BLASTX nr result
ID: Zingiber23_contig00008183
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00008183
(237 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006836242.1| hypothetical protein AMTR_s00101p00122520 [A... 82 6e-14
ref|XP_003624916.1| R3H domain-containing protein [Medicago trun... 77 2e-12
ref|XP_003624915.1| R3H domain-containing protein [Medicago trun... 77 2e-12
ref|NP_001148805.1| nucleic acid binding protein [Zea mays] gi|1... 76 5e-12
gb|ACF88162.1| unknown [Zea mays] 76 5e-12
gb|ACF85224.1| unknown [Zea mays] gi|224031255|gb|ACN34703.1| un... 76 5e-12
ref|XP_004962092.1| PREDICTED: uncharacterized protein LOC101778... 75 7e-12
ref|XP_004962091.1| PREDICTED: uncharacterized protein LOC101778... 75 7e-12
gb|AFW78003.1| hypothetical protein ZEAMMB73_274612 [Zea mays] 74 2e-11
gb|ACF81487.1| unknown [Zea mays] gi|413945353|gb|AFW78002.1| DI... 74 2e-11
ref|NP_001105871.1| DIP1 [Zea mays] gi|72536048|gb|AAZ73119.1| D... 74 2e-11
ref|XP_004493365.1| PREDICTED: uncharacterized protein LOC101493... 74 2e-11
gb|EOY08766.1| Single-stranded nucleic acid binding R3H protein ... 73 5e-11
gb|EOY08765.1| Single-stranded nucleic acid binding R3H protein ... 73 5e-11
gb|EOY08764.1| Single-stranded nucleic acid binding R3H protein ... 73 5e-11
ref|XP_002521584.1| r3h domain containing protein, putative [Ric... 71 1e-10
ref|XP_004167787.1| PREDICTED: uncharacterized protein LOC101224... 70 4e-10
ref|XP_004136625.1| PREDICTED: uncharacterized protein LOC101215... 70 4e-10
ref|XP_003568455.1| PREDICTED: uncharacterized protein LOC100835... 70 4e-10
gb|ABS18738.1| superoxide dismutase-like protein [Oryza sativa J... 70 4e-10
>ref|XP_006836242.1| hypothetical protein AMTR_s00101p00122520 [Amborella trichopoda]
gi|548838742|gb|ERM99095.1| hypothetical protein
AMTR_s00101p00122520 [Amborella trichopoda]
Length = 343
Score = 82.4 bits (202), Expect = 6e-14
Identities = 50/89 (56%), Positives = 57/89 (64%), Gaps = 12/89 (13%)
Frame = -3
Query: 232 AVKSVEERKEEYNRARARIFNGSNSLDMDAPSA-ASTD-----------SDXXXXXXXXX 89
AV+SVEERKEEY+RARARIFNGS S D + SA A+TD
Sbjct: 150 AVRSVEERKEEYDRARARIFNGSGSSDSEVVSAPAATDGRSSCSSGDENESGDLNVQDEV 209
Query: 88 ERIHSKDGSYRVAIFRDREKDRSDPDYDR 2
E+ ++DG RVAIFRDREKDRSDPDYDR
Sbjct: 210 EKTCNRDGICRVAIFRDREKDRSDPDYDR 238
>ref|XP_003624916.1| R3H domain-containing protein [Medicago truncatula]
gi|355499931|gb|AES81134.1| R3H domain-containing
protein [Medicago truncatula]
Length = 244
Score = 77.0 bits (188), Expect = 2e-12
Identities = 50/89 (56%), Positives = 56/89 (62%), Gaps = 13/89 (14%)
Frame = -3
Query: 229 VKSVEERKEEYNRARARIFNGSNSLD-MDAPSAASTD----------SDXXXXXXXXXER 83
++SVEERKEEY+RARARIFNGS S D +D S TD S+ ER
Sbjct: 152 LRSVEERKEEYDRARARIFNGSTSFDSVDTSSMVPTDGKNSFMSKDESEISKIPMADSER 211
Query: 82 IHS-KDGSY-RVAIFRDREKDRSDPDYDR 2
S +D SY RVAI RDREKDRSDPDYDR
Sbjct: 212 FFSVRDNSYPRVAIIRDREKDRSDPDYDR 240
>ref|XP_003624915.1| R3H domain-containing protein [Medicago truncatula]
gi|124361205|gb|ABN09177.1| Single-stranded nucleic acid
binding R3H [Medicago truncatula]
gi|355499930|gb|AES81133.1| R3H domain-containing
protein [Medicago truncatula]
Length = 353
Score = 77.0 bits (188), Expect = 2e-12
Identities = 50/89 (56%), Positives = 56/89 (62%), Gaps = 13/89 (14%)
Frame = -3
Query: 229 VKSVEERKEEYNRARARIFNGSNSLD-MDAPSAASTD----------SDXXXXXXXXXER 83
++SVEERKEEY+RARARIFNGS S D +D S TD S+ ER
Sbjct: 152 LRSVEERKEEYDRARARIFNGSTSFDSVDTSSMVPTDGKNSFMSKDESEISKIPMADSER 211
Query: 82 IHS-KDGSY-RVAIFRDREKDRSDPDYDR 2
S +D SY RVAI RDREKDRSDPDYDR
Sbjct: 212 FFSVRDNSYPRVAIIRDREKDRSDPDYDR 240
>ref|NP_001148805.1| nucleic acid binding protein [Zea mays] gi|195622268|gb|ACG32964.1|
nucleic acid binding protein [Zea mays]
Length = 349
Score = 75.9 bits (185), Expect = 5e-12
Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Frame = -3
Query: 232 AVKSVEERKEEYNRARARIFNGSNSLDMDAPSAAST-----DSDXXXXXXXXXERIHSKD 68
A K+VEER EEYN+ARARIFNGS S D DA S T D ++ + +
Sbjct: 172 APKTVEERIEEYNKARARIFNGSVSADSDAASVLGTLCTGRDESVNVEPXVDEIKVSTMN 231
Query: 67 GSYRVAIFRDREKDRSDPDYDR 2
RVA+F+D +KDRSDPDYDR
Sbjct: 232 NRSRVAVFKDTQKDRSDPDYDR 253
>gb|ACF88162.1| unknown [Zea mays]
Length = 349
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Frame = -3
Query: 232 AVKSVEERKEEYNRARARIFNGSNSLDMDAPSAAST-----DSDXXXXXXXXXERIHSKD 68
A K+VEER EEYN+ARARIFNGS S D DA S T D ++ + +
Sbjct: 172 APKTVEERIEEYNKARARIFNGSVSADSDAASVLGTLCTGRDESVNVEPSVDEIKVSTMN 231
Query: 67 GSYRVAIFRDREKDRSDPDYDR 2
RVA+F+D +KDRSDPDYDR
Sbjct: 232 NRSRVAVFKDTQKDRSDPDYDR 253
>gb|ACF85224.1| unknown [Zea mays] gi|224031255|gb|ACN34703.1| unknown [Zea mays]
gi|413949282|gb|AFW81931.1| nucleic acid binding protein
isoform 1 [Zea mays] gi|413949283|gb|AFW81932.1| nucleic
acid binding protein isoform 2 [Zea mays]
Length = 349
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Frame = -3
Query: 232 AVKSVEERKEEYNRARARIFNGSNSLDMDAPSAAST-----DSDXXXXXXXXXERIHSKD 68
A K+VEER EEYN+ARARIFNGS S D DA S T D ++ + +
Sbjct: 172 APKTVEERIEEYNKARARIFNGSVSADSDAASVLGTLCTGRDESVNVEPSVDEIKVSTMN 231
Query: 67 GSYRVAIFRDREKDRSDPDYDR 2
RVA+F+D +KDRSDPDYDR
Sbjct: 232 NRSRVAVFKDTQKDRSDPDYDR 253
>ref|XP_004962092.1| PREDICTED: uncharacterized protein LOC101778097 isoform X2 [Setaria
italica]
Length = 352
Score = 75.5 bits (184), Expect = 7e-12
Identities = 44/82 (53%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Frame = -3
Query: 232 AVKSVEERKEEYNRARARIFNGSNSLDMDAPS---AAST--DSDXXXXXXXXXERIHSKD 68
A K+VEER EEYN+ARARIFNGS S D DA S A ST D ++ + +
Sbjct: 173 APKTVEERIEEYNKARARIFNGSISADTDAASVLGALSTGRDEPVNVEPPADEIKVSTMN 232
Query: 67 GSYRVAIFRDREKDRSDPDYDR 2
RVA+F+D EKDRSDPDYDR
Sbjct: 233 SRSRVAVFKDTEKDRSDPDYDR 254
>ref|XP_004962091.1| PREDICTED: uncharacterized protein LOC101778097 isoform X1 [Setaria
italica]
Length = 361
Score = 75.5 bits (184), Expect = 7e-12
Identities = 44/82 (53%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Frame = -3
Query: 232 AVKSVEERKEEYNRARARIFNGSNSLDMDAPS---AAST--DSDXXXXXXXXXERIHSKD 68
A K+VEER EEYN+ARARIFNGS S D DA S A ST D ++ + +
Sbjct: 173 APKTVEERIEEYNKARARIFNGSISADTDAASVLGALSTGRDEPVNVEPPADEIKVSTMN 232
Query: 67 GSYRVAIFRDREKDRSDPDYDR 2
RVA+F+D EKDRSDPDYDR
Sbjct: 233 SRSRVAVFKDTEKDRSDPDYDR 254
>gb|AFW78003.1| hypothetical protein ZEAMMB73_274612 [Zea mays]
Length = 283
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Frame = -3
Query: 226 KSVEERKEEYNRARARIFNGSNSLDMDAPSAAST-----DSDXXXXXXXXXERIHSKDGS 62
K+V+ER EEYN+ARARIFNGS S D DA S T D ++ + +
Sbjct: 173 KTVDERIEEYNKARARIFNGSISADSDAASIMGTLSTGKDEPVNVDPSVDETKVSTMNSR 232
Query: 61 YRVAIFRDREKDRSDPDYDR 2
RVA+F+D EKDRSDPDYDR
Sbjct: 233 SRVAVFKDTEKDRSDPDYDR 252
>gb|ACF81487.1| unknown [Zea mays] gi|413945353|gb|AFW78002.1| DIP1 [Zea mays]
Length = 349
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Frame = -3
Query: 226 KSVEERKEEYNRARARIFNGSNSLDMDAPSAAST-----DSDXXXXXXXXXERIHSKDGS 62
K+V+ER EEYN+ARARIFNGS S D DA S T D ++ + +
Sbjct: 173 KTVDERIEEYNKARARIFNGSISADSDAASIMGTLSTGKDEPVNVDPSVDETKVSTMNSR 232
Query: 61 YRVAIFRDREKDRSDPDYDR 2
RVA+F+D EKDRSDPDYDR
Sbjct: 233 SRVAVFKDTEKDRSDPDYDR 252
>ref|NP_001105871.1| DIP1 [Zea mays] gi|72536048|gb|AAZ73119.1| DIP1 [Zea mays]
Length = 348
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Frame = -3
Query: 226 KSVEERKEEYNRARARIFNGSNSLDMDAPSAAST-----DSDXXXXXXXXXERIHSKDGS 62
K+V+ER EEYN+ARARIFNGS S D DA S T D ++ + +
Sbjct: 172 KTVDERIEEYNKARARIFNGSISADSDAASIMGTLSTGKDEPVNVDPSVDETKVSTMNSR 231
Query: 61 YRVAIFRDREKDRSDPDYDR 2
RVA+F+D EKDRSDPDYDR
Sbjct: 232 SRVAVFKDTEKDRSDPDYDR 251
>ref|XP_004493365.1| PREDICTED: uncharacterized protein LOC101493813 [Cicer arietinum]
Length = 354
Score = 73.9 bits (180), Expect = 2e-11
Identities = 47/91 (51%), Positives = 53/91 (58%), Gaps = 13/91 (14%)
Frame = -3
Query: 235 DAVKSVEERKEEYNRARARIFNGSNSLD-MDAPSAASTDSDXXXXXXXXXER-------- 83
+ ++SVEERKEEY+RARARIF+GS S D D PS D E
Sbjct: 151 NTLRSVEERKEEYDRARARIFSGSTSFDSSDTPSVVPIDGRHSLMNKDENETSKVPMSDS 210
Query: 82 ---IHSKDGSY-RVAIFRDREKDRSDPDYDR 2
I +D SY RVAI RDREKDRSDPDYDR
Sbjct: 211 ERCISIRDNSYPRVAIIRDREKDRSDPDYDR 241
>gb|EOY08766.1| Single-stranded nucleic acid binding R3H protein isoform 3
[Theobroma cacao]
Length = 246
Score = 72.8 bits (177), Expect = 5e-11
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 12/88 (13%)
Frame = -3
Query: 229 VKSVEERKEEYNRARARIFNGSNSLDMDAPSAAST------------DSDXXXXXXXXXE 86
V+SVEERKEEY+RARARIF+ +S D D S + + + +
Sbjct: 155 VRSVEERKEEYDRARARIFSSPSSSDSDDSSPQISVDGKNESLIRDENENCRNSVVDPEK 214
Query: 85 RIHSKDGSYRVAIFRDREKDRSDPDYDR 2
I +DG+ RVAIFRDREKDR+DPDYDR
Sbjct: 215 NITVRDGTCRVAIFRDREKDRTDPDYDR 242
>gb|EOY08765.1| Single-stranded nucleic acid binding R3H protein isoform 2
[Theobroma cacao]
Length = 315
Score = 72.8 bits (177), Expect = 5e-11
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 12/88 (13%)
Frame = -3
Query: 229 VKSVEERKEEYNRARARIFNGSNSLDMDAPSAAST------------DSDXXXXXXXXXE 86
V+SVEERKEEY+RARARIF+ +S D D S + + + +
Sbjct: 113 VRSVEERKEEYDRARARIFSSPSSSDSDDSSPQISVDGKNESLIRDENENCRNSVVDPEK 172
Query: 85 RIHSKDGSYRVAIFRDREKDRSDPDYDR 2
I +DG+ RVAIFRDREKDR+DPDYDR
Sbjct: 173 NITVRDGTCRVAIFRDREKDRTDPDYDR 200
>gb|EOY08764.1| Single-stranded nucleic acid binding R3H protein isoform 1
[Theobroma cacao]
Length = 357
Score = 72.8 bits (177), Expect = 5e-11
Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 12/88 (13%)
Frame = -3
Query: 229 VKSVEERKEEYNRARARIFNGSNSLDMDAPSAAST------------DSDXXXXXXXXXE 86
V+SVEERKEEY+RARARIF+ +S D D S + + + +
Sbjct: 155 VRSVEERKEEYDRARARIFSSPSSSDSDDSSPQISVDGKNESLIRDENENCRNSVVDPEK 214
Query: 85 RIHSKDGSYRVAIFRDREKDRSDPDYDR 2
I +DG+ RVAIFRDREKDR+DPDYDR
Sbjct: 215 NITVRDGTCRVAIFRDREKDRTDPDYDR 242
>ref|XP_002521584.1| r3h domain containing protein, putative [Ricinus communis]
gi|223539262|gb|EEF40855.1| r3h domain containing
protein, putative [Ricinus communis]
Length = 349
Score = 71.2 bits (173), Expect = 1e-10
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 13/91 (14%)
Frame = -3
Query: 235 DAVKSVEERKEEYNRARARIFNGSNSLDM-DAPSAASTD-----------SDXXXXXXXX 92
D V+SVEERKEEY+RARARIF+ +S ++ D S S D +
Sbjct: 144 DPVRSVEERKEEYDRARARIFSSPSSTNLDDVVSQGSIDRKSTNPSKDELENCRYSANDP 203
Query: 91 XERIHSKDGS-YRVAIFRDREKDRSDPDYDR 2
+ I+ +DG+ RVAIFRDREKDR+DPDYDR
Sbjct: 204 EKNINPRDGAPSRVAIFRDREKDRTDPDYDR 234
>ref|XP_004167787.1| PREDICTED: uncharacterized protein LOC101224356 [Cucumis sativus]
Length = 354
Score = 69.7 bits (169), Expect = 4e-10
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 12/89 (13%)
Frame = -3
Query: 232 AVKSVEERKEEYNRARARIFNGSNSLDMD-----APSAAS------TDSDXXXXXXXXXE 86
+V+SVEERKEEY+RARARIF+ +S ++D PS +++ E
Sbjct: 151 SVRSVEERKEEYDRARARIFSSPSSPEIDDTISQIPSEGKYACSNRDETEGCRTLGGELE 210
Query: 85 RIHSKDG-SYRVAIFRDREKDRSDPDYDR 2
+ + +DG + RVAIF+DREKDRSDPDYDR
Sbjct: 211 KFNGRDGMTSRVAIFKDREKDRSDPDYDR 239
>ref|XP_004136625.1| PREDICTED: uncharacterized protein LOC101215817 [Cucumis sativus]
Length = 401
Score = 69.7 bits (169), Expect = 4e-10
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 12/89 (13%)
Frame = -3
Query: 232 AVKSVEERKEEYNRARARIFNGSNSLDMD-----APSAAS------TDSDXXXXXXXXXE 86
+V+SVEERKEEY+RARARIF+ +S ++D PS +++ E
Sbjct: 198 SVRSVEERKEEYDRARARIFSSPSSPEIDDTISQIPSEGKYACSNRDETEGCRTLGGELE 257
Query: 85 RIHSKDG-SYRVAIFRDREKDRSDPDYDR 2
+ + +DG + RVAIF+DREKDRSDPDYDR
Sbjct: 258 KFNGRDGMTSRVAIFKDREKDRSDPDYDR 286
>ref|XP_003568455.1| PREDICTED: uncharacterized protein LOC100835943 [Brachypodium
distachyon]
Length = 348
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Frame = -3
Query: 232 AVKSVEERKEEYNRARARIFNGSNSLDMDAPS-----AASTDSDXXXXXXXXXERIHSKD 68
AVK+VEER ++YN+ARARIFNGS D++ S + + R+++ +
Sbjct: 168 AVKTVEERIDDYNKARARIFNGSIPADVEGTSDFGALSIGRNELMNVEHSLDENRVYAMN 227
Query: 67 GSYRVAIFRDREKDRSDPDYDR 2
RVA+F+D EKDRSDPDYDR
Sbjct: 228 SRSRVAVFKDAEKDRSDPDYDR 249
>gb|ABS18738.1| superoxide dismutase-like protein [Oryza sativa Japonica Group]
Length = 283
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Frame = -3
Query: 235 DAVKSVEERKEEYNRARARIFNGSNSLDMDAPS-----AASTDSDXXXXXXXXXERIHSK 71
+A ++VEER EEYN+ARARIFNGS S D++ S + + D ++++
Sbjct: 116 NAARTVEERIEEYNKARARIFNGSIS-DIEGTSDLGALSVARDEPINVEPPVDENKVNTM 174
Query: 70 DGSYRVAIFRDREKDRSDPDYDR 2
+ RVA+F+D EKDRSDPDYDR
Sbjct: 175 NSRSRVAVFKDTEKDRSDPDYDR 197