BLASTX nr result

ID: Zingiber23_contig00010397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00010397
         (420 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS57733.1| hypothetical protein TRIUR3_16239 [Triticum urartu]     58   1e-06
gb|EMT14104.1| Phosphatidylinositol-glycan biosynthesis class X ...    55   7e-06
ref|XP_002303430.1| hypothetical protein POPTR_0003s09390g [Popu...    55   1e-05

>gb|EMS57733.1| hypothetical protein TRIUR3_16239 [Triticum urartu]
          Length = 214

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = +2

Query: 101 DLAGNNSPRFVGCWPCFWPYLASSFLQHGTTFESDFHGYLAQEFGISDTCKGLASNIGTL 280
           D   ++S ++V C PC   Y+A +++   T+  S+ H  L +    +D CKGLA  +   
Sbjct: 27  DKQADSSQQYVNCMPCSRTYIADAYVDALTSQLSE-HRELTEVRDTADLCKGLADELDVP 85

Query: 281 GILNLDRKLNGEGSHRHIISTLRFLNQAD-INSLVGTQECEAVIIER 418
            +  ++R+L GEGSHR +I +++F N  D +   +   +   VI+E+
Sbjct: 86  TLSEVNRQLVGEGSHRRLIYSIKFGNSKDAMVQFLDGYDANLVILEK 132


>gb|EMT14104.1| Phosphatidylinositol-glycan biosynthesis class X protein [Aegilops
           tauschii]
          Length = 215

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
 Frame = +2

Query: 101 DLAGNNSPRFVGCWPCFWPYLASSFLQHGTTFESDFHGYLAQEFGISDTCKGLASNIGTL 280
           D   +++ ++V C PC   Y+A ++    T+  S  H  L +    +D CKGLA  +   
Sbjct: 27  DKQAHSNQQYVNCMPCSRTYVADAYADALTSQLSQHHD-LTEVSDTTDLCKGLADELDVP 85

Query: 281 GILNLDRKLNGEGSHRHIISTLRFLNQAD-INSLVGTQECEAVIIER 418
            +  ++R+L GEGSHR +I +++F N  D +   +   +   VIIE+
Sbjct: 86  TLSEVNRQLVGEGSHRRLIYSVKFGNFKDAMIQFLDGYDANLVIIEK 132


>ref|XP_002303430.1| hypothetical protein POPTR_0003s09390g [Populus trichocarpa]
           gi|118488795|gb|ABK96208.1| unknown [Populus
           trichocarpa] gi|222840862|gb|EEE78409.1| hypothetical
           protein POPTR_0003s09390g [Populus trichocarpa]
          Length = 315

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
 Frame = +2

Query: 77  ANSYNENVDLAGNNSPRFVGCWPCFWPYLASSFLQ-HGTTFESDFHGYLAQEFGISDTCK 253
           ++S     + + N++  + G    F  Y+  S+ + + +  E +F  ++  E  + +TCK
Sbjct: 33  SSSEETRCESSSNSNNSYCG----FRKYIMESYFEKYDSLLEPNFQNFIVDEL-LFNTCK 87

Query: 254 GLASNIGTLGILNLD-RKLNGEGSHRHIISTLRFLNQADINSLVGTQECEAVIIER 418
            L  N+  L  +++  R L GEGSHRHI ST+RF  Q D  S +    C+ +IIER
Sbjct: 88  LLPDNLNHLLRVSVPWRHLIGEGSHRHISSTIRFHMQPDSMSQLRAHFCKVIIIER 143


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