BLASTX nr result
ID: Zingiber23_contig00011133
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00011133
(454 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001059935.1| Os07g0549800 [Oryza sativa Japonica Group] g... 108 6e-22
gb|EAZ04269.1| hypothetical protein OsI_26412 [Oryza sativa Indi... 108 6e-22
ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein ... 107 1e-21
ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding prote... 107 2e-21
ref|XP_006657815.1| PREDICTED: glycine-rich RNA-binding protein ... 105 5e-21
ref|XP_002460835.1| hypothetical protein SORBIDRAFT_02g035890 [S... 105 6e-21
gb|EMJ13415.1| hypothetical protein PRUPE_ppa013115mg [Prunus pe... 104 1e-20
ref|XP_002316957.1| RNA-binding family protein [Populus trichoca... 104 1e-20
gb|ESW05028.1| hypothetical protein PHAVU_011G145700g [Phaseolus... 104 1e-20
ref|XP_006851173.1| hypothetical protein AMTR_s00043p00170970 [A... 104 1e-20
gb|AFK43918.1| unknown [Lotus japonicus] 103 2e-20
ref|NP_001148723.1| ELAV-like protein 4 [Zea mays] gi|195621654|... 103 2e-20
ref|XP_003540046.1| PREDICTED: glycine-rich RNA-binding protein ... 103 2e-20
dbj|BAK04472.1| predicted protein [Hordeum vulgare subsp. vulgare] 103 2e-20
gb|EPS66753.1| hypothetical protein M569_08025, partial [Genlise... 102 5e-20
ref|XP_004505422.1| PREDICTED: nucleolysin TIA-1 isoform p40-lik... 102 5e-20
ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein ... 102 5e-20
gb|EOY12680.1| RNA-binding family protein [Theobroma cacao] 102 7e-20
gb|AFK44512.1| unknown [Medicago truncatula] 102 7e-20
ref|XP_006370586.1| hypothetical protein POPTR_0001s44050g [Popu... 101 9e-20
>ref|NP_001059935.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|28564803|dbj|BAC57733.1| RNA recognition motif
(RRM)-containing protein-like [Oryza sativa Japonica
Group] gi|113611471|dbj|BAF21849.1| Os07g0549800 [Oryza
sativa Japonica Group] gi|125600644|gb|EAZ40220.1|
hypothetical protein OsJ_24665 [Oryza sativa Japonica
Group] gi|215767980|dbj|BAH00209.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 133
Score = 108 bits (271), Expect = 6e-22
Identities = 50/55 (90%), Positives = 54/55 (98%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFGQVI ARV+TDRISGYS+GFGFV+YAT+EEAGEGIKGMDGKFLDGWVIFAEYA
Sbjct: 57 KFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGMDGKFLDGWVIFAEYA 111
>gb|EAZ04269.1| hypothetical protein OsI_26412 [Oryza sativa Indica Group]
Length = 133
Score = 108 bits (271), Expect = 6e-22
Identities = 50/55 (90%), Positives = 54/55 (98%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFGQVI ARV+TDRISGYS+GFGFV+YAT+EEAGEGIKGMDGKFLDGWVIFAEYA
Sbjct: 57 KFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGMDGKFLDGWVIFAEYA 111
>ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|147854770|emb|CAN78606.1| hypothetical protein
VITISV_024164 [Vitis vinifera]
gi|302143178|emb|CBI20473.3| unnamed protein product
[Vitis vinifera]
Length = 135
Score = 107 bits (268), Expect = 1e-21
Identities = 49/55 (89%), Positives = 53/55 (96%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFGQV+NARVVTDR+SGYSKGFGFVRY +LE+A EGIKGMDGKFLDGWVIFAEYA
Sbjct: 63 KFGQVVNARVVTDRVSGYSKGFGFVRYVSLEDAAEGIKGMDGKFLDGWVIFAEYA 117
>ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 138
Score = 107 bits (266), Expect = 2e-21
Identities = 49/55 (89%), Positives = 53/55 (96%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFGQV ARV+TDRISGYS+GFGFV+YAT+EEAGEGIKGMDGKFLDGWVIFAEYA
Sbjct: 62 KFGQVTEARVITDRISGYSRGFGFVKYATVEEAGEGIKGMDGKFLDGWVIFAEYA 116
>ref|XP_006657815.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Oryza brachyantha]
Length = 130
Score = 105 bits (263), Expect = 5e-21
Identities = 49/55 (89%), Positives = 53/55 (96%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFGQVI ARV+TDRISGYS+GFGFV+YAT+ EAGEGIKGMDGKFLDGWVIFAEYA
Sbjct: 57 KFGQVIEARVITDRISGYSRGFGFVKYATVIEAGEGIKGMDGKFLDGWVIFAEYA 111
>ref|XP_002460835.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
gi|241924212|gb|EER97356.1| hypothetical protein
SORBIDRAFT_02g035890 [Sorghum bicolor]
Length = 131
Score = 105 bits (262), Expect = 6e-21
Identities = 48/55 (87%), Positives = 53/55 (96%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFGQVI ARV+TDRISGYS+GFGFV+YAT++EAGE IKGMDGKFLDGWVIFAEYA
Sbjct: 58 KFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKGMDGKFLDGWVIFAEYA 112
>gb|EMJ13415.1| hypothetical protein PRUPE_ppa013115mg [Prunus persica]
Length = 139
Score = 104 bits (260), Expect = 1e-20
Identities = 47/55 (85%), Positives = 54/55 (98%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
+FG+V++ARVVTDR+SGYSKGFGFVRYATLE+AG+GI GMDGKFLDGWVIFAEYA
Sbjct: 65 QFGEVVHARVVTDRVSGYSKGFGFVRYATLEDAGKGIDGMDGKFLDGWVIFAEYA 119
>ref|XP_002316957.1| RNA-binding family protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| RNA-binding family protein
[Populus trichocarpa]
Length = 153
Score = 104 bits (260), Expect = 1e-20
Identities = 47/55 (85%), Positives = 53/55 (96%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFG+V+ ARVVTDR+SGYSKGFGFV+YATLE+A EGIKGMDG+FLDGWVIFAEYA
Sbjct: 77 KFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGMDGQFLDGWVIFAEYA 131
>gb|ESW05028.1| hypothetical protein PHAVU_011G145700g [Phaseolus vulgaris]
Length = 144
Score = 104 bits (259), Expect = 1e-20
Identities = 47/55 (85%), Positives = 54/55 (98%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFG+V++ARVVTDR+SGYSKGFGFV+YATLEEA +GI+GMDGKFLDGWVIFAEYA
Sbjct: 71 KFGEVVHARVVTDRVSGYSKGFGFVQYATLEEAAKGIEGMDGKFLDGWVIFAEYA 125
>ref|XP_006851173.1| hypothetical protein AMTR_s00043p00170970 [Amborella trichopoda]
gi|548854853|gb|ERN12754.1| hypothetical protein
AMTR_s00043p00170970 [Amborella trichopoda]
Length = 93
Score = 104 bits (259), Expect = 1e-20
Identities = 48/55 (87%), Positives = 52/55 (94%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFGQV++ARVVTDR+SGYSKGFGFV+YAT EEA EGI GMDGKFLDGWVIFAEYA
Sbjct: 24 KFGQVVHARVVTDRVSGYSKGFGFVKYATQEEAAEGIAGMDGKFLDGWVIFAEYA 78
>gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 103 bits (258), Expect = 2e-20
Identities = 46/55 (83%), Positives = 54/55 (98%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFG+V++ARVVTDR+SGYSKGFGFV+YAT+EEA +GI+GMDGKFLDGWVIFAEYA
Sbjct: 66 KFGEVVHARVVTDRVSGYSKGFGFVKYATIEEASKGIQGMDGKFLDGWVIFAEYA 120
>ref|NP_001148723.1| ELAV-like protein 4 [Zea mays] gi|195621654|gb|ACG32657.1|
ELAV-like protein 4 [Zea mays]
Length = 127
Score = 103 bits (258), Expect = 2e-20
Identities = 47/55 (85%), Positives = 53/55 (96%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFGQVI ARV+TDRISGYS+GFGFV+YAT++EAGE I+GMDGKFLDGWVIFAEYA
Sbjct: 56 KFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIEGMDGKFLDGWVIFAEYA 110
>ref|XP_003540046.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Glycine max]
Length = 145
Score = 103 bits (257), Expect = 2e-20
Identities = 46/55 (83%), Positives = 54/55 (98%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFG+V++ARVVTDR+SGYSKGFGFV+YAT+EEA +GI+GMDGKFLDGWVIFAEYA
Sbjct: 71 KFGEVVHARVVTDRVSGYSKGFGFVQYATIEEAAKGIEGMDGKFLDGWVIFAEYA 125
>dbj|BAK04472.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 139
Score = 103 bits (257), Expect = 2e-20
Identities = 47/55 (85%), Positives = 52/55 (94%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFGQV +ARV+TDRISGYS+GFGFV+YAT+EEA EGIKGMDGKF DGWVIFAEYA
Sbjct: 62 KFGQVTDARVITDRISGYSRGFGFVKYATVEEAAEGIKGMDGKFFDGWVIFAEYA 116
>gb|EPS66753.1| hypothetical protein M569_08025, partial [Genlisea aurea]
Length = 151
Score = 102 bits (254), Expect = 5e-20
Identities = 46/55 (83%), Positives = 53/55 (96%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFG+V+NARVVTDR+SG+SKGFGFV+YATLE+A GIKGMDG+FLDGWVIFAEYA
Sbjct: 75 KFGEVVNARVVTDRVSGHSKGFGFVKYATLEDAESGIKGMDGQFLDGWVIFAEYA 129
>ref|XP_004505422.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cicer arietinum]
Length = 142
Score = 102 bits (254), Expect = 5e-20
Identities = 45/55 (81%), Positives = 54/55 (98%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFG+V++ARVVTDR+SGYSKGFGFV+YAT+E+A +GI+GMDGKFLDGWVIFAEYA
Sbjct: 68 KFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYA 122
>ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Glycine max]
Length = 145
Score = 102 bits (254), Expect = 5e-20
Identities = 45/55 (81%), Positives = 54/55 (98%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFG+V++ARVVTDR+SGYSKGFGFV+YAT+E+A +GI+GMDGKFLDGWVIFAEYA
Sbjct: 71 KFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYA 125
>gb|EOY12680.1| RNA-binding family protein [Theobroma cacao]
Length = 156
Score = 102 bits (253), Expect = 7e-20
Identities = 47/55 (85%), Positives = 53/55 (96%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
+FGQV++ARVVTDR+SGYSKGFGFVRYATLEEA +G +GMDGKFLDGWVIFAEYA
Sbjct: 78 QFGQVVDARVVTDRVSGYSKGFGFVRYATLEEAEKGREGMDGKFLDGWVIFAEYA 132
>gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 102 bits (253), Expect = 7e-20
Identities = 45/55 (81%), Positives = 54/55 (98%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFG+V++ARVVTDR+SGYSKGFGFV+YATLE+A +GI+GMDGKFL+GWVIFAEYA
Sbjct: 73 KFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLEGWVIFAEYA 127
>ref|XP_006370586.1| hypothetical protein POPTR_0001s44050g [Populus trichocarpa]
gi|550349792|gb|ERP67155.1| hypothetical protein
POPTR_0001s44050g [Populus trichocarpa]
Length = 137
Score = 101 bits (252), Expect = 9e-20
Identities = 46/55 (83%), Positives = 51/55 (92%)
Frame = -1
Query: 454 KFGQVINARVVTDRISGYSKGFGFVRYATLEEAGEGIKGMDGKFLDGWVIFAEYA 290
KFG+V+ A+VVTDR SGYSKGFGFVRY TLE+A EGIKGMDG+FLDGWVIFAEYA
Sbjct: 64 KFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAAEGIKGMDGQFLDGWVIFAEYA 118