BLASTX nr result

ID: Zingiber23_contig00011053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00011053
         (889 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ94340.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   2e-12
ref|XP_002322815.1| hypothetical protein POPTR_0016s07700g [Popu...    60   8e-07

>dbj|BAJ94340.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 142

 Score = 55.8 bits (133), Expect(2) = 2e-12
 Identities = 33/61 (54%), Positives = 37/61 (60%)
 Frame = -2

Query: 744 RLVSQNIRSCRLRAFALPGLRACAAQFFLGWLRELFSEFMFLPIFSDLLLFEILSMLFFF 565
           RLVSQNIR CRLRAFALPGLRA AA  FLG L       + +PIF   L + +     F 
Sbjct: 8   RLVSQNIRRCRLRAFALPGLRANAANSFLGCL-----SLVNIPIFILFLFYFVEFHCIFL 62

Query: 564 C 562
           C
Sbjct: 63  C 63



 Score = 43.5 bits (101), Expect(2) = 2e-12
 Identities = 28/55 (50%), Positives = 34/55 (61%)
 Frame = -1

Query: 502 NIRSSRLRAFASPSLRANAA*ISFLGCLRRSI*FLVLSV*NIKLGFDLLLCYACL 338
           NIRS RLRAFA P LRA+AA  SFLGCL +      LS     + +D+ +C  CL
Sbjct: 76  NIRSCRLRAFALPGLRADAA-RSFLGCLMQCNSLNNLSF----VHYDIFICIICL 125


>ref|XP_002322815.1| hypothetical protein POPTR_0016s07700g [Populus trichocarpa]
           gi|222867445|gb|EEF04576.1| hypothetical protein
           POPTR_0016s07700g [Populus trichocarpa]
          Length = 63

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 30/50 (60%), Positives = 30/50 (60%), Gaps = 12/50 (24%)
 Frame = -1

Query: 136 MMTNSKACFSKHSQWPPK------------CFRLARLESLCCLILPWMSE 23
           MM N KACFSKHSQWP K             F  A LESLCC ILPWMSE
Sbjct: 1   MMINPKACFSKHSQWPSKLVSQNIRSGRLRAFAFAGLESLCCFILPWMSE 50


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