BLASTX nr result
ID: Zingiber23_contig00011053
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber23_contig00011053 (889 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ94340.1| predicted protein [Hordeum vulgare subsp. vulgare] 56 2e-12 ref|XP_002322815.1| hypothetical protein POPTR_0016s07700g [Popu... 60 8e-07 >dbj|BAJ94340.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 142 Score = 55.8 bits (133), Expect(2) = 2e-12 Identities = 33/61 (54%), Positives = 37/61 (60%) Frame = -2 Query: 744 RLVSQNIRSCRLRAFALPGLRACAAQFFLGWLRELFSEFMFLPIFSDLLLFEILSMLFFF 565 RLVSQNIR CRLRAFALPGLRA AA FLG L + +PIF L + + F Sbjct: 8 RLVSQNIRRCRLRAFALPGLRANAANSFLGCL-----SLVNIPIFILFLFYFVEFHCIFL 62 Query: 564 C 562 C Sbjct: 63 C 63 Score = 43.5 bits (101), Expect(2) = 2e-12 Identities = 28/55 (50%), Positives = 34/55 (61%) Frame = -1 Query: 502 NIRSSRLRAFASPSLRANAA*ISFLGCLRRSI*FLVLSV*NIKLGFDLLLCYACL 338 NIRS RLRAFA P LRA+AA SFLGCL + LS + +D+ +C CL Sbjct: 76 NIRSCRLRAFALPGLRADAA-RSFLGCLMQCNSLNNLSF----VHYDIFICIICL 125 >ref|XP_002322815.1| hypothetical protein POPTR_0016s07700g [Populus trichocarpa] gi|222867445|gb|EEF04576.1| hypothetical protein POPTR_0016s07700g [Populus trichocarpa] Length = 63 Score = 60.5 bits (145), Expect = 8e-07 Identities = 30/50 (60%), Positives = 30/50 (60%), Gaps = 12/50 (24%) Frame = -1 Query: 136 MMTNSKACFSKHSQWPPK------------CFRLARLESLCCLILPWMSE 23 MM N KACFSKHSQWP K F A LESLCC ILPWMSE Sbjct: 1 MMINPKACFSKHSQWPSKLVSQNIRSGRLRAFAFAGLESLCCFILPWMSE 50