEVSA 1203
                         FMKRVKKTKAEKLS+VDHSKI Y PF+K  YIE+KE+++M+ EE + 
Sbjct: 414  VERDPLDEDDDE-FMKRVKKTKAEKLSLVDHSKIDYEPFKKTFYIEVKEMSKMTPEEAAV 472

Query: 1204 YRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIMSGRDCI 1383
            YRKQLELKIHGKDVPKPIK+W Q GLG+K+L+TIKK++FEKPM IQAQALP+IMSGRDCI
Sbjct: 473  YRKQLELKIHGKDVPKPIKSWHQTGLGSKVLETIKKMNFEKPMPIQAQALPVIMSGRDCI 532

Query: 1384 GIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKKFAKPLN 1563
            GIAKTGSGKTLAFVLPMLRHIKDQP VV+G+GP+GL+MAPTRELVQQIH+DIKKFAK L 
Sbjct: 533  GIAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKILG 592

Query: 1564 INCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLVMDEADR 1743
            + CVPVYGGSGVAQQISELKRG EIVVCTPGRMIDILCTS GKITNLRRVT+LVMDEADR
Sbjct: 593  LRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADR 652

Query: 1744 MFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDI 1923
            MFDMGFEPQI RI+QN RPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDI
Sbjct: 653  MFDMGFEPQIARIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDI 712

Query: 1924 TQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCLSLHGAK 2103
             QLVEVRP+++RFLRLLEILGEWYEKGKIL+FVHSQ+KCD+LF+DLL+H YPCLSLHGAK
Sbjct: 713  LQLVEVRPDNERFLRLLEILGEWYEKGKILIFVHSQEKCDSLFKDLLRHGYPCLSLHGAK 772

Query: 2104 DQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRVGRTGRA 2283
            DQTDRESTISDFK+NVC+LL+ATSIAARGLDVKELELV+NFDVPNHYEDYVHRVGRTGRA
Sbjct: 773  DQTDRESTISDFKSNVCSLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRA 832

Query: 2284 GRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGTEQAHGTGYG 2463
            GRKGCAITFIS E+ RYAPDL+KALELSEQ VP DLK LA+ FMAKVNQG EQAHGTGYG
Sbjct: 833  GRKGCAITFISEEEARYAPDLLKALELSEQTVPNDLKTLADGFMAKVNQGLEQAHGTGYG 892

Query: 2464 GSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKAGGDLXXXXXXXXXXXX 2643
            GSGFKFN                 YGF            GIRKAGGD+            
Sbjct: 893  GSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDEGIRKAGGDI------------ 940

Query: 2644 XXXXXXXXXXMPTQVVTPLPFTXXXXXXXXXXXXXXXXXPSV------TALPGEXXXXXX 2805
                        T+V  P   T                 PSV        LPG       
Sbjct: 941  SQHPAFAQILAATKVNAPALPTPISAAQLISNGGLPVSFPSVLGLQTPAVLPGTGLPLAA 1000

Query: 2806 XXXXXXXXXXXXXXXQ------AEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWT 2967
                           +      +EA+PEHYEAELEINDFPQNARWK+THKETL PIS+WT
Sbjct: 1001 NDGAARAALAAMNLHRNIEKIQSEALPEHYEAELEINDFPQNARWKVTHKETLGPISDWT 1060

Query: 2968 GAAITTRGQYFPPGKIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGA 3147
            GAAITTRGQ+FPPGKI GPGERKLYLFIEGPTE SVK AKA++KRVLED T QAL L G 
Sbjct: 1061 GAAITTRGQFFPPGKIPGPGERKLYLFIEGPTEQSVKTAKAQLKRVLEDITNQALQLPGG 1120

Query: 3148 SQPGKYSVI 3174
            +QPGKYSV+
Sbjct: 1121 NQPGKYSVV 1129


>ref|XP_006590453.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform X1
            [Glycine max]
          Length = 1107

 Score = 1091 bits (2821), Expect = 0.0
 Identities = 579/904 (64%), Positives = 648/904 (71%), Gaps = 7/904 (0%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKEDEAMLGKNWTLEGESDDEDAP---PKS 654
            ++KRRRRVQEWQ              G  +  E E+  GK WTLEGESDDE+ P    ++
Sbjct: 234  MEKRRRRVQEWQELRRKREEAEREKHGEASANEPES--GKTWTLEGESDDEEGPGTGKQT 291

Query: 655  DKDISVXXXXXXXXXXXXXXXXXXXXXXXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSM 834
              D+                              G                   AFMNSM
Sbjct: 292  GMDVDEDDKPADKEPKDVMVVDTVNGTIASDLQDGPAGAPEDEEIDPLD-----AFMNSM 346

Query: 835  VLPEVEKLQSAEIAAKPHEKKGIMTKASKEAFSNGDRLRKGEKNAMGRIIPGEDSDSDYX 1014
            VLPEVEKL +A  ++   +   +  K      + G + RK    ++GRIIPGE+SDSDY 
Sbjct: 347  VLPEVEKLNNAVTSSLSGKAIDVKPKDKGNEQNRGAQSRKVSNKSIGRIIPGEESDSDYA 406

Query: 1015 XXXXXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMSTEE 1194
                            FMKRVKKTKAEKLS+VDHSKI Y PF+KN YIE+KE+++M+ EE
Sbjct: 407  DDEVEKDPLDEDDDE-FMKRVKKTKAEKLSLVDHSKIVYEPFKKNFYIEVKEVSKMTPEE 465

Query: 1195 VSAYRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIMSGR 1374
             + YRKQLELKIHGKDVPKPIK+W Q GL +KIL+TIKK++FEKPM IQAQALP+IMSGR
Sbjct: 466  SAVYRKQLELKIHGKDVPKPIKSWHQTGLASKILETIKKMNFEKPMPIQAQALPVIMSGR 525

Query: 1375 DCIGIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKKFAK 1554
            DCIGIAKTGSGKTLAFVLPMLRHIKDQP VV+G+GP+GL+MAPTRELVQQIH+DIKKFAK
Sbjct: 526  DCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAK 585

Query: 1555 PLNINCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLVMDE 1734
             L + CVPVYGGSGVAQQISELKRG EIVVCTPGRMIDILCTS GKITNL RVT+LVMDE
Sbjct: 586  VLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLHRVTYLVMDE 645

Query: 1735 ADRMFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVN 1914
            ADRMFDMGFEPQITRI+QN RPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVN
Sbjct: 646  ADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVN 705

Query: 1915 KDITQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCLSLH 2094
            KDITQLVEVRP+++RFLRLLEILGEWYEKGKIL+FVHSQ+KCD+LF+DLL+H YPCLSLH
Sbjct: 706  KDITQLVEVRPDNERFLRLLEILGEWYEKGKILIFVHSQEKCDSLFKDLLRHGYPCLSLH 765

Query: 2095 GAKDQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRVGRT 2274
            GAKDQTDRESTISDFK+NVCNLL+ATSIAARGLDVKELELV+NFDVPNHYEDYVHRVGRT
Sbjct: 766  GAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRT 825

Query: 2275 GRAGRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGTEQAHGT 2454
            GRAGRKGCAITFIS E+ RYAPDL+KALELSEQ VP DLKALA +FMAKVNQG EQAHGT
Sbjct: 826  GRAGRKGCAITFISEEEARYAPDLLKALELSEQTVPNDLKALAGSFMAKVNQGLEQAHGT 885

Query: 2455 GYGGSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKAGGDLXXXXXXXXX 2634
            GYGGSGFKFN                 YGF            GIRKAGGD+         
Sbjct: 886  GYGGSGFKFNEEEDEVRKAAKKAQAKEYGFEEEKSDSEDEDEGIRKAGGDI---SQHSAF 942

Query: 2635 XXXXXXXXXXXXXMPTQVVTP----LPFTXXXXXXXXXXXXXXXXXPSVTALPGEXXXXX 2802
                         +PT ++ P    LP T                      LP       
Sbjct: 943  AQIIAATKGNVPALPTPMLLPSLPVLPGTG-------------------LPLPANEGAAR 983

Query: 2803 XXXXXXXXXXXXXXXXQAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWTGAAIT 2982
                            ++EA+PEHYEAELEINDFPQNARWK+THKETL PISEW+GAAIT
Sbjct: 984  AAAIAALNLQDKLDKIRSEALPEHYEAELEINDFPQNARWKVTHKETLGPISEWSGAAIT 1043

Query: 2983 TRGQYFPPGKIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQPGK 3162
            TRGQ+FPPGKI GPGERKLYLFIEGPTE SVK AKA++KRVLED T QA+ L G +QPGK
Sbjct: 1044 TRGQFFPPGKIPGPGERKLYLFIEGPTEHSVKSAKADLKRVLEDITNQAMQLPGGTQPGK 1103

Query: 3163 YSVI 3174
            YSV+
Sbjct: 1104 YSVV 1107


>ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
            vinifera]
          Length = 1147

 Score = 1088 bits (2813), Expect = 0.0
 Identities = 581/941 (61%), Positives = 643/941 (68%), Gaps = 9/941 (0%)
 Frame = +1

Query: 379  EDSRRSRATDKESDXXXXXXXXXXXXXXXXXXXXXIDKRRRRVQEWQXXXXXXXXXXXXX 558
            EDS R ++ D + D                     ++KRRRRVQEWQ             
Sbjct: 237  EDSPRKKSDDDDLDKKERRTREEDLEEEQRKLDEEMEKRRRRVQEWQELKRKREESEREK 296

Query: 559  XGSENGKEDEAMLGKNWTLEGESDDEDAPPKSDKDISVXXXXXXXXXXXXXXXXXXXXXX 738
             G E    DE   GK WTLEGESDDED  P  + +  +                      
Sbjct: 297  LG-EAANADEPKSGKTWTLEGESDDEDVAPTGNSETDLNMDEDAKPTDNEVGDGMAIDSQ 355

Query: 739  XXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSMVLPEVEKLQSAEIAAKPHEKKGIMTKAS 918
                   T                  AFMNSMVLPEVEKL +A ++              
Sbjct: 356  NGTS-ASTLQNGDEGADGDEEIDPLDAFMNSMVLPEVEKLNNAAVSP------------- 401

Query: 919  KEAFSNGDRLRKGEKNAMGRIIPGEDSDSDYXXXXXXXXXXXXXXXXXFMKRVKKTKAEK 1098
                                ++P EDSDSDY                 FMKRVKKTKAE+
Sbjct: 402  ----------------TSNAVVPSEDSDSDYGDLENNEDPLEEEDDDEFMKRVKKTKAER 445

Query: 1099 LSIVDHSKIQYPPFRKNLYIELKEIARMSTEEVSAYRKQLELKIHGKDVPKPIKTWSQAG 1278
            LSIVDHSKI Y PFRKN YIE+KE ARM+ EE++AYRKQLELKIHGKDVPKP+KTW Q G
Sbjct: 446  LSIVDHSKIDYKPFRKNFYIEVKESARMTPEEIAAYRKQLELKIHGKDVPKPVKTWHQTG 505

Query: 1279 LGTKILDTIKKLSFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQP 1458
            L TKILDTIKKL++E+PM IQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQP
Sbjct: 506  LTTKILDTIKKLNYERPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQP 565

Query: 1459 EVVSGEGPVGLVMAPTRELVQQIHNDIKKFAKPLNINCVPVYGGSGVAQQISELKRGTEI 1638
             V+ G+GP+GL+MAPTRELVQQIH+DIKKFAK + I+CVPVYGGSGVAQQISELKRG E+
Sbjct: 566  PVMPGDGPIGLIMAPTRELVQQIHSDIKKFAKVVGISCVPVYGGSGVAQQISELKRGAEV 625

Query: 1639 VVCTPGRMIDILCTSGGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNTRPDRQTVL 1818
            VVCTPGRMIDILCTSGGKITNLRRVT+LVMDEADRMFDMGFEPQITRI+QNTRPDRQTVL
Sbjct: 626  VVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVL 685

Query: 1819 FSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLEILGEWYE 1998
            FSATFPRQVEILAR+VLNKPVEIQVGGRSVVNKDI+QLVEVRPES+RF RLLE+LGEWYE
Sbjct: 686  FSATFPRQVEILARRVLNKPVEIQVGGRSVVNKDISQLVEVRPESERFFRLLELLGEWYE 745

Query: 1999 KGKILVFVHSQDKCDALFRDLLKHSYPCLSLHGAKDQTDRESTISDFKNNVCNLLIATSI 2178
            KGKIL+FVHSQ+KCD+LFRDLLKH YPCLSLHGAKDQTDRESTISDFK+NVCNLLIATS+
Sbjct: 746  KGKILIFVHSQEKCDSLFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSV 805

Query: 2179 AARGLDVKELELVVNFDVPNHYEDYVHRVGRTGRAGRKGCAITFISLEDERYAPDLVKAL 2358
            AARGLDVKELELV+NFDVPNHYEDYVHRVGRTGRAGRKG AITFIS +D RYAPDLVKAL
Sbjct: 806  AARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGSAITFISDDDARYAPDLVKAL 865

Query: 2359 ELSEQAVPADLKALANAFMAKVNQGTEQAHGTGYGGSGFKFNXXXXXXXXXXXXXXXXXY 2538
            ELSEQ VP DLKALA+ FMAKVNQG EQAHGTGYGGSGFKFN                 Y
Sbjct: 866  ELSEQVVPDDLKALADGFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEY 925

Query: 2539 GFXXXXXXXXXXXXGIRKAGGDLXXXXXXXXXXXXXXXXXXXXXXMPTQVVTP------- 2697
            GF            G+RKAGGD+                      MP+ V          
Sbjct: 926  GFEEDKSDSDDEDEGVRKAGGDISQQAALAQIAAIAAASKVGAVSMPSTVPAAQLLPNGG 985

Query: 2698 LPFTXXXXXXXXXXXXXXXXXPS--VTALPGEXXXXXXXXXXXXXXXXXXXXXQAEAMPE 2871
            LP +                 P   +   P +                     QA+AMPE
Sbjct: 986  LPVSLSGVLGLTIPGSVAAAVPGSVLPMTPNDGAARAAALAAAINLQHNLAKIQADAMPE 1045

Query: 2872 HYEAELEINDFPQNARWKITHKETLWPISEWTGAAITTRGQYFPPGKIVGPGERKLYLFI 3051
            HYEAELEINDFPQNARW++THK+TL PISEWTGAAITTRGQY+  GK+ GPGERKLYLFI
Sbjct: 1046 HYEAELEINDFPQNARWRVTHKDTLIPISEWTGAAITTRGQYYTTGKVPGPGERKLYLFI 1105

Query: 3052 EGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQPGKYSVI 3174
            EGPTE SVK+AKAE+KRVLED+T QA++   A QPGKYSV+
Sbjct: 1106 EGPTEQSVKRAKAELKRVLEDFTIQAISNPSAVQPGKYSVV 1146


>ref|XP_006306613.1| hypothetical protein CARUB_v10008128mg [Capsella rubella]
            gi|565497950|ref|XP_006306614.1| hypothetical protein
            CARUB_v10008128mg [Capsella rubella]
            gi|565497952|ref|XP_006306615.1| hypothetical protein
            CARUB_v10008128mg [Capsella rubella]
            gi|482575324|gb|EOA39511.1| hypothetical protein
            CARUB_v10008128mg [Capsella rubella]
            gi|482575325|gb|EOA39512.1| hypothetical protein
            CARUB_v10008128mg [Capsella rubella]
            gi|482575326|gb|EOA39513.1| hypothetical protein
            CARUB_v10008128mg [Capsella rubella]
          Length = 1171

 Score = 1083 bits (2800), Expect = 0.0
 Identities = 577/937 (61%), Positives = 651/937 (69%), Gaps = 2/937 (0%)
 Frame = +1

Query: 370  EGSEDSRRSRATDKESDXXXXXXXXXXXXXXXXXXXXXIDKRRRRVQEWQXXXXXXXXXX 549
            +G+ DS + ++ +++ +                     ++KRRRRVQEWQ          
Sbjct: 248  DGNGDSPKRKSVEEDGEKKEKKTREEELEDEQKKLDEEVEKRRRRVQEWQELKRKQEEAE 307

Query: 550  XXXXGSENGKEDEAMLGKNWTLEGESDDEDA--PPKSDKDISVXXXXXXXXXXXXXXXXX 723
                G  +GKE +A  GK WTL+GESDDE+     KS+ ++ V                 
Sbjct: 308  NEIKGDGDGKEPKA--GKAWTLDGESDDEEGHQEEKSETEMDVDGESKPESGGDAKIVDL 365

Query: 724  XXXXXXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSMVLPEVEKLQSAEIAAKPHEKKGI 903
                       G                   AFMN+MVLPEVEKL ++  A  P    GI
Sbjct: 366  ENETATTVPESG-----GDGAADEDEIDPLDAFMNTMVLPEVEKLSNS--APSPAVNDGI 418

Query: 904  MTKASKEAFSNGDRLRKGEKNAMGRIIPGEDSDSDYXXXXXXXXXXXXXXXXXFMKRVKK 1083
            +  +      +GD+ +KG   A+GRII GEDSDSDY                 FMKRVKK
Sbjct: 419  LD-SKMNGKDSGDQPKKGFNKALGRIIQGEDSDSDYSEPKDDDDPSLEEDDEEFMKRVKK 477

Query: 1084 TKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMSTEEVSAYRKQLELKIHGKDVPKPIKT 1263
            TKAEKLS+VDHSKI+Y PFRKN YIE+K+I+RM+ EEV+AYRK+LELK+HGKDVP+PIK+
Sbjct: 478  TKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQEEVNAYRKELELKVHGKDVPRPIKS 537

Query: 1264 WSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRH 1443
            W Q GL +KILDT+KKL++EKPM IQ QALPIIMSGRDCIG+AKTGSGKTL FVLPMLRH
Sbjct: 538  WHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 597

Query: 1444 IKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKKFAKPLNINCVPVYGGSGVAQQISELK 1623
            IKDQP V +G+GP+GLVMAPTRELVQQIH+DI+KFAKPL I CVPVYGGSGVAQQISELK
Sbjct: 598  IKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFAKPLGIRCVPVYGGSGVAQQISELK 657

Query: 1624 RGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNTRPD 1803
            RGTEIVVCTPGRMIDILCTS GKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQN RP+
Sbjct: 658  RGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPE 717

Query: 1804 RQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLEIL 1983
            RQTVLFSATFPRQVE LARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRF RLLE+L
Sbjct: 718  RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFFRLLELL 777

Query: 1984 GEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCLSLHGAKDQTDRESTISDFKNNVCNLL 2163
            GEWYEKGKIL+FV SQ+KCDALFRD++KH YPCLSLHG KDQTDRESTISDFK NVCNLL
Sbjct: 778  GEWYEKGKILIFVQSQEKCDALFRDMIKHGYPCLSLHGGKDQTDRESTISDFKTNVCNLL 837

Query: 2164 IATSIAARGLDVKELELVVNFDVPNHYEDYVHRVGRTGRAGRKGCAITFISLEDERYAPD 2343
            IATS+AARGLDVKELELVVNFD PNHYEDYVHRVGRTGRAGRKGCA+TFIS +D +YAPD
Sbjct: 838  IATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPD 897

Query: 2344 LVKALELSEQAVPADLKALANAFMAKVNQGTEQAHGTGYGGSGFKFNXXXXXXXXXXXXX 2523
            LVKALELSEQ VP DLKA+A+ FMAKV QG EQAHGTGYGGSGFKFN             
Sbjct: 898  LVKALELSEQPVPDDLKAVADGFMAKVKQGIEQAHGTGYGGSGFKFNEEEEEVRKAAKKA 957

Query: 2524 XXXXYGFXXXXXXXXXXXXGIRKAGGDLXXXXXXXXXXXXXXXXXXXXXXMPTQVVTPLP 2703
                YGF             +RKAGG                            V  P+ 
Sbjct: 958  QAKEYGFEEDKSDSEDENDVVRKAGG---GEISQQQATFAQIAAIAAAAKAAIPVSAPVT 1014

Query: 2704 FTXXXXXXXXXXXXXXXXXPSVTALPGEXXXXXXXXXXXXXXXXXXXXXQAEAMPEHYEA 2883
                                +V   P E                     QA+AMPEHYEA
Sbjct: 1015 ANQLLPNGSGIHAVPGVLPVTVPGNPSEGAGRAAAMVAAMNLQHNLAKIQADAMPEHYEA 1074

Query: 2884 ELEINDFPQNARWKITHKETLWPISEWTGAAITTRGQYFPPGKIVGPGERKLYLFIEGPT 3063
            ELEINDFPQNARWK+THKETL PISEWTGAAITTRGQ++P G+I GPGERKLYLFIEGP+
Sbjct: 1075 ELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQFYPTGRIPGPGERKLYLFIEGPS 1134

Query: 3064 ESSVKKAKAEVKRVLEDYTAQALNLSGASQPGKYSVI 3174
            E SVK AK E+KRVLED T QA++L G +  G+YSVI
Sbjct: 1135 EKSVKTAKVELKRVLEDITNQAMSLPGGATAGRYSVI 1171


>ref|NP_173516.1| DEAD Box RNA Helicase RCF1 [Arabidopsis thaliana]
            gi|108861895|sp|Q8H0U8.2|RH42_ARATH RecName:
            Full=DEAD-box ATP-dependent RNA helicase 42; AltName:
            Full=DEAD-box RNA helicase RCF1; AltName: Full=REGULATOR
            OF CBF GENE EXPRESSION 1
            gi|4836896|gb|AAD30599.1|AC007369_9 Similar to RNA
            helicases [Arabidopsis thaliana]
            gi|332191919|gb|AEE30040.1| DEAD Box RNA Helicase RCF1
            [Arabidopsis thaliana]
          Length = 1166

 Score = 1069 bits (2764), Expect = 0.0
 Identities = 572/900 (63%), Positives = 636/900 (70%), Gaps = 3/900 (0%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKEDEAMLGKNWTLEGESDDEDAPP--KSD 657
            ++KRRRRVQEWQ              G  +G E +A  GK WTLEGESDDE+  P  KS+
Sbjct: 279  VEKRRRRVQEWQELKRKKEEAESESKGDADGNEPKA--GKAWTLEGESDDEEGHPEEKSE 336

Query: 658  KDISVXXXXXXXXXXXXXXXXXXXXXXXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSMV 837
             ++ V                            G                   AFMN+MV
Sbjct: 337  TEMDVDEETKPENDGDAKMVDLENETAATVSESG-----GDGAVDEEEIDPLDAFMNTMV 391

Query: 838  LPEVEKLQSAEIAAKPHEKKGIMTKASKEAFSNGDRLRKGEKNAMGRIIPGEDSDSDYXX 1017
            LPEVEK  +   A  P    G +  +      +GDR +KG   A+GRII GEDSDSDY  
Sbjct: 392  LPEVEKFCNG--APPPAVNDGTLD-SKMNGKESGDRPKKGFNKALGRIIQGEDSDSDYSE 448

Query: 1018 XXXXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMSTEEV 1197
                           FMKRVKKTKAEKLS+VDHSKI+Y PFRKN YIE+K+I+RM+ EEV
Sbjct: 449  PKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQEEV 508

Query: 1198 SAYRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIMSGRD 1377
            + YRK+LELK+HGKDVP+PIK W Q GL +KILDT+KKL++EKPM IQ QALPIIMSGRD
Sbjct: 509  NTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRD 568

Query: 1378 CIGIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKKFAKP 1557
            CIG+AKTGSGKTL FVLPMLRHIKDQP V +G+GP+GLVMAPTRELVQQIH+DI+KF+KP
Sbjct: 569  CIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKP 628

Query: 1558 LNINCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLVMDEA 1737
            L I CVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS GKITNLRRVTFLVMDEA
Sbjct: 629  LGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEA 688

Query: 1738 DRMFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNK 1917
            DRMFDMGFEPQITRIIQN RP+RQTVLFSATFPRQVE LARKVLNKPVEIQVGGRSVVNK
Sbjct: 689  DRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNK 748

Query: 1918 DITQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCLSLHG 2097
            DITQLVEVRPESDRFLRLLE+LGEW EKGKILVFV SQ+KCDAL+RD++K SYPCLSLHG
Sbjct: 749  DITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHG 808

Query: 2098 AKDQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRVGRTG 2277
             KDQTDRESTISDFKN+VCNLLIATS+AARGLDVKELELVVNFD PNHYEDYVHRVGRTG
Sbjct: 809  GKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTG 868

Query: 2278 RAGRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGTEQAHGTG 2457
            RAGRKGCA+TFIS +D +YAPDLVKALELSEQ VP DLKALA+ FM KV QG EQAHGTG
Sbjct: 869  RAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKALADGFMVKVKQGIEQAHGTG 928

Query: 2458 YGGSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKA-GGDLXXXXXXXXX 2634
            YGGSGFKFN                 YGF             +RKA GG++         
Sbjct: 929  YGGSGFKFNEEEEEVRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGGGEISQQQATFAQ 988

Query: 2635 XXXXXXXXXXXXXMPTQVVTPLPFTXXXXXXXXXXXXXXXXXPSVTALPGEXXXXXXXXX 2814
                          P  V  P+                     +V  LP E         
Sbjct: 989  IAAIAAAAKAAAAAP--VSAPVTANQLLANGGGLAAMPGVLPVTVPTLPSEGAGRAAAMV 1046

Query: 2815 XXXXXXXXXXXXQAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWTGAAITTRGQ 2994
                        QA+AMPEHYEAELEINDFPQNARWK+THKETL PISEWTGAAITTRGQ
Sbjct: 1047 AAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQ 1106

Query: 2995 YFPPGKIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQPGKYSVI 3174
            ++P G+I GPGERKLYLFIEGP+E SVK AKAE+KRVLED T QA++       G+YSV+
Sbjct: 1107 FYPTGRIPGPGERKLYLFIEGPSEKSVKHAKAELKRVLEDITNQAMSSLPGGASGRYSVL 1166


>ref|XP_004295131.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Fragaria
            vesca subsp. vesca]
          Length = 1113

 Score = 1066 bits (2757), Expect = 0.0
 Identities = 574/910 (63%), Positives = 638/910 (70%), Gaps = 13/910 (1%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKE--DEAMLGKNWTLEGESDDEDAPPKSD 657
            ++KRRRRVQEWQ                +NG+   DE M GK WTLEGESDDE+  P   
Sbjct: 218  MEKRRRRVQEWQELKRKKEEDDR-----DNGERNADEPMSGKTWTLEGESDDEEVHPSGK 272

Query: 658  KDISVXXXXXXXXXXXXXXXXXXXXXXXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSMV 837
             +                              I +                  AFMNSMV
Sbjct: 273  SETGTNLNGEANLIDKEDGHFMVVYPDNETAPIAS-LNGADNASGDDETDPLDAFMNSMV 331

Query: 838  LPEVEKLQSA---EIAAKPHEKKGIMTKASKEAFSNGDRLRKGEKNAMGRIIPGEDSDSD 1008
            LPEVEKL +A    IA   ++KK        +  SNG++ R+G   +MGRIIPGEDSDSD
Sbjct: 332  LPEVEKLDNAADPSIADAKNDKK--------DDRSNGEQKRRGLNKSMGRIIPGEDSDSD 383

Query: 1009 YXXXXXXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMST 1188
            +                 F+KRVKKTKAEKLS+VDHSKI Y PFRKN YIE+KEI++MS 
Sbjct: 384  FGDIENDDNVLEDENDDEFIKRVKKTKAEKLSVVDHSKIDYEPFRKNFYIEVKEISKMSP 443

Query: 1189 EEVSAYRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIMS 1368
            EEV A RKQLELKIHGKDVPKPIKTW Q GL +KIL+ IKKL+FEKPM IQAQALP+IMS
Sbjct: 444  EEVGACRKQLELKIHGKDVPKPIKTWHQTGLTSKILEIIKKLNFEKPMPIQAQALPVIMS 503

Query: 1369 GRDCIGIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKKF 1548
            GRDCIG+ KTGSGKTLAFVLPMLRHIKDQP V +G+GP+GL+MAPTRELVQQIH+DIK+F
Sbjct: 504  GRDCIGVGKTGSGKTLAFVLPMLRHIKDQPPVEAGDGPIGLIMAPTRELVQQIHSDIKRF 563

Query: 1549 AKPLNINCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLVM 1728
            AK L   CVPVYGGSGVAQQISELKRG EIVVCTPGRMID+LCTSGGKITNLRRVTFLVM
Sbjct: 564  AKVLGFGCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDVLCTSGGKITNLRRVTFLVM 623

Query: 1729 DEADRMFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSV 1908
            DEADRMFDMGFEPQITRI+QN RP RQTVLFSATFPRQVE+LARKVL+KPVEIQVGGRSV
Sbjct: 624  DEADRMFDMGFEPQITRIVQNIRPGRQTVLFSATFPRQVEVLARKVLDKPVEIQVGGRSV 683

Query: 1909 VNKDITQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCLS 2088
            VNKDI Q VE+R E++RFLRLLE+LGEW EKGKIL+FV SQDKCD+LFRDLL+H YPCLS
Sbjct: 684  VNKDIMQKVEMRQENERFLRLLELLGEWNEKGKILIFVQSQDKCDSLFRDLLRHGYPCLS 743

Query: 2089 LHGAKDQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRVG 2268
            LHGAKDQTDRESTISDFK++VCNLLIATSIAARGLDVK+LELV+NF VPNHYEDYVHRVG
Sbjct: 744  LHGAKDQTDRESTISDFKSDVCNLLIATSIAARGLDVKDLELVINFHVPNHYEDYVHRVG 803

Query: 2269 RTGRAGRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGTEQAH 2448
            RTGRAGRKGCAITFIS ED RYAPDLVKALELSEQ VP DLK+LA+ FMAKV QG EQAH
Sbjct: 804  RTGRAGRKGCAITFISEEDARYAPDLVKALELSEQVVPDDLKSLADNFMAKVTQGLEQAH 863

Query: 2449 GTGYGGSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKAGGDLXXXXXXX 2628
            GTGYGGSGFKFN                 YGF            GIRKAGGD+       
Sbjct: 864  GTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEDDKSDSEDEDEGIRKAGGDISQQAALA 923

Query: 2629 XXXXXXXXXXXXXXXM--PTQVVTPLPFTXXXXXXXXXXXXXXXXXPSV---TALP---G 2784
                           M  P      LP                    SV   T LP    
Sbjct: 924  QIAAITAASKANTASMQTPASAAQLLPNGGGSVSHPGVLGQALPGTASVFTGTGLPLGSN 983

Query: 2785 EXXXXXXXXXXXXXXXXXXXXXQAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEW 2964
            +                     QA+AMPEHYEAELEINDFPQNARWK+THKET   IS+W
Sbjct: 984  DGAARAAAIAAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETWGAISDW 1043

Query: 2965 TGAAITTRGQYFPPGKIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSG 3144
            TGAAITTRGQYFPPGK+ GPG+RKLYLFIEGPTE SVK+AK+E+KRVLED +  A +L G
Sbjct: 1044 TGAAITTRGQYFPPGKVAGPGDRKLYLFIEGPTEQSVKRAKSELKRVLEDISNHAFSLPG 1103

Query: 3145 ASQPGKYSVI 3174
             +Q G+Y V+
Sbjct: 1104 GAQQGRYQVL 1113


>ref|XP_006416348.1| hypothetical protein EUTSA_v10006608mg [Eutrema salsugineum]
            gi|567149382|ref|XP_006416349.1| hypothetical protein
            EUTSA_v10006608mg [Eutrema salsugineum]
            gi|557094119|gb|ESQ34701.1| hypothetical protein
            EUTSA_v10006608mg [Eutrema salsugineum]
            gi|557094120|gb|ESQ34702.1| hypothetical protein
            EUTSA_v10006608mg [Eutrema salsugineum]
          Length = 1166

 Score = 1066 bits (2756), Expect = 0.0
 Identities = 567/900 (63%), Positives = 639/900 (71%), Gaps = 3/900 (0%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKEDEAMLGKNWTLEGESDDEDAPP--KSD 657
            ++KRRRRVQEWQ              G  + KE +A  GK WTLEGESDDE+  P  K++
Sbjct: 282  MEKRRRRVQEWQELKRKKEEAESESKGDADDKEPKA--GKAWTLEGESDDEECHPEEKTE 339

Query: 658  KDISVXXXXXXXXXXXXXXXXXXXXXXXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSMV 837
             ++ V                            G                   AFMN+MV
Sbjct: 340  TEMDVDGETKPENGGDAKMVDVENAMSTTVSEKG-----GDGAADEEEIDPLDAFMNAMV 394

Query: 838  LPEVEKLQSAEIAAKPHEKKGIMTKASKEAFSNGDRLRKGEKNAMGRIIPGEDSDSDYXX 1017
            LPEVEKL ++   A P  K GI+  + K     GD+ +KG   ++GRI+ GEDSDSDY  
Sbjct: 395  LPEVEKLSNS---APPVVKDGILD-SEKNGKERGDQPKKGFNKSLGRIMQGEDSDSDYSE 450

Query: 1018 XXXXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMSTEEV 1197
                           FMKRVKKTKAEKLS+VDHSKI+Y  FRKN YIE+K+I+RM+ EEV
Sbjct: 451  PKDDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYESFRKNFYIEVKDISRMTDEEV 510

Query: 1198 SAYRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIMSGRD 1377
            +AYRK+LELK+HGKDVP+PI++W Q GL +KILDT+ KL +EKPM IQ QALPIIMSGRD
Sbjct: 511  TAYRKELELKVHGKDVPRPIRSWHQTGLTSKILDTMNKLKYEKPMPIQTQALPIIMSGRD 570

Query: 1378 CIGIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKKFAKP 1557
            CIG+AKTGSGKTL FVLPMLRHIKDQP V +GEGP+GLVMAPTRELVQQIH+DIKKF+K 
Sbjct: 571  CIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGEGPIGLVMAPTRELVQQIHSDIKKFSKA 630

Query: 1558 LNINCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLVMDEA 1737
            L I CVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS GKITNLRRVTFLVMDEA
Sbjct: 631  LGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEA 690

Query: 1738 DRMFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNK 1917
            DRMFDMGFEPQITRIIQN RPDRQTVLFSATFPRQVE LARKVLNKP+EIQVGGRSVVNK
Sbjct: 691  DRMFDMGFEPQITRIIQNIRPDRQTVLFSATFPRQVETLARKVLNKPIEIQVGGRSVVNK 750

Query: 1918 DITQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCLSLHG 2097
            DI QLVEVRPE +RF RLLE+LGEWYEKGKIL+FV SQ+KCD+LF+D++K SYPCLSLHG
Sbjct: 751  DIAQLVEVRPEGERFFRLLELLGEWYEKGKILIFVQSQEKCDSLFKDMIKRSYPCLSLHG 810

Query: 2098 AKDQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRVGRTG 2277
             KDQTDRESTISDFK+NVC+LLIATSIAARGLDVK+LELVVN+D PNHYEDYVHRVGRTG
Sbjct: 811  GKDQTDRESTISDFKSNVCSLLIATSIAARGLDVKDLELVVNYDAPNHYEDYVHRVGRTG 870

Query: 2278 RAGRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGTEQAHGTG 2457
            RAGRKGCA+TFIS +D +YAPDLVKALELSEQ VP DLKA+A+ FMAKV QG EQAHGTG
Sbjct: 871  RAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKAIADGFMAKVKQGIEQAHGTG 930

Query: 2458 YGGSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKA-GGDLXXXXXXXXX 2634
            YGGSGFKFN                 YGF             +RKA GGD+         
Sbjct: 931  YGGSGFKFNEEEEEVRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGGGDISQQATLAVA 990

Query: 2635 XXXXXXXXXXXXXMPTQVVTPLPFTXXXXXXXXXXXXXXXXXPSVTALPGEXXXXXXXXX 2814
                           +  VT                      P V   PG          
Sbjct: 991  QIAAIAAAAKANAPVSAPVTANQLLPNGGGLAVVPGVLPVTVPGVPDGPGR----AAAMV 1046

Query: 2815 XXXXXXXXXXXXQAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWTGAAITTRGQ 2994
                        QA+AMPEHYEAELEINDFPQNARWK+THKETL PIS+WTGAAITTRGQ
Sbjct: 1047 AAINLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISDWTGAAITTRGQ 1106

Query: 2995 YFPPGKIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQPGKYSVI 3174
            ++PPG+I GPGERKLYLFIEGPTE SVK+AK E+KRVLED T QAL+L G +Q  +YSV+
Sbjct: 1107 FYPPGRIPGPGERKLYLFIEGPTEKSVKQAKVELKRVLEDITTQALSLPGGAQSSRYSVL 1166


>ref|XP_002890415.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
            lyrata] gi|297336257|gb|EFH66674.1| hypothetical protein
            ARALYDRAFT_472328 [Arabidopsis lyrata subsp. lyrata]
          Length = 827

 Score = 1043 bits (2697), Expect = 0.0
 Identities = 542/786 (68%), Positives = 597/786 (75%)
 Frame = +1

Query: 817  AFMNSMVLPEVEKLQSAEIAAKPHEKKGIMTKASKEAFSNGDRLRKGEKNAMGRIIPGED 996
            AFMN+MVLPEVEKL +   A  P    GI+        S+ D+ +KG   A+GRII GED
Sbjct: 47   AFMNTMVLPEVEKLSNG--APPPAVNDGILDSKMNGKESD-DQPKKGFNKALGRIIQGED 103

Query: 997  SDSDYXXXXXXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIA 1176
            SDSDY                 FMKRVKKTKAEKLS+VDHSKI+Y PFRKN YIE+K+I+
Sbjct: 104  SDSDYSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDIS 163

Query: 1177 RMSTEEVSAYRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALP 1356
            RM+ EEV+ YRK+LELK+HGKDVP+PIK W Q GL +KILDT+KKL++EKPM IQ QALP
Sbjct: 164  RMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALP 223

Query: 1357 IIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHND 1536
            IIMSGRDCIG+AKTGSGKTL FVLPMLRHIKDQP V +G+GP+GLVMAPTRELVQQIH+D
Sbjct: 224  IIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSD 283

Query: 1537 IKKFAKPLNINCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVT 1716
            I+KF+KPL I CVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS GKITNLRRVT
Sbjct: 284  IRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVT 343

Query: 1717 FLVMDEADRMFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVG 1896
            FLVMDEADRMFDMGFEPQITRIIQN RP+RQTVLFSATFPRQVE LARKVLNKPVEIQVG
Sbjct: 344  FLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVG 403

Query: 1897 GRSVVNKDITQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSY 2076
            GRSVVNKDITQLVEVRPESDRF RLLE+LGEWYEKGKILVFV SQ+KCDAL+RD++K SY
Sbjct: 404  GRSVVNKDITQLVEVRPESDRFFRLLELLGEWYEKGKILVFVQSQEKCDALYRDMIKSSY 463

Query: 2077 PCLSLHGAKDQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYV 2256
            PCLSLHG KDQTDRESTISDFK+NVCNLLIATS+AARGLDVKELELVVNFD PNHYEDYV
Sbjct: 464  PCLSLHGGKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYV 523

Query: 2257 HRVGRTGRAGRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGT 2436
            HRVGRTGRAGRKGCA+TFIS +D +YAPDLVKALELSEQ VP DLKALA+ FMAKV QG 
Sbjct: 524  HRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKALADGFMAKVKQGI 583

Query: 2437 EQAHGTGYGGSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKAGGDLXXX 2616
            EQAHGTGYGGSGFKFN                 YGF             +RKAGG     
Sbjct: 584  EQAHGTGYGGSGFKFNEEEEEVRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGGGEISQ 643

Query: 2617 XXXXXXXXXXXXXXXXXXXMPTQVVTPLPFTXXXXXXXXXXXXXXXXXPSVTALPGEXXX 2796
                                P  V  P+                     +V  LP E   
Sbjct: 644  QQATFAQIAAIAAAAKAAAAP--VSAPVTANQLLPNGGGLAAMPGVLPVTVPTLPSEGAG 701

Query: 2797 XXXXXXXXXXXXXXXXXXQAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWTGAA 2976
                              QA+AMPEHYEAELEINDFPQNARWK+THKETL PISEWTGAA
Sbjct: 702  RAAAMVAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAA 761

Query: 2977 ITTRGQYFPPGKIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQP 3156
            ITTRGQ++P G+I GPGERKLYLFIEGP+E SVK+AK E+KRVLED T QA++       
Sbjct: 762  ITTRGQFYPTGRIPGPGERKLYLFIEGPSEKSVKQAKVELKRVLEDITNQAMSSLPGGAT 821

Query: 3157 GKYSVI 3174
            G+YSV+
Sbjct: 822  GRYSVL 827


>ref|NP_001077571.1| DEAD Box RNA Helicase RCF1 [Arabidopsis thaliana]
            gi|332191920|gb|AEE30041.1| DEAD Box RNA Helicase RCF1
            [Arabidopsis thaliana]
          Length = 828

 Score = 1038 bits (2685), Expect = 0.0
 Identities = 541/787 (68%), Positives = 597/787 (75%), Gaps = 1/787 (0%)
 Frame = +1

Query: 817  AFMNSMVLPEVEKLQSAEIAAKPHEKKGIMTKASKEAFSNGDRLRKGEKNAMGRIIPGED 996
            AFMN+MVLPEVEK  +   A  P    G +  +      +GDR +KG   A+GRII GED
Sbjct: 47   AFMNTMVLPEVEKFCNG--APPPAVNDGTLD-SKMNGKESGDRPKKGFNKALGRIIQGED 103

Query: 997  SDSDYXXXXXXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIA 1176
            SDSDY                 FMKRVKKTKAEKLS+VDHSKI+Y PFRKN YIE+K+I+
Sbjct: 104  SDSDYSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDIS 163

Query: 1177 RMSTEEVSAYRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALP 1356
            RM+ EEV+ YRK+LELK+HGKDVP+PIK W Q GL +KILDT+KKL++EKPM IQ QALP
Sbjct: 164  RMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALP 223

Query: 1357 IIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHND 1536
            IIMSGRDCIG+AKTGSGKTL FVLPMLRHIKDQP V +G+GP+GLVMAPTRELVQQIH+D
Sbjct: 224  IIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSD 283

Query: 1537 IKKFAKPLNINCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVT 1716
            I+KF+KPL I CVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS GKITNLRRVT
Sbjct: 284  IRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVT 343

Query: 1717 FLVMDEADRMFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVG 1896
            FLVMDEADRMFDMGFEPQITRIIQN RP+RQTVLFSATFPRQVE LARKVLNKPVEIQVG
Sbjct: 344  FLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVG 403

Query: 1897 GRSVVNKDITQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSY 2076
            GRSVVNKDITQLVEVRPESDRFLRLLE+LGEW EKGKILVFV SQ+KCDAL+RD++K SY
Sbjct: 404  GRSVVNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSY 463

Query: 2077 PCLSLHGAKDQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYV 2256
            PCLSLHG KDQTDRESTISDFKN+VCNLLIATS+AARGLDVKELELVVNFD PNHYEDYV
Sbjct: 464  PCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYV 523

Query: 2257 HRVGRTGRAGRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGT 2436
            HRVGRTGRAGRKGCA+TFIS +D +YAPDLVKALELSEQ VP DLKALA+ FM KV QG 
Sbjct: 524  HRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKALADGFMVKVKQGI 583

Query: 2437 EQAHGTGYGGSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKA-GGDLXX 2613
            EQAHGTGYGGSGFKFN                 YGF             +RKA GG++  
Sbjct: 584  EQAHGTGYGGSGFKFNEEEEEVRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGGGEISQ 643

Query: 2614 XXXXXXXXXXXXXXXXXXXXMPTQVVTPLPFTXXXXXXXXXXXXXXXXXPSVTALPGEXX 2793
                                 P  V  P+                     +V  LP E  
Sbjct: 644  QQATFAQIAAIAAAAKAAAAAP--VSAPVTANQLLANGGGLAAMPGVLPVTVPTLPSEGA 701

Query: 2794 XXXXXXXXXXXXXXXXXXXQAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWTGA 2973
                               QA+AMPEHYEAELEINDFPQNARWK+THKETL PISEWTGA
Sbjct: 702  GRAAAMVAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGA 761

Query: 2974 AITTRGQYFPPGKIVGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQ 3153
            AITTRGQ++P G+I GPGERKLYLFIEGP+E SVK AKAE+KRVLED T QA++      
Sbjct: 762  AITTRGQFYPTGRIPGPGERKLYLFIEGPSEKSVKHAKAELKRVLEDITNQAMSSLPGGA 821

Query: 3154 PGKYSVI 3174
             G+YSV+
Sbjct: 822  SGRYSVL 828


>ref|XP_006349887.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Solanum
            tuberosum]
          Length = 1115

 Score =  957 bits (2474), Expect = 0.0
 Identities = 495/708 (69%), Positives = 543/708 (76%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKEDEAMLGKNWTLEGESDDEDAPPKSDKD 663
            ++KRRRRVQEWQ              G + G E E  LGK WTL+GESDDEDA  K+  D
Sbjct: 218  MEKRRRRVQEWQELKRKKEESERETLGVDAGAE-EPKLGKTWTLDGESDDEDAEGKTGMD 276

Query: 664  ISVXXXXXXXXXXXXXXXXXXXXXXXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSMVLP 843
            I +                           I                    AFMN MVLP
Sbjct: 277  IDMDDSGKVMDDEIGADKVVSSSIGSDSPVIQN---GGDGLVDDDEIDPLDAFMNDMVLP 333

Query: 844  EVEKLQSAEIAAKPHEKKGIMTKASKEAFSNGDRLRKGEKNAMGRIIPGEDSDSDYXXXX 1023
            EVEKL  + + +   E   +     K      ++ +   K  MGRIIPGEDSDSDY    
Sbjct: 334  EVEKLNKSVVNSLDGENSSLK---EKNGLRKEEKPKMSMKKTMGRIIPGEDSDSDYGNVE 390

Query: 1024 XXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMSTEEVSA 1203
                         FMKRVKKTKAEKLS+VDHSKI+YPPFRKN YIE+KEI+R+S EEVS 
Sbjct: 391  NDEDPLEEEDDEEFMKRVKKTKAEKLSLVDHSKIEYPPFRKNFYIEVKEISRISAEEVST 450

Query: 1204 YRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIMSGRDCI 1383
            YRKQLELKIHGKDVPKPIKTW Q GL +K+LDTIKKL++EKPMSIQAQALP+IMSGRDCI
Sbjct: 451  YRKQLELKIHGKDVPKPIKTWHQTGLSSKMLDTIKKLNYEKPMSIQAQALPVIMSGRDCI 510

Query: 1384 GIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKKFAKPLN 1563
            GIAKTGSGKTLAFVLPMLRHIKDQP ++SG+GP+GL+MAPTRELVQQIH+DIKKFA+ + 
Sbjct: 511  GIAKTGSGKTLAFVLPMLRHIKDQPPLMSGDGPIGLIMAPTRELVQQIHSDIKKFARVMG 570

Query: 1564 INCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLVMDEADR 1743
            + CVPVYGGSGVAQQISELKRG EIVVCTPGRMIDILCTSGGKITNLRRVT+LVMDEADR
Sbjct: 571  LTCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADR 630

Query: 1744 MFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDI 1923
            MFDMGFEPQITRI+QNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDI
Sbjct: 631  MFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDI 690

Query: 1924 TQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCLSLHGAK 2103
            TQLVEVRPESDRFLRLLE+LGEWYEKGKIL+FVH+Q+KCDALFRD++KH YPCLSLHGAK
Sbjct: 691  TQLVEVRPESDRFLRLLELLGEWYEKGKILIFVHTQEKCDALFRDMIKHGYPCLSLHGAK 750

Query: 2104 DQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRVGRTGRA 2283
            DQTDRESTISDFK+NVCNLLIATSIAARGLDVKELELV+N+DVPNHYEDYVHRVGRTGRA
Sbjct: 751  DQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINYDVPNHYEDYVHRVGRTGRA 810

Query: 2284 GRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGTEQAHGTGYG 2463
            G+KGCAITFIS +D RYAPDL+KAL+LSEQ VP DLKALA+ FMAKVNQG EQAHGTGYG
Sbjct: 811  GKKGCAITFISEDDARYAPDLLKALQLSEQVVPDDLKALADGFMAKVNQGLEQAHGTGYG 870

Query: 2464 GSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKAGGDL 2607
            GSGFKFN                 YGF            GIRKAGGDL
Sbjct: 871  GSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDEGIRKAGGDL 918



 Score =  189 bits (479), Expect = 1e-44
 Identities = 89/108 (82%), Positives = 99/108 (91%)
 Frame = +1

Query: 2851 QAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWTGAAITTRGQYFPPGKIVGPGE 3030
            QA+AMPEHYEAELEINDFPQNARWK+THKETL PISEWTGAAITTRGQY PPGK+ G GE
Sbjct: 1008 QADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQYVPPGKVPGFGE 1067

Query: 3031 RKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQPGKYSVI 3174
            RKLYLFIEGPTE SVK+AKAE+KRVLED T QA +L G++QPG+YSV+
Sbjct: 1068 RKLYLFIEGPTEQSVKRAKAELKRVLEDITMQASSLPGSAQPGRYSVV 1115


>ref|XP_004252969.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
            [Solanum lycopersicum] gi|460415245|ref|XP_004252970.1|
            PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like
            isoform 2 [Solanum lycopersicum]
          Length = 1147

 Score =  956 bits (2472), Expect = 0.0
 Identities = 497/708 (70%), Positives = 544/708 (76%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKEDEAMLGKNWTLEGESDDEDAPPKSDKD 663
            ++KRRRRVQEWQ              G + G E E  LGK WTL+GESDDEDA  K+  D
Sbjct: 250  MEKRRRRVQEWQELKRKKEESERETLGVDAGAE-EPKLGKTWTLDGESDDEDAEGKTGMD 308

Query: 664  ISVXXXXXXXXXXXXXXXXXXXXXXXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSMVLP 843
            I                             I                    AFMN MVLP
Sbjct: 309  IDRDDTGKVMDDENGAGKVVSSSIGSDSPVIQN---GGDGLVDDDEIDPLDAFMNDMVLP 365

Query: 844  EVEKLQSAEIAAKPHEKKGIMTKASKEAFSNGDRLRKGEKNAMGRIIPGEDSDSDYXXXX 1023
            EVEKL  + + +   E   +  K         ++ +   K  MGRIIPGEDSDSDY    
Sbjct: 366  EVEKLNKSVVNSLDGENSSMKEKNGPR---KEEKPKMSMKKTMGRIIPGEDSDSDYGNVE 422

Query: 1024 XXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMSTEEVSA 1203
                         FMKRVKKTKAEKLS+VDHSKI+YPPFRKN YIE+KEI+R+S EEVSA
Sbjct: 423  NDEDPLEEEDDEEFMKRVKKTKAEKLSLVDHSKIEYPPFRKNFYIEVKEISRISAEEVSA 482

Query: 1204 YRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIMSGRDCI 1383
            YRKQLELKIHGKDVPKPIKTW Q GL +K+LDTIKKL++EKPMSIQAQALP+IMSGRDCI
Sbjct: 483  YRKQLELKIHGKDVPKPIKTWHQTGLSSKMLDTIKKLNYEKPMSIQAQALPVIMSGRDCI 542

Query: 1384 GIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKKFAKPLN 1563
            GIAKTGSGKTLAFVLPMLRHIKDQP ++SG+GP+GL+MAPTRELVQQIH+DIKKFA+ + 
Sbjct: 543  GIAKTGSGKTLAFVLPMLRHIKDQPPLMSGDGPIGLIMAPTRELVQQIHSDIKKFARVMG 602

Query: 1564 INCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLVMDEADR 1743
            + CVPVYGGSGVAQQISELKRG EIVVCTPGRMIDILCTSGGKITNLRRVT+LVMDEADR
Sbjct: 603  LTCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADR 662

Query: 1744 MFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDI 1923
            MFDMGFEPQITRI+QNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDI
Sbjct: 663  MFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDI 722

Query: 1924 TQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCLSLHGAK 2103
            TQLVEVRPESDRFLRLLE+LGEWYEKGKIL+FVH+Q+KCDALF+DLLKH YPCLSLHGAK
Sbjct: 723  TQLVEVRPESDRFLRLLELLGEWYEKGKILIFVHTQEKCDALFKDLLKHGYPCLSLHGAK 782

Query: 2104 DQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRVGRTGRA 2283
            DQTDRESTISDFK+NVCNLLIATSIAARGLDVKELELV+N+DVPNHYEDYVHRVGRTGRA
Sbjct: 783  DQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINYDVPNHYEDYVHRVGRTGRA 842

Query: 2284 GRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGTEQAHGTGYG 2463
            G+KGCAITFIS +D RYAPDL+KAL+LSEQ VP DLKALA++FMAKVNQG EQAHGTGYG
Sbjct: 843  GKKGCAITFISEDDARYAPDLLKALQLSEQVVPDDLKALADSFMAKVNQGLEQAHGTGYG 902

Query: 2464 GSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKAGGDL 2607
            GSGFKFN                 YGF            GIRKAGGDL
Sbjct: 903  GSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDEGIRKAGGDL 950



 Score =  189 bits (479), Expect = 1e-44
 Identities = 89/108 (82%), Positives = 99/108 (91%)
 Frame = +1

Query: 2851 QAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWTGAAITTRGQYFPPGKIVGPGE 3030
            QA+AMPEHYEAELEINDFPQNARWK+THKETL PISEWTGAAITTRGQY PPGK+ G GE
Sbjct: 1040 QADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQYVPPGKVPGFGE 1099

Query: 3031 RKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQPGKYSVI 3174
            RKLYLFIEGPTE SVK+AKAE+KRVLED T QA +L G++QPG+YSV+
Sbjct: 1100 RKLYLFIEGPTEQSVKRAKAELKRVLEDITMQASSLPGSAQPGRYSVV 1147


>gb|EXB56258.1| DEAD-box ATP-dependent RNA helicase 42 [Morus notabilis]
          Length = 1140

 Score =  946 bits (2445), Expect = 0.0
 Identities = 490/708 (69%), Positives = 541/708 (76%)
 Frame = +1

Query: 484  IDKRRRRVQEWQXXXXXXXXXXXXXXGSENGKEDEAMLGKNWTLEGESDDEDAPPKSDKD 663
            ++KRRRRVQEWQ              G  N +E ++  GK WTLEGESDDE+ P     +
Sbjct: 239  MEKRRRRVQEWQELRRKKEEAETEKQGEANAEEPKS--GKTWTLEGESDDEEVPSTGKVE 296

Query: 664  ISVXXXXXXXXXXXXXXXXXXXXXXXXXXHIGTKXXXXXXXXXXXXXXXXXAFMNSMVLP 843
             ++                                                AFMNSMVLP
Sbjct: 297  TAMEIDGEANPNKGVTDEMAIDSENGSAP--SALQNGVDGTSGDEEIDPLDAFMNSMVLP 354

Query: 844  EVEKLQSAEIAAKPHEKKGIMTKASKEAFSNGDRLRKGEKNAMGRIIPGEDSDSDYXXXX 1023
            EVEKL +A   A    K   + K  K+  S  +  RKG   +MGRIIPGEDS+SDY    
Sbjct: 355  EVEKLNNASEPASIDGKSLDLNKDKKDDQSKDEPWRKGPNKSMGRIIPGEDSESDYEDVE 414

Query: 1024 XXXXXXXXXXXXXFMKRVKKTKAEKLSIVDHSKIQYPPFRKNLYIELKEIARMSTEEVSA 1203
                         FMKRVKKTKAEKLSIVDHSKI Y PFRKN YIE+KEI+RM+ EEVSA
Sbjct: 415  NDGDPLEDEDDDEFMKRVKKTKAEKLSIVDHSKIDYIPFRKNFYIEVKEISRMTPEEVSA 474

Query: 1204 YRKQLELKIHGKDVPKPIKTWSQAGLGTKILDTIKKLSFEKPMSIQAQALPIIMSGRDCI 1383
            YRKQLELK+HGKDVPKP+KTW Q GL +KIL+TI+KL++EKPM IQAQALP+IMSGRDCI
Sbjct: 475  YRKQLELKLHGKDVPKPMKTWHQTGLTSKILETIRKLNYEKPMPIQAQALPVIMSGRDCI 534

Query: 1384 GIAKTGSGKTLAFVLPMLRHIKDQPEVVSGEGPVGLVMAPTRELVQQIHNDIKKFAKPLN 1563
            GIAKTGSGKTLAFVLPMLRHIKDQP VV+G+GP+GL+MAPTRELVQQIH+D+KKF+K L 
Sbjct: 535  GIAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDVKKFSKVLG 594

Query: 1564 INCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTFLVMDEADR 1743
            + CVPVYGGSGVAQQISELKRG EIVVCTPGRMIDILCTSGGKITNLRRVT+LVMDEADR
Sbjct: 595  LRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADR 654

Query: 1744 MFDMGFEPQITRIIQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDI 1923
            MFDMGFEPQITRI+QN RPDRQTVLFSATFPRQVEILAR+VLNKPVEIQVGGRSVVNKDI
Sbjct: 655  MFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARRVLNKPVEIQVGGRSVVNKDI 714

Query: 1924 TQLVEVRPESDRFLRLLEILGEWYEKGKILVFVHSQDKCDALFRDLLKHSYPCLSLHGAK 2103
            TQLVEVR E++RFLRLLE+LGEWYEKGKIL+FVHSQ+KCDALF+DLL+H YPCLSLHGAK
Sbjct: 715  TQLVEVRHENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFKDLLRHGYPCLSLHGAK 774

Query: 2104 DQTDRESTISDFKNNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRVGRTGRA 2283
            DQTDRESTISDFK+NVCNLLIATSIAARGLDVKELELV+NFDVPNHYEDYVHRVGRTGRA
Sbjct: 775  DQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRA 834

Query: 2284 GRKGCAITFISLEDERYAPDLVKALELSEQAVPADLKALANAFMAKVNQGTEQAHGTGYG 2463
            GRKGCAITFIS +D RYAPDLVKALELSEQ VP DLKALA+ FMAKVNQG EQAHGTGYG
Sbjct: 835  GRKGCAITFISEDDARYAPDLVKALELSEQVVPDDLKALADGFMAKVNQGLEQAHGTGYG 894

Query: 2464 GSGFKFNXXXXXXXXXXXXXXXXXYGFXXXXXXXXXXXXGIRKAGGDL 2607
            GSGFKFN                 YGF            G+RKAGG++
Sbjct: 895  GSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDGGVRKAGGEI 942



 Score =  197 bits (501), Expect = 3e-47
 Identities = 92/108 (85%), Positives = 101/108 (93%)
 Frame = +1

Query: 2851 QAEAMPEHYEAELEINDFPQNARWKITHKETLWPISEWTGAAITTRGQYFPPGKIVGPGE 3030
            QA+AMPEHYEAELEINDFPQNARWK+THKETL PISEWTGAAITTRGQYFPPGK+ GPGE
Sbjct: 1033 QADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQYFPPGKVTGPGE 1092

Query: 3031 RKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALNLSGASQPGKYSVI 3174
            RKLYLFIEGP+E SVKKAKAE+KRVLED + QAL+L G +QPGKYSV+
Sbjct: 1093 RKLYLFIEGPSEQSVKKAKAELKRVLEDISHQALSLPGGNQPGKYSVV 1140