BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00008074
         (2389 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v...   931   0.0  
ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform ...   930   0.0  
ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza b...   925   0.0  
ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [S...   925   0.0  
ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group] g...   920   0.0  
gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indi...   919   0.0  
gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma ca...   917   0.0  
ref|XP_004972820.1| PREDICTED: DNA topoisomerase 1-like isoform ...   914   0.0  
emb|CBI28783.3| unnamed protein product [Vitis vinifera]              914   0.0  
ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|A...   910   0.0  
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr...   909   0.0  
ref|XP_002317355.1| DNA topoisomerase family protein [Populus tr...   905   0.0  
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                 904   0.0  
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ...   902   0.0  
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr...   900   0.0  
gb|EMJ02410.1| hypothetical protein PRUPE_ppa001622mg [Prunus pe...   900   0.0  
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]               899   0.0  
gb|EMT20272.1| DNA topoisomerase 1 [Aegilops tauschii]                898   0.0  
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]                898   0.0  
ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife...   897   0.0  

>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 883

 Score =  931 bits (2406), Expect = 0.0
 Identities = 476/684 (69%), Positives = 522/684 (76%), Gaps = 8/684 (1%)
 Frame = +2

Query: 11   NGSGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKE 190
            NG  KK  +    +P+   KRP    N +  SS KK KL   SV  K KQ VS K E K+
Sbjct: 209  NGISKKD-DERVKSPKGQNKRPLGQANTSHHSSSKKPKLLDGSVKGKVKQ-VSVKAEQKD 266

Query: 191  DDNND------HIPIAQRIKSP--SSNCGSINKNILHKTTXXXXXXXXXXXXXXXXXXXX 346
            DD++D      + P  +R+K    S N  +    ++  +                     
Sbjct: 267  DDDDDNDDDDEYTPTVKRLKKSVSSDNKKASKTKVIPSSRKKATKKAKKSKKLAKSSKYS 326

Query: 347  XXXXTPPGSGGGQKWTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMK 526
                 PP SG GQKWTTL HNGVIFPPPYKPHG+KMLY G+PV+LTPEQEEVATMFAVMK
Sbjct: 327  KSTKVPPNSGEGQKWTTLEHNGVIFPPPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMK 386

Query: 527  DTDYAQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXX 706
            DTDYA K +FIENFM+DWR+ LGKNH+IKKFE CDFTPIYEWH +EKEKKKQMT      
Sbjct: 387  DTDYATKPRFIENFMNDWRVRLGKNHVIKKFELCDFTPIYEWHEKEKEKKKQMTTEEKKA 446

Query: 707  XXXXXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINI 886
                       YMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI P DITINI
Sbjct: 447  LKEEKLKQEDKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRICPSDITINI 506

Query: 887  GKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKY 1066
            GK+AP+PECPIPGERWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKY
Sbjct: 507  GKEAPVPECPIPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKY 566

Query: 1067 EKARLLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 1246
            EKARLLKDYIQNIR  YT+DF +KD  KRQIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 567  EKARLLKDYIQNIRATYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 626

Query: 1247 TLKVENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXX 1426
            TLKVENV LVPPNKL+FDFLGKDSIRY NTVEVE  VYKAIG F+  K            
Sbjct: 627  TLKVENVALVPPNKLEFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGG-------DD 679

Query: 1427 XXXXXXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANK 1606
                  TSKLNAHLKELMPGLTAKVFRTYNASITLD +LN+E + G   EKI +YQHANK
Sbjct: 680  LFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNREARGGDAMEKIVIYQHANK 739

Query: 1607 EVAIICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKK 1786
            EVAIICNHQRSVSKSH+ QMS+L+EK+ +L    DEL  DL+RAKKGKPPLKD +GKPKK
Sbjct: 740  EVAIICNHQRSVSKSHDVQMSRLSEKMRELQGVLDELKTDLARAKKGKPPLKDSDGKPKK 799

Query: 1787 NLAPEVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPI 1966
            N+ PEV+E+KIAQ + KI KME D + KEDLKTVALGTSKINYLDPRISVAWCKR EVPI
Sbjct: 800  NMTPEVLERKIAQTNTKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPI 859

Query: 1967 EKIFNKSLLAKFAWAMDVDPDFRF 2038
            EKIFNKSLLAKFAWAMDVDP FRF
Sbjct: 860  EKIFNKSLLAKFAWAMDVDPSFRF 883


>ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform X3 [Setaria italica]
          Length = 903

 Score =  930 bits (2403), Expect = 0.0
 Identities = 471/680 (69%), Positives = 535/680 (78%), Gaps = 6/680 (0%)
 Frame = +2

Query: 17   SGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKEDD 196
            S  KG N++++ PR   KRP  ++N T S ++KKAK S  S S   K+E+         D
Sbjct: 239  SSSKGLNNDSNGPRNLGKRPLDNSNQT-SLALKKAKPSNVSASASVKREIKA-------D 290

Query: 197  NNDHIPIAQRIKSPSSNCGSIN-KNILHKTTXXXXXXXXXXXXXXXXXXXXXXXXT---- 361
            +ND+ P+AQR+K   S+ G  + KN++ K+                         +    
Sbjct: 291  DNDNTPLAQRLKIGESSKGKPSAKNVVKKSPASMKKGIKKMKGKVKTKMMKNSQFSKTMK 350

Query: 362  -PPGSGGGQKWTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTDY 538
             PPGSGGG+KWTTL HNGVIFPPPYKPHG+KMLY GQPV+LTPEQEEVATMFAVMKDTDY
Sbjct: 351  VPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDY 410

Query: 539  AQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXXX 718
            A K  FIENF  DWR +LGKNH+IKKFE CDFTPIYEWHL EKEKKKQMT          
Sbjct: 411  AGKPTFIENFFTDWRTLLGKNHVIKKFELCDFTPIYEWHLREKEKKKQMTTEEKKALREE 470

Query: 719  XXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKDA 898
                   YMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIG+DA
Sbjct: 471  KLKQEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIKPSDITINIGEDA 530

Query: 899  PIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR 1078
            P+PECPIPGERWKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASSSLKGQSDKEKYEK+R
Sbjct: 531  PVPECPIPGERWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSSLKGQSDKEKYEKSR 590

Query: 1079 LLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 1258
             LK YIQ+IR NYT+DF SKD  KRQIAVATYLIDKLALRAGNEKD+DEADTVGCCTLKV
Sbjct: 591  KLKGYIQDIRDNYTKDFRSKDVAKRQIAVATYLIDKLALRAGNEKDEDEADTVGCCTLKV 650

Query: 1259 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXX 1438
            +NV  +PPNK++FDFLGKDSIRY NTVEVE  VYKAI  F+  KK               
Sbjct: 651  DNVTCLPPNKIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPG-------KDLFDQ 703

Query: 1439 XXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAI 1618
              T++LNAHLK+LMPGLTAKVFRTYNASITLD IL+KET+DG++ EKI VYQ ANKEVAI
Sbjct: 704  LDTTRLNAHLKDLMPGLTAKVFRTYNASITLDGILHKETEDGTLLEKIAVYQRANKEVAI 763

Query: 1619 ICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAP 1798
            ICNHQRSVSKSHE+QM++LNE+I+DL +QRDEL +DLS+AKKGKP   DKEGK K+NLAP
Sbjct: 764  ICNHQRSVSKSHESQMTRLNERIDDLKAQRDELKVDLSKAKKGKPLGYDKEGKQKRNLAP 823

Query: 1799 EVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIF 1978
            + IEKKIA ++ KI KMEM+K+ KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIF
Sbjct: 824  DAIEKKIAAIETKIEKMEMEKKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 883

Query: 1979 NKSLLAKFAWAMDVDPDFRF 2038
            NKSL+AKF WAMDVDP+FRF
Sbjct: 884  NKSLVAKFGWAMDVDPEFRF 903


>ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza brachyantha]
          Length = 911

 Score =  925 bits (2391), Expect = 0.0
 Identities = 474/677 (70%), Positives = 532/677 (78%), Gaps = 3/677 (0%)
 Frame = +2

Query: 17   SGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKEDD 196
            S  K +N++T+  R   KRP  D N    S++KKA+ S  SVS       S K+E K DD
Sbjct: 250  SSSKVSNNDTNTSRNSIKRP-IDNNNQSISALKKARPSDVSVSA------SVKRESKADD 302

Query: 197  NNDHIPIAQRIK-SPSSNCGSINKNILHK--TTXXXXXXXXXXXXXXXXXXXXXXXXTPP 367
            N D+IP++QR+K   SS      KNI+ K  ++                         PP
Sbjct: 303  N-DNIPLSQRLKMGESSKSKPPAKNIVKKNPSSFKKDSKKMKTKKTMKNSQFSKTMKVPP 361

Query: 368  GSGGGQKWTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTDYAQK 547
            GSGGGQKWTTLVHNGVIFPPPYKPHG+KMLY GQPV+LTPEQEEVATMF+VMKDTDYA K
Sbjct: 362  GSGGGQKWTTLVHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFSVMKDTDYASK 421

Query: 548  KQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXXXXXX 727
            + FI+NF  DWR ILGKNHIIKKFE CDFTPIYEWHL EKEKKKQMT+            
Sbjct: 422  QTFIDNFFTDWRKILGKNHIIKKFELCDFTPIYEWHLREKEKKKQMTSEEKKAVKEEKLK 481

Query: 728  XXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKDAPIP 907
                YMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIGK APIP
Sbjct: 482  QEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIQPSDITINIGKGAPIP 541

Query: 908  ECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLK 1087
            ECPIPGE WKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASS+LKGQSDKEKYEK+R LK
Sbjct: 542  ECPIPGESWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRKLK 601

Query: 1088 DYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV 1267
             +I  IR  YT+DF SKD TK+QIAVATYLIDKLALRAGNEKDDDEA+TVGCCTLKV+NV
Sbjct: 602  HHIHKIRDTYTKDFRSKDKTKKQIAVATYLIDKLALRAGNEKDDDEAETVGCCTLKVDNV 661

Query: 1268 ELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXXT 1447
              VPPN L+FDFLGKDSIRY NTVEVE  VYKAI +F+  KK                 T
Sbjct: 662  TCVPPNNLQFDFLGKDSIRYFNTVEVELPVYKAIEEFRAGKKPG-------DDLFDKLDT 714

Query: 1448 SKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICN 1627
            ++LNAHLK+LMPGLTAKVFRTYNASITLD IL+KET+DG++ EKI VYQ ANKEVAIICN
Sbjct: 715  TRLNAHLKDLMPGLTAKVFRTYNASITLDDILHKETEDGTLLEKIAVYQRANKEVAIICN 774

Query: 1628 HQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVI 1807
            HQRSVSKSH++QM++LNEKI++L +QRDEL  DLS+ KKGK    DK+GKPK+NLAPE  
Sbjct: 775  HQRSVSKSHDSQMTRLNEKIDELKAQRDELKADLSKVKKGKSLGYDKDGKPKRNLAPEAF 834

Query: 1808 EKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKS 1987
            EKKI+QV+ KI KMEMDK+IKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKS
Sbjct: 835  EKKISQVETKIEKMEMDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKS 894

Query: 1988 LLAKFAWAMDVDPDFRF 2038
            L+AKF+WAMDVDPDFRF
Sbjct: 895  LIAKFSWAMDVDPDFRF 911


>ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [Sorghum bicolor]
            gi|241940222|gb|EES13367.1| hypothetical protein
            SORBIDRAFT_07g003610 [Sorghum bicolor]
          Length = 921

 Score =  925 bits (2390), Expect = 0.0
 Identities = 473/680 (69%), Positives = 525/680 (77%), Gaps = 6/680 (0%)
 Frame = +2

Query: 17   SGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKEDD 196
            S  KG NS+T+  R   KRP  ++N T S +IKKAK S  S S   K+E+ T       D
Sbjct: 257  SSSKGLNSDTNGQRSLGKRPLDNSNQT-SLAIKKAKPSNVSASASVKREIKT-------D 308

Query: 197  NNDHIPIAQRIKSPSSNCGS------INKNILHKTTXXXXXXXXXXXXXXXXXXXXXXXX 358
            +ND+ P+AQR+K   S+ G       + K+                              
Sbjct: 309  DNDNTPLAQRLKMGESSKGKPPAKSIVKKSPASAKDIKKLKGKGKLKKNMKNSQFSKTMR 368

Query: 359  TPPGSGGGQKWTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTDY 538
             PPGSG G+KWTTL HNGVIFPPPYKPHG+KMLY GQPV+LTPEQEEVATMFAVMKDTDY
Sbjct: 369  VPPGSGEGKKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDY 428

Query: 539  AQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXXX 718
            A K  FI+NF  DWR ILGKNHIIKKFE CDFTPIYEWHL EKEKKKQMT          
Sbjct: 429  AGKPTFIDNFFTDWRKILGKNHIIKKFELCDFTPIYEWHLREKEKKKQMTTEEKKALREE 488

Query: 719  XXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKDA 898
                   YMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIGK A
Sbjct: 489  KLKQEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIQPSDITINIGKGA 548

Query: 899  PIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR 1078
            P+PECPIPGE WKE+KHDNTVTWLAFWNDPI+ K+FKYVFLAASSSLKGQSDKEKYEK+R
Sbjct: 549  PVPECPIPGESWKEIKHDNTVTWLAFWNDPISQKDFKYVFLAASSSLKGQSDKEKYEKSR 608

Query: 1079 LLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 1258
             LK +IQ IR NYT+DF +KD T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV
Sbjct: 609  KLKGHIQRIRENYTKDFKNKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 668

Query: 1259 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXX 1438
            +NV  +PPNK++FDFLGKDSIRY NTVEVE  VYKAI  F+  KK               
Sbjct: 669  DNVTCMPPNKIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPG-------EGLFDK 721

Query: 1439 XXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAI 1618
              T++LNAHLK+LMPGLTAKVFRTYNASITLD IL++ET+DG++ EKI VYQ ANKEVAI
Sbjct: 722  IDTTRLNAHLKDLMPGLTAKVFRTYNASITLDGILHEETEDGTLLEKIAVYQRANKEVAI 781

Query: 1619 ICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAP 1798
            ICNHQRSVSKSHE+QM KLNEKI++L SQ +EL  DLS+AKKGKP   DKEGK K+NLAP
Sbjct: 782  ICNHQRSVSKSHESQMIKLNEKIDELKSQMEELKADLSKAKKGKPLGYDKEGKQKRNLAP 841

Query: 1799 EVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIF 1978
            E IEKKIA V+ KI KMEMDK+IKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIF
Sbjct: 842  EAIEKKIAMVEGKIDKMEMDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 901

Query: 1979 NKSLLAKFAWAMDVDPDFRF 2038
            NKSL+AKF WAMDVDPDFRF
Sbjct: 902  NKSLIAKFGWAMDVDPDFRF 921


>ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group]
            gi|27817923|dbj|BAC55688.1| putative DNA topoisomerase I
            [Oryza sativa Japonica Group]
            gi|113622984|dbj|BAF22929.1| Os08g0154600 [Oryza sativa
            Japonica Group] gi|222639933|gb|EEE68065.1| hypothetical
            protein OsJ_26075 [Oryza sativa Japonica Group]
          Length = 916

 Score =  920 bits (2378), Expect = 0.0
 Identities = 470/681 (69%), Positives = 532/681 (78%), Gaps = 7/681 (1%)
 Frame = +2

Query: 17   SGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKEDD 196
            S  K +N++ S  R   KRP  + N T SS++KKA+ S  S S       S K+E K DD
Sbjct: 251  SSSKMSNNDASTSRNSIKRPIDNNNQT-SSALKKARPSDVSASA------SVKREPKADD 303

Query: 197  NNDHIPIAQRIK-SPSSNCGSINKNILHKTTXXXXXXXXXXXXXXXXXXXXXXXX----- 358
            N D++P++QR+K   SS      KNI+ K+                              
Sbjct: 304  N-DNVPLSQRLKMGESSKSKPPAKNIVKKSPSSLKKDNKKMKMKMKTKKTMKNSQFSKTM 362

Query: 359  -TPPGSGGGQKWTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTD 535
              PPGSGGGQKWTTLVH+GVIFPPPYKPHG+KMLY GQPV+LTPEQEEVATMFAVMKDTD
Sbjct: 363  KVPPGSGGGQKWTTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTD 422

Query: 536  YAQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXX 715
            YA K+ FI+NF  DWR ILGKNH+IKKFE CDFTPIYEWHL EKEKKKQMT+        
Sbjct: 423  YASKQTFIDNFFTDWRKILGKNHVIKKFELCDFTPIYEWHLREKEKKKQMTSEEKKALKE 482

Query: 716  XXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKD 895
                    YMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIGK 
Sbjct: 483  EKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIKPSDITINIGKG 542

Query: 896  APIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKA 1075
            APIPECPIPGE WKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASS+LKGQSDKEKYEK+
Sbjct: 543  APIPECPIPGESWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKS 602

Query: 1076 RLLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLK 1255
            R LK ++  IR  YT+DF SKD TK+QIAVATYLIDKLALRAGNEKD+DEA+TVGCCTLK
Sbjct: 603  RKLKHHVHKIRDTYTKDFRSKDKTKKQIAVATYLIDKLALRAGNEKDEDEAETVGCCTLK 662

Query: 1256 VENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXX 1435
            V+NV  VPPNKL+FDFLGKDSIRY NTVEVE  VYKAI +F+  KK              
Sbjct: 663  VDNVTCVPPNKLQFDFLGKDSIRYFNTVEVELLVYKAIEEFRAGKKPG-------QDLFD 715

Query: 1436 XXXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVA 1615
               T++LNAHLK+LMPGLTAKVFRTYNASITLD IL+KET+DG++ EKI VYQ ANKEVA
Sbjct: 716  KLDTTRLNAHLKDLMPGLTAKVFRTYNASITLDDILHKETEDGTLLEKIAVYQRANKEVA 775

Query: 1616 IICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLA 1795
            IICNHQRSVSKSH++QM++LNEKI++L +QRDEL  DLS+ +KGK    DK+GKPK+NLA
Sbjct: 776  IICNHQRSVSKSHDSQMTRLNEKIDELKAQRDELKADLSKVRKGKNLGNDKDGKPKRNLA 835

Query: 1796 PEVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKI 1975
            PE  EKKI+Q++ KI KMEMDK+IKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKI
Sbjct: 836  PEAFEKKISQIETKIEKMEMDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 895

Query: 1976 FNKSLLAKFAWAMDVDPDFRF 2038
            FNKSL+AKF+WAMDVDPDFRF
Sbjct: 896  FNKSLIAKFSWAMDVDPDFRF 916


>gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indica Group]
          Length = 916

 Score =  919 bits (2374), Expect = 0.0
 Identities = 469/681 (68%), Positives = 532/681 (78%), Gaps = 7/681 (1%)
 Frame = +2

Query: 17   SGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKEDD 196
            S  K +N++ S  R   KRP  + N T SS++KKA+ S  S S       S K+E K DD
Sbjct: 251  SSSKMSNNDASTSRNSIKRPIDNNNQT-SSALKKARPSDVSASA------SVKREPKADD 303

Query: 197  NNDHIPIAQRIK-SPSSNCGSINKNILHKTTXXXXXXXXXXXXXXXXXXXXXXXX----- 358
            N D++P++QR+K   SS      KNI+ K+                              
Sbjct: 304  N-DNVPLSQRLKMGESSKSKPPAKNIVKKSPSSLKKDNKKMKMKLKTKKTMKNSQFSKTM 362

Query: 359  -TPPGSGGGQKWTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTD 535
              PPGSGGGQKWTTLVH+GVIFPPPYKPHG+K+LY GQPV+LTPEQEEVATMFAVMKDTD
Sbjct: 363  KVPPGSGGGQKWTTLVHSGVIFPPPYKPHGVKILYNGQPVDLTPEQEEVATMFAVMKDTD 422

Query: 536  YAQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXX 715
            YA K+ FI+NF  DWR ILGKNH+IKKFE CDFTPIYEWHL EKEKKKQMT+        
Sbjct: 423  YASKQTFIDNFFTDWRKILGKNHVIKKFELCDFTPIYEWHLREKEKKKQMTSEEKKALKE 482

Query: 716  XXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKD 895
                    YMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIGK 
Sbjct: 483  EKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIKPSDITINIGKG 542

Query: 896  APIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKA 1075
            APIPECPIPGE WKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASS+LKGQSDKEKYEK+
Sbjct: 543  APIPECPIPGESWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKS 602

Query: 1076 RLLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLK 1255
            R LK ++  IR  YT+DF SKD TK+QIAVATYLIDKLALRAGNEKD+DEA+TVGCCTLK
Sbjct: 603  RKLKHHVHKIRDTYTKDFRSKDKTKKQIAVATYLIDKLALRAGNEKDEDEAETVGCCTLK 662

Query: 1256 VENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXX 1435
            V+NV  VPPNKL+FDFLGKDSIRY NTVEVE  VYKAI +F+  KK              
Sbjct: 663  VDNVTCVPPNKLQFDFLGKDSIRYFNTVEVELLVYKAIEEFRAGKKPG-------QDLFD 715

Query: 1436 XXXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVA 1615
               T++LNAHLK+LMPGLTAKVFRTYNASITLD IL+KET+DG++ EKI VYQ ANKEVA
Sbjct: 716  KLDTTRLNAHLKDLMPGLTAKVFRTYNASITLDDILHKETEDGTLLEKIAVYQRANKEVA 775

Query: 1616 IICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLA 1795
            IICNHQRSVSKSH++QM++LNEKI++L +QRDEL  DLS+ +KGK    DK+GKPK+NLA
Sbjct: 776  IICNHQRSVSKSHDSQMTRLNEKIDELKAQRDELKADLSKVRKGKNLGNDKDGKPKRNLA 835

Query: 1796 PEVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKI 1975
            PE  EKKI+Q++ KI KMEMDK+IKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKI
Sbjct: 836  PEAFEKKISQIETKIEKMEMDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 895

Query: 1976 FNKSLLAKFAWAMDVDPDFRF 2038
            FNKSL+AKF+WAMDVDPDFRF
Sbjct: 896  FNKSLIAKFSWAMDVDPDFRF 916


>gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
            gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha
            isoform 1 [Theobroma cacao]
          Length = 904

 Score =  917 bits (2371), Expect = 0.0
 Identities = 469/680 (68%), Positives = 518/680 (76%), Gaps = 4/680 (0%)
 Frame = +2

Query: 11   NGSGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKE 190
            NGS  KG    +S   +  KRP    N ++ SS KK K S    ++K KQ   T K  K 
Sbjct: 236  NGSIMKGKQQNSST--LSGKRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQV--TVKAEKA 291

Query: 191  DDNNDHIPIAQRIK---SPSSNCGSINKNILHKTTXXXXXXXXXXXXXXXXXXXXXXXXT 361
            D+++DH+PIAQR+K   + +S   S+ +      +                         
Sbjct: 292  DEDDDHMPIAQRMKKSTASNSKLSSMKQKTTKVVSSSFKKINKKSKKEMKSSKYIKSTKV 351

Query: 362  PPGSGGGQK-WTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTDY 538
            PP SG GQK W+TLVHNGVIFP PY PHG+KMLY G+PV+LTPEQEEVATMFAVMKDTDY
Sbjct: 352  PPSSGDGQKKWSTLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMKDTDY 411

Query: 539  AQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXXX 718
              K QF +NF  DW  +LGKNH IK  + CDFTPIYEWHL+EKEKKKQM++         
Sbjct: 412  MSKTQFKKNFWEDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSSEEKKALKEE 471

Query: 719  XXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKDA 898
                   +MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRP DITINIGKDA
Sbjct: 472  KLKQEEKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDA 531

Query: 899  PIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR 1078
            PIPECPIPGERWK++KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR
Sbjct: 532  PIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR 591

Query: 1079 LLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 1258
            +LKDYI+NIR  YT+DF +KD  KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV
Sbjct: 592  MLKDYIKNIRAAYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 651

Query: 1259 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXX 1438
             NVE +PPNKLKFDFLGKDSI+Y+NTVEVE  VYKAIG FQ  K  +             
Sbjct: 652  GNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKS-------DDLFDK 704

Query: 1439 XXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAI 1618
              TSKLNAHLKELMPGLTAKVFRTYNASITLD +LNKETKDG V EK+ VYQ ANKEVAI
Sbjct: 705  LDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKETKDGDVAEKVVVYQRANKEVAI 764

Query: 1619 ICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAP 1798
            ICNHQRS+SKSH  QMS+L EKI +L     EL +DL RAKKGKPPLKD +GK K+NL P
Sbjct: 765  ICNHQRSISKSHSAQMSRLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKRNLTP 824

Query: 1799 EVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIF 1978
            + I+KKI Q +AKI KME D Q KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIF
Sbjct: 825  QAIQKKIDQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 884

Query: 1979 NKSLLAKFAWAMDVDPDFRF 2038
            NKSLLAKFAWAMDVDPDFRF
Sbjct: 885  NKSLLAKFAWAMDVDPDFRF 904


>ref|XP_004972820.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Setaria italica]
          Length = 932

 Score =  914 bits (2363), Expect = 0.0
 Identities = 471/709 (66%), Positives = 535/709 (75%), Gaps = 35/709 (4%)
 Frame = +2

Query: 17   SGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKEDD 196
            S  KG N++++ PR   KRP  ++N T S ++KKAK S  S S   K+E+         D
Sbjct: 239  SSSKGLNNDSNGPRNLGKRPLDNSNQT-SLALKKAKPSNVSASASVKREIKA-------D 290

Query: 197  NNDHIPIAQRIKSPSSNCGSIN-KNILHKTTXXXXXXXXXXXXXXXXXXXXXXXXT---- 361
            +ND+ P+AQR+K   S+ G  + KN++ K+                         +    
Sbjct: 291  DNDNTPLAQRLKIGESSKGKPSAKNVVKKSPASMKKGIKKMKGKVKTKMMKNSQFSKTMK 350

Query: 362  -PPGSGGGQKWTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTDY 538
             PPGSGGG+KWTTL HNGVIFPPPYKPHG+KMLY GQPV+LTPEQEEVATMFAVMKDTDY
Sbjct: 351  VPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTDY 410

Query: 539  AQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXXX 718
            A K  FIENF  DWR +LGKNH+IKKFE CDFTPIYEWHL EKEKKKQMT          
Sbjct: 411  AGKPTFIENFFTDWRTLLGKNHVIKKFELCDFTPIYEWHLREKEKKKQMTTEEKKALREE 470

Query: 719  XXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKDA 898
                   YMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIG+DA
Sbjct: 471  KLKQEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIKPSDITINIGEDA 530

Query: 899  PIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR 1078
            P+PECPIPGERWKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASSSLKGQSDKEKYEK+R
Sbjct: 531  PVPECPIPGERWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSSLKGQSDKEKYEKSR 590

Query: 1079 LLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 1258
             LK YIQ+IR NYT+DF SKD  KRQIAVATYLIDKLALRAGNEKD+DEADTVGCCTLKV
Sbjct: 591  KLKGYIQDIRDNYTKDFRSKDVAKRQIAVATYLIDKLALRAGNEKDEDEADTVGCCTLKV 650

Query: 1259 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXX 1438
            +NV  +PPNK++FDFLGKDSIRY NTVEVE  VYKAI  F+  KK               
Sbjct: 651  DNVTCLPPNKIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPGKDLFDQLD----- 705

Query: 1439 XXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAI 1618
              T++LNAHLK+LMPGLTAKVFRTYNASITLD IL+KET+DG++ EKI VYQ ANKEVAI
Sbjct: 706  --TTRLNAHLKDLMPGLTAKVFRTYNASITLDGILHKETEDGTLLEKIAVYQRANKEVAI 763

Query: 1619 ICNHQRSVSKSHENQMSKLNEKINDLT-----------------------------SQRD 1711
            ICNHQRSVSKSHE+QM++LNE+I+DL                              +QRD
Sbjct: 764  ICNHQRSVSKSHESQMTRLNERIDDLKVGFLPQVINSCFYHGFFLEVFSIIFFLLQAQRD 823

Query: 1712 ELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKKIAQVDAKIGKMEMDKQIKEDLKTVA 1891
            EL +DLS+AKKGKP   DKEGK K+NLAP+ IEKKIA ++ KI KMEM+K+ KEDLKTVA
Sbjct: 824  ELKVDLSKAKKGKPLGYDKEGKQKRNLAPDAIEKKIAAIETKIEKMEMEKKTKEDLKTVA 883

Query: 1892 LGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 2038
            LGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSL+AKF WAMDVDP+FRF
Sbjct: 884  LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLVAKFGWAMDVDPEFRF 932


>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  914 bits (2362), Expect = 0.0
 Identities = 462/671 (68%), Positives = 513/671 (76%), Gaps = 3/671 (0%)
 Frame = +2

Query: 35   NSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKEDDNNDHIP 214
            +SE   P + + +  S    + S  +    LS  + S    Q+     +   DD+ D IP
Sbjct: 61   DSEDEIPLLLKLQLKSRKGASSSKLLDSKGLSSPASSRPQSQKAKVNNKNLSDDSEDEIP 120

Query: 215  IAQ--RIKSPSSNCGSINKN-ILHKTTXXXXXXXXXXXXXXXXXXXXXXXXTPPGSGGGQ 385
            ++   R+K+ SS+    +K  ++  +                          PP SG GQ
Sbjct: 121  LSSKFRLKTVSSDNKKASKTKVIPSSRKKATKKAKKSKKLAKSSKYSKSTKVPPNSGEGQ 180

Query: 386  KWTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTDYAQKKQFIEN 565
            KWTTL HNGVIFPPPYKPHG+KMLY G+PV+LTPEQEEVATMFAVMKDTDYA K +FIEN
Sbjct: 181  KWTTLEHNGVIFPPPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMKDTDYATKPRFIEN 240

Query: 566  FMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXXXXXXXXXXYM 745
            FM+DWR+ LGKNH+IKKFE CDFTPIYEWH +EKEKKKQMT                 YM
Sbjct: 241  FMNDWRVRLGKNHVIKKFELCDFTPIYEWHEKEKEKKKQMTTEEKKALKEEKLKQEDKYM 300

Query: 746  WAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKDAPIPECPIPG 925
            WA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI P DITINIGK+AP+PECPIPG
Sbjct: 301  WAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRICPSDITINIGKEAPVPECPIPG 360

Query: 926  ERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNI 1105
            ERWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNI
Sbjct: 361  ERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNI 420

Query: 1106 RRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELVPPN 1285
            R  YT+DF +KD  KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV LVPPN
Sbjct: 421  RATYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPN 480

Query: 1286 KLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXXTSKLNAH 1465
            KL+FDFLGKDSIRY NTVEVE  VYKAIG F+  K                  TSKLNAH
Sbjct: 481  KLEFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGG-------DDLFDKLDTSKLNAH 533

Query: 1466 LKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQRSVS 1645
            LKELMPGLTAKVFRTYNASITLD +LN+E + G   EKI +YQHANKEVAIICNHQRSVS
Sbjct: 534  LKELMPGLTAKVFRTYNASITLDEMLNREARGGDAMEKIVIYQHANKEVAIICNHQRSVS 593

Query: 1646 KSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPEVIEKKIAQ 1825
            KSH+ QMS+L+EK+ +L    DEL  DL+RAKKGKPPLKD +GKPKKN+ PEV+E+KIAQ
Sbjct: 594  KSHDVQMSRLSEKMRELQGVLDELKTDLARAKKGKPPLKDSDGKPKKNMTPEVLERKIAQ 653

Query: 1826 VDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFA 2005
             + KI KME D + KEDLKTVALGTSKINYLDPRISVAWCKR EVPIEKIFNKSLLAKFA
Sbjct: 654  TNTKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIFNKSLLAKFA 713

Query: 2006 WAMDVDPDFRF 2038
            WAMDVDP FRF
Sbjct: 714  WAMDVDPSFRF 724


>ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|ACS44671.1| DNA
            topoisomerase I [Zea mays]
          Length = 904

 Score =  910 bits (2351), Expect = 0.0
 Identities = 464/681 (68%), Positives = 525/681 (77%), Gaps = 7/681 (1%)
 Frame = +2

Query: 17   SGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKEDD 196
            S  KG  S+T+  +   KRP   +N T SS++KKAK S  S S   ++E+ T        
Sbjct: 241  SSSKGLTSDTNGQQSLGKRPLDSSNQT-SSALKKAKPSNVSASAIVRREIKT-------- 291

Query: 197  NNDHIPIAQRIKSPSSNCG-SINKNILHKTTXXXXXXXXXXXXXXXXXXXXXXXX----- 358
             +D+ P+AQR+K   S+ G S  K++  K+                              
Sbjct: 292  -DDNTPLAQRLKMGESSKGKSSAKSVFKKSPVSVKKDIKKMKGKGKLKKNMKNSQFSKIM 350

Query: 359  -TPPGSGGGQKWTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTD 535
              PPGSGGG+KWTTL HNGVIFPPPYKPHG+KMLY G+PV+LTPEQEEVATMFAVMKDTD
Sbjct: 351  KVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGKPVDLTPEQEEVATMFAVMKDTD 410

Query: 536  YAQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXX 715
            YA K  FI+NF  DWR +LGKNHIIK FE CDFTPIYEWHL EKE+KKQMT         
Sbjct: 411  YAAKPTFIDNFFTDWRKVLGKNHIIKNFELCDFTPIYEWHLREKERKKQMTTEEKKTLRE 470

Query: 716  XXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKD 895
                    YMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI P DITINIGK 
Sbjct: 471  DNLKQEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRILPSDITINIGKG 530

Query: 896  APIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKA 1075
            AP+PECPIPGE WKEVKHDNTVTWLAFWNDPINPK+FKYVFLAASSSLKGQSDKEKYEK+
Sbjct: 531  APVPECPIPGESWKEVKHDNTVTWLAFWNDPINPKDFKYVFLAASSSLKGQSDKEKYEKS 590

Query: 1076 RLLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLK 1255
            R LK +IQ IR NYT+DF +KD T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLK
Sbjct: 591  RKLKGHIQRIRENYTKDFKNKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLK 650

Query: 1256 VENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXX 1435
            V+NV  +PPN+++FDFLGKDSIRY NTVEVE  VYKAI  F+  KK              
Sbjct: 651  VDNVTCMPPNQIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPG-------QDLFD 703

Query: 1436 XXXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVA 1615
               TS+LNAHLK+LMPGLTAKVFRTYNASITLD IL++ET+DG+V EKI VYQ ANKEVA
Sbjct: 704  KIDTSRLNAHLKDLMPGLTAKVFRTYNASITLDGILHEETEDGTVLEKIAVYQRANKEVA 763

Query: 1616 IICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLA 1795
            IICN QRSVSKSHE+QM+++NEKI++L SQ +EL  DL++AKKGKP   D EGKPK+NLA
Sbjct: 764  IICNQQRSVSKSHESQMTRMNEKIDELKSQMEELKADLNKAKKGKPLGYDSEGKPKRNLA 823

Query: 1796 PEVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKI 1975
            PE I+KK+A ++ KI KMEMDK+IKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKI
Sbjct: 824  PEAIQKKVATLEGKIEKMEMDKRIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 883

Query: 1976 FNKSLLAKFAWAMDVDPDFRF 2038
            FNKSLLAKF WAMDVDP+FRF
Sbjct: 884  FNKSLLAKFVWAMDVDPEFRF 904


>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222847602|gb|EEE85149.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 877

 Score =  909 bits (2348), Expect = 0.0
 Identities = 468/681 (68%), Positives = 517/681 (75%), Gaps = 4/681 (0%)
 Frame = +2

Query: 8    VNGSGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGK 187
            +NGS K     ++S   V  KRP  +  P+  SS KK KL     + K KQ V+ K E K
Sbjct: 208  LNGSTKNDKQQKSSV--VPTKRPMDNKVPSNHSSAKKPKLLDACTTTKVKQ-VTVKVEQK 264

Query: 188  EDDNNDHIPIAQRIKSPSSNCGSIN---KNILHKTTXXXXXXXXXXXXXXXXXXXXXXXX 358
             DD+ DH+ I+QR+K   S+    +   K +    +                        
Sbjct: 265  ADDD-DHLTISQRMKKADSSANKSSFAKKKVTKVVSSSLKKTTQKNKKQMKNSKYSKSTK 323

Query: 359  TPPGSGGGQK-WTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTD 535
              PGS  GQK WTTLVHNGVIFPPPYKPHG+K+LYKG+P++LTPEQEEVATMFAVMKDTD
Sbjct: 324  VQPGSSDGQKKWTTLVHNGVIFPPPYKPHGVKILYKGKPIDLTPEQEEVATMFAVMKDTD 383

Query: 536  YAQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXX 715
            Y QK QF +NF +DWR +LGKNH+I+K +DCDF PIYEWH +EKEKKKQM+         
Sbjct: 384  YVQKPQFRQNFWNDWRKLLGKNHVIQKLDDCDFNPIYEWHQQEKEKKKQMSTEEKKVLKE 443

Query: 716  XXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKD 895
                    YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DITINIGKD
Sbjct: 444  EKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDITINIGKD 503

Query: 896  APIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKA 1075
            APIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKA
Sbjct: 504  APIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKA 563

Query: 1076 RLLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLK 1255
            R LKDYI NIR  YT+DF SKD TKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLK
Sbjct: 564  RKLKDYIHNIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLK 623

Query: 1256 VENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXX 1435
            V NVE +PPNKLKFDFLGKDSIRY NTVEVE  VYKAIG FQ+AKK              
Sbjct: 624  VANVECIPPNKLKFDFLGKDSIRYENTVEVELPVYKAIGHFQVAKKQT-------DDLFD 676

Query: 1436 XXXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVA 1615
               TSKLNAHLKELMPGLTAKVFRTYNASITLD  L +ET+DG V EKI +Y  ANK+VA
Sbjct: 677  SLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKIVIYNQANKQVA 736

Query: 1616 IICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLA 1795
            IICNHQR++SKSH+ QMS+L EKI +L S   EL  DL RAKKGKPPLK  +GK K++L 
Sbjct: 737  IICNHQRTISKSHDAQMSRLTEKIEELKSTLKELKTDLDRAKKGKPPLKGADGKQKRSLT 796

Query: 1796 PEVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKI 1975
            PE IEKKIA  + KI KMEM  + KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPI+KI
Sbjct: 797  PEAIEKKIATTNQKIEKMEMAMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIDKI 856

Query: 1976 FNKSLLAKFAWAMDVDPDFRF 2038
            FNKSLLAKF WAMDVDP FRF
Sbjct: 857  FNKSLLAKFTWAMDVDPQFRF 877


>ref|XP_002317355.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222860420|gb|EEE97967.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 860

 Score =  905 bits (2340), Expect = 0.0
 Identities = 465/681 (68%), Positives = 517/681 (75%), Gaps = 4/681 (0%)
 Frame = +2

Query: 8    VNGSGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGK 187
            +NGS  K    ++SA  V  KRP  +  P+  S  KK KLS  S +    ++V+ K E K
Sbjct: 194  LNGSTAKDKQQKSSA--VPTKRPMDNKVPSNQSFAKKPKLSDASTT----KQVTVKAELK 247

Query: 188  EDDNNDHIPIAQRIKSPSSNCG---SINKNILHKTTXXXXXXXXXXXXXXXXXXXXXXXX 358
             DD+ DH+ I+QR+K  SS+     S+ +N+    +                        
Sbjct: 248  ADDD-DHLTISQRMKKASSSSNKSLSVKQNVTKVVSFSSKKTTKNNKKQMQNSKYSKSTK 306

Query: 359  TPPGSGGGQK-WTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTD 535
              PGS  GQK W TLVHNGVIFPPPYKPHG+KMLYKG+PV+LTPEQEEVATMFAVMKDT+
Sbjct: 307  VQPGSSDGQKKWKTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMKDTE 366

Query: 536  YAQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXX 715
            Y QK QF++NF +DWR +LGKNH+I+K E CDF PIYEWH +EKEKKKQM+         
Sbjct: 367  YVQKPQFLQNFWNDWRTLLGKNHVIQKLEACDFNPIYEWHQKEKEKKKQMSTEEKKAVRE 426

Query: 716  XXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKD 895
                    YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DITINIGKD
Sbjct: 427  EKLKQEEMYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDITINIGKD 486

Query: 896  APIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKA 1075
            APIP+CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKA
Sbjct: 487  APIPKCPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKA 546

Query: 1076 RLLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLK 1255
            R LKDYI NIR  YT+DF SKD TKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLK
Sbjct: 547  RKLKDYIHNIRTAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLK 606

Query: 1256 VENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXX 1435
            V NVE +PPNKLKFDFLGKDSIRY NTVEVE  VYKAI  FQ+AKK              
Sbjct: 607  VANVECIPPNKLKFDFLGKDSIRYENTVEVELPVYKAIRQFQVAKKPT-------DDLFD 659

Query: 1436 XXXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVA 1615
               TSKLNAHLKELMPGLTAKVFRTYNASITLD  L +ET+DG V EK  +Y  ANK+VA
Sbjct: 660  SLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKFVIYNQANKQVA 719

Query: 1616 IICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLA 1795
            IICNHQR++SKSH+ QMS+L EK+ +L     E   DL RAKKGKPPLKD +GK K+NL 
Sbjct: 720  IICNHQRTISKSHDAQMSRLTEKLEELKGTLKEFKTDLDRAKKGKPPLKDADGKQKRNLT 779

Query: 1796 PEVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKI 1975
            PE IEKKIA  + KI KME+  + KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKI
Sbjct: 780  PEAIEKKIATTNQKIEKMELSMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 839

Query: 1976 FNKSLLAKFAWAMDVDPDFRF 2038
            FNKSLLAKF WAMDVDP FRF
Sbjct: 840  FNKSLLAKFTWAMDVDPQFRF 860


>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score =  904 bits (2335), Expect = 0.0
 Identities = 465/665 (69%), Positives = 509/665 (76%), Gaps = 5/665 (0%)
 Frame = +2

Query: 59   VGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGK-EDDNNDHIPIAQRIK- 232
            +  KRP  D   +   S+KK KLS  +     KQ  S K E K EDD++DH+PI+QRIK 
Sbjct: 254  MSNKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQ-ASVKPEPKAEDDDDDHLPISQRIKK 312

Query: 233  SPSSNCGSIN-KNILHKTTXXXXXXXXXXXXXXXXXXXXXXXXTPPGSGGGQKWTTLVHN 409
            SP+S   S + K      +                         PP SG G+KW  L HN
Sbjct: 313  SPTSESKSSSIKKTTKVVSSSVKKVNKKSKKVMKNSKYSKSSKVPPSSGEGKKWNKLEHN 372

Query: 410  GVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTDYAQKKQFIENFMHDWRLI 589
            GVIFPPPYKPHGIKMLYKG+PV+LTPEQEEVATMFAVM DTDY  K +F ENF  DW+ I
Sbjct: 373  GVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENFFGDWKKI 432

Query: 590  LGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXXXXXXXXXXYMWAIVDGVK 769
            LGKNH+I+  E+CDF+PIYEWH  EKEKKKQMT                 YMWA VDG K
Sbjct: 433  LGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTTEEKKALKEEKLKQEEKYMWAWVDGKK 492

Query: 770  EKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKDAPIPECPIPGERWKEVKH 949
            EKVGNFRVEPPGLFRGRGEHPKMGKLK RIRP DITINIGKDAPIPECP+PGERWKEV+H
Sbjct: 493  EKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGERWKEVRH 552

Query: 950  DNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIRRNYTRDF 1129
            DNTVTWLAFWNDPINPKEFKYVFLAASS+LKG SDKEKYEKARLLKDYIQ IR  YT+DF
Sbjct: 553  DNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIRAAYTKDF 612

Query: 1130 NSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELVPPNKLKFDFLG 1309
             SKDPTK+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVE VPPN LKFDFLG
Sbjct: 613  ASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLG 672

Query: 1310 KDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXXXTSKLNAHLKELMPGL 1489
            KDSIRY N VEVE  V+KAI  F+  K+ +               TSKLNAHLKELMPGL
Sbjct: 673  KDSIRYQNEVEVEAAVFKAIQQFRSGKEGS-------SDLFDLLDTSKLNAHLKELMPGL 725

Query: 1490 TAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAIICNHQRSVSKSHENQMS 1669
            TAKVFRTYNASITLD +L++ETK G V EK+ VYQHANKEVAIICNHQR+VSKSH  QM 
Sbjct: 726  TAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQML 785

Query: 1670 KLNEKINDLTSQRDELMMDLSRAKKGKPPLKDK--EGKPKKNLAPEVIEKKIAQVDAKIG 1843
            +LNEKI +L +  +EL  DLSR KKGKPPLK K  +GKPK+NL PE +EKKIAQ +AKI 
Sbjct: 786  RLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKIE 845

Query: 1844 KMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 2023
            KME DK+ KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKF WAMDVD
Sbjct: 846  KMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVD 905

Query: 2024 PDFRF 2038
            P FRF
Sbjct: 906  PSFRF 910


>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
            gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
            topoisomerase 1-like isoform X2 [Citrus sinensis]
            gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
            topoisomerase 1-like isoform X3 [Citrus sinensis]
            gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
            topoisomerase 1-like isoform X4 [Citrus sinensis]
          Length = 902

 Score =  902 bits (2330), Expect = 0.0
 Identities = 470/681 (69%), Positives = 521/681 (76%), Gaps = 5/681 (0%)
 Frame = +2

Query: 11   NGSGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKE 190
            NGS  + T  ++S+  V  KRP    + + +SS KK K+S TS  VK KQ V+ K E K 
Sbjct: 233  NGSTSRETQQKSSSVPV--KRPLQKASSSGASSAKKPKVSDTSKEVKVKQ-VTVKVEKKA 289

Query: 191  DDNNDHIPIAQRIKSPSSNCGSINKNILHKTTXXXXXXXXXXXXXXXXXXXXXXXXTP-- 364
            DD+ DHIPI+QR+K+ + +      N    T                         +   
Sbjct: 290  DDD-DHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSNKINKKTKKVIKNSQYSKSTKM 348

Query: 365  -PGSGGGQK-WTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTDY 538
             PGSG GQK WTTLVHNGVIFPPPY PHG+KMLYKG+ VNLTPEQEEVATMFAVM DTDY
Sbjct: 349  LPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLDTDY 408

Query: 539  AQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXXX 718
             QK +F ENF +DWR +LGKNH+I+  E CDF PIY+WH E+KEKKKQM++         
Sbjct: 409  MQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKALKEE 468

Query: 719  XXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKDA 898
                   YMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIGKD 
Sbjct: 469  KLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIGKDV 528

Query: 899  PIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR 1078
            PIPECPIPGE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR
Sbjct: 529  PIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR 588

Query: 1079 LLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 1258
             LKDYI +IR  YT+DF S+D T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV
Sbjct: 589  KLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 648

Query: 1259 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXX 1438
             NVE +PPNKLKFDFLGKDSI+Y+NTVEVE  VYKAIG FQ  KK N             
Sbjct: 649  GNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQN-------DDLFDK 701

Query: 1439 XXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAI 1618
              T+KLNAHLKELMPGLTAKVFRTYNASITLD +LNK T DG V  KI VYQ ANKEVAI
Sbjct: 702  LDTAKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAI 761

Query: 1619 ICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPL-KDKEGKPKKNLA 1795
            ICNHQR+VSK+H  QMS+L EKI DL     +L +DL RAKKGKPPL KD +GK K+NLA
Sbjct: 762  ICNHQRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLA 821

Query: 1796 PEVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKI 1975
            PE +E+K+AQ +AKI KME D + KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKI
Sbjct: 822  PEALERKMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 881

Query: 1976 FNKSLLAKFAWAMDVDPDFRF 2038
            FNKSLLAKFAWAMDVDP+FRF
Sbjct: 882  FNKSLLAKFAWAMDVDPEFRF 902


>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
            gi|567920950|ref|XP_006452481.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555705|gb|ESR65719.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555707|gb|ESR65721.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
          Length = 902

 Score =  900 bits (2327), Expect = 0.0
 Identities = 469/681 (68%), Positives = 521/681 (76%), Gaps = 5/681 (0%)
 Frame = +2

Query: 11   NGSGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKE 190
            NGS  + T  ++S+  V  KRP    + + +SS KK K+S TS  VK KQ V+ K E K 
Sbjct: 233  NGSTSRETQQKSSSVPV--KRPLQKASSSGASSAKKPKVSDTSKEVKVKQ-VTVKVEKKA 289

Query: 191  DDNNDHIPIAQRIKSPSSNCGSINKNILHKTTXXXXXXXXXXXXXXXXXXXXXXXXTP-- 364
            DD+ DHIPI+QR+K+ + +      N    T                         +   
Sbjct: 290  DDD-DHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSKSTKM 348

Query: 365  -PGSGGGQK-WTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTDY 538
             PGSG GQK WTTLVHNGVIFPPPY PHG+KMLYKG+ VNLTPEQEEVATMFAVM DTDY
Sbjct: 349  LPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLDTDY 408

Query: 539  AQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXXX 718
             QK +F ENF +DWR +LGKNH+I+  E CDF PIY+WH E+KEKKKQM++         
Sbjct: 409  MQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKALKEE 468

Query: 719  XXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKDA 898
                   YMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI+P DITINIGKD 
Sbjct: 469  KLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIGKDV 528

Query: 899  PIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR 1078
            PIPECPIPGE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD+EKYEKAR
Sbjct: 529  PIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKYEKAR 588

Query: 1079 LLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 1258
             LKDYI +IR  YT+DF S+D T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV
Sbjct: 589  KLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 648

Query: 1259 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXX 1438
             NVE +PPNKLKFDFLGKDSI+Y+NTVEVE  VYKAIG FQ  KK N             
Sbjct: 649  GNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQN-------DDLFDK 701

Query: 1439 XXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAI 1618
              T+KLNAHLKELMPGLTAKVFRTYNASITLD +LNK T DG V  KI VYQ ANKEVAI
Sbjct: 702  LDTAKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAI 761

Query: 1619 ICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPL-KDKEGKPKKNLA 1795
            ICNHQR+VSK+H  QMS+L EKI DL     +L +DL RAKKGKPPL KD +GK K+NLA
Sbjct: 762  ICNHQRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLA 821

Query: 1796 PEVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKI 1975
            PE +E+K+AQ +AKI KME D + KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKI
Sbjct: 822  PEALERKMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 881

Query: 1976 FNKSLLAKFAWAMDVDPDFRF 2038
            FNKSLLAKFAWAMDVDP+FRF
Sbjct: 882  FNKSLLAKFAWAMDVDPEFRF 902


>gb|EMJ02410.1| hypothetical protein PRUPE_ppa001622mg [Prunus persica]
          Length = 790

 Score =  900 bits (2326), Expect = 0.0
 Identities = 463/686 (67%), Positives = 519/686 (75%), Gaps = 7/686 (1%)
 Frame = +2

Query: 2    KAVNGSGKKGTNSETSAPR----VGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVS 169
            K V    +K  +S T   +    +  KRP    N +E SS K+ K+S +S S+K+ Q VS
Sbjct: 113  KPVASKVQKNCSSTTDKGKTSYVISTKRPLDKANISEKSSAKRPKVSDSSTSIKNMQ-VS 171

Query: 170  TKKEGKEDDNNDHIPIAQRIKSPSS-NCGSINKNILHKTTXXXXXXXXXXXXXXXXXXXX 346
             KKE K +D++D IPI+QRIK  +S N   + K  L K                      
Sbjct: 172  AKKEPKGEDDDDFIPISQRIKKATSDNKSPVTKQKLTKVRPSSIKKKIKKGQKASQFSKY 231

Query: 347  XXXXT-PPGSGGGQK-WTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAV 520
                T PP S  GQK WT+LVHNGVIFPPPYKPHG+KMLY G+PV L+PEQEEVATM+AV
Sbjct: 232  SKSTTVPPSSNDGQKKWTSLVHNGVIFPPPYKPHGVKMLYSGKPVTLSPEQEEVATMYAV 291

Query: 521  MKDTDYAQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXX 700
            MKDTDY QK+ F  NF +DW  +LGKNHII+K + CDFTPIY+W+  EKEKKKQM+    
Sbjct: 292  MKDTDYVQKQTFRNNFWNDWHKLLGKNHIIQKLDACDFTPIYDWYQNEKEKKKQMSTEEK 351

Query: 701  XXXXXXXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITI 880
                         YMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPK GKLK RIRP D+TI
Sbjct: 352  KALKEDKLKEEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKSGKLKRRIRPSDVTI 411

Query: 881  NIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKE 1060
            NIGKDAPIPECPIPGE WKEV+HDNTVTWLAFWNDPIN +EFKYVFLA SSSLKGQSDKE
Sbjct: 412  NIGKDAPIPECPIPGESWKEVRHDNTVTWLAFWNDPINQREFKYVFLAPSSSLKGQSDKE 471

Query: 1061 KYEKARLLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVG 1240
            KYEKAR+LKDYI NIR  YTRDF SKD TKRQIAVATYLIDKLALRAGNEKDDDEADTVG
Sbjct: 472  KYEKARMLKDYIGNIRAAYTRDFTSKDGTKRQIAVATYLIDKLALRAGNEKDDDEADTVG 531

Query: 1241 CCTLKVENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXX 1420
            CCTLKVENV+ + PN L+F+FLGKDSIRY NTVEVE  VYKAI  FQ  K+         
Sbjct: 532  CCTLKVENVKAIAPNSLEFNFLGKDSIRYENTVEVEIPVYKAIIQFQTGKRG-------C 584

Query: 1421 XXXXXXXXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHA 1600
                    TSKLNAHLKELMPGLTAKVFRTYNASITLD ILNKETK+G + EK+ VYQHA
Sbjct: 585  DDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDNILNKETKEGDLSEKVVVYQHA 644

Query: 1601 NKEVAIICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKP 1780
            NKEVAIICNHQR++SK+H  QMS+L EKI +L S   EL  DL RAKKG+PPLKD +GK 
Sbjct: 645  NKEVAIICNHQRTISKTHSAQMSRLLEKIGNLQSILKELKTDLDRAKKGRPPLKDADGKQ 704

Query: 1781 KKNLAPEVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEV 1960
            K+NL PE +E+KIAQ   KI KME+D + KEDLKTVALGTSKINYLDPRI+VAWCKRHEV
Sbjct: 705  KRNLTPEALERKIAQTTVKIEKMELDMRTKEDLKTVALGTSKINYLDPRITVAWCKRHEV 764

Query: 1961 PIEKIFNKSLLAKFAWAMDVDPDFRF 2038
            PIEKIFNKSLLAKFAW+MDVDPDFRF
Sbjct: 765  PIEKIFNKSLLAKFAWSMDVDPDFRF 790


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score =  899 bits (2323), Expect = 0.0
 Identities = 463/680 (68%), Positives = 516/680 (75%), Gaps = 4/680 (0%)
 Frame = +2

Query: 11   NGSGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKE 190
            NGS  +G+ S         KRP  +   +  SS+KK KLS  S  V +KQ  S K E K 
Sbjct: 227  NGSINRGSKSSIKV----NKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQ-ASKKAEPKA 281

Query: 191  DDNND-HIPIAQRIK--SPSSNCGSINKNILHKT-TXXXXXXXXXXXXXXXXXXXXXXXX 358
            DD++D H+PI+QR+K  + S N  S  K  + K  +                        
Sbjct: 282  DDSDDDHVPISQRMKKSATSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKKSKYSKSSK 341

Query: 359  TPPGSGGGQKWTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTDY 538
             PP SG G+KW TLVHNGVIFPPPYKPHG+KMLYKG+PV+LTPEQEEVATMFAVM DTDY
Sbjct: 342  VPPSSGEGKKWNTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDY 401

Query: 539  AQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXXX 718
              K +F ENFM DWR ILGKNH+I+  EDCDFTPIYEWH  EKEKKK+MTA         
Sbjct: 402  MTKSKFKENFMDDWRKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAEEKKVLKEE 461

Query: 719  XXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKDA 898
                   YMWAIV+GVKEKVGNFRVEPP LFRGRGEHPKMGKLK  IRP DITINIGKDA
Sbjct: 462  RLKQEEKYMWAIVNGVKEKVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINIGKDA 521

Query: 899  PIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR 1078
            PIPECPIPGE WKE++HDNTVTWLAFWNDPI P+EFKYVFLAASSSLKGQSDKEKYEKAR
Sbjct: 522  PIPECPIPGESWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKYEKAR 581

Query: 1079 LLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 1258
            LLKD+IQ IR  YT+DF SKD TKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV
Sbjct: 582  LLKDFIQGIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 641

Query: 1259 ENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXX 1438
            ENVE  PP+ LKFDFLGKDSIRY N VEVE  VYKAI  F+  K+               
Sbjct: 642  ENVEPKPPSILKFDFLGKDSIRYQNEVEVELPVYKAIQQFRTGKRGG-------DDLFDK 694

Query: 1439 XXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAI 1618
              TSKLNAHLK LMPGLTAKVFRTYNASITLD +L++ETK G+V EKI VYQHANKEVAI
Sbjct: 695  LDTSKLNAHLKGLMPGLTAKVFRTYNASITLDEMLSRETKGGNVAEKIVVYQHANKEVAI 754

Query: 1619 ICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAP 1798
            ICNHQR+VSKSH  QM++LN KI++L    D L  DL+RAKKGKPPL+D +GKPK+NL P
Sbjct: 755  ICNHQRTVSKSHPAQMTRLNGKIDELKGILDGLQTDLARAKKGKPPLEDADGKPKRNLTP 814

Query: 1799 EVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIF 1978
            E +E+KI Q +AKI KME DK+ KE LKT+ALGTSKI+YLDPRI+VAWCKRHEVPIEK+F
Sbjct: 815  EALERKIGQTNAKIEKMERDKETKEGLKTIALGTSKISYLDPRITVAWCKRHEVPIEKVF 874

Query: 1979 NKSLLAKFAWAMDVDPDFRF 2038
            NKSLLAKFAW+MDVDP FRF
Sbjct: 875  NKSLLAKFAWSMDVDPSFRF 894


>gb|EMT20272.1| DNA topoisomerase 1 [Aegilops tauschii]
          Length = 949

 Score =  898 bits (2320), Expect = 0.0
 Identities = 456/679 (67%), Positives = 519/679 (76%), Gaps = 5/679 (0%)
 Frame = +2

Query: 17   SGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQEVSTKKEGKEDD 196
            S  KG +  +SAPR   KRP  + N   SS++KKAK S  S S       S K+E K DD
Sbjct: 285  SNNKGPSINSSAPRNSVKRPSDNNNNQTSSALKKAKSSDASASG------SVKRESKVDD 338

Query: 197  NNDHIPIAQRIK-SPSSNCGSINKNILHKTTXXXXXXXXXXXXXXXXXXXXXXXX----T 361
            NN  +P+ +++    SS      KNI+ K+                              
Sbjct: 339  NNS-VPVERKLTPGESSKSKPPVKNIVKKSPLSVKKDNKKFKTKTKKTMKSSQFSKSLRV 397

Query: 362  PPGSGGGQKWTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATMFAVMKDTDYA 541
            PPGSGGG+KW+TL HNGVIFPPPY PHG+KMLY GQPV LTPE+EEVATMFAVMKDT+YA
Sbjct: 398  PPGSGGGKKWSTLEHNGVIFPPPYNPHGVKMLYNGQPVELTPEEEEVATMFAVMKDTEYA 457

Query: 542  QKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTAXXXXXXXXXX 721
             KK FI+NF  DW+ ILGKNHIIKKFE CDFTPIYEWHL EKEKKKQMT+          
Sbjct: 458  AKKTFIDNFFGDWKKILGKNHIIKKFELCDFTPIYEWHLREKEKKKQMTSEERKALREEK 517

Query: 722  XXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRDITINIGKDAP 901
                  YMWA+VDGV+EKVGNFRVEPPGLFRGRGEHPKMGKLK RIRP DITINIGK  P
Sbjct: 518  LKQEEKYMWAVVDGVREKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGTP 577

Query: 902  IPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARL 1081
            +PECPI GE WKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASSSLKGQSDKEKYEK+R 
Sbjct: 578  VPECPIEGESWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSSLKGQSDKEKYEKSRK 637

Query: 1082 LKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 1261
            LKD+I NIR NYT+DFNSKD +K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV+
Sbjct: 638  LKDHIHNIRVNYTKDFNSKDVSKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVD 697

Query: 1262 NVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXXXXXXXXXXXX 1441
            NV  VPPNKL+FDFLGKDSIRY NTVEVE  VY AI +F+  KK                
Sbjct: 698  NVTCVPPNKLQFDFLGKDSIRYFNTVEVELPVYNAIEEFRTGKKDG-------DAVFDQL 750

Query: 1442 XTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVYQHANKEVAII 1621
             T+KLN HLK+LMPGLTAKVFRTYNASITLD IL++ET+DG++ EKI VYQ ANKEVAII
Sbjct: 751  DTTKLNHHLKDLMPGLTAKVFRTYNASITLDAILHEETEDGTLLEKIAVYQRANKEVAII 810

Query: 1622 CNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKEGKPKKNLAPE 1801
            CNHQR+VSKSH+ QM+KLNEKI++L +Q +EL  DL + K+GKP     +GKPK+ LAPE
Sbjct: 811  CNHQRAVSKSHDTQMTKLNEKIDELKAQINELNKDLGKVKRGKPLGNGADGKPKRALAPE 870

Query: 1802 VIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFN 1981
             IEKKI+Q++ K+ KMEMDK+ KEDLKTVALGTSKINYLDPRI+VAWCK HEVPIEKIF+
Sbjct: 871  AIEKKISQIETKVEKMEMDKKTKEDLKTVALGTSKINYLDPRITVAWCKTHEVPIEKIFS 930

Query: 1982 KSLLAKFAWAMDVDPDFRF 2038
            K++LAKF WAMDV+PDFRF
Sbjct: 931  KTILAKFGWAMDVEPDFRF 949


>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
          Length = 927

 Score =  898 bits (2320), Expect = 0.0
 Identities = 463/705 (65%), Positives = 520/705 (73%), Gaps = 29/705 (4%)
 Frame = +2

Query: 11   NGSGKKGTNSETSAPRVGEKRPHSDTNPTESSSIKKAKLSGTSVSVKDKQ---------- 160
            NGS  +      SA  +  KRP  +      SS+KK KLS    S+ +KQ          
Sbjct: 231  NGSVSRDGPMNKSAS-LSNKRPPGEVKSLNQSSVKKPKLSSPITSISNKQAAVKPEPEPK 289

Query: 161  ------EVSTKKEGKE---------DDNNDHIPIAQRIKSPSSNCGSINKNILHKTTXXX 295
                   +   + GK+         D+++D++PIAQRIK   ++    +  +   +T   
Sbjct: 290  AEDDDDNIPLSQRGKKSQAATSKPKDEDDDNVPIAQRIKKSPASVSKSSAPVKKASTVVS 349

Query: 296  XXXXXXXXXXXXXXXXXXXXXT---PPGSGGGQKWTTLVHNGVIFPPPYKPHGIKMLYKG 466
                                 +   PPGSG GQKWTTLVHNGVIFPPPY PHG+KMLYK 
Sbjct: 350  PSLKKVNKNSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYNPHGVKMLYKR 409

Query: 467  QPVNLTPEQEEVATMFAVMKDTDYAQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIY 646
            QP+ LTPEQEEVATMFAVM DTDY  K +F ENF  DW+ +LGKNH I+  EDCDF PIY
Sbjct: 410  QPITLTPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIY 469

Query: 647  EWHLEEKEKKKQMTAXXXXXXXXXXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGE 826
            EWH +EKEKKKQMT                 YMWAIVDGVKEKVGNFRVEPPGLFRGRGE
Sbjct: 470  EWHQQEKEKKKQMTTEEKKALKEDKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGE 529

Query: 827  HPKMGKLKNRIRPRDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEF 1006
            HPKMGKLK RIRPRDITINIGKDAPIPECPIPGERWKEV++DNTVTWLAFW DPIN KEF
Sbjct: 530  HPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWIDPINQKEF 589

Query: 1007 KYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIRRNYTRDF-NSKDPTKRQIAVATYLID 1183
            KYVFLAASS+LKGQSDKEKYEKARLLKDYI  IR  YT+DF N+KDP K+QIAVATYLID
Sbjct: 590  KYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLID 649

Query: 1184 KLALRAGNEKDDDEADTVGCCTLKVENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYK 1363
            KLALRAGNEKDDDEADTVGCCTLKVENVE VPPN LKFDFLGKDSIRY N V+VEP V+K
Sbjct: 650  KLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFK 709

Query: 1364 AIGDFQIAKKSNXXXXXXXXXXXXXXXTSKLNAHLKELMPGLTAKVFRTYNASITLDVIL 1543
            AI  F+  K+ +               TSKLNAHLKELMPGLTAKVFRTYNASITLD +L
Sbjct: 710  AIQQFRSGKEGSEDLFDRLD-------TSKLNAHLKELMPGLTAKVFRTYNASITLDDML 762

Query: 1544 NKETKDGSVPEKITVYQHANKEVAIICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMM 1723
            +KETK G V EK+ VYQHANKEVAIICNHQR+VSKSH  QMS+LNEKI++L +  +EL  
Sbjct: 763  SKETKGGEVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTAMEELKT 822

Query: 1724 DLSRAKKGKPPLKDKEGKPKKNLAPEVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTS 1903
            DLSR KKGKPP K  +GKPK+NL PE +E+K+AQ++AKI KME DK+ KEDLKTVALGTS
Sbjct: 823  DLSRVKKGKPPSKGADGKPKRNLNPEALERKMAQINAKIEKMERDKETKEDLKTVALGTS 882

Query: 1904 KINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 2038
            KINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKFAW+MDVDP FRF
Sbjct: 883  KINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPSFRF 927


>ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
            gi|296082698|emb|CBI21703.3| unnamed protein product
            [Vitis vinifera]
          Length = 857

 Score =  897 bits (2319), Expect = 0.0
 Identities = 465/689 (67%), Positives = 524/689 (76%), Gaps = 12/689 (1%)
 Frame = +2

Query: 8    VNGSGKKGTNSETSAPRV-GEKRPHSDTNPT--ESSSIKKAKLSGTSVSVKDKQEVSTKK 178
            VN +G  GT+    +P V  +KRP    N +  +SS +KK K+SG S         + K 
Sbjct: 181  VNQNG--GTDKRDKSPTVLNKKRPLDGVNSSLGQSSLVKKPKISGQSAQPFKVTHATAKA 238

Query: 179  EGK-EDDNNDHIPIAQRIKSPSSNCGSINKNILHK--------TTXXXXXXXXXXXXXXX 331
            E K EDD++D +PI+QR+K   ++ G  NK +  K        +T               
Sbjct: 239  EPKVEDDDDDDMPISQRMKKSGASSG--NKPVPAKQKVTKVVSSTSFKKTKDIKSKKMEK 296

Query: 332  XXXXXXXXXTPPGSGGGQKWTTLVHNGVIFPPPYKPHGIKMLYKGQPVNLTPEQEEVATM 511
                      PP SG GQKWTTLVHNGVIFPPPYKPHG+KMLYKG+PV+LTPEQEEVATM
Sbjct: 297  NSKYSKSTKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATM 356

Query: 512  FAVMKDTDYAQKKQFIENFMHDWRLILGKNHIIKKFEDCDFTPIYEWHLEEKEKKKQMTA 691
            FAVM DTDY QK++F ENFM DWR ILGKNH+I++ +DCDFTPIYEWH EEKEKKKQM+ 
Sbjct: 357  FAVMLDTDYMQKEKFKENFMADWRKILGKNHVIQRLDDCDFTPIYEWHQEEKEKKKQMST 416

Query: 692  XXXXXXXXXXXXXXXXYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPRD 871
                            YMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RI P D
Sbjct: 417  EEKKTLKEEKLKLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIHPSD 476

Query: 872  ITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 1051
            ITINIGK++ IPECPIPGE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS
Sbjct: 477  ITINIGKNSQIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 536

Query: 1052 DKEKYEKARLLKDYIQNIRRNYTRDFNSKDPTKRQIAVATYLIDKLALRAGNEKDDDEAD 1231
            DKEKYEKAR LK+YI++IR  YT+DF SKD TKRQIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 537  DKEKYEKARKLKNYIKDIRATYTKDFVSKDITKRQIAVATYLIDKLALRAGNEKDDDEAD 596

Query: 1232 TVGCCTLKVENVELVPPNKLKFDFLGKDSIRYLNTVEVEPHVYKAIGDFQIAKKSNXXXX 1411
            TVGCCTLKVENV   PPN L+FDFLGKDSIRY  TVEVE  VYKAI  F++ K  +    
Sbjct: 597  TVGCCTLKVENVIPEPPNSLQFDFLGKDSIRYEKTVEVELPVYKAIEQFRVGKSGS---- 652

Query: 1412 XXXXXXXXXXXTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETKDGSVPEKITVY 1591
                       TSKLNAHLKELMPGLTAKVFRTYNASITLD +LNK+TK+G V +K+ VY
Sbjct: 653  ---DDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKDTKEGDVAQKVVVY 709

Query: 1592 QHANKEVAIICNHQRSVSKSHENQMSKLNEKINDLTSQRDELMMDLSRAKKGKPPLKDKE 1771
            QHANKEVAIICNHQR++SKSH  QM++L EKI+++    + L  DL+RAKKGKPPLKD +
Sbjct: 710  QHANKEVAIICNHQRTISKSHTAQMTRLTEKIDEMKGVLNGLKTDLARAKKGKPPLKDAD 769

Query: 1772 GKPKKNLAPEVIEKKIAQVDAKIGKMEMDKQIKEDLKTVALGTSKINYLDPRISVAWCKR 1951
            GK ++NL PE +E+KIAQ +AKI KME DK  KEDLKTVALGTSKINYLDPRISVAWCKR
Sbjct: 770  GK-RRNLTPEALERKIAQTNAKIEKMERDKDTKEDLKTVALGTSKINYLDPRISVAWCKR 828

Query: 1952 HEVPIEKIFNKSLLAKFAWAMDVDPDFRF 2038
             EVPIEK+FNKSLLAKFAWAMDV PDFRF
Sbjct: 829  QEVPIEKVFNKSLLAKFAWAMDVPPDFRF 857