BLASTX nr result
ID: Zingiber23_contig00011114
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00011114
(594 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003570061.1| PREDICTED: tRNA pseudouridine synthase A, mi... 296 4e-78
ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mi... 295 5e-78
gb|EMT13214.1| tRNA pseudouridine synthase A [Aegilops tauschii] 293 3e-77
gb|EMS53855.1| tRNA pseudouridine synthase A, mitochondrial [Tri... 291 7e-77
dbj|BAK04467.1| predicted protein [Hordeum vulgare subsp. vulgare] 291 9e-77
ref|XP_002454502.1| hypothetical protein SORBIDRAFT_04g032290 [S... 290 2e-76
gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays] 288 8e-76
gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tR... 288 8e-76
ref|NP_001150144.1| LOC100283773 [Zea mays] gi|195637102|gb|ACG3... 288 8e-76
ref|XP_006647660.1| PREDICTED: tRNA pseudouridine synthase A, mi... 286 3e-75
ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group] g... 286 4e-75
gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indi... 286 4e-75
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi... 282 4e-74
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum... 282 4e-74
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou... 280 2e-73
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi... 280 3e-73
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera] 280 3e-73
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ... 277 1e-72
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca... 277 2e-72
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK... 277 2e-72
>ref|XP_003570061.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Brachypodium distachyon]
Length = 553
Score = 296 bits (757), Expect = 4e-78
Identities = 142/178 (79%), Positives = 157/178 (88%)
Frame = +2
Query: 8 AASSAPGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDR 187
AA++ PG+PRRRYKRRKVAI L YCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR
Sbjct: 33 AAAADPGQPRRRYKRRKVAILLAYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADR 92
Query: 188 GLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTNSF 367
RRY+WAR+ARTDKGVSAAAQVVSGRFYVDPPGFV RLNA L QI FG+ RVTNSF
Sbjct: 93 AAPRRYEWARAARTDKGVSAAAQVVSGRFYVDPPGFVDRLNAQLAPQIRAFGYVRVTNSF 152
Query: 368 SAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTSM 541
SAKKFCDRRRYVYLLPV +LDPSAHPDRE+VMAS+GS N+L +C+ECSERGRK+P M
Sbjct: 153 SAKKFCDRRRYVYLLPVLALDPSAHPDREAVMASVGSGNQLAKCVECSERGRKVPDIM 210
>ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Setaria italica]
Length = 538
Score = 295 bits (756), Expect = 5e-78
Identities = 145/181 (80%), Positives = 159/181 (87%), Gaps = 1/181 (0%)
Frame = +2
Query: 2 EDAASSAPGEPRR-RYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPA 178
E + SA GEPRR RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP
Sbjct: 29 ESTSPSAAGEPRRPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPE 88
Query: 179 SDRGLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVT 358
+DR RRYDWAR+ARTDKGVSAAAQVVSGRFYVDPPGF+ RLNA L QI +G+ RVT
Sbjct: 89 ADRAAPRRYDWARAARTDKGVSAAAQVVSGRFYVDPPGFIDRLNAQLAPQIHAYGYVRVT 148
Query: 359 NSFSAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTS 538
NSFSAKKFCDRRRY+YLLPVF+LDPSAHPDRE+VMAS+GS +ELT+CLECSERGRK+P
Sbjct: 149 NSFSAKKFCDRRRYLYLLPVFALDPSAHPDREAVMASMGSGSELTKCLECSERGRKVPGV 208
Query: 539 M 541
M
Sbjct: 209 M 209
>gb|EMT13214.1| tRNA pseudouridine synthase A [Aegilops tauschii]
Length = 585
Score = 293 bits (749), Expect = 3e-77
Identities = 143/195 (73%), Positives = 162/195 (83%)
Frame = +2
Query: 8 AASSAPGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDR 187
AA + PG+PRRRYKRRKVAI L YCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR
Sbjct: 33 AAGADPGQPRRRYKRRKVAIILAYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADR 92
Query: 188 GLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTNSF 367
RY+WAR+ARTDKGVSAAAQVVSGRFYVDPPGF+ RLNA L QI FG+ RVTNSF
Sbjct: 93 AAPARYEWARAARTDKGVSAAAQVVSGRFYVDPPGFIDRLNAKLAPQIRAFGYVRVTNSF 152
Query: 368 SAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTSMDP 547
SAKKFCDRRRYVYLLPV +LDPSAHPDRE+V AS GS+N+L +C+ECSERGRK+P M
Sbjct: 153 SAKKFCDRRRYVYLLPVLALDPSAHPDREAVKASAGSENQLAKCVECSERGRKVPDIM-- 210
Query: 548 FSQGSKQEERPDSEQ 592
++ + PDSE+
Sbjct: 211 ----GREGKLPDSEE 221
>gb|EMS53855.1| tRNA pseudouridine synthase A, mitochondrial [Triticum urartu]
Length = 575
Score = 291 bits (746), Expect = 7e-77
Identities = 142/195 (72%), Positives = 162/195 (83%)
Frame = +2
Query: 8 AASSAPGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDR 187
AA + PG+PRRRYKRRKVAI L YCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR
Sbjct: 33 AAGADPGQPRRRYKRRKVAIILAYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADR 92
Query: 188 GLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTNSF 367
RY+WAR+ARTDKGVSAAAQVVSGRFYVDPPGF+ RLNA L QI FG+ RVTNSF
Sbjct: 93 AAPARYEWARAARTDKGVSAAAQVVSGRFYVDPPGFIDRLNAKLAPQIRAFGYVRVTNSF 152
Query: 368 SAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTSMDP 547
+AKKFCDRRRYVYLLPV +LDPSAHPDRE+V AS GS+N+L +C+ECSERGRK+P M
Sbjct: 153 NAKKFCDRRRYVYLLPVLALDPSAHPDREAVKASAGSENQLAKCVECSERGRKVPDIM-- 210
Query: 548 FSQGSKQEERPDSEQ 592
++ + PDSE+
Sbjct: 211 ----GREGKLPDSEE 221
>dbj|BAK04467.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 572
Score = 291 bits (745), Expect = 9e-77
Identities = 142/195 (72%), Positives = 161/195 (82%)
Frame = +2
Query: 8 AASSAPGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDR 187
A + PG+PRRRYKRRKVAI L YCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR
Sbjct: 33 AVGADPGQPRRRYKRRKVAIILAYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADR 92
Query: 188 GLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTNSF 367
RY+WAR+ARTDKGVSAAAQVVSGRFYVDPPGF+ RLNA L QI FG+ RVTNSF
Sbjct: 93 AAPARYEWARAARTDKGVSAAAQVVSGRFYVDPPGFIDRLNAKLAPQIRAFGYVRVTNSF 152
Query: 368 SAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTSMDP 547
SAKKFCDRRRYVYLLPV +LDPSAHPDRE+V AS GS+N+L +C+ECSERGRK+P M
Sbjct: 153 SAKKFCDRRRYVYLLPVLALDPSAHPDREAVKASAGSENQLAKCVECSERGRKVPDIM-- 210
Query: 548 FSQGSKQEERPDSEQ 592
++ + PDSE+
Sbjct: 211 ----GREGKLPDSEE 221
>ref|XP_002454502.1| hypothetical protein SORBIDRAFT_04g032290 [Sorghum bicolor]
gi|241934333|gb|EES07478.1| hypothetical protein
SORBIDRAFT_04g032290 [Sorghum bicolor]
Length = 567
Score = 290 bits (742), Expect = 2e-76
Identities = 140/178 (78%), Positives = 155/178 (87%)
Frame = +2
Query: 8 AASSAPGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDR 187
A + P + R RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR
Sbjct: 37 AEGADPAQRRPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADR 96
Query: 188 GLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTNSF 367
RRYDWAR+ARTDKGVSAAAQVVSGRFYVDPPGF+ RLNA L QI +G+ RVTNSF
Sbjct: 97 AAPRRYDWARAARTDKGVSAAAQVVSGRFYVDPPGFIDRLNAQLASQIRAYGYVRVTNSF 156
Query: 368 SAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTSM 541
SAKKFCDRRRY+YLLPVF+LDPSAHPDRE+VMAS+GS +ELT+CLECSERGRK+P M
Sbjct: 157 SAKKFCDRRRYLYLLPVFALDPSAHPDREAVMASMGSGSELTKCLECSERGRKVPGVM 214
>gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays]
Length = 565
Score = 288 bits (737), Expect = 8e-76
Identities = 139/173 (80%), Positives = 153/173 (88%)
Frame = +2
Query: 23 PGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRR 202
P + R RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR RR
Sbjct: 42 PAQRRPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRSAPRR 101
Query: 203 YDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTNSFSAKKF 382
YDWAR+ARTDKGVSAAAQVVSGRFYVDPPGF+ RLNA L QI +G+ RVTNSF+AKKF
Sbjct: 102 YDWARAARTDKGVSAAAQVVSGRFYVDPPGFIDRLNAQLAPQIRAYGYVRVTNSFNAKKF 161
Query: 383 CDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTSM 541
CDRRRY+YLLPVF+LDPSAHPDRE+VMAS+GS +ELT+CLECSERGRKIP M
Sbjct: 162 CDRRRYLYLLPVFALDPSAHPDREAVMASMGSGSELTKCLECSERGRKIPGVM 214
>gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tRNA pseudouridine
synthase family protein [Zea mays]
Length = 562
Score = 288 bits (737), Expect = 8e-76
Identities = 139/173 (80%), Positives = 153/173 (88%)
Frame = +2
Query: 23 PGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRR 202
P + R RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR RR
Sbjct: 42 PAQRRPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRSAPRR 101
Query: 203 YDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTNSFSAKKF 382
YDWAR+ARTDKGVSAAAQVVSGRFYVDPPGF+ RLNA L QI +G+ RVTNSF+AKKF
Sbjct: 102 YDWARAARTDKGVSAAAQVVSGRFYVDPPGFIDRLNAQLAPQIRAYGYVRVTNSFNAKKF 161
Query: 383 CDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTSM 541
CDRRRY+YLLPVF+LDPSAHPDRE+VMAS+GS +ELT+CLECSERGRKIP M
Sbjct: 162 CDRRRYLYLLPVFALDPSAHPDREAVMASMGSGSELTKCLECSERGRKIPGVM 214
>ref|NP_001150144.1| LOC100283773 [Zea mays] gi|195637102|gb|ACG38019.1| tRNA
pseudouridine synthase family protein [Zea mays]
Length = 561
Score = 288 bits (737), Expect = 8e-76
Identities = 139/173 (80%), Positives = 153/173 (88%)
Frame = +2
Query: 23 PGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRR 202
P + R RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +DR RR
Sbjct: 42 PAQRRPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRSAPRR 101
Query: 203 YDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTNSFSAKKF 382
YDWAR+ARTDKGVSAAAQVVSGRFYVDPPGF+ RLNA L QI +G+ RVTNSF+AKKF
Sbjct: 102 YDWARAARTDKGVSAAAQVVSGRFYVDPPGFIDRLNAQLAPQIRAYGYVRVTNSFNAKKF 161
Query: 383 CDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTSM 541
CDRRRY+YLLPVF+LDPSAHPDRE+VMAS+GS +ELT+CLECSERGRKIP M
Sbjct: 162 CDRRRYLYLLPVFALDPSAHPDREAVMASMGSGSELTKCLECSERGRKIPGVM 214
>ref|XP_006647660.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Oryza
brachyantha]
Length = 569
Score = 286 bits (732), Expect = 3e-75
Identities = 141/179 (78%), Positives = 156/179 (87%), Gaps = 1/179 (0%)
Frame = +2
Query: 8 AASSAPGEPRR-RYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASD 184
+A+ A G+PR RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +D
Sbjct: 32 SAADARGQPRAPRYKRRKVAIMLGYCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEAD 91
Query: 185 RGLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTNS 364
R RRYDWAR+ARTDKGVSAAAQVVSGRFYVDPP F RLNA L QI FG+ RVTNS
Sbjct: 92 RPAPRRYDWARAARTDKGVSAAAQVVSGRFYVDPPVFTDRLNAQLAPQIRAFGYVRVTNS 151
Query: 365 FSAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTSM 541
F+AKKFCDRRRYVYLLPVF+LDPSAHPDRE+VMAS+GS +ELT+C+ECSERGRK+P M
Sbjct: 152 FNAKKFCDRRRYVYLLPVFALDPSAHPDREAVMASVGSGSELTKCVECSERGRKVPGVM 210
>ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group]
gi|50251324|dbj|BAD28300.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|50252138|dbj|BAD28134.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|113537217|dbj|BAF09600.1| Os02g0668400 [Oryza sativa
Japonica Group]
Length = 581
Score = 286 bits (731), Expect = 4e-75
Identities = 147/202 (72%), Positives = 160/202 (79%), Gaps = 8/202 (3%)
Frame = +2
Query: 8 AASSAPGEPRR-RYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASD 184
AA + +PR RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +D
Sbjct: 33 AAGADGAQPRAPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYRAGAVPEAD 92
Query: 185 RGLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTNS 364
R RRYDWAR+ARTDKGVSAAAQVVSGRFYVDPP F RLNA L QI FG+ RVTNS
Sbjct: 93 RAAPRRYDWARAARTDKGVSAAAQVVSGRFYVDPPVFTDRLNAQLAPQIRAFGYVRVTNS 152
Query: 365 FSAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTSM- 541
F+AKKFCDRRRYVYLLPVF+LDPSAHPDRE+VMAS+GS +ELT+CLECSERGRK+P M
Sbjct: 153 FNAKKFCDRRRYVYLLPVFALDPSAHPDREAVMASVGSGSELTKCLECSERGRKVPGVMG 212
Query: 542 ------DPFSQGSKQEERPDSE 589
DP Q K E E
Sbjct: 213 REGKVPDPALQEEKSVEASREE 234
>gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indica Group]
Length = 581
Score = 286 bits (731), Expect = 4e-75
Identities = 147/202 (72%), Positives = 160/202 (79%), Gaps = 8/202 (3%)
Frame = +2
Query: 8 AASSAPGEPRR-RYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASD 184
AA + +PR RYKRRKVAI LGYCGAGYQGMQKNPGARTIEGDLEEAL+ A AVP +D
Sbjct: 33 AAGADGAQPRAPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYRAGAVPEAD 92
Query: 185 RGLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTNS 364
R RRYDWAR+ARTDKGVSAAAQVVSGRFYVDPP F RLNA L QI FG+ RVTNS
Sbjct: 93 RAAPRRYDWARAARTDKGVSAAAQVVSGRFYVDPPVFTDRLNAQLAPQIRAFGYVRVTNS 152
Query: 365 FSAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTSM- 541
F+AKKFCDRRRYVYLLPVF+LDPSAHPDRE+VMAS+GS +ELT+CLECSERGRK+P M
Sbjct: 153 FNAKKFCDRRRYVYLLPVFALDPSAHPDREAVMASVGSGSELTKCLECSERGRKVPGVMG 212
Query: 542 ------DPFSQGSKQEERPDSE 589
DP Q K E E
Sbjct: 213 REGKVPDPALQEEKSVEASREE 234
>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Cucumis sativus]
Length = 519
Score = 282 bits (722), Expect = 4e-74
Identities = 133/176 (75%), Positives = 152/176 (86%)
Frame = +2
Query: 2 EDAASSAPGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPAS 181
ED S++ ++RYKRRKVAIF YCG GYQGMQKNPGA+TIE DLEEAL+LA AVP
Sbjct: 38 EDVNSNSAAPKKQRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQ 97
Query: 182 DRGLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTN 361
DRGLS+RYDWARSARTDKGVSA QVVSGRFY+DPPGFV RLN++L QI +FG+KRVT
Sbjct: 98 DRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTA 157
Query: 362 SFSAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKI 529
SF+AKKFCDRRRYVYL+PVF+LDP+ H DRESV AS+GSDNEL +CLECSERGRK+
Sbjct: 158 SFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKV 213
>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp.
melo]
Length = 519
Score = 282 bits (722), Expect = 4e-74
Identities = 133/176 (75%), Positives = 152/176 (86%)
Frame = +2
Query: 2 EDAASSAPGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPAS 181
ED S++ ++RYKRRKVAIF YCG GYQGMQKNPGA+TIE DLEEAL+LA AVP
Sbjct: 38 EDVNSNSAAPKKQRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQ 97
Query: 182 DRGLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTN 361
DRGLS+RYDWARSARTDKGVSA QVVSGRFY+DPPGFV RLN++L QI +FG+KRVT
Sbjct: 98 DRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTA 157
Query: 362 SFSAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKI 529
SF+AKKFCDRRRYVYL+PVF+LDP+ H DRESV AS+GSDNEL +CLECSERGRK+
Sbjct: 158 SFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKV 213
>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 280 bits (717), Expect = 2e-73
Identities = 132/176 (75%), Positives = 151/176 (85%)
Frame = +2
Query: 2 EDAASSAPGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPAS 181
ED S++ ++RYKRRKVA F YCG GYQGMQKNPGA+TIE DLEEAL+LA AVP
Sbjct: 38 EDVNSNSAAPKKQRYKRRKVAXFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQ 97
Query: 182 DRGLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTN 361
DRGLS+RYDWARSARTDKGVSA QVVSGRFY+DPPGFV RLN++L QI +FG+KRVT
Sbjct: 98 DRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTA 157
Query: 362 SFSAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKI 529
SF+AKKFCDRRRYVYL+PVF+LDP+ H DRESV AS+GSDNEL +CLECSERGRK+
Sbjct: 158 SFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKV 213
>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
vinifera]
Length = 503
Score = 280 bits (715), Expect = 3e-73
Identities = 135/185 (72%), Positives = 155/185 (83%), Gaps = 2/185 (1%)
Frame = +2
Query: 41 RYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRRYDWARS 220
RYKRRK+AIF YCG GYQGMQKNPGA+TIEGDLEEALF + AVP DRG +R+DWARS
Sbjct: 35 RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFFSGAVPEQDRGHPKRFDWARS 94
Query: 221 ARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTNSFSAKKFCDRRRY 400
ARTDKGVSA QVVSGRFY+DPPG V RLN++LP QI +FGFKRVT SF+AKKFCDRRRY
Sbjct: 95 ARTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRY 154
Query: 401 VYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTSMDPFSQGSK--QEE 574
VYL+PVF+LDPS+HPDRESV+AS+GS+NEL +CLECSERGRK+ M S SK ++
Sbjct: 155 VYLIPVFALDPSSHPDRESVLASVGSENELVKCLECSERGRKVVGIMGKRSFESKVSVDD 214
Query: 575 RPDSE 589
R D E
Sbjct: 215 REDVE 219
>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
Length = 559
Score = 280 bits (715), Expect = 3e-73
Identities = 135/185 (72%), Positives = 155/185 (83%), Gaps = 2/185 (1%)
Frame = +2
Query: 41 RYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPASDRGLSRRYDWARS 220
RYKRRK+AIF YCG GYQGMQKNPGA+TIEGDLEEALF + AVP DRG +R+DWARS
Sbjct: 23 RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFFSGAVPEQDRGHPKRFDWARS 82
Query: 221 ARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTNSFSAKKFCDRRRY 400
ARTDKGVSA QVVSGRFY+DPPG V RLN++LP QI +FGFKRVT SF+AKKFCDRRRY
Sbjct: 83 ARTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRY 142
Query: 401 VYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKIPTSMDPFSQGSK--QEE 574
VYL+PVF+LDPS+HPDRESV+AS+GS+NEL +CLECSERGRK+ M S SK ++
Sbjct: 143 VYLIPVFALDPSSHPDRESVLASVGSENELVKCLECSERGRKVVGIMGKRSFESKVSVDD 202
Query: 575 RPDSE 589
R D E
Sbjct: 203 REDVE 207
>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 584
Score = 277 bits (709), Expect = 1e-72
Identities = 135/195 (69%), Positives = 160/195 (82%), Gaps = 5/195 (2%)
Frame = +2
Query: 2 EDAASSAPGEP-----RRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLAD 166
E+ A++APG+ ++RYKRRK+AIF YCG GYQGMQKNPGA+TIEGDLEEALF +
Sbjct: 32 EEIATTAPGDEAATVKKQRYKRRKMAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSG 91
Query: 167 AVPASDRGLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGF 346
AVP DRG +RYDWARSARTDKGVSA QV+SGRFYVDPPG V RLN+ LP QI +FG+
Sbjct: 92 AVPEQDRGCPKRYDWARSARTDKGVSAVGQVISGRFYVDPPGLVDRLNSILPSQIRIFGY 151
Query: 347 KRVTNSFSAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRK 526
KRVT SF+AKKFCDRRRYVYL+PVF+LDPS+H DRESV+AS+GS +EL +CLECSERGRK
Sbjct: 152 KRVTASFNAKKFCDRRRYVYLIPVFALDPSSHRDRESVLASLGSGDELVKCLECSERGRK 211
Query: 527 IPTSMDPFSQGSKQE 571
+ ++ S SK E
Sbjct: 212 VIGAVGKRSFESKSE 226
>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
[Medicago truncatula] gi|388510220|gb|AFK43176.1|
unknown [Medicago truncatula]
Length = 530
Score = 277 bits (708), Expect = 2e-72
Identities = 130/176 (73%), Positives = 153/176 (86%)
Frame = +2
Query: 2 EDAASSAPGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPAS 181
++ ++A G + RYKRRKVAIF YCG GYQGMQKNPGA+TIEG+LEEAL+++ AVP
Sbjct: 38 DEGCTTAEGS-KVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQ 96
Query: 182 DRGLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTN 361
DRGLS+RYDWARSARTDKGVSA QVVSGRFY+DPPGFV RLN++LP QI +FGFKRVT
Sbjct: 97 DRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTA 156
Query: 362 SFSAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKI 529
SFSAKKFCDRRRYVYL+PVF+LDP H DRE+V+AS+GS+NEL +CL CSERGRK+
Sbjct: 157 SFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELVKCLPCSERGRKV 212
>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
[Medicago truncatula]
Length = 530
Score = 277 bits (708), Expect = 2e-72
Identities = 130/176 (73%), Positives = 153/176 (86%)
Frame = +2
Query: 2 EDAASSAPGEPRRRYKRRKVAIFLGYCGAGYQGMQKNPGARTIEGDLEEALFLADAVPAS 181
++ ++A G + RYKRRKVAIF YCG GYQGMQKNPGA+TIEG+LEEAL+++ AVP
Sbjct: 38 DEGCTTAEGS-KVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQ 96
Query: 182 DRGLSRRYDWARSARTDKGVSAAAQVVSGRFYVDPPGFVARLNAHLPDQITVFGFKRVTN 361
DRGLS+RYDWARSARTDKGVSA QVVSGRFY+DPPGFV RLN++LP QI +FGFKRVT
Sbjct: 97 DRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTA 156
Query: 362 SFSAKKFCDRRRYVYLLPVFSLDPSAHPDRESVMASIGSDNELTRCLECSERGRKI 529
SFSAKKFCDRRRYVYL+PVF+LDP H DRE+V+AS+GS+NEL +CL CSERGRK+
Sbjct: 157 SFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELVKCLPCSERGRKV 212