BLASTX nr result
ID: Zingiber23_contig00008113
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00008113
(395 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006476189.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 99 6e-19
ref|XP_006450563.1| hypothetical protein CICLE_v10008289mg [Citr... 99 6e-19
ref|NP_001054802.1| Os05g0179000 [Oryza sativa Japonica Group] g... 96 5e-18
ref|XP_006412451.1| hypothetical protein EUTSA_v10025242mg [Eutr... 95 1e-17
ref|XP_006283708.1| hypothetical protein CARUB_v10004779mg [Caps... 95 1e-17
ref|XP_002869261.1| hypothetical protein ARALYDRAFT_328473 [Arab... 95 1e-17
ref|NP_194986.2| C3H4 type zinc finger protein [Arabidopsis thal... 95 1e-17
emb|CAA18601.1| putative protein [Arabidopsis thaliana] gi|72701... 95 1e-17
ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 94 1e-17
ref|XP_003568812.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 94 2e-17
ref|XP_002516614.1| ring finger protein, putative [Ricinus commu... 94 2e-17
ref|XP_006654104.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 93 3e-17
gb|EMT29820.1| E3 ubiquitin-protein ligase [Aegilops tauschii] 93 3e-17
ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g1... 93 4e-17
ref|XP_003522643.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 93 4e-17
ref|XP_002324833.1| zinc finger family protein [Populus trichoca... 93 4e-17
emb|CBI20932.3| unnamed protein product [Vitis vinifera] 93 4e-17
gb|AFK45443.1| unknown [Lotus japonicus] 92 5e-17
ref|XP_004954169.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 92 7e-17
ref|XP_004291419.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 92 9e-17
>ref|XP_006476189.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Citrus
sinensis]
Length = 447
Score = 99.0 bits (245), Expect = 6e-19
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGGNNR 221
CICLAKY +N+ELRELPC HFFHK CVDKWLKINA CPLCK+E+ DT + SG N R
Sbjct: 362 CICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGDTVLGSISGANAR 419
>ref|XP_006450563.1| hypothetical protein CICLE_v10008289mg [Citrus clementina]
gi|567917118|ref|XP_006450565.1| hypothetical protein
CICLE_v10008289mg [Citrus clementina]
gi|557553789|gb|ESR63803.1| hypothetical protein
CICLE_v10008289mg [Citrus clementina]
gi|557553791|gb|ESR63805.1| hypothetical protein
CICLE_v10008289mg [Citrus clementina]
Length = 447
Score = 99.0 bits (245), Expect = 6e-19
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGGNNR 221
CICLAKY +N+ELRELPC HFFHK CVDKWLKINA CPLCK+E+ DT + SG N R
Sbjct: 362 CICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGDTVLGSISGANAR 419
>ref|NP_001054802.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|113578353|dbj|BAF16716.1| Os05g0179000 [Oryza sativa
Japonica Group] gi|215701280|dbj|BAG92704.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218196198|gb|EEC78625.1| hypothetical protein
OsI_18674 [Oryza sativa Indica Group]
gi|222630401|gb|EEE62533.1| hypothetical protein
OsJ_17331 [Oryza sativa Japonica Group]
Length = 407
Score = 95.9 bits (237), Expect = 5e-18
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGGNNR 221
CICLA+Y+DN++LRELPC HFFHK CVDKWLKINALCPLCK EI+ ++S + G R
Sbjct: 335 CICLARYVDNDDLRELPCAHFFHKDCVDKWLKINALCPLCKAEIDGVSTSAPAIGFGR 392
>ref|XP_006412451.1| hypothetical protein EUTSA_v10025242mg [Eutrema salsugineum]
gi|557113621|gb|ESQ53904.1| hypothetical protein
EUTSA_v10025242mg [Eutrema salsugineum]
Length = 435
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/55 (74%), Positives = 45/55 (81%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGG 230
CICLAKY +NEELRELPC HFFHK CVDKWLKINA CPLCK+E+ + S TS G
Sbjct: 352 CICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNSDLTSQG 406
>ref|XP_006283708.1| hypothetical protein CARUB_v10004779mg [Capsella rubella]
gi|482552413|gb|EOA16606.1| hypothetical protein
CARUB_v10004779mg [Capsella rubella]
Length = 454
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/55 (74%), Positives = 45/55 (81%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGG 230
CICLAKY +NEELRELPC HFFHK CVDKWLKINA CPLCK+E+ + S TS G
Sbjct: 363 CICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNSDLTSQG 417
>ref|XP_002869261.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata] gi|297315097|gb|EFH45520.1| hypothetical protein
ARALYDRAFT_328473 [Arabidopsis lyrata subsp. lyrata]
Length = 489
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/55 (74%), Positives = 45/55 (81%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGG 230
CICLAKY +NEELRELPC HFFHK CVDKWLKINA CPLCK+E+ + S TS G
Sbjct: 364 CICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNSDLTSQG 418
>ref|NP_194986.2| C3H4 type zinc finger protein [Arabidopsis thaliana]
gi|18377636|gb|AAL66968.1| unknown protein [Arabidopsis
thaliana] gi|19698907|gb|AAL91189.1| putative protein
[Arabidopsis thaliana] gi|20465641|gb|AAM20289.1|
unknown protein [Arabidopsis thaliana]
gi|332660687|gb|AEE86087.1| C3H4 type zinc finger
protein [Arabidopsis thaliana]
Length = 453
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/55 (74%), Positives = 45/55 (81%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGG 230
CICLAKY +NEELRELPC HFFHK CVDKWLKINA CPLCK+E+ + S TS G
Sbjct: 364 CICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNSDLTSQG 418
>emb|CAA18601.1| putative protein [Arabidopsis thaliana] gi|7270164|emb|CAB79977.1|
putative protein [Arabidopsis thaliana]
Length = 495
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/55 (74%), Positives = 45/55 (81%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGG 230
CICLAKY +NEELRELPC HFFHK CVDKWLKINA CPLCK+E+ + S TS G
Sbjct: 364 CICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNSDLTSQG 418
>ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus] gi|449499624|ref|XP_004160867.1| PREDICTED: E3
ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 424
Score = 94.4 bits (233), Expect = 1e-17
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGGNNR 221
CICLAKY +N+ELRELPC HFFHK CVDKWLKINALCPLCK E+ ++ + G N +
Sbjct: 364 CICLAKYANNDELRELPCSHFFHKDCVDKWLKINALCPLCKAEVGESIVGSLEGTNRQ 421
>ref|XP_003568812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 419
Score = 94.0 bits (232), Expect = 2e-17
Identities = 39/58 (67%), Positives = 50/58 (86%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGGNNR 221
CICLA+Y++N++LRELPC HFFHK CVDKWLKINALCPLCK EI+ ++S+++ G R
Sbjct: 347 CICLARYVNNDDLRELPCTHFFHKECVDKWLKINALCPLCKAEIDGGSTSSSALGFGR 404
>ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
gi|223544434|gb|EEF45955.1| ring finger protein,
putative [Ricinus communis]
Length = 437
Score = 93.6 bits (231), Expect = 2e-17
Identities = 39/60 (65%), Positives = 46/60 (76%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGGNNRNR 215
CICLAKY +N+ELRELPC HFFHK CVDKWLKINA CPLCKTE+ ++ + + N R
Sbjct: 363 CICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKTEVGESVMGSLTATNTGQR 422
>ref|XP_006654104.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Oryza
brachyantha]
Length = 406
Score = 93.2 bits (230), Expect = 3e-17
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGGNNR 221
CICLA+Y DN++LRELPC HFFHK CVDKWLKINALCPLCK EI+ ++ + G R
Sbjct: 334 CICLARYADNDDLRELPCAHFFHKDCVDKWLKINALCPLCKAEIDGVPTNAPAIGFGR 391
>gb|EMT29820.1| E3 ubiquitin-protein ligase [Aegilops tauschii]
Length = 609
Score = 93.2 bits (230), Expect = 3e-17
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGGNNRNR 215
CICLAKY NEELRELPC H FHK CVDKWLKINALCPLCK EI ++ ++ + + R
Sbjct: 331 CICLAKYAHNEELRELPCTHCFHKECVDKWLKINALCPLCKAEIASSSGTSDTRHIDHTR 390
Query: 214 W 212
W
Sbjct: 391 W 391
>ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 421
Score = 92.8 bits (229), Expect = 4e-17
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSG 233
CICLAKY +N+ELRELPC HFFHK CVDKWLKINALCPLCK E+ ++ + SG
Sbjct: 364 CICLAKYANNDELRELPCSHFFHKECVDKWLKINALCPLCKREVGESFLGSLSG 417
>ref|XP_003522643.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X1
[Glycine max] gi|571449542|ref|XP_006578174.1|
PREDICTED: E3 ubiquitin-protein ligase At1g12760-like
isoform X2 [Glycine max]
Length = 385
Score = 92.8 bits (229), Expect = 4e-17
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSG 233
CICLAKY +N+ELRELPC H FHK CVDKWLKINALCPLCK+E+ + + SG
Sbjct: 311 CICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSEVSENVRGSVSG 364
>ref|XP_002324833.1| zinc finger family protein [Populus trichocarpa]
gi|222866267|gb|EEF03398.1| zinc finger family protein
[Populus trichocarpa]
Length = 434
Score = 92.8 bits (229), Expect = 4e-17
Identities = 39/60 (65%), Positives = 47/60 (78%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGGNNRNR 215
CICLAKY +N+ELRELPC HFFHK CVDKWLKINA CPLCK+E+ ++ + G N+ R
Sbjct: 360 CICLAKYANNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEVGESILGSLPGLNSSQR 419
>emb|CBI20932.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 92.8 bits (229), Expect = 4e-17
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSG 233
CICLAKY +N+ELRELPC HFFHK CVDKWLKINALCPLCK E+ ++ + SG
Sbjct: 344 CICLAKYANNDELRELPCSHFFHKECVDKWLKINALCPLCKREVGESFLGSLSG 397
>gb|AFK45443.1| unknown [Lotus japonicus]
Length = 145
Score = 92.4 bits (228), Expect = 5e-17
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSG 233
CICLA Y +N+ELRELPC HFFHK CVDKWLKINA CPLCK+EI + + T SG
Sbjct: 86 CICLATYENNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEIGENVTGTVSG 139
>ref|XP_004954169.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Setaria
italica]
Length = 406
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDTASSTTSGGNNRN 218
CICLAKY N+ELRELPC H FHK CVDKWLKINALCPLCK+EI ++S++ + + +N
Sbjct: 338 CICLAKYAHNDELRELPCSHCFHKDCVDKWLKINALCPLCKSEIASSSSTSDTRQSEQN 396
>ref|XP_004291419.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Fragaria
vesca subsp. vesca]
Length = 430
Score = 91.7 bits (226), Expect = 9e-17
Identities = 41/70 (58%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
Frame = -2
Query: 394 CICLAKYLDNEELRELPCRHFFHKGCVDKWLKINALCPLCKTEIEDT---ASSTTSGGNN 224
CICLAKY +N+ELRELPC HFFHK CVDKWLKINA CPLCK+E+ ++ + S+ +G
Sbjct: 354 CICLAKYANNDELRELPCSHFFHKECVDKWLKINASCPLCKSEVGESLLGSLSSLNGSQQ 413
Query: 223 RNRWMAGSSV 194
R+ G+ V
Sbjct: 414 RSDSRVGNEV 423