BLASTX nr result

ID: Zingiber23_contig00010119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00010119
         (383 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001268172.1| zinc finger protein-like [Vitis vinifera] gi...    80   3e-13
ref|XP_001767808.1| predicted protein [Physcomitrella patens] gi...    76   5e-12
ref|XP_001759720.1| predicted protein [Physcomitrella patens] gi...    74   3e-11
ref|XP_001756411.1| predicted protein [Physcomitrella patens] gi...    70   3e-10
ref|XP_001783430.1| predicted protein [Physcomitrella patens] gi...    67   3e-09
ref|XP_004242261.1| PREDICTED: uncharacterized protein LOC101262...    66   6e-09
ref|XP_004972714.1| PREDICTED: zinc finger protein HD1-like [Set...    65   9e-09
ref|XP_002445155.1| hypothetical protein SORBIDRAFT_07g004973 [S...    65   9e-09
ref|XP_003571406.1| PREDICTED: uncharacterized protein LOC100830...    65   1e-08
ref|XP_002316440.1| zinc finger family protein [Populus trichoca...    65   1e-08
gb|ADL36668.1| COL domain class transcription factor [Malus dome...    64   2e-08
ref|NP_001169514.1| uncharacterized LOC100383388 [Zea mays] gi|2...    64   2e-08
gb|ADL36665.1| COL domain class transcription factor [Malus dome...    64   3e-08
gb|ABK96678.1| unknown [Populus trichocarpa x Populus deltoides]       61   1e-07
gb|ESW04595.1| hypothetical protein PHAVU_011G108800g [Phaseolus...    61   2e-07
ref|XP_002311907.2| zinc finger family protein [Populus trichoca...    61   2e-07
ref|XP_006427763.1| hypothetical protein CICLE_v10026364mg [Citr...    60   2e-07
ref|XP_006279498.1| hypothetical protein CARUB_v10027109mg [Caps...    60   2e-07
ref|XP_002994205.1| hypothetical protein SELMODRAFT_449329 [Sela...    60   2e-07
ref|XP_002885422.1| hypothetical protein ARALYDRAFT_342260 [Arab...    60   2e-07

>ref|NP_001268172.1| zinc finger protein-like [Vitis vinifera]
           gi|307707121|gb|ADN87331.1| zinc finger protein-like
           protein [Vitis vinifera]
          Length = 260

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 47/103 (45%), Positives = 52/103 (50%)
 Frame = -2

Query: 337 VCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAG 158
           VCELC            A LCWSCDA VHGANFLVARH+R   C+ C  L  D  F G G
Sbjct: 5   VCELCNEEASLYCGSDSAFLCWSCDARVHGANFLVARHVRHTLCSECNGLAGDTFF-GVG 63

Query: 157 SPAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAESA 29
              P R +C SC               D +S + SCVST ESA
Sbjct: 64  F-QPHRLICRSC---SSEVESETSTDHDSKSSSSSCVSTTESA 102


>ref|XP_001767808.1| predicted protein [Physcomitrella patens]
           gi|162680890|gb|EDQ67322.1| predicted protein
           [Physcomitrella patens]
          Length = 374

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 37/71 (52%), Positives = 41/71 (57%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELC G          AH+CWSCDA VHGANFLVARH R V C  CG +   R   GA +
Sbjct: 8   CELCDGAAALYCAADNAHICWSCDAKVHGANFLVARHTRSVLCKTCG-ISTTRRTTGA-N 65

Query: 154 PAPIRSLCGSC 122
           P P+  LC  C
Sbjct: 66  PTPLTGLCSGC 76


>ref|XP_001759720.1| predicted protein [Physcomitrella patens]
           gi|162689259|gb|EDQ75632.1| predicted protein
           [Physcomitrella patens]
          Length = 554

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/72 (48%), Positives = 40/72 (55%)
 Frame = -2

Query: 337 VCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAG 158
           VCELC G          AH+CW+CDA VH ANFLVARH R V C  CG     +  A  G
Sbjct: 7   VCELCDGVADLYCAADEAHICWTCDAKVHSANFLVARHTRLVLCEICGIQTPWK--ASGG 64

Query: 157 SPAPIRSLCGSC 122
           +P P+  LC  C
Sbjct: 65  NPTPLTGLCAEC 76


>ref|XP_001756411.1| predicted protein [Physcomitrella patens]
           gi|162692450|gb|EDQ78807.1| predicted protein
           [Physcomitrella patens]
          Length = 593

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 33/71 (46%), Positives = 37/71 (52%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELC G          AH+CW CDA VH ANFLVARH R V C  CG     R  A   +
Sbjct: 224 CELCDGVAALYCEADEAHICWICDAKVHSANFLVARHTRSVLCGTCGTQTSWR--ASGAN 281

Query: 154 PAPIRSLCGSC 122
           P P+  +C  C
Sbjct: 282 PTPLPGVCAEC 292


>ref|XP_001783430.1| predicted protein [Physcomitrella patens]
           gi|162665073|gb|EDQ51770.1| predicted protein
           [Physcomitrella patens]
          Length = 412

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/71 (43%), Positives = 37/71 (52%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELC            A++CW+CDA VHGANFLVARH R V C  CG     R+     +
Sbjct: 8   CELCDSVACLYCSADEAYICWTCDAKVHGANFLVARHTRSVLCGTCGISTPWRI--SGAN 65

Query: 154 PAPIRSLCGSC 122
           P P+   C  C
Sbjct: 66  PTPLTGFCTDC 76


>ref|XP_004242261.1| PREDICTED: uncharacterized protein LOC101262021 [Solanum
           lycopersicum]
          Length = 261

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 38/103 (36%), Positives = 49/103 (47%)
 Frame = -2

Query: 337 VCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAG 158
           +CELC            A LC+ CDA VH ANFLVARHLR   C+ C +L   R F+   
Sbjct: 8   LCELCNDQAALFCPSDSAFLCFHCDAKVHQANFLVARHLRLTLCSHCNSLTKKR-FSPCS 66

Query: 157 SPAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAESA 29
            P P  +LC SC                  S + +CVS+ +S+
Sbjct: 67  PPPP--ALCPSCSRNSSGDSDLRSVSTTSSSSSSTCVSSTQSS 107


>ref|XP_004972714.1| PREDICTED: zinc finger protein HD1-like [Setaria italica]
          Length = 260

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 34/71 (47%), Positives = 35/71 (49%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELCG           A LCW CDA VHGANFLVARH R + C GC      R  A    
Sbjct: 19  CELCGAAARVYCCADEATLCWGCDAQVHGANFLVARHARTLLCRGCARPTPWR--AAGPR 76

Query: 154 PAPIRSLCGSC 122
             P  SLC  C
Sbjct: 77  LGPTASLCDRC 87


>ref|XP_002445155.1| hypothetical protein SORBIDRAFT_07g004973 [Sorghum bicolor]
           gi|241941505|gb|EES14650.1| hypothetical protein
           SORBIDRAFT_07g004973 [Sorghum bicolor]
          Length = 271

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 34/71 (47%), Positives = 35/71 (49%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELCG           A LCW CDA VHGANFLVARH R + C GC      R  A    
Sbjct: 24  CELCGAAARVYCGADEATLCWGCDAQVHGANFLVARHARALLCRGCARPTPWR--AAGPR 81

Query: 154 PAPIRSLCGSC 122
             P  SLC  C
Sbjct: 82  LGPTASLCDRC 92


>ref|XP_003571406.1| PREDICTED: uncharacterized protein LOC100830331 [Brachypodium
           distachyon]
          Length = 229

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/71 (47%), Positives = 35/71 (49%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELCG           A LCW CDA VHGANFLVARH R + C GC      R  A    
Sbjct: 18  CELCGAAARVYCCADDATLCWGCDAQVHGANFLVARHARALLCRGCARPTPWR--AAGPR 75

Query: 154 PAPIRSLCGSC 122
             P  SLC  C
Sbjct: 76  LGPTASLCERC 86


>ref|XP_002316440.1| zinc finger family protein [Populus trichocarpa]
           gi|222865480|gb|EEF02611.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 249

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 39/105 (37%), Positives = 58/105 (55%)
 Frame = -2

Query: 337 VCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAG 158
           VCELC            A+LC+ CD++VH ANFLVARH R+V C+GCG++  +  F+G  
Sbjct: 5   VCELCRREAGVYCDSDAAYLCFDCDSNVHNANFLVARHARRVICSGCGSITGNP-FSG-H 62

Query: 157 SPAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAESATA 23
           +P+  R  C SC               ++E D+ SC S++  ++A
Sbjct: 63  TPSLSRVTCCSC------------SPGNKELDSISCSSSSTLSSA 95


>gb|ADL36668.1| COL domain class transcription factor [Malus domestica]
          Length = 271

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/103 (35%), Positives = 45/103 (43%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELC            A LC  CDA VH ANFLVARHLRQ  C+ C ++   R       
Sbjct: 8   CELCDQEASFYCPSDSAFLCSRCDARVHQANFLVARHLRQPLCSNCKSVAGTR------- 60

Query: 154 PAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAESAT 26
              + SLC SC              +   SD  +C+S+ E  T
Sbjct: 61  --DLHSLCSSCSPEFFSGDCDGDAKSSSSSDCSACISSTEMGT 101


>ref|NP_001169514.1| uncharacterized LOC100383388 [Zea mays] gi|224029811|gb|ACN33981.1|
           unknown [Zea mays] gi|413921174|gb|AFW61106.1| putative
           B-box type zinc finger family protein [Zea mays]
          Length = 263

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/71 (47%), Positives = 35/71 (49%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELCG           A LCW CDA VHGANFLVARH R + C GC      R  A    
Sbjct: 28  CELCGAAARVYCGADEATLCWGCDAQVHGANFLVARHARSLLCRGCARPTPWR--AAGPR 85

Query: 154 PAPIRSLCGSC 122
             P  SLC  C
Sbjct: 86  LGPTVSLCVRC 96


>gb|ADL36665.1| COL domain class transcription factor [Malus domestica]
          Length = 186

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELCG           A LCW CD  +HGANFLVA+H R + C GC +L     + G+GS
Sbjct: 4   CELCGVRARVHCEADQARLCWDCDGKIHGANFLVAKHPRSLLCHGCQSLTP---WTGSGS 60

Query: 154 P-APIRSLCGSC 122
              P  S+C +C
Sbjct: 61  KLTPTVSVCETC 72


>gb|ABK96678.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 220

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/72 (45%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELCGG          A LCW CD  VH ANFLVA+H R + C  C        +  +GS
Sbjct: 4   CELCGGSARMFCESDQASLCWDCDEKVHSANFLVAKHCRTLLCQVC---QSPTPWKSSGS 60

Query: 154 P-APIRSLCGSC 122
             API S+C SC
Sbjct: 61  KLAPIVSVCESC 72


>gb|ESW04595.1| hypothetical protein PHAVU_011G108800g [Phaseolus vulgaris]
          Length = 184

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/93 (38%), Positives = 40/93 (43%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELC            A LCW CDA VHGANFLVARH R + C  C +    +  A    
Sbjct: 4   CELCKLPARIFCESDQASLCWDCDAKVHGANFLVARHSRTLLCRTCHSSTPWK--ASGAR 61

Query: 154 PAPIRSLCGSCXXXXXXXXXXXXXXADEESDTE 56
            A   S+C  C               DEE DTE
Sbjct: 62  LANAASICNRCAASTAEEQDETESGNDEEPDTE 94


>ref|XP_002311907.2| zinc finger family protein [Populus trichocarpa]
           gi|550332086|gb|EEE89274.2| zinc finger family protein
           [Populus trichocarpa]
          Length = 250

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/102 (34%), Positives = 52/102 (50%)
 Frame = -2

Query: 337 VCELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAG 158
           VCELC            A LC+ CD++VH ANF+V+RHLR+V C+ C +L     F+G  
Sbjct: 5   VCELCQREAGLYCDSDAAFLCFECDSNVHNANFVVSRHLRRVICSACNSLTGGS-FSGT- 62

Query: 157 SPAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAES 32
           +P+  R  C SC              +   + + +C+ST E+
Sbjct: 63  APSLRRVTCLSCSPENKELDSISCSSSCSSTLSSACISTTET 104


>ref|XP_006427763.1| hypothetical protein CICLE_v10026364mg [Citrus clementina]
           gi|557529753|gb|ESR41003.1| hypothetical protein
           CICLE_v10026364mg [Citrus clementina]
          Length = 243

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELC            A LC+ CD  VH ANFLVARH+RQ  C+ C +L   +  +G  S
Sbjct: 5   CELCSQEAALHCASDEAFLCFDCDDRVHKANFLVARHVRQTLCSQCKSL-TGKFISGERS 63

Query: 154 PAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAESATA---GRRR 11
            + +  +C SC              +   S +  C+S+ ES+ A   GR R
Sbjct: 64  SSSLVPICPSC-------------CSSTTSTSSDCISSTESSAAEKMGRER 101


>ref|XP_006279498.1| hypothetical protein CARUB_v10027109mg [Capsella rubella]
           gi|482548202|gb|EOA12396.1| hypothetical protein
           CARUB_v10027109mg [Capsella rubella]
          Length = 217

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/71 (43%), Positives = 37/71 (52%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELC G          A LCW CD  VHGANFLVA+H R + C+ C +L   +  A    
Sbjct: 6   CELCNGVARMYCESDDASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWK--ASGLR 63

Query: 154 PAPIRSLCGSC 122
             P  S+C SC
Sbjct: 64  LRPTVSICESC 74


>ref|XP_002994205.1| hypothetical protein SELMODRAFT_449329 [Selaginella moellendorffii]
           gi|300137916|gb|EFJ04710.1| hypothetical protein
           SELMODRAFT_449329 [Selaginella moellendorffii]
          Length = 263

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELC            A+LCW CD+ VHGANF+VARHLR + C  C +     + A +  
Sbjct: 7   CELCQVRAAVYCCADEAYLCWKCDSKVHGANFIVARHLRSILCGRCHS--PTAVLAESSP 64

Query: 154 PAPIRS-LCGSC 122
           P P  S LC +C
Sbjct: 65  PGPCSSPLCPTC 76


>ref|XP_002885422.1| hypothetical protein ARALYDRAFT_342260 [Arabidopsis lyrata subsp.
           lyrata] gi|297331262|gb|EFH61681.1| hypothetical protein
           ARALYDRAFT_342260 [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 42/119 (35%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
 Frame = -2

Query: 334 CELCGGXXXXXXXXXXAHLCWSCDAHVHGANFLVARHLRQVACTGCGALDDDRLFAGAGS 155
           CELCG           A LC SCDA  HG+NFL ARH R+V C  C +L  D   +G   
Sbjct: 198 CELCGAEADIHCAADSAFLCRSCDAKFHGSNFLFARHFRRVICPNCKSLTQD-FVSGPLL 256

Query: 154 PAPIRSLCGSCXXXXXXXXXXXXXXADEESDTESCVSTAE--------SATAGRRRAIG 2
           P P R+ C S                +  S + SC S+ +        S T G  RA G
Sbjct: 257 PWPPRTTCCS----------------ESSSSSSSCCSSLDCVSSSELSSTTRGVNRARG 299


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