BLASTX nr result
ID: Zingiber23_contig00008429
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00008429
(737 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare] 204 4e-79
ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II su... 204 4e-79
dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgar... 204 4e-79
ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II su... 201 2e-78
ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group] g... 200 3e-78
ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polype... 201 6e-78
ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II su... 194 1e-76
gb|AFK39298.1| unknown [Lotus japonicus] 190 2e-75
gb|EOY33916.1| DNA-directed RNA polymerase II isoform 1 [Theobro... 189 2e-75
ref|XP_004240381.1| PREDICTED: DNA-directed RNA polymerase II su... 190 3e-75
ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 ... 189 3e-75
ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su... 190 4e-75
ref|XP_004489626.1| PREDICTED: DNA-directed RNA polymerase II su... 188 5e-75
ref|XP_004303144.1| PREDICTED: DNA-directed RNA polymerase II su... 188 5e-75
gb|EMJ13349.1| hypothetical protein PRUPE_ppa012276mg [Prunus pe... 188 5e-75
ref|XP_003608502.1| DNA-directed RNA polymerase II subunit RPB7 ... 188 1e-74
ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypep... 187 1e-74
gb|EMJ10876.1| hypothetical protein PRUPE_ppa012285mg [Prunus pe... 190 1e-74
ref|XP_006424920.1| hypothetical protein CICLE_v10029380mg [Citr... 185 4e-74
ref|XP_002298912.1| DNA-directed RNA polymerase II 19 kDa polype... 186 5e-74
>dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 204 bits (520), Expect(2) = 4e-79
Identities = 99/101 (98%), Positives = 99/101 (98%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR
Sbjct: 60 MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 119
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
EGTGFVTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 120 EGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 160
Score = 117 bits (293), Expect(2) = 4e-79
Identities = 56/59 (94%), Positives = 59/59 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPG 611
DMEFQSGD+PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG
Sbjct: 175 DMEFQSGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 233
>ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Brachypodium distachyon]
Length = 177
Score = 204 bits (520), Expect(2) = 4e-79
Identities = 99/101 (98%), Positives = 99/101 (98%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
EGTGFVTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 EGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 117 bits (293), Expect(2) = 4e-79
Identities = 56/59 (94%), Positives = 59/59 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPG 611
DMEFQSGD+PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG
Sbjct: 116 DMEFQSGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 174
>dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505504|dbj|BAJ95423.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|475564192|gb|EMT14471.1|
DNA-directed RNA polymerase II subunit RPB7 [Aegilops
tauschii]
Length = 177
Score = 204 bits (520), Expect(2) = 4e-79
Identities = 99/101 (98%), Positives = 99/101 (98%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
EGTGFVTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 EGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 117 bits (293), Expect(2) = 4e-79
Identities = 56/59 (94%), Positives = 59/59 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPG 611
DMEFQSGD+PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG
Sbjct: 116 DMEFQSGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 174
>ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Oryza
brachyantha]
Length = 177
Score = 201 bits (510), Expect(2) = 2e-78
Identities = 96/101 (95%), Positives = 99/101 (98%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFGPHLRDKLV+KL+KDVEGTCSGRHGFVVAITGVEDIGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
EGTG+VTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 119 bits (297), Expect(2) = 2e-78
Identities = 57/59 (96%), Positives = 59/59 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPG 611
DMEFQSGD+PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG
Sbjct: 116 DMEFQSGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 174
>ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group]
gi|50878367|gb|AAT85142.1| putative RNA polymerase II
subunit 5 [Oryza sativa Japonica Group]
gi|113579034|dbj|BAF17397.1| Os05g0400700 [Oryza sativa
Japonica Group] gi|125552268|gb|EAY97977.1| hypothetical
protein OsI_19896 [Oryza sativa Indica Group]
gi|215704281|dbj|BAG93121.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218196761|gb|EEC79188.1| hypothetical protein
OsI_19893 [Oryza sativa Indica Group]
gi|222631528|gb|EEE63660.1| hypothetical protein
OsJ_18478 [Oryza sativa Japonica Group]
Length = 177
Score = 200 bits (509), Expect(2) = 3e-78
Identities = 95/101 (94%), Positives = 99/101 (98%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFGPHLRDKLV+KL+KDVEGTCSGRHGFVVAITGVED+GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDVGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
EGTG+VTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 119 bits (297), Expect(2) = 3e-78
Identities = 57/59 (96%), Positives = 59/59 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPG 611
DMEFQSGD+PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG
Sbjct: 116 DMEFQSGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 174
>ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polypeptide [Zea mays]
gi|242056199|ref|XP_002457245.1| hypothetical protein
SORBIDRAFT_03g003990 [Sorghum bicolor]
gi|242090461|ref|XP_002441063.1| hypothetical protein
SORBIDRAFT_09g019690 [Sorghum bicolor]
gi|514750630|ref|XP_004962151.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like [Setaria italica]
gi|194708012|gb|ACF88090.1| unknown [Zea mays]
gi|195628342|gb|ACG36001.1| DNA-directed RNA polymerase
II 19 kDa polypeptide [Zea mays]
gi|241929220|gb|EES02365.1| hypothetical protein
SORBIDRAFT_03g003990 [Sorghum bicolor]
gi|241946348|gb|EES19493.1| hypothetical protein
SORBIDRAFT_09g019690 [Sorghum bicolor]
gi|413945277|gb|AFW77926.1| DNA-directed RNA polymerase
II polypeptide [Zea mays]
Length = 177
Score = 201 bits (510), Expect(2) = 6e-78
Identities = 96/101 (95%), Positives = 99/101 (98%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFGPHLRDKLV+KL+KDVEGTCSGRHGFVVAITGVEDIGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
EGTG+VTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 117 bits (293), Expect(2) = 6e-78
Identities = 56/59 (94%), Positives = 59/59 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPG 611
DMEFQSGD+PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG
Sbjct: 116 DMEFQSGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPG 174
>ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
vinifera] gi|147841138|emb|CAN75204.1| hypothetical
protein VITISV_042914 [Vitis vinifera]
gi|297745997|emb|CBI16053.3| unnamed protein product
[Vitis vinifera]
Length = 176
Score = 194 bits (492), Expect(2) = 1e-76
Identities = 92/101 (91%), Positives = 97/101 (96%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFG HLRD LVAKL+KDVEGTCSGRHGFVVAITG+E++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRHLRDNLVAKLVKDVEGTCSGRHGFVVAITGIENVGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFVTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 120 bits (300), Expect(2) = 1e-76
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 608
DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 116 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>gb|AFK39298.1| unknown [Lotus japonicus]
Length = 176
Score = 190 bits (482), Expect(2) = 2e-75
Identities = 90/101 (89%), Positives = 97/101 (96%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPR+FG +LRD LVAKLMKDVEGTCSGRHGFVVA+TG+E++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIENVGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFVTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 120 bits (300), Expect(2) = 2e-75
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 608
DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 116 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>gb|EOY33916.1| DNA-directed RNA polymerase II isoform 1 [Theobroma cacao]
Length = 176
Score = 189 bits (481), Expect(2) = 2e-75
Identities = 89/101 (88%), Positives = 97/101 (96%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFG +LR+ LV+KLMKDVEGTCSGRHGFVVAITG+E++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFVTFPVKYQ VVFRPFKGE+LEAVVTMVNKMGFFAEA
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEA 101
Score = 120 bits (300), Expect(2) = 2e-75
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 608
DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 116 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_004240381.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Solanum lycopersicum] gi|565385656|ref|XP_006358706.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB7-like [Solanum tuberosum]
Length = 177
Score = 190 bits (483), Expect(2) = 3e-75
Identities = 90/101 (89%), Positives = 96/101 (95%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFG LR+KLV+KLMKDVEGTCSGRHGF+VAITG+E +GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRDLREKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFVTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 119 bits (297), Expect(2) = 3e-75
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGV 614
DMEFQSGD+PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG
Sbjct: 116 DMEFQSGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGT 175
Query: 615 TA 620
A
Sbjct: 176 NA 177
>ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 [Glycine max]
gi|356512183|ref|XP_003524800.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like isoform X1 [Glycine
max] gi|502141876|ref|XP_004504682.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like [Cicer
arietinum] gi|571455285|ref|XP_006580040.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like isoform
X2 [Glycine max] gi|1173137|sp|P46279.1|RPB7_SOYBN
RecName: Full=DNA-directed RNA polymerase II subunit
RPB7; Short=RNA polymerase II subunit B7
gi|170052|gb|AAA34005.1| RNA polymerase II [Glycine max]
gi|255626843|gb|ACU13766.1| unknown [Glycine max]
gi|558695762|gb|AHA84235.1| DNA-directed RNA polymerase
II subunit RPB7 [Phaseolus vulgaris]
gi|561032343|gb|ESW30922.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
gi|561032344|gb|ESW30923.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
gi|561032345|gb|ESW30924.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
Length = 176
Score = 189 bits (480), Expect(2) = 3e-75
Identities = 90/101 (89%), Positives = 97/101 (96%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPR+FG +LRD LV+KLMKDVEGTCSGRHGFVVA+TG+E+IGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFVTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 120 bits (300), Expect(2) = 3e-75
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 608
DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 116 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Cucumis sativus] gi|449518487|ref|XP_004166273.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB7-like [Cucumis sativus]
Length = 176
Score = 190 bits (483), Expect(2) = 4e-75
Identities = 91/101 (90%), Positives = 97/101 (96%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFG +LR+ LV+KLMKDVEGTCSGRHGFVVAITG+E+IGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFVTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 118 bits (296), Expect(2) = 4e-75
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 608
DMEFQSGD+PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 116 DMEFQSGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_004489626.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Cicer
arietinum]
Length = 176
Score = 188 bits (478), Expect(2) = 5e-75
Identities = 89/101 (88%), Positives = 97/101 (96%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPR+FG +LRD LV+KLMKDVEGTCSGRHGFVVA+TG+E+IGKG+IR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGIIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFVTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 120 bits (300), Expect(2) = 5e-75
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 608
DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 116 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_004303144.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Fragaria vesca subsp. vesca]
Length = 176
Score = 188 bits (478), Expect(2) = 5e-75
Identities = 90/101 (89%), Positives = 97/101 (96%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFG +LR+ LVAKLMKDVEGTCSG+HGFVVAITG+E+IGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFV+FPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 DGTGFVSFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 120 bits (300), Expect(2) = 5e-75
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 608
DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 116 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>gb|EMJ13349.1| hypothetical protein PRUPE_ppa012276mg [Prunus persica]
Length = 176
Score = 188 bits (478), Expect(2) = 5e-75
Identities = 90/101 (89%), Positives = 97/101 (96%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFG +LR+ LVAKLMKDVEGTCSG+HGFVVAITG+E+IGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFV+FPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 DGTGFVSFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 120 bits (300), Expect(2) = 5e-75
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 608
DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 116 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_003608502.1| DNA-directed RNA polymerase II subunit RPB7 [Medicago truncatula]
gi|217071674|gb|ACJ84197.1| unknown [Medicago
truncatula] gi|355509557|gb|AES90699.1| DNA-directed RNA
polymerase II subunit RPB7 [Medicago truncatula]
gi|388514911|gb|AFK45517.1| unknown [Medicago
truncatula]
Length = 176
Score = 188 bits (478), Expect(2) = 1e-74
Identities = 89/101 (88%), Positives = 97/101 (96%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPR+FG +LRD LV+KLMKDVEGTCSGRHGFVVA+TG+E+IGKG+IR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGIIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFVTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 119 bits (297), Expect(2) = 1e-74
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 608
DMEFQ+GDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 116 DMEFQTGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
[Ricinus communis] gi|223540340|gb|EEF41911.1|
DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
putative [Ricinus communis]
Length = 176
Score = 187 bits (475), Expect(2) = 1e-74
Identities = 89/101 (88%), Positives = 96/101 (95%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPR+FG +LR+ LV+KLMKDVEGTCSGRHGFVVAITG+E +GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFVTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 120 bits (300), Expect(2) = 1e-74
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 608
DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 116 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>gb|EMJ10876.1| hypothetical protein PRUPE_ppa012285mg [Prunus persica]
Length = 176
Score = 190 bits (482), Expect(2) = 1e-74
Identities = 91/101 (90%), Positives = 97/101 (96%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFG +LR+ LVAKLMKDVEGTCSG+HGFVVAITG+E+IGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFVTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 117 bits (292), Expect(2) = 1e-74
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 608
DMEFQSGDMP YTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 116 DMEFQSGDMPYYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_006424920.1| hypothetical protein CICLE_v10029380mg [Citrus clementina]
gi|568870408|ref|XP_006488396.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like [Citrus sinensis]
gi|557526854|gb|ESR38160.1| hypothetical protein
CICLE_v10029380mg [Citrus clementina]
Length = 176
Score = 185 bits (470), Expect(2) = 4e-74
Identities = 88/101 (87%), Positives = 96/101 (95%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPRHFG +LR+ +++KLMKDVEGTCSGRHGFVVAIT VE+IGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLREHIISKLMKDVEGTCSGRHGFVVAITSVENIGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFVTFPVKYQ VVFRPFKGEILEAVV+MVNKMGFFAEA
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVSMVNKMGFFAEA 101
Score = 120 bits (300), Expect(2) = 4e-74
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 608
DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 116 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_002298912.1| DNA-directed RNA polymerase II 19 kDa polypeptide family protein
[Populus trichocarpa] gi|222846170|gb|EEE83717.1|
DNA-directed RNA polymerase II 19 kDa polypeptide family
protein [Populus trichocarpa]
Length = 176
Score = 186 bits (472), Expect(2) = 5e-74
Identities = 89/101 (88%), Positives = 96/101 (95%)
Frame = +1
Query: 115 MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 294
MFFHI LERNMQLHPR FG +LR+ +V+KLMKDVEGTCSGRHGFVVAITG+E+IGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLRENIVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60
Query: 295 EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEA 417
+GTGFVTFPVKYQ VVFRPFKGEILEAVVTMVNKMGFFAEA
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 101
Score = 119 bits (297), Expect(2) = 5e-74
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = +3
Query: 435 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 608
DMEFQ+GDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 116 DMEFQTGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173