BLASTX nr result

ID: Zingiber23_contig00010613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00010613
         (426 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containin...    59   9e-07
emb|CBI27968.3| unnamed protein product [Vitis vinifera]               58   1e-06
ref|XP_003568774.1| PREDICTED: zinc finger CCCH domain-containin...    58   1e-06
gb|EEE62637.1| hypothetical protein OsJ_17440 [Oryza sativa Japo...    57   2e-06
gb|EAY96854.1| hypothetical protein OsI_18775 [Oryza sativa Indi...    57   2e-06
ref|NP_001054861.1| Os05g0195200 [Oryza sativa Japonica Group] g...    57   2e-06
ref|XP_006655069.1| PREDICTED: zinc finger CCCH domain-containin...    57   3e-06
gb|AFW80256.1| hypothetical protein ZEAMMB73_899917 [Zea mays]         56   6e-06
gb|AFW80253.1| hypothetical protein ZEAMMB73_899917 [Zea mays]         56   6e-06
gb|AFT82650.1| C3H47 C3H type transcription factor, partial [Zea...    56   6e-06
gb|ESW24939.1| hypothetical protein PHAVU_004G173600g [Phaseolus...    55   7e-06
emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]    55   1e-05

>ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Vitis vinifera]
          Length = 388

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
 Frame = -3

Query: 424 KSGFCSXXXXXXXXXXG--MGWLDAAEGTSFPKGEEPE-ERVESGRALRAKIFEKLSKEC 254
           + GFCS             +G++D  E       EEP  ERVESGR LRAK+FEKLSKE 
Sbjct: 312 RPGFCSLPSTPTRAPKRHGLGFVDLFE-------EEPAMERVESGRDLRAKMFEKLSKEN 364

Query: 253 VVERSVASLAPATPDVAWVSGLVK 182
            ++R   S + A PDV WVS LVK
Sbjct: 365 SLDRPDPSASGAGPDVGWVSELVK 388


>emb|CBI27968.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/81 (48%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = -3

Query: 421 SGFCSXXXXXXXXXXGMGWLDAAEGTSFPKGEEPE-ERVESGRALRAKIFEKLSKECVVE 245
           S +C           G+G++D  E       EEP  ERVESGR LRAK+FEKLSKE  ++
Sbjct: 248 SSWCVHMGSPAPKRHGLGFVDLFE-------EEPAMERVESGRDLRAKMFEKLSKENSLD 300

Query: 244 RSVASLAPATPDVAWVSGLVK 182
           R   S + A PDV WVS LVK
Sbjct: 301 RPDPSASGAGPDVGWVSELVK 321


>ref|XP_003568774.1| PREDICTED: zinc finger CCCH domain-containing protein 35-like
           [Brachypodium distachyon]
          Length = 384

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/50 (62%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
 Frame = -3

Query: 328 EEPEERVESGRALRAKIFEKLSKECVVERSVAS--LAPATPDVAWVSGLV 185
           E P ERVESGRALRAK+FE+LSKE  V        LA A PDV WVS L+
Sbjct: 334 EPPVERVESGRALRAKVFERLSKEATVCNDTMEDVLAAAAPDVGWVSDLI 383


>gb|EEE62637.1| hypothetical protein OsJ_17440 [Oryza sativa Japonica Group]
          Length = 379

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
 Frame = -3

Query: 328 EEPEERVESGRALRAKIFEKLSKECVVER-SVASLAPATPDVAWVSGLV 185
           E+P ERVESGRALR K+FE+LSKE  V   + A+ A   PDV WVS L+
Sbjct: 330 EQPMERVESGRALREKVFERLSKEATVSTDAAAAAAGVAPDVGWVSDLI 378


>gb|EAY96854.1| hypothetical protein OsI_18775 [Oryza sativa Indica Group]
          Length = 404

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
 Frame = -3

Query: 328 EEPEERVESGRALRAKIFEKLSKECVVER-SVASLAPATPDVAWVSGLV 185
           E+P ERVESGRALR K+FE+LSKE  V   + A+ A   PDV WVS L+
Sbjct: 355 EQPMERVESGRALREKVFERLSKEATVSTDAAAAAAGVAPDVGWVSDLI 403


>ref|NP_001054861.1| Os05g0195200 [Oryza sativa Japonica Group]
           gi|75261578|sp|Q6L4N4.1|C3H35_ORYSJ RecName: Full=Zinc
           finger CCCH domain-containing protein 35; Short=OsC3H35;
           AltName: Full=Protein DELAY OF THE ONSET OF
           SENESCENCE-like gi|47777438|gb|AAT38071.1| putative zinc
           finger transcription factor [Oryza sativa Japonica
           Group] gi|113578412|dbj|BAF16775.1| Os05g0195200 [Oryza
           sativa Japonica Group]
          Length = 402

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
 Frame = -3

Query: 328 EEPEERVESGRALRAKIFEKLSKECVVER-SVASLAPATPDVAWVSGLV 185
           E+P ERVESGRALR K+FE+LSKE  V   + A+ A   PDV WVS L+
Sbjct: 353 EQPMERVESGRALREKVFERLSKEATVSTDAAAAAAGVAPDVGWVSDLI 401


>ref|XP_006655069.1| PREDICTED: zinc finger CCCH domain-containing protein 35-like
           [Oryza brachyantha]
          Length = 270

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/52 (57%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
 Frame = -3

Query: 328 EEPEERVESGRALRAKIFEKLSKECVVERSVASLA----PATPDVAWVSGLV 185
           EEP ERVESGRALR K+FE+LSKE  V    A+ +     A PDV WVS L+
Sbjct: 218 EEPMERVESGRALREKVFERLSKEATVSTDAATTSQVATAAGPDVGWVSDLI 269


>gb|AFW80256.1| hypothetical protein ZEAMMB73_899917 [Zea mays]
          Length = 62

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/53 (58%), Positives = 36/53 (67%)
 Frame = -3

Query: 343 SFPKGEEPEERVESGRALRAKIFEKLSKECVVERSVASLAPATPDVAWVSGLV 185
           SF   EEP ERVESGRALRAK+FE+LS+E  V    A+     PDV WVS L+
Sbjct: 10  SFGGDEEPVERVESGRALRAKVFERLSREGAVSCYPAA-GTGGPDVGWVSDLI 61


>gb|AFW80253.1| hypothetical protein ZEAMMB73_899917 [Zea mays]
          Length = 296

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/53 (58%), Positives = 36/53 (67%)
 Frame = -3

Query: 343 SFPKGEEPEERVESGRALRAKIFEKLSKECVVERSVASLAPATPDVAWVSGLV 185
           SF   EEP ERVESGRALRAK+FE+LS+E  V    A+     PDV WVS L+
Sbjct: 244 SFGGDEEPVERVESGRALRAKVFERLSREGAVSCYPAA-GTGGPDVGWVSDLI 295


>gb|AFT82650.1| C3H47 C3H type transcription factor, partial [Zea mays subsp. mays]
           gi|413947605|gb|AFW80254.1| hypothetical protein
           ZEAMMB73_899917 [Zea mays] gi|413947606|gb|AFW80255.1|
           hypothetical protein ZEAMMB73_899917 [Zea mays]
          Length = 378

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/53 (58%), Positives = 36/53 (67%)
 Frame = -3

Query: 343 SFPKGEEPEERVESGRALRAKIFEKLSKECVVERSVASLAPATPDVAWVSGLV 185
           SF   EEP ERVESGRALRAK+FE+LS+E  V    A+     PDV WVS L+
Sbjct: 326 SFGGDEEPVERVESGRALRAKVFERLSREGAVSCYPAA-GTGGPDVGWVSDLI 377


>gb|ESW24939.1| hypothetical protein PHAVU_004G173600g [Phaseolus vulgaris]
          Length = 354

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 39/84 (46%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
 Frame = -3

Query: 424 KSGFCSXXXXXXXXXXGMG--WLDAAEGTSFPKGEEPE-ERVESGRALRAKIFEKLSKEC 254
           + GFCS            G  +LD  E +     EEP  ERVESGR +RAK+FEKLSKE 
Sbjct: 274 RPGFCSLPTTPTQQPARSGVNYLDIWEQSV---EEEPVMERVESGRGIRAKMFEKLSKEN 330

Query: 253 VVERSVASLAPATPDVAWVSGLVK 182
            +E S +      PDV WVS LVK
Sbjct: 331 SLEGSGSGHGSGAPDVEWVSELVK 354


>emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]
          Length = 460

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
 Frame = -3

Query: 424 KSGFCSXXXXXXXXXXG--MGWLDAAEGTSFPKGEEPE-ERVESGRALRAKIFEKLSKEC 254
           + GFCS             +G++D  E       EEP  ERVESGR LRAK+FEKLSKE 
Sbjct: 352 RPGFCSLPSTPTRAPKRHGLGFVDLFE-------EEPAMERVESGRDLRAKMFEKLSKEN 404

Query: 253 VVERSVASLAPATPDVAWVSGL 188
            ++R   S + A PDV WVS L
Sbjct: 405 SLDRPDPSASGAGPDVGWVSEL 426


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