BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00008453
         (1093 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563135.1| PREDICTED: DNA-directed RNA polymerase III s...   218   3e-54
ref|NP_001059628.1| Os07g0477000 [Oryza sativa Japonica Group] g...   217   6e-54
gb|EEE67155.1| hypothetical protein OsJ_24224 [Oryza sativa Japo...   217   6e-54
ref|XP_006657688.1| PREDICTED: DNA-directed RNA polymerase III s...   216   1e-53
dbj|BAK08181.1| predicted protein [Hordeum vulgare subsp. vulgare]    215   2e-53
gb|EOX94571.1| RNA polymerase Rpb7 N-terminal domain-containing ...   210   7e-52
ref|XP_003580811.1| PREDICTED: DNA-directed RNA polymerase III s...   210   7e-52
ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III s...   209   2e-51
gb|EMT04694.1| DNA-directed RNA polymerase III subunit RPC8 [Aeg...   208   3e-51
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...   208   3e-51
tpg|DAA62512.1| TPA: DNA-directed RNA polymerase III subunit pol...   207   5e-51
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...   207   5e-51
gb|EMS46002.1| DNA-directed RNA polymerase III subunit RPC8 [Tri...   207   6e-51
ref|XP_002988954.1| hypothetical protein SELMODRAFT_128885 [Sela...   205   2e-50
gb|ACR34942.1| unknown [Zea mays]                                     203   9e-50
ref|XP_002460684.1| hypothetical protein SORBIDRAFT_02g033110 [S...   202   1e-49
ref|XP_004957678.1| PREDICTED: DNA-directed RNA polymerase III s...   202   2e-49
ref|NP_001147612.1| DNA-directed RNA polymerase III subunit 22.9...   201   3e-49
gb|EMT18324.1| DNA-directed RNA polymerase III subunit RPC8 [Aeg...   201   4e-49
gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Mor...   199   1e-48

>ref|XP_003563135.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Brachypodium distachyon]
          Length = 200

 Score =  218 bits (556), Expect = 3e-54
 Identities = 112/188 (59%), Positives = 136/188 (72%), Gaps = 1/188 (0%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MF LS IE             LVDAIK ELERL+LDKVITNLGLC+SVYDI ++EGGFI+
Sbjct: 1   MFVLSQIEHNLPMPPHLLSRPLVDAIKTELERLFLDKVITNLGLCVSVYDILAVEGGFIF 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PGEG STYKV FRLL+FRPFIGEV+  K+   D  GL ++L FFSDI +P HL+   +  
Sbjct: 61  PGEGCSTYKVSFRLLMFRPFIGEVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQYGTVR 120

Query: 461 GEDGIWVWKHEFGD-LAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDG 285
           GEDG W+ K + GD L +D+D+E+   V+ I YP IPVEQ  + +PFAPMQIIG I GDG
Sbjct: 121 GEDGRWMLKTDDGDELYLDIDDEIRFLVSGIKYPPIPVEQKEDDKPFAPMQIIGSIKGDG 180

Query: 284 LGLISWWA 261
           LGL++WWA
Sbjct: 181 LGLLAWWA 188


>ref|NP_001059628.1| Os07g0477000 [Oryza sativa Japonica Group]
           gi|29837202|dbj|BAC75582.1| putative DNA-directed RNA
           polymerase III subunit 22.9 kDa polypeptide [Oryza
           sativa Japonica Group] gi|113611164|dbj|BAF21542.1|
           Os07g0477000 [Oryza sativa Japonica Group]
           gi|215765537|dbj|BAG87234.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218199590|gb|EEC82017.1| hypothetical protein
           OsI_25976 [Oryza sativa Indica Group]
          Length = 202

 Score =  217 bits (553), Expect = 6e-54
 Identities = 111/188 (59%), Positives = 133/188 (70%), Gaps = 1/188 (0%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MF LS IE             LVDAIK ELERL+LDKV+ NLGLC+SVYDIRS+EGGFI+
Sbjct: 1   MFVLSQIEHNLPMPPHLLSRPLVDAIKAELERLFLDKVVANLGLCVSVYDIRSVEGGFIF 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PGEG STYKV FRLL+FRPF+GEV+  K+   D  GLH++L FFSDI +P HL+   +  
Sbjct: 61  PGEGCSTYKVSFRLLMFRPFVGEVLVGKISGYDEKGLHVSLDFFSDISIPGHLMQYGTAR 120

Query: 461 GEDGIWVWKHEFGD-LAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDG 285
             DG W+ K E GD L +DLD+E+   V+ I YP IPVEQ    + FAPMQIIG I GDG
Sbjct: 121 ALDGRWMLKTEDGDELYLDLDDEIRFLVSSIKYPPIPVEQKETDRAFAPMQIIGSIKGDG 180

Query: 284 LGLISWWA 261
           LGL++WWA
Sbjct: 181 LGLLAWWA 188


>gb|EEE67155.1| hypothetical protein OsJ_24224 [Oryza sativa Japonica Group]
          Length = 365

 Score =  217 bits (553), Expect = 6e-54
 Identities = 111/188 (59%), Positives = 133/188 (70%), Gaps = 1/188 (0%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MF LS IE             LVDAIK ELERL+LDKV+ NLGLC+SVYDIRS+EGGFI+
Sbjct: 164 MFVLSQIEHNLPMPPHLLSRPLVDAIKAELERLFLDKVVANLGLCVSVYDIRSVEGGFIF 223

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PGEG STYKV FRLL+FRPF+GEV+  K+   D  GLH++L FFSDI +P HL+   +  
Sbjct: 224 PGEGCSTYKVSFRLLMFRPFVGEVLVGKISGYDEKGLHVSLDFFSDISIPGHLMQYGTAR 283

Query: 461 GEDGIWVWKHEFGD-LAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDG 285
             DG W+ K E GD L +DLD+E+   V+ I YP IPVEQ    + FAPMQIIG I GDG
Sbjct: 284 ALDGRWMLKTEDGDELYLDLDDEIRFLVSSIKYPPIPVEQKETDRAFAPMQIIGSIKGDG 343

Query: 284 LGLISWWA 261
           LGL++WWA
Sbjct: 344 LGLLAWWA 351


>ref|XP_006657688.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Oryza
           brachyantha]
          Length = 200

 Score =  216 bits (551), Expect = 1e-53
 Identities = 109/187 (58%), Positives = 131/187 (70%), Gaps = 1/187 (0%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MF LS IE             LVDAIK ELERL+LDK++ NLGLC+SVYDIRS+EGGFI+
Sbjct: 1   MFVLSQIEHNLPMPPHVLSRPLVDAIKAELERLFLDKIVANLGLCVSVYDIRSVEGGFIF 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PGEG STYKV FRLL+FRPF+GEV+  K+   D  GLH++L FFSDI +P HL+   +  
Sbjct: 61  PGEGCSTYKVSFRLLMFRPFVGEVLVGKISGYDEKGLHVSLDFFSDICIPGHLMQYGTAR 120

Query: 461 GEDGIWVWKHEFGD-LAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDG 285
             DG W+ K E GD L +D D+E+   V+ I YP IPVEQ     PFAPMQIIG I GDG
Sbjct: 121 ASDGRWMLKTEDGDELYLDTDDEIRFLVSSIKYPPIPVEQKETDSPFAPMQIIGSIKGDG 180

Query: 284 LGLISWW 264
           LGL++WW
Sbjct: 181 LGLLAWW 187


>dbj|BAK08181.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 210

 Score =  215 bits (548), Expect = 2e-53
 Identities = 110/188 (58%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MF LS IE             LVDAIK ELERL+LDKV+ NLGLC+SVYDIR +EGGFI+
Sbjct: 1   MFVLSQIEHNLPMPPHLLNRPLVDAIKSELERLFLDKVVANLGLCVSVYDIRKVEGGFIF 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PGEG STY V FRLL+FRPFIGEV+  K+   D  GL ++L FFSDI +P HL+   +  
Sbjct: 61  PGEGCSTYTVSFRLLMFRPFIGEVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQFGTVR 120

Query: 461 GEDGIWVWKHEFGD-LAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDG 285
           GEDG W  K E GD L +D+D+E+   V+ I YP IPVEQ  + +PFAPMQI G I GDG
Sbjct: 121 GEDGRWALKTEDGDELPLDIDDEIRFLVSSIKYPPIPVEQKEDDRPFAPMQINGSIKGDG 180

Query: 284 LGLISWWA 261
           LGL++WWA
Sbjct: 181 LGLLAWWA 188


>gb|EOX94571.1| RNA polymerase Rpb7 N-terminal domain-containing protein [Theobroma
           cacao]
          Length = 210

 Score =  210 bits (535), Expect = 7e-52
 Identities = 111/204 (54%), Positives = 137/204 (67%), Gaps = 16/204 (7%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MFYLSLIE             L +AIK ELE L+LDKVI NLGLCISVYDIRS++GGFIY
Sbjct: 1   MFYLSLIEHTLRLPPHLLNLPLDEAIKIELEALFLDKVIANLGLCISVYDIRSIKGGFIY 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PG+G+STY V FRL++FRPF+GE+I AKLK SDA GL L+LGFF DI++PVHLLP  S  
Sbjct: 61  PGDGASTYTVEFRLIVFRPFVGEIIVAKLKESDANGLRLSLGFFDDIYIPVHLLPIPSRF 120

Query: 461 GED------GIWVWKHEFGD----------LAMDLDEEVNVRVTKINYPSIPVEQDANAQ 330
             D      G W+W  +FG+            +D  +++  RV  + YPSIP+EQ  N++
Sbjct: 121 ESDPNNRNQGRWIW--DFGEAEEAQSEEPRFVIDGMDQIKFRVHSVIYPSIPLEQPENSK 178

Query: 329 PFAPMQIIGEIYGDGLGLISWWAD 258
           PFAPM I G I  DGLG +SWW +
Sbjct: 179 PFAPMVITGSIDYDGLGPVSWWEE 202


>ref|XP_003580811.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Brachypodium distachyon]
          Length = 200

 Score =  210 bits (535), Expect = 7e-52
 Identities = 110/188 (58%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MF LS IE             LVDAIK ELERL+LDKVI NLGLC+SVYDI ++EGGFI+
Sbjct: 1   MFVLSQIEHNLPMPPHLLSRPLVDAIKTELERLFLDKVIANLGLCVSVYDILAVEGGFIF 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PGEG STYKV FRLL+FRPFIGEV+  K+   D  GL ++L F SDI +P HL+   +  
Sbjct: 61  PGEGCSTYKVSFRLLMFRPFIGEVLVGKISGYDEKGLQVSLDFSSDICIPGHLMQYGTVR 120

Query: 461 GEDGIWVWKHEFGD-LAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDG 285
           GEDG W+ K E  D L +DLD+E+   V  I YP IPVEQ  + +PFAPMQI G I GDG
Sbjct: 121 GEDGRWMLKTEDDDELYLDLDDEIRFLVASIKYPPIPVEQKEDDKPFAPMQINGSIKGDG 180

Query: 284 LGLISWWA 261
           LGL++WWA
Sbjct: 181 LGLLAWWA 188


>ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           isoform X1 [Citrus sinensis]
           gi|568851835|ref|XP_006479591.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC8-like isoform X2 [Citrus
           sinensis]
          Length = 192

 Score =  209 bits (531), Expect = 2e-51
 Identities = 108/194 (55%), Positives = 132/194 (68%), Gaps = 8/194 (4%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MFYLS IE             L +AIK ELE ++LDKVI NLGLCIS+YDI+ +EGGF+Y
Sbjct: 1   MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKVIANLGLCISIYDIKEIEGGFVY 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PGEG+ST+ V FRL++FRPF+GE+I AKLK SDA GL L+LGFF DI+VP HLLP  S  
Sbjct: 61  PGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFFEDIYVPSHLLPSPSRS 120

Query: 461 GEDGI------WVWKHEFGDLAMDLD--EEVNVRVTKINYPSIPVEQDANAQPFAPMQII 306
             D        W+W  EFGD    +D  +E+  RV  +NYPSIP+EQ   ++PFAPM I 
Sbjct: 121 EPDPYGRYEVKWIW--EFGDTKYVIDGLDEIKFRVLSVNYPSIPIEQAEGSKPFAPMVIN 178

Query: 305 GEIYGDGLGLISWW 264
           G I  DGLG +SWW
Sbjct: 179 GSIDYDGLGPVSWW 192


>gb|EMT04694.1| DNA-directed RNA polymerase III subunit RPC8 [Aegilops tauschii]
          Length = 271

 Score =  208 bits (530), Expect = 3e-51
 Identities = 104/166 (62%), Positives = 124/166 (74%), Gaps = 1/166 (0%)
 Frame = -3

Query: 755 VDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIYPGEGSSTYKVVFRLLIFRPFIG 576
           VDAIK ELERL LDKV+ NLGLC+SVYDI S+EGGFI+PGEG STYKV FRLL+FRPFIG
Sbjct: 86  VDAIKAELERLLLDKVVANLGLCVSVYDILSVEGGFIFPGEGCSTYKVSFRLLMFRPFIG 145

Query: 575 EVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEMGEDGIWVWKHEFGD-LAMDLDE 399
           EV+  K+   D  GL ++L FFSDI +P HL+   +  GEDG W  K E GD L +D D+
Sbjct: 146 EVLVGKISGYDEKGLQVSLDFFSDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDTDD 205

Query: 398 EVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDGLGLISWWA 261
           E+   V+ I YP IPVEQ  + +PFAPMQI G I GDGLGL++WWA
Sbjct: 206 EIRFLVSSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWA 251


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  208 bits (530), Expect = 3e-51
 Identities = 103/192 (53%), Positives = 133/192 (69%), Gaps = 6/192 (3%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MFYLSLIE             L +AIK ELE L+LDKVI NLGLCISVYDIRS++GGF++
Sbjct: 1   MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISVYDIRSIDGGFVF 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPK---- 474
           PG+G+STY V FRL++FRPF+GE+I AKLK SDA GL L+LGFF DI++PVHL+P     
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDDIYIPVHLMPNPCHC 120

Query: 473 --ESEMGEDGIWVWKHEFGDLAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGE 300
               E     IW+W ++     +D  +E+  +V  ++YP IPVEQ   ++PFAPM I+G 
Sbjct: 121 EPNPEKKGQVIWIWDYQEQKFPIDGIDEIRFQVQSVSYPPIPVEQPKESKPFAPMVIMGS 180

Query: 299 IYGDGLGLISWW 264
           +  DGLG +SWW
Sbjct: 181 LDYDGLGPVSWW 192


>tpg|DAA62512.1| TPA: DNA-directed RNA polymerase III subunit polypeptide [Zea mays]
          Length = 290

 Score =  207 bits (528), Expect = 5e-51
 Identities = 106/190 (55%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
 Frame = -3

Query: 827 GRMFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGF 648
           GRMF LS IE             L DAIK ELERL+LDKVIT LGLC+SVYDIRS+EGG 
Sbjct: 87  GRMFSLSQIEHDLPMPPHLLSRPLPDAIKAELERLFLDKVITKLGLCVSVYDIRSIEGGS 146

Query: 647 IYPGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKES 468
           I+PGEG STYKV FRLL+F+PF GE++  ++   D  GL ++L FFSDI +P HL+   +
Sbjct: 147 IHPGEGCSTYKVSFRLLMFKPFNGEILVGRITGYDDKGLQVSLEFFSDICIPGHLMQFGT 206

Query: 467 EMGEDGIWVWKHEFGD-LAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYG 291
             G DG W+ K E GD L +DLD+E+   V+   YP IP++Q+ +  PFAPMQI+G I G
Sbjct: 207 VRGPDGRWMLKTELGDELYLDLDDEIRFLVSSTKYPPIPIDQNEDDPPFAPMQIVGSIKG 266

Query: 290 DGLGLISWWA 261
           DGLGL+ WWA
Sbjct: 267 DGLGLLVWWA 276


>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  207 bits (528), Expect = 5e-51
 Identities = 101/192 (52%), Positives = 134/192 (69%), Gaps = 6/192 (3%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MF+LSLIE             L +AIK ELE L+LDKV+ NLGLCISVYDIRS++GGF++
Sbjct: 1   MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISVYDIRSIDGGFVF 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPK---- 474
           PG+G+STY V FRL++FRPF+GE+I AKLK SDA GL L+LGFF DI++PVHL+P     
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDDIYIPVHLMPNPCHC 120

Query: 473 --ESEMGEDGIWVWKHEFGDLAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGE 300
             + E     IW+W ++     +D  +E+  +V  ++YP IPVEQ   ++PFAPM I+G 
Sbjct: 121 EPDPENKSQVIWIWDYQEQKFPIDGLDEIRFQVQSVSYPPIPVEQPKESKPFAPMMIMGS 180

Query: 299 IYGDGLGLISWW 264
           +  DGLG +SWW
Sbjct: 181 LDYDGLGPVSWW 192


>gb|EMS46002.1| DNA-directed RNA polymerase III subunit RPC8 [Triticum urartu]
          Length = 200

 Score =  207 bits (527), Expect = 6e-51
 Identities = 101/166 (60%), Positives = 125/166 (75%), Gaps = 1/166 (0%)
 Frame = -3

Query: 755 VDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIYPGEGSSTYKVVFRLLIFRPFIG 576
           VDAIK ELERL+LDKV+ NLGLC+SVYDI ++EGGFI+PGEG STYKV FRLL+FRPFIG
Sbjct: 11  VDAIKAELERLFLDKVVANLGLCVSVYDILAVEGGFIFPGEGCSTYKVSFRLLMFRPFIG 70

Query: 575 EVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEMGEDGIWVWKHEFGD-LAMDLDE 399
           EV+  K+   D  GL ++L FF+DI +P HL+   +  GEDG W  K E GD L +D+D+
Sbjct: 71  EVLVGKISGYDEKGLQVSLDFFTDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDIDD 130

Query: 398 EVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDGLGLISWWA 261
           E+    + I YP IPVEQ  + +PFAPMQI G I GDGLGL++WWA
Sbjct: 131 EIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWA 176


>ref|XP_002988954.1| hypothetical protein SELMODRAFT_128885 [Selaginella moellendorffii]
           gi|300143291|gb|EFJ09983.1| hypothetical protein
           SELMODRAFT_128885 [Selaginella moellendorffii]
          Length = 187

 Score =  205 bits (522), Expect = 2e-50
 Identities = 97/187 (51%), Positives = 135/187 (72%), Gaps = 1/187 (0%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MF LS +              L+DAI  E+ RL+LDKV+ +LGLC+S+YDI+S+EGGF++
Sbjct: 1   MFVLSKLRDTLRIPPANLVLPLLDAITLEIHRLFLDKVVKDLGLCVSLYDIQSIEGGFVF 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PG+G+ TY V F+L++FRPF GE++ AKLK  D  GL L++GFF DI VP H L + S+ 
Sbjct: 61  PGDGAPTYTVEFQLVMFRPFPGEILVAKLKKCDKNGLVLSMGFFEDIIVPHHQLQQPSKF 120

Query: 461 GE-DGIWVWKHEFGDLAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDG 285
            E + +WVW ++  ++ MDL+EEV  RV K+ YP IP+EQ+ +AQPFAPM++IG+I  DG
Sbjct: 121 DENEKLWVWNYQENEMFMDLEEEVRFRVLKVRYPPIPLEQERDAQPFAPMEVIGDINSDG 180

Query: 284 LGLISWW 264
           LGL+SWW
Sbjct: 181 LGLVSWW 187


>gb|ACR34942.1| unknown [Zea mays]
          Length = 202

 Score =  203 bits (517), Expect = 9e-50
 Identities = 104/188 (55%), Positives = 130/188 (69%), Gaps = 1/188 (0%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MF LS IE             L DAIK ELERL+LDKVIT LGLC+SVYDIRS+EGG I+
Sbjct: 1   MFSLSQIEHDLPMPPHLLSRPLPDAIKAELERLFLDKVITKLGLCVSVYDIRSIEGGSIH 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PGEG STYKV FRLL+F+PF GE++  ++   D  GL ++L FFSDI +P HL+   +  
Sbjct: 61  PGEGCSTYKVSFRLLMFKPFNGEILVGRITGYDDKGLQVSLEFFSDICIPGHLMQFGTVR 120

Query: 461 GEDGIWVWKHEFGD-LAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDG 285
           G DG W+ K E GD L +DLD+E+   V+   YP IP++Q+ +  PFAPMQI+G I GDG
Sbjct: 121 GPDGRWMLKTELGDELYLDLDDEIRFLVSSTKYPPIPIDQNEDDPPFAPMQIVGSIKGDG 180

Query: 284 LGLISWWA 261
           LGL+ WWA
Sbjct: 181 LGLLVWWA 188


>ref|XP_002460684.1| hypothetical protein SORBIDRAFT_02g033110 [Sorghum bicolor]
           gi|241924061|gb|EER97205.1| hypothetical protein
           SORBIDRAFT_02g033110 [Sorghum bicolor]
          Length = 202

 Score =  202 bits (515), Expect = 1e-49
 Identities = 104/188 (55%), Positives = 130/188 (69%), Gaps = 1/188 (0%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MF LS IE             L DAIK ELERL+LDKVI NLGLC+SVYDIRS+EGG I+
Sbjct: 1   MFALSQIEHDLPMPPHLLSRPLPDAIKAELERLFLDKVIANLGLCVSVYDIRSIEGGSIH 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PG+G STYKV FRLL+F+PF GEV+  ++   D  GL ++L FFSDI +P HL+   +  
Sbjct: 61  PGQGCSTYKVSFRLLMFKPFNGEVLVGRIIGYDDKGLQVSLDFFSDISIPGHLMQFGTVR 120

Query: 461 GEDGIWVWKHEFGD-LAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDG 285
           G DG W+ K E GD L +DLD+E+   V+   YP IP++Q  +  PFAPMQI+G I GDG
Sbjct: 121 GPDGRWMLKTEDGDELYLDLDDEIRFLVSSTKYPRIPIDQKEDDPPFAPMQIVGSIKGDG 180

Query: 284 LGLISWWA 261
           LGL++WWA
Sbjct: 181 LGLLAWWA 188


>ref|XP_004957678.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc8-like
           isoform X2 [Setaria italica]
          Length = 200

 Score =  202 bits (514), Expect = 2e-49
 Identities = 105/188 (55%), Positives = 130/188 (69%), Gaps = 1/188 (0%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MF LSLIE             L DAIK ELERL+LDKVI NLGLC+SVYDIRSLEGG I+
Sbjct: 1   MFSLSLIEHDLPMPPHLLSRPLPDAIKAELERLFLDKVIANLGLCVSVYDIRSLEGGSIH 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PGEG S YKV FRLL+FRPF GEV+  ++   D  GL ++L FF+DI +P HL+   +  
Sbjct: 61  PGEGCSIYKVSFRLLMFRPFNGEVLVGRISGYDDKGLQVSLEFFNDICIPGHLMQFGTVR 120

Query: 461 GEDGIWVWKHEFGD-LAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDG 285
           G DG W+ + E  D L +DLD+E+   V+   YP IP+EQ A+  PF+PMQI+G I GDG
Sbjct: 121 GPDGRWMLRTEDNDELYLDLDDEIRFLVSGTKYPPIPIEQKADDPPFSPMQIVGSIKGDG 180

Query: 284 LGLISWWA 261
           LGL++WWA
Sbjct: 181 LGLLAWWA 188


>ref|NP_001147612.1| DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide [Zea
           mays] gi|195612502|gb|ACG28081.1| DNA-directed RNA
           polymerase III subunit 22.9 kDa polypeptide [Zea mays]
          Length = 202

 Score =  201 bits (512), Expect = 3e-49
 Identities = 103/188 (54%), Positives = 129/188 (68%), Gaps = 1/188 (0%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MF LS IE             L D IK ELERL+LDKVIT LGLC+SVYDIRS+EGG I+
Sbjct: 1   MFSLSQIEHDLPMPPHLLSRPLPDXIKAELERLFLDKVITKLGLCVSVYDIRSIEGGSIH 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PGEG STYKV FRLL+F+PF GE++  ++   D  GL ++L FFSDI +P HL+   +  
Sbjct: 61  PGEGCSTYKVSFRLLMFKPFNGEILVGRITGYDDKGLQVSLEFFSDICIPGHLMQFGTVR 120

Query: 461 GEDGIWVWKHEFGD-LAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDG 285
           G DG W+ K E GD L +DLD+E+   V+   YP IP++Q+ +  PFAPMQI+G I GDG
Sbjct: 121 GPDGRWMLKTELGDELYLDLDDEIRFLVSSTKYPPIPIDQNEDDPPFAPMQIVGSIKGDG 180

Query: 284 LGLISWWA 261
           LGL+ WWA
Sbjct: 181 LGLLVWWA 188


>gb|EMT18324.1| DNA-directed RNA polymerase III subunit RPC8 [Aegilops tauschii]
          Length = 223

 Score =  201 bits (511), Expect = 4e-49
 Identities = 100/166 (60%), Positives = 124/166 (74%), Gaps = 2/166 (1%)
 Frame = -3

Query: 755 VDAIKDELERLYLDKVIT-NLGLCISVYDIRSLEGGFIYPGEGSSTYKVVFRLLIFRPFI 579
           VDAIK ELERL+LDKV+  NLGLC+SVYDI ++EGGFI+PGEG STYKV FRLL+FRPFI
Sbjct: 11  VDAIKAELERLFLDKVVVVNLGLCVSVYDILAVEGGFIFPGEGCSTYKVSFRLLMFRPFI 70

Query: 578 GEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEMGEDGIWVWKHEFGD-LAMDLD 402
           GEV+  K+   D  GL ++L FF+DI +P HL+   +  GEDG W  K E GD L +D+D
Sbjct: 71  GEVLVGKISGYDEKGLQVSLDFFTDICIPGHLMQFGTVRGEDGRWALKTEDGDELHLDID 130

Query: 401 EEVNVRVTKINYPSIPVEQDANAQPFAPMQIIGEIYGDGLGLISWW 264
           +E+    + I YP IPVEQ  + +PFAPMQI G I GDGLGL++WW
Sbjct: 131 DEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWW 176


>gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Morus notabilis]
          Length = 200

 Score =  199 bits (507), Expect = 1e-48
 Identities = 102/194 (52%), Positives = 131/194 (67%), Gaps = 8/194 (4%)
 Frame = -3

Query: 821 MFYLSLIEXXXXXXXXXXXXXLVDAIKDELERLYLDKVITNLGLCISVYDIRSLEGGFIY 642
           MFYLS IE             L +AIK ELE+L+LDKVI NLGLCISVYDI S+EGGFI+
Sbjct: 1   MFYLSRIEHTLRVPPDILSRPLTEAIKVELEKLFLDKVIANLGLCISVYDIISIEGGFIF 60

Query: 641 PGEGSSTYKVVFRLLIFRPFIGEVICAKLKASDATGLHLTLGFFSDIHVPVHLLPKESEM 462
           PG+G++TY  VF +++FRPF+GE+I AK+K SDA GL LTLGFF DI++P + LP  S  
Sbjct: 61  PGDGAATYTAVFTMIMFRPFVGEIISAKVKESDANGLRLTLGFFEDIYIPANFLPDPSRP 120

Query: 461 GEDG------IWVWKHEFGD--LAMDLDEEVNVRVTKINYPSIPVEQDANAQPFAPMQII 306
             D        W+W  EFG+    +D ++E+  +V  +NYP IPVEQ   ++PFAPM I 
Sbjct: 121 EPDPRKRDRVTWIW--EFGEQKYVIDGEDEIRFQVHSVNYPPIPVEQPKESKPFAPMVIT 178

Query: 305 GEIYGDGLGLISWW 264
           G +  DGLG +SWW
Sbjct: 179 GSLDCDGLGPVSWW 192