BLASTX nr result

ID: Zingiber23_contig00011174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00011174
         (640 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004969990.1| PREDICTED: trithorax group protein osa-like ...    64   3e-08
ref|XP_002458505.1| hypothetical protein SORBIDRAFT_03g034890 [S...    64   5e-08
gb|AFW85062.1| putative DUF1421 domain family protein [Zea mays]       62   1e-07
ref|NP_001169238.1| uncharacterized protein LOC100383096 [Zea ma...    62   1e-07
gb|ESW04653.1| hypothetical protein PHAVU_011G113900g [Phaseolus...    58   2e-06
ref|XP_006644725.1| PREDICTED: mediator of RNA polymerase II tra...    57   5e-06
ref|XP_006644724.1| PREDICTED: mediator of RNA polymerase II tra...    57   5e-06

>ref|XP_004969990.1| PREDICTED: trithorax group protein osa-like [Setaria italica]
          Length = 590

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 39/97 (40%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
 Frame = +1

Query: 1   DKPDTGNQQLALTLPRQTVPTVLPAGNSQPVQQYKELAMXXXXXXXXXXXXXXIMTSQAA 180
           +KPDT  QQLAL LP Q   T L    S+ VQQYK+L                 + SQA 
Sbjct: 189 EKPDTSGQQLALVLPHQVNQTSLAPRASEAVQQYKDLPAQQSAPAPPVPQQDRYVLSQAI 248

Query: 181 NYYGQHLTV-LQDQRNQPVQPEQQYMQPRSQLQDRPI 288
            YY Q     +QD + Q +QPE QY+  R   QD P+
Sbjct: 249 VYYPQRQAPGIQDTQGQQLQPEVQYLPARPPAQDVPV 285


>ref|XP_002458505.1| hypothetical protein SORBIDRAFT_03g034890 [Sorghum bicolor]
           gi|241930480|gb|EES03625.1| hypothetical protein
           SORBIDRAFT_03g034890 [Sorghum bicolor]
          Length = 587

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
 Frame = +1

Query: 1   DKPDTGNQQLALTLPRQ-TVPTVLPAGNSQPVQQYKELAMXXXXXXXXXXXXXXIMTSQA 177
           + PDT NQQLAL LP Q  +P++ P   S+ VQQYK+  +               + SQA
Sbjct: 189 ENPDTSNQQLALVLPHQVNLPSLAPRA-SESVQQYKDQPVQQSAPTPPVPQQDRYVLSQA 247

Query: 178 ANYYGQ-HLTVLQDQRNQPVQPEQQYMQPRSQLQDRPI 288
             YY Q     +QD + QP+QPE QY+  R   QD P+
Sbjct: 248 IVYYPQCQAPGIQDTQGQPLQPEVQYLPSRPAAQDVPV 285


>gb|AFW85062.1| putative DUF1421 domain family protein [Zea mays]
          Length = 584

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
 Frame = +1

Query: 1   DKPDTGNQQLALTLPRQ-TVPTVLPAGNSQPVQQYKELAMXXXXXXXXXXXXXXIMTSQA 177
           + PDT NQQLAL LP Q  +P++ P   S+ VQQYK   +               + SQA
Sbjct: 184 ENPDTSNQQLALVLPHQVNLPSLAPRA-SESVQQYKNQPVQPSDPTPPVPQQDRYVLSQA 242

Query: 178 ANYYGQHLTV-LQDQRNQPVQPEQQYMQPRSQLQDRPI 288
             YY Q     +QD + Q +QPE QY+  RS  QD P+
Sbjct: 243 IVYYPQRQAPGIQDTQGQKLQPEVQYLPARSPAQDVPV 280


>ref|NP_001169238.1| uncharacterized protein LOC100383096 [Zea mays]
           gi|223975727|gb|ACN32051.1| unknown [Zea mays]
          Length = 507

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
 Frame = +1

Query: 1   DKPDTGNQQLALTLPRQ-TVPTVLPAGNSQPVQQYKELAMXXXXXXXXXXXXXXIMTSQA 177
           + PDT NQQLAL LP Q  +P++ P   S+ VQQYK   +               + SQA
Sbjct: 107 ENPDTSNQQLALVLPHQVNLPSLAPRA-SESVQQYKNQPVQPSDPTPPVPQQDRYVLSQA 165

Query: 178 ANYYGQHLTV-LQDQRNQPVQPEQQYMQPRSQLQDRPI 288
             YY Q     +QD + Q +QPE QY+  RS  QD P+
Sbjct: 166 IVYYPQRQAPGIQDTQGQKLQPEVQYLPARSPAQDVPV 203


>gb|ESW04653.1| hypothetical protein PHAVU_011G113900g [Phaseolus vulgaris]
          Length = 541

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 26/49 (53%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
 Frame = +1

Query: 457 NP-APEMFPSSMPMQAPNPAIPQPGGIRPEAFAYGYGGTGNSVSQPSPP 600
           NP A E  P+SMPMQ P   +P PG  RP+   YGYGG+G +V Q  PP
Sbjct: 355 NPSAAETLPNSMPMQGPYSGVPPPGSSRPDTIPYGYGGSGRTVPQQPPP 403


>ref|XP_006644725.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15-like isoform X2 [Oryza brachyantha]
          Length = 586

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
 Frame = +1

Query: 1   DKPDTGNQQLALTLPRQTVPTVLPAGNSQPVQQYKELAMXXXXXXXXXXXXXXIMTSQAA 180
           +K D   QQLA+ LP Q   + L    S+PVQQYK+  +               + SQA 
Sbjct: 183 EKADASGQQLAIVLPHQVNSSSLAPRASEPVQQYKDQTVQQPAPSSSVPQQDRYVLSQAI 242

Query: 181 NYYGQHLTV-LQDQRNQPVQPEQQYMQPR-SQLQDRPI 288
            YY Q     +QD + Q VQPE QY+  R S  QD P+
Sbjct: 243 VYYPQRQAPGIQDTQGQQVQPEVQYLPVRPSATQDVPV 280


>ref|XP_006644724.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15-like isoform X1 [Oryza brachyantha]
          Length = 587

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
 Frame = +1

Query: 1   DKPDTGNQQLALTLPRQTVPTVLPAGNSQPVQQYKELAMXXXXXXXXXXXXXXIMTSQAA 180
           +K D   QQLA+ LP Q   + L    S+PVQQYK+  +               + SQA 
Sbjct: 184 EKADASGQQLAIVLPHQVNSSSLAPRASEPVQQYKDQTVQQPAPSSSVPQQDRYVLSQAI 243

Query: 181 NYYGQHLTV-LQDQRNQPVQPEQQYMQPR-SQLQDRPI 288
            YY Q     +QD + Q VQPE QY+  R S  QD P+
Sbjct: 244 VYYPQRQAPGIQDTQGQQVQPEVQYLPVRPSATQDVPV 281


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