BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00008015
         (1875 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR02191.1| phytochrome A [Cyrtosia septentrionalis]               795   0.0  
gb|EXB57569.1| Phytochrome type A [Morus notabilis]                   775   0.0  
sp|O49934.1|PHYA_POPTM RecName: Full=Phytochrome A gi|2664190|em...   764   0.0  
gb|AEK26583.1| phytochrome A [Populus tremula]                        764   0.0  
gb|AEA50880.1| phyA [Populus tremula]                                 764   0.0  
ref|XP_002318913.1| phytochrome A family protein [Populus tricho...   763   0.0  
ref|XP_004302312.1| PREDICTED: phytochrome A-like [Fragaria vesc...   759   0.0  
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...   759   0.0  
gb|ACC60969.1| phytochrome A [Vitis riparia]                          758   0.0  
ref|XP_002512596.1| phytochrome A, putative [Ricinus communis] g...   758   0.0  
gb|ACV87353.1| phytochrome A [Aquilegia formosa]                      758   0.0  
gb|EOY11803.1| Phytochrome A [Theobroma cacao]                        757   0.0  
dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]                   756   0.0  
gb|AAP06787.1| phytochrome A1 apoprotein [Zea mays] gi|414872502...   755   0.0  
emb|CDG41614.1| Phytochrome A [Rhazya stricta]                        754   0.0  
sp|P19862.1|PHYA1_MAIZE RecName: Full=Phytochrome A gi|29293912|...   754   0.0  
ref|XP_004146753.1| PREDICTED: phytochrome A-like [Cucumis sativus]   753   0.0  
gb|AAR08427.1| phytochrome A [Monotropastrum globosum]                753   0.0  
sp|P93526.1|PHYA_SORBI RecName: Full=Phytochrome a gi|1800215|gb...   752   0.0  
ref|XP_002463975.1| hypothetical protein SORBIDRAFT_01g009930 [S...   752   0.0  

>gb|AAR02191.1| phytochrome A [Cyrtosia septentrionalis]
          Length = 1118

 Score =  795 bits (2054), Expect = 0.0
 Identities = 390/488 (79%), Positives = 431/488 (88%), Gaps = 2/488 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEERRSEKVTAYLQHIQKGKLIQPF 1284
            I+AQTTVDAKLDAEF+  G  FDYSQS+ A    P +E+RSEKVTAYLQHIQ+GKLIQPF
Sbjct: 22   IIAQTTVDAKLDAEFDAMGTCFDYSQSIRA----PPDEQRSEKVTAYLQHIQRGKLIQPF 77

Query: 1283 GCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAALQK 1104
            GCLLALDEK FKV+A+SENAPEMLTMVS TVPSVGDHPT+ IGTDVR+LFTSPSTAALQK
Sbjct: 78   GCLLALDEKTFKVLAFSENAPEMLTMVSFTVPSVGDHPTIVIGTDVRNLFTSPSTAALQK 137

Query: 1103 ALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSYKL 924
            ALGF EVSLLNPILVHCK+SG+PFYAIVHRVTGCLI+DFEPVKP++VPMTAAGALQSYKL
Sbjct: 138  ALGFAEVSLLNPILVHCKSSGRPFYAIVHRVTGCLIVDFEPVKPNDVPMTAAGALQSYKL 197

Query: 923  AAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGLEP 744
            AAKAI+KLQSLP G+M++LCNTVIEEVF+LTGYDRVMVYKFH+DDHGEVFAEITKPGLE 
Sbjct: 198  AAKAISKLQSLPSGSMEKLCNTVIEEVFELTGYDRVMVYKFHEDDHGEVFAEITKPGLES 257

Query: 743  YLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPHSC 564
            Y GLHYPATDIPQAARFLFMKNKVR+ICDC AK VK+YQD KLPFDI+FCGSTLRAPHSC
Sbjct: 258  YFGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVYQDKKLPFDISFCGSTLRAPHSC 317

Query: 563  HLQYMENMNSIASLVMAVAVNESGEN--EDAETEQQQQKRKRLWGLVVCHNESPRFVPFP 390
            HLQYMENMNSIASLVMAV VNE  E+   +AE      +RKRLWGLVVCHNESPRFVPFP
Sbjct: 318  HLQYMENMNSIASLVMAVVVNEGEEDGGNEAEENSPPHRRKRLWGLVVCHNESPRFVPFP 377

Query: 389  LRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMD 210
            LRYACEFLMQVFAIHV+KEFELEN ++EK I+RTQT+LCDMLL+E  P+GI+TQTPNIMD
Sbjct: 378  LRYACEFLMQVFAIHVNKEFELENLVKEKKIMRTQTMLCDMLLREFVPLGIITQTPNIMD 437

Query: 209  LVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASAL 30
            LVKCDGAA LYQ+KIWRLG+ PSE QI DI +WL+  HM           +AGYPG S+L
Sbjct: 438  LVKCDGAAFLYQDKIWRLGVTPSEPQIYDIVHWLSACHMDSTGLSTDNLHEAGYPGISSL 497

Query: 29   GDDACGMA 6
            GD  CGMA
Sbjct: 498  GDVVCGMA 505


>gb|EXB57569.1| Phytochrome type A [Morus notabilis]
          Length = 1130

 Score =  775 bits (2002), Expect = 0.0
 Identities = 382/489 (78%), Positives = 427/489 (87%), Gaps = 2/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKGKLIQ 1290
            IVAQTTVDAKL AEFEE G SFDYS S+     T  +++ RS+KVT AYL HIQKGKLIQ
Sbjct: 22   IVAQTTVDAKLHAEFEETGSSFDYSSSIRVSNSTSADQQPRSDKVTTAYLHHIQKGKLIQ 81

Query: 1289 PFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAAL 1110
            PFGCLLALDEK  KVIAYSENAPEMLTMVSH VPSVGDHP LGIGTDVR++FT+PS +AL
Sbjct: 82   PFGCLLALDEKTLKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDVRTIFTAPSASAL 141

Query: 1109 QKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSY 930
            QKALGF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGALQSY
Sbjct: 142  QKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201

Query: 929  KLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGL 750
            KLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDRVM YKFH+DDHGEV +EITKPGL
Sbjct: 202  KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVVSEITKPGL 261

Query: 749  EPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPH 570
            EPYLGLHYPATDIPQAARFLFMKNKVR+I DC AK VK++QD+KLPFD+T CGSTLRAPH
Sbjct: 262  EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKVFQDEKLPFDLTLCGSTLRAPH 321

Query: 569  SCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRFVPFP 390
            SCHLQYM+NMNSIASLVMAV VNE  +++D+    Q QKRKRLWGLVVCHN SPRFVPFP
Sbjct: 322  SCHLQYMDNMNSIASLVMAVVVNEGDDDDDSPNSSQPQKRKRLWGLVVCHNTSPRFVPFP 381

Query: 389  LRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMD 210
            LRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDML+++ +P+GIV+Q+PNIMD
Sbjct: 382  LRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRD-APLGIVSQSPNIMD 440

Query: 209  LVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASAL 30
            LVKCDGAALLY+NK+WRLG+ PS+SQ+ DI  WL+E+HM           DAGYPGA AL
Sbjct: 441  LVKCDGAALLYRNKVWRLGIAPSDSQLHDIVLWLSEHHMDSTGLSTDSLYDAGYPGAHAL 500

Query: 29   GDDACGMAA 3
             D  CGMAA
Sbjct: 501  DDVICGMAA 509


>sp|O49934.1|PHYA_POPTM RecName: Full=Phytochrome A gi|2664190|emb|CAA04679.1| phytochrome A
            [Populus tremula x Populus tremuloides]
          Length = 1125

 Score =  764 bits (1972), Expect = 0.0
 Identities = 374/489 (76%), Positives = 422/489 (86%), Gaps = 2/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKGKLIQ 1290
            I+AQTTVDAKL A+FEE G SFDYS SV       G++  RS+KVT AYL HIQKGKLIQ
Sbjct: 22   IIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKLIQ 81

Query: 1289 PFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAAL 1110
            PFGCLLALDEK F+V+AYSENAPE+LTMVSH VPSVG+HP LGIGTD+R++FT+PS +AL
Sbjct: 82   PFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSASAL 141

Query: 1109 QKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSY 930
            QKA+GF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGALQSY
Sbjct: 142  QKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201

Query: 929  KLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGL 750
            KLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDR M YKFHDDDHGEV +E+TKPG+
Sbjct: 202  KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKPGM 261

Query: 749  EPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPH 570
            EPYLGLHYPATDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLPFD+T CGSTLRAPH
Sbjct: 262  EPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPH 321

Query: 569  SCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRFVPFP 390
            SCHLQYMENMNSIASLVMAV VN+  E+ D       QKRKRLWGLVVCHN SPRFVPFP
Sbjct: 322  SCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVPFP 381

Query: 389  LRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMD 210
            LRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDML+++ +P+GIVTQ+PNIMD
Sbjct: 382  LRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRD-APLGIVTQSPNIMD 440

Query: 209  LVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASAL 30
            LVKCDGA L Y+NKIWRLG+ PS+ Q++DIA+WL+E HM           DAGYPGA AL
Sbjct: 441  LVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALAL 500

Query: 29   GDDACGMAA 3
            GD  CGMAA
Sbjct: 501  GDVVCGMAA 509


>gb|AEK26583.1| phytochrome A [Populus tremula]
          Length = 1109

 Score =  764 bits (1972), Expect = 0.0
 Identities = 374/489 (76%), Positives = 422/489 (86%), Gaps = 2/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKGKLIQ 1290
            I+AQTTVDAKL A+FEE G SFDYS SV       G++  RS+KVT AYL HIQKGKLIQ
Sbjct: 22   IIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKLIQ 81

Query: 1289 PFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAAL 1110
            PFGCLLALDEK F+V+AYSENAPE+LTMVSH VPSVG+HP LGIGTD+R++FT+PS +AL
Sbjct: 82   PFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSASAL 141

Query: 1109 QKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSY 930
            QKA+GF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGALQSY
Sbjct: 142  QKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201

Query: 929  KLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGL 750
            KLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDR M YKFHDDDHGEV +E+TKPG+
Sbjct: 202  KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKPGM 261

Query: 749  EPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPH 570
            EPYLGLHYPATDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLPFD+T CGSTLRAPH
Sbjct: 262  EPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPH 321

Query: 569  SCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRFVPFP 390
            SCHLQYMENMNSIASLVMAV VN+  E+ D       QKRKRLWGLVVCHN SPRFVPFP
Sbjct: 322  SCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVPFP 381

Query: 389  LRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMD 210
            LRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDML+++ +P+GIVTQ+PNIMD
Sbjct: 382  LRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRD-APLGIVTQSPNIMD 440

Query: 209  LVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASAL 30
            LVKCDGA L Y+NKIWRLG+ PS+ Q++DIA+WL+E HM           DAGYPGA AL
Sbjct: 441  LVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALAL 500

Query: 29   GDDACGMAA 3
            GD  CGMAA
Sbjct: 501  GDVVCGMAA 509


>gb|AEA50880.1| phyA [Populus tremula]
          Length = 958

 Score =  764 bits (1972), Expect = 0.0
 Identities = 374/489 (76%), Positives = 422/489 (86%), Gaps = 2/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKGKLIQ 1290
            I+AQTTVDAKL A+FEE G SFDYS SV       G++  RS+KVT AYL HIQKGKLIQ
Sbjct: 22   IIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKLIQ 81

Query: 1289 PFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAAL 1110
            PFGCLLALDEK F+V+AYSENAPE+LTMVSH VPSVG+HP LGIGTD+R++FT+PS +AL
Sbjct: 82   PFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSASAL 141

Query: 1109 QKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSY 930
            QKA+GF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGALQSY
Sbjct: 142  QKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201

Query: 929  KLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGL 750
            KLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDR M YKFHDDDHGEV +E+TKPG+
Sbjct: 202  KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKPGM 261

Query: 749  EPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPH 570
            EPYLGLHYPATDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLPFD+T CGSTLRAPH
Sbjct: 262  EPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPH 321

Query: 569  SCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRFVPFP 390
            SCHLQYMENMNSIASLVMAV VN+  E+ D       QKRKRLWGLVVCHN SPRFVPFP
Sbjct: 322  SCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVPFP 381

Query: 389  LRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMD 210
            LRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDML+++ +P+GIVTQ+PNIMD
Sbjct: 382  LRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRD-APLGIVTQSPNIMD 440

Query: 209  LVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASAL 30
            LVKCDGA L Y+NKIWRLG+ PS+ Q++DIA+WL+E HM           DAGYPGA AL
Sbjct: 441  LVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALAL 500

Query: 29   GDDACGMAA 3
            GD  CGMAA
Sbjct: 501  GDVVCGMAA 509


>ref|XP_002318913.1| phytochrome A family protein [Populus trichocarpa]
            gi|222857289|gb|EEE94836.1| phytochrome A family protein
            [Populus trichocarpa]
          Length = 1126

 Score =  763 bits (1970), Expect = 0.0
 Identities = 374/489 (76%), Positives = 421/489 (86%), Gaps = 2/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTA-YLQHIQKGKLIQ 1290
            I+AQTTVDAKL A+FEE G SFDYS SV       G++  RS+KVT  YL HIQKGKLIQ
Sbjct: 22   IIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTTYLHHIQKGKLIQ 81

Query: 1289 PFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAAL 1110
            PFGCLLALDEK FKV+AYSENAPE+LTMVSH VPSVG+HP LGIGTD+R++FT+PS +AL
Sbjct: 82   PFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSASAL 141

Query: 1109 QKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSY 930
            QKA+GF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGALQSY
Sbjct: 142  QKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201

Query: 929  KLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGL 750
            KLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDR M YKFHDDDHGEV +E+TKPG+
Sbjct: 202  KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKPGM 261

Query: 749  EPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPH 570
            EPYLGLHYPATDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLPFD+T CGSTLRAPH
Sbjct: 262  EPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPH 321

Query: 569  SCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRFVPFP 390
            SCHLQYMENMNSIASLVMAV VN+  E+ D       QKRKRLWGLVVCHN SPRFVPFP
Sbjct: 322  SCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQKRKRLWGLVVCHNTSPRFVPFP 381

Query: 389  LRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMD 210
            LRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDML+++ +P+GIVTQ+PNIMD
Sbjct: 382  LRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRD-APLGIVTQSPNIMD 440

Query: 209  LVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASAL 30
            LVKCDGA L Y+NKIWRLG+ PS+ Q++DIA+WL+E HM           DAGYPGA AL
Sbjct: 441  LVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALAL 500

Query: 29   GDDACGMAA 3
            GD  CGMAA
Sbjct: 501  GDVVCGMAA 509


>ref|XP_004302312.1| PREDICTED: phytochrome A-like [Fragaria vesca subsp. vesca]
          Length = 1124

 Score =  759 bits (1961), Expect = 0.0
 Identities = 376/489 (76%), Positives = 422/489 (86%), Gaps = 2/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKGKLIQ 1290
            ++AQTTVDAKL A FEE G SFDYS SV    E  G+++ RS+KVT AYL HIQKGKLIQ
Sbjct: 22   VIAQTTVDAKLHANFEESGSSFDYSNSVRVSSEVTGDQQPRSDKVTTAYLHHIQKGKLIQ 81

Query: 1289 PFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAAL 1110
            PFGCLLALD+K F+VIAYSENAPEMLTMVSH VPSVGDHP LGIGTDVR++FT PS +AL
Sbjct: 82   PFGCLLALDDKTFRVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDVRTIFTGPSASAL 141

Query: 1109 QKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSY 930
             KALGF EVSLLNPILVHCK+SGKPFYAIVHRVTG L+IDFEPVKP EVPMTAAGALQSY
Sbjct: 142  HKALGFGEVSLLNPILVHCKSSGKPFYAIVHRVTGSLVIDFEPVKPYEVPMTAAGALQSY 201

Query: 929  KLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGL 750
            KLAAKAIA+LQSLP G+++RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV AE+TKPGL
Sbjct: 202  KLAAKAIARLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVAELTKPGL 261

Query: 749  EPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPH 570
            EPYLGLHYP+TDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLP D+T CGSTLRAPH
Sbjct: 262  EPYLGLHYPSTDIPQASRFLFMKNKVRMIVDCCAKNVKVLQDEKLPLDLTLCGSTLRAPH 321

Query: 569  SCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRFVPFP 390
            SCHLQYMENMNSIASLVMAV +NE  +        Q QKRKRLWGLVVCHN +PRFVPFP
Sbjct: 322  SCHLQYMENMNSIASLVMAVVINEGDDEVAGPDSAQTQKRKRLWGLVVCHNTTPRFVPFP 381

Query: 389  LRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMD 210
            LRYACEFL QVFAIHV+KE ELE+Q+ EKNILRTQTLLCDMLL++ +P+GIV+QTPNIMD
Sbjct: 382  LRYACEFLAQVFAIHVNKELELEDQMIEKNILRTQTLLCDMLLRD-APLGIVSQTPNIMD 440

Query: 209  LVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASAL 30
            LVKCDGAALLY+NKIWRLGL PS+ QI+DI+ WL+E HM           DAG+PGA AL
Sbjct: 441  LVKCDGAALLYKNKIWRLGLTPSDFQIQDISLWLSECHMDSTGLSTDSLYDAGFPGALAL 500

Query: 29   GDDACGMAA 3
            GD  CGMAA
Sbjct: 501  GDVVCGMAA 509


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score =  759 bits (1961), Expect = 0.0
 Identities = 372/488 (76%), Positives = 421/488 (86%), Gaps = 1/488 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEERRSEKVT-AYLQHIQKGKLIQP 1287
            I+AQTTVDAKL A+FEE G SFDYS SV        ++ RS+KVT AYL HIQKGKLIQP
Sbjct: 22   IIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHIQKGKLIQP 81

Query: 1286 FGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAALQ 1107
            FG LLALDEK FKVIAYSENAPEMLTMVSH VPSVG+HP LGIGTDVR++F+ PS +AL 
Sbjct: 82   FGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSASALH 141

Query: 1106 KALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSYK 927
            KALGF EVSLLNPILVHCKTSGKPFYAI+HRVTG LIIDFEPVKP EVPMTAAGALQSYK
Sbjct: 142  KALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 201

Query: 926  LAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGLE 747
            LAAKAI +LQSLP G+++RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +EITKPGLE
Sbjct: 202  LAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGLE 261

Query: 746  PYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPHS 567
            PYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK +++ QD+KLPFD+T CGSTLRAPHS
Sbjct: 262  PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAPHS 321

Query: 566  CHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRFVPFPL 387
            CH+QYMENMNSIASLVMAV VN+  E  ++    Q QKRKRLWGLVVCH+ +PRFVPFPL
Sbjct: 322  CHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVPFPL 381

Query: 386  RYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMDL 207
            RYACEFL QVFAIHV+KE ELE+QI EKNILRTQTLLCDML+++ +P+GIV+Q+PN+MDL
Sbjct: 382  RYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRD-APLGIVSQSPNVMDL 440

Query: 206  VKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASALG 27
            VKCDGAALLY+NK+WRLG+ PS+ Q+ DI  WL+E HM           DAGYPGA ALG
Sbjct: 441  VKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALALG 500

Query: 26   DDACGMAA 3
            D  CGMAA
Sbjct: 501  DAVCGMAA 508


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score =  758 bits (1958), Expect = 0.0
 Identities = 371/488 (76%), Positives = 421/488 (86%), Gaps = 1/488 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEERRSEKVT-AYLQHIQKGKLIQP 1287
            I+AQTTVDAKL A+FEE G SFDYS SV        ++ RS+KVT AYL HIQKGKLIQP
Sbjct: 22   IIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHIQKGKLIQP 81

Query: 1286 FGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAALQ 1107
            FG LLALD+K FKVIAYSENAPEMLTMVSH VPSVG+HP LGIGTDVR++F+ PS +AL 
Sbjct: 82   FGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSASALH 141

Query: 1106 KALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSYK 927
            KALGF EVSLLNPILVHCKTSGKPFYAI+HRVTG LIIDFEPVKP EVPMTAAGALQSYK
Sbjct: 142  KALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 201

Query: 926  LAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGLE 747
            LAAKAI +LQSLP G+++RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +EITKPGLE
Sbjct: 202  LAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGLE 261

Query: 746  PYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPHS 567
            PYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK +++ QD+KLPFD+T CGSTLRAPHS
Sbjct: 262  PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAPHS 321

Query: 566  CHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRFVPFPL 387
            CH+QYMENMNSIASLVMAV VN+  E  ++    Q QKRKRLWGLVVCH+ +PRFVPFPL
Sbjct: 322  CHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVPFPL 381

Query: 386  RYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMDL 207
            RYACEFL QVFAIHV+KE ELE+QI EKNILRTQTLLCDML+++ +P+GIV+Q+PN+MDL
Sbjct: 382  RYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRD-APLGIVSQSPNVMDL 440

Query: 206  VKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASALG 27
            VKCDGAALLY+NK+WRLG+ PS+ Q+ DI  WL+E HM           DAGYPGA ALG
Sbjct: 441  VKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALALG 500

Query: 26   DDACGMAA 3
            D  CGMAA
Sbjct: 501  DAVCGMAA 508


>ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
            gi|223548557|gb|EEF50048.1| phytochrome A, putative
            [Ricinus communis]
          Length = 1124

 Score =  758 bits (1957), Expect = 0.0
 Identities = 376/489 (76%), Positives = 422/489 (86%), Gaps = 2/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKGKLIQ 1290
            I++QT VDAKL A+FEE G SFDYS SV     T  +   RS+KVT AYL HIQKGKLIQ
Sbjct: 22   IISQTAVDAKLHADFEESGSSFDYSNSVHVTSSTGLDHAPRSDKVTTAYLHHIQKGKLIQ 81

Query: 1289 PFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAAL 1110
            PFGCLLALDEK +KVIAYSENAPEMLTMVSH VPSVGDHP LGIGTD+R++FT+PS +AL
Sbjct: 82   PFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTAPSASAL 141

Query: 1109 QKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSY 930
            QKALGF +VSLLNPILVHCKTSGKPFYAIVHRVTG  IIDFEPVKP EVPMTAAGALQSY
Sbjct: 142  QKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFIIDFEPVKPYEVPMTAAGALQSY 201

Query: 929  KLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGL 750
            KLAAKAI++LQSLP G+M+RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +E+TKPGL
Sbjct: 202  KLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEVTKPGL 261

Query: 749  EPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPH 570
            EPYLGLHYPATDIPQAARFLFMKNKVR+I DCRAK VK+ QD+KLP ++T CGSTLRAPH
Sbjct: 262  EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKLPLELTLCGSTLRAPH 321

Query: 569  SCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRFVPFP 390
            SCHLQYMENM+S+ASLVMAV VNE  E++D+ T  Q QKRKRLWGLVVCHN +PRFVPFP
Sbjct: 322  SCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQKRKRLWGLVVCHNTTPRFVPFP 381

Query: 389  LRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMD 210
            LRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDMLL++ +P+GI+TQ+PNI D
Sbjct: 382  LRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLLRD-APLGILTQSPNITD 440

Query: 209  LVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASAL 30
            LVKCDGAALLY+NKIWRLG+ PS+ QIRDIA WL+E HM           DAGY  A +L
Sbjct: 441  LVKCDGAALLYKNKIWRLGVTPSDLQIRDIAVWLSEYHMDSTGLSTDSLYDAGYSAALSL 500

Query: 29   GDDACGMAA 3
             D  CGMAA
Sbjct: 501  EDVVCGMAA 509


>gb|ACV87353.1| phytochrome A [Aquilegia formosa]
          Length = 1130

 Score =  758 bits (1956), Expect = 0.0
 Identities = 374/488 (76%), Positives = 418/488 (85%), Gaps = 1/488 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEERRSEKVTAYLQHIQKGKLIQPF 1284
            ++AQTTVDAKL AEFEE G SFDYS+SVS    +  + R  +  TAYL  IQKGK IQPF
Sbjct: 22   VIAQTTVDAKLHAEFEETGSSFDYSRSVSVTNSSNQQTRSDKVTTAYLHQIQKGKQIQPF 81

Query: 1283 GCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAALQK 1104
            GCLLALDEK  KVIAYSENAPEMLTMVSH VPSVG+HP LGIGTD++++ TSPS +ALQK
Sbjct: 82   GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLKTILTSPSASALQK 141

Query: 1103 ALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSYKL 924
            AL F +V+LLNPILVHCK+SGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGALQSYKL
Sbjct: 142  ALAFSDVTLLNPILVHCKSSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKL 201

Query: 923  AAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGLEP 744
            AAKAIA+LQSLP G++ RLC+TV+EEVF LTGYDRVMVYKFHDDDHGEV +E TK GL P
Sbjct: 202  AAKAIARLQSLPSGSIDRLCDTVVEEVFQLTGYDRVMVYKFHDDDHGEVVSETTKEGLPP 261

Query: 743  YLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPHSC 564
            YLGLHYPATDIPQAARFLFMKNK+R+ICDCRAK V++ QD+KLPF++T CGSTLRAPHSC
Sbjct: 262  YLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLPFELTLCGSTLRAPHSC 321

Query: 563  HLQYMENMNSIASLVMAVAVNESGENE-DAETEQQQQKRKRLWGLVVCHNESPRFVPFPL 387
            HLQYMENM+SIASLVMAV +N+  E E   E   Q QKRKRLWGLVVCHN +PRFVPFPL
Sbjct: 322  HLQYMENMDSIASLVMAVVINDGDEEEGTVEGASQSQKRKRLWGLVVCHNTTPRFVPFPL 381

Query: 386  RYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMDL 207
            RYACEFL+QVFAIHV+KEFELENQI EKNILRTQTLLCDML++  +P+GIV+Q+PNIMDL
Sbjct: 382  RYACEFLIQVFAIHVNKEFELENQILEKNILRTQTLLCDMLMR-NAPIGIVSQSPNIMDL 440

Query: 206  VKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASALG 27
            VKCDGAALLYQNKIWRLGL PSES IRDIA WL+E HM           DAG+PGA ++G
Sbjct: 441  VKCDGAALLYQNKIWRLGLSPSESHIRDIASWLSEYHMDSTGLSTDSLYDAGFPGALSIG 500

Query: 26   DDACGMAA 3
            D  CGMAA
Sbjct: 501  DTVCGMAA 508


>gb|EOY11803.1| Phytochrome A [Theobroma cacao]
          Length = 1121

 Score =  757 bits (1954), Expect = 0.0
 Identities = 376/489 (76%), Positives = 424/489 (86%), Gaps = 2/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEERRSEKVT-AYLQHIQKGKLIQP 1287
            I+AQTTVDAKL A FEE G SFDYS SV   R +  ++ RS++VT AYL  IQKGK IQP
Sbjct: 22   IIAQTTVDAKLHANFEESGSSFDYSSSV---RVSGDQQPRSDRVTTAYLHQIQKGKFIQP 78

Query: 1286 FGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAALQ 1107
            FGCLLALDEK +KVIAYSENAPEMLTMVSH VPSVGDHP LGIGTD++++FT+PS++AL 
Sbjct: 79   FGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIKTIFTAPSSSALL 138

Query: 1106 KALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSYK 927
            KALG  EVSLLNPILVHCKTSGKPFYAI+HRVTG LIIDFEPVKP EVPMTAAGALQSYK
Sbjct: 139  KALGIGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 198

Query: 926  LAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGLE 747
            LAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +EITKPGLE
Sbjct: 199  LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGLE 258

Query: 746  PYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPHS 567
            PYLGLHYPATDIPQAARFLFMKNKVR+I DC AK VK++QDDKLPFD+T CGSTLRAPHS
Sbjct: 259  PYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKVFQDDKLPFDLTLCGSTLRAPHS 318

Query: 566  CHLQYMENMNSIASLVMAVAVNESGENEDA-ETEQQQQKRKRLWGLVVCHNESPRFVPFP 390
            CHLQYMENMNSIASLVMAV VN+  E  D  ++ Q QQKRKRLWGLVVCHN +PRFVPFP
Sbjct: 319  CHLQYMENMNSIASLVMAVIVNDGDEEGDGPDSAQPQQKRKRLWGLVVCHNTTPRFVPFP 378

Query: 389  LRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMD 210
            LRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDMLL++ +P+GI++Q+PNIMD
Sbjct: 379  LRYACEFLAQVFAIHVNKEIELENQIIEKNILRTQTLLCDMLLRD-APMGIISQSPNIMD 437

Query: 209  LVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASAL 30
            LVKCDGAALLY+NKIW+LG+ PS+ Q+ +IA WL+E HM           DAG+PGA AL
Sbjct: 438  LVKCDGAALLYKNKIWKLGVTPSDFQLHEIASWLSEYHMDSTGLSTDSLYDAGFPGALAL 497

Query: 29   GDDACGMAA 3
            GD  CGMAA
Sbjct: 498  GDVVCGMAA 506


>dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]
          Length = 1124

 Score =  756 bits (1953), Expect = 0.0
 Identities = 376/489 (76%), Positives = 421/489 (86%), Gaps = 2/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKGKLIQ 1290
            ++AQTTVDAKL A FEE G SFDYS SV    E  G+++ RS+KVT AYL HIQKGKLIQ
Sbjct: 22   VIAQTTVDAKLHANFEESGSSFDYSNSVRVSSEVTGDQQPRSDKVTTAYLHHIQKGKLIQ 81

Query: 1289 PFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAAL 1110
            PFGCLLALD+K F+VIAYSENAPEMLTMVSH VPSVGDHP LGIGTDVR++FT PS +AL
Sbjct: 82   PFGCLLALDDKTFRVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDVRTIFTGPSASAL 141

Query: 1109 QKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSY 930
             KALGF EVSLLNPILVHCK+SGKPFYAIVHRVTG L+IDFEPVKP EVPMTAAGALQSY
Sbjct: 142  HKALGFGEVSLLNPILVHCKSSGKPFYAIVHRVTGSLVIDFEPVKPYEVPMTAAGALQSY 201

Query: 929  KLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGL 750
            KLAAKAIA+LQSLP G+++RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV AE+TK GL
Sbjct: 202  KLAAKAIARLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVAELTKTGL 261

Query: 749  EPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPH 570
            EPYLGLHYP+TDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLP D+T CGSTLRAPH
Sbjct: 262  EPYLGLHYPSTDIPQASRFLFMKNKVRMIVDCCAKNVKVLQDEKLPLDLTLCGSTLRAPH 321

Query: 569  SCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRFVPFP 390
            SCHLQYMENMNSIASLVMAV +NE           Q QKRKRLWGLVVCHN +PRFVPFP
Sbjct: 322  SCHLQYMENMNSIASLVMAVVINEGDYEVAGPDSAQTQKRKRLWGLVVCHNTTPRFVPFP 381

Query: 389  LRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMD 210
            LRYACEFL QVFAIHV+KE ELE+Q+ EKNILRTQTLLCDMLL++ +P+GIV+QTPNIMD
Sbjct: 382  LRYACEFLAQVFAIHVNKELELEDQMIEKNILRTQTLLCDMLLRD-APLGIVSQTPNIMD 440

Query: 209  LVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASAL 30
            LVKCDGAALLY+NKIWRLGL PS+ QI+DI+ WL+E HM           DAG+PGA AL
Sbjct: 441  LVKCDGAALLYKNKIWRLGLTPSDFQIQDISLWLSECHMDSTGLSTDSLYDAGFPGALAL 500

Query: 29   GDDACGMAA 3
            GD ACGMAA
Sbjct: 501  GDVACGMAA 509


>gb|AAP06787.1| phytochrome A1 apoprotein [Zea mays] gi|414872502|tpg|DAA51059.1|
            TPA: phytochromeA1 [Zea mays]
          Length = 1131

 Score =  755 bits (1950), Expect = 0.0
 Identities = 370/489 (75%), Positives = 426/489 (87%), Gaps = 3/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLIQP 1287
            I+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLIQP
Sbjct: 24   ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRGKLIQP 83

Query: 1286 FGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAALQ 1107
            FGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   ALQ
Sbjct: 84   FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143

Query: 1106 KALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSYK 927
            KALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQSYK
Sbjct: 144  KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203

Query: 926  LAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGLE 747
            LAAKAI+K+QSLPGG+MQ LCNTV++EVFDLTGYDRVM YKFH+D+HGEVFAEITKPG+E
Sbjct: 204  LAAKAISKIQSLPGGSMQALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263

Query: 746  PYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPHS 567
            PYLGLHYPATDIPQAARFLFMKNKVR+ICDCRA+ VKI +D+ L  DI+ CGSTLRAPHS
Sbjct: 264  PYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRAPHS 323

Query: 566  CHLQYMENMNSIASLVMAVAVNESGENEDAETEQ--QQQKRKRLWGLVVCHNESPRFVPF 393
            CHLQYMENMNSIASLVMAV VNE+ ++++ E+EQ  QQQKRK+LWGL+VCH+ESPR+VPF
Sbjct: 324  CHLQYMENMNSIASLVMAVVVNENEDDDEPESEQPPQQQKRKKLWGLIVCHHESPRYVPF 383

Query: 392  PLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIM 213
            PLRYACEFL QVFA+HV+KEFELE QIREK+ILR QT+L DML KE+SP+ IV+ +PNIM
Sbjct: 384  PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKESSPLSIVSGSPNIM 443

Query: 212  DLVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASA 33
            DLVKCDGAALLY +K+WRL   P+ESQIRDIA+WL+E H            DAGYPGA++
Sbjct: 444  DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503

Query: 32   LGDDACGMA 6
            LGD  CGMA
Sbjct: 504  LGDMICGMA 512


>emb|CDG41614.1| Phytochrome A [Rhazya stricta]
          Length = 960

 Score =  754 bits (1948), Expect = 0.0
 Identities = 371/489 (75%), Positives = 422/489 (86%), Gaps = 2/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTA-YLQHIQKGKLIQ 1290
            ++AQT++DAKL+A+FEE G SFDYS SV   R T GE++ RS++VT  YL  IQKGK IQ
Sbjct: 22   VIAQTSIDAKLNADFEESGSSFDYSSSV---RVTIGEQKPRSDRVTTTYLHQIQKGKFIQ 78

Query: 1289 PFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAAL 1110
            PFGCLLALDEK F+VIAYSENAPEMLTMVSH VPSVGD+P LGIGTD+R++FT PS AAL
Sbjct: 79   PFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDYPALGIGTDIRTIFTGPSAAAL 138

Query: 1109 QKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSY 930
             KA+GF EVSLLNPILVHCKTSGKPFYAIVHRVTG LI+DFEPVKP EVPMTAAGALQSY
Sbjct: 139  HKAMGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSY 198

Query: 929  KLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGL 750
            KLAAKAI +LQSLP G+++RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +EITKPGL
Sbjct: 199  KLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEITKPGL 258

Query: 749  EPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPH 570
            EPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK V++ QD+KLPFD+T CGSTLRAPH
Sbjct: 259  EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRVVQDEKLPFDLTLCGSTLRAPH 318

Query: 569  SCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRFVPFP 390
            SCHLQYMENMNSIASLVMA+ +N+  +  D     Q QKRKRLWGLVVCHN +PRFVPFP
Sbjct: 319  SCHLQYMENMNSIASLVMAIVINDGDDEGDTSDSAQPQKRKRLWGLVVCHNTTPRFVPFP 378

Query: 389  LRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIMD 210
            LRYACEFL QVFAIHV+KE ELENQI EKNIL+TQTLLCDML+++ +P+GIV+Q+PNIMD
Sbjct: 379  LRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRD-APLGIVSQSPNIMD 437

Query: 209  LVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASAL 30
            LVKCDGAALLY+NKI+RLGL PS+ Q+ DI  WL E HM           DAG+PGA AL
Sbjct: 438  LVKCDGAALLYKNKIYRLGLSPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGALAL 497

Query: 29   GDDACGMAA 3
            GD  CGMAA
Sbjct: 498  GDAVCGMAA 506


>sp|P19862.1|PHYA1_MAIZE RecName: Full=Phytochrome A gi|29293912|gb|AAO73469.1| phytochrome A2
            [Zea mays] gi|129560387|gb|ABO30572.1| phytochrome A2
            [Zea mays] gi|413933241|gb|AFW67792.1| phytochrome A [Zea
            mays]
          Length = 1131

 Score =  754 bits (1947), Expect = 0.0
 Identities = 369/489 (75%), Positives = 425/489 (86%), Gaps = 3/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLIQP 1287
            I+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLIQP
Sbjct: 24   ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRGKLIQP 83

Query: 1286 FGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAALQ 1107
            FGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   ALQ
Sbjct: 84   FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143

Query: 1106 KALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSYK 927
            KALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQSYK
Sbjct: 144  KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203

Query: 926  LAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGLE 747
            LAAKAI+K+QSLPGG+M+ LCNTV++EVFDLTGYDRVM YKFH+D+HGEVFAEITKPG+E
Sbjct: 204  LAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263

Query: 746  PYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPHS 567
            PY+GLHYPATDIPQAARFLFMKNKVR+ICDCRA+ VKI +D+ L  DI+ CGSTLRAPHS
Sbjct: 264  PYIGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRAPHS 323

Query: 566  CHLQYMENMNSIASLVMAVAVNESGENEDAETEQ--QQQKRKRLWGLVVCHNESPRFVPF 393
            CHL+YMENMNSIASLVMAV VNE+ E+++ E EQ  QQQK+KRLWGL+VCH+ESPR+VPF
Sbjct: 324  CHLKYMENMNSIASLVMAVVVNENEEDDEPEPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383

Query: 392  PLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIM 213
            PLRYACEFL QVFA+HV+KEFELE QIREKNILR QT+L DML KE+SP+ IV+ +PNIM
Sbjct: 384  PLRYACEFLAQVFAVHVNKEFELEKQIREKNILRMQTMLSDMLFKESSPLSIVSGSPNIM 443

Query: 212  DLVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASA 33
            DLVKCDGAALLY +K+WRL   P+ESQIRDIA+WL+E H            DAGYPGA++
Sbjct: 444  DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503

Query: 32   LGDDACGMA 6
            LGD  CGMA
Sbjct: 504  LGDMICGMA 512


>ref|XP_004146753.1| PREDICTED: phytochrome A-like [Cucumis sativus]
          Length = 1123

 Score =  753 bits (1945), Expect = 0.0
 Identities = 380/490 (77%), Positives = 423/490 (86%), Gaps = 3/490 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKGKLIQ 1290
            I+AQT+VDAKL A+FEE G SFDYS SV    +  G+ + RS+KVT AYL HIQKGKLIQ
Sbjct: 22   IIAQTSVDAKLHADFEESGNSFDYSSSVRVSSDVSGDHQPRSDKVTTAYLHHIQKGKLIQ 81

Query: 1289 PFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAAL 1110
            PFGCLLALDEK FKVIAYSENAPEMLTMVSH VPS+GD+P LGIGTDVR++FT+PS +AL
Sbjct: 82   PFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAPSASAL 141

Query: 1109 QKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSY 930
             KALGF EV+LLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVP+TAAGALQSY
Sbjct: 142  LKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPVTAAGALQSY 201

Query: 929  KLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGL 750
            KLAAKAI +LQSLP G M RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +E+TKPGL
Sbjct: 202  KLAAKAITRLQSLPSGCMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVTKPGL 261

Query: 749  EPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPH 570
            EPYLGLHYPATDIPQAARFLFMKNKVR+I DCRAK +K+ QD+KL FD+T CGSTLRAPH
Sbjct: 262  EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGSTLRAPH 321

Query: 569  SCHLQYMENMNSIASLVMAVAVNESGENEDAE-TEQQQQKRKRLWGLVVCHNESPRFVPF 393
            SCHLQYM NMNSIASLVMAV VNE   +EDAE    QQQKRKRLWGLVVCHN SPRFVPF
Sbjct: 322  SCHLQYMANMNSIASLVMAVVVNEG--DEDAEGPALQQQKRKRLWGLVVCHNTSPRFVPF 379

Query: 392  PLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIM 213
            PLRYACEFL QVFAIHV+KE ELENQI EKNILRTQTLLCDML+++ +P+GIV+++PNIM
Sbjct: 380  PLRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRD-APLGIVSRSPNIM 438

Query: 212  DLVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASA 33
            DLVK DGAALLY+NKIWRLG+ PS+  +RDIA WL E HM           DAGYPGA A
Sbjct: 439  DLVKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLAEYHMDSTGLSTDSLYDAGYPGALA 498

Query: 32   LGDDACGMAA 3
            LGD+ CGMAA
Sbjct: 499  LGDEVCGMAA 508


>gb|AAR08427.1| phytochrome A [Monotropastrum globosum]
          Length = 1130

 Score =  753 bits (1943), Expect = 0.0
 Identities = 373/493 (75%), Positives = 420/493 (85%), Gaps = 6/493 (1%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGE-ERRSEKVT-AYLQHIQKGKLIQ 1290
            I+AQTTVDAKL A+FEE GGSFDYS SV       G+ + RS+KVT AYL  IQ+GKLIQ
Sbjct: 22   IIAQTTVDAKLHADFEESGGSFDYSTSVRFTGTVGGDIQPRSDKVTTAYLHQIQRGKLIQ 81

Query: 1289 PFGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAAL 1110
            PFGCLLA+DEK FKVIAYSENAPEMLTMVSH VPSVGDHP LGIGTDVR++FT+PS AAL
Sbjct: 82   PFGCLLAVDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHPLLGIGTDVRTIFTNPSAAAL 141

Query: 1109 QKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSY 930
            QKA+G+ EVSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGALQSY
Sbjct: 142  QKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201

Query: 929  KLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGL 750
            KLAAKAI +LQSLP GNM+ LC+ +++EVF+LTGYDRVMVYKFHDDDHGEVF+E+TKPGL
Sbjct: 202  KLAAKAITRLQSLPSGNMRILCDAMVQEVFELTGYDRVMVYKFHDDDHGEVFSELTKPGL 261

Query: 749  EPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPH 570
            EPYLGLHYPATDIPQAARFLFMKNK+R+ICDC AK VK+ QDDKLP D+T CGSTLRAPH
Sbjct: 262  EPYLGLHYPATDIPQAARFLFMKNKIRMICDCHAKQVKVIQDDKLPIDLTLCGSTLRAPH 321

Query: 569  SCHLQYMENMNSIASLVMAVAVNESGENED----AETEQQQQKRKRLWGLVVCHNESPRF 402
            SCHLQYMENMNSIASLVM+V VNE  E  D    + +  QQQK KRLWGL+VCHN +PRF
Sbjct: 322  SCHLQYMENMNSIASLVMSVVVNEGDEEGDGGGSSVSSNQQQKIKRLWGLLVCHNTTPRF 381

Query: 401  VPFPLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTP 222
            VPFPLRYACEFL QVF IHV+KE ELENQI EKNILRTQTLLCDML+++ +P+GIV+Q+P
Sbjct: 382  VPFPLRYACEFLAQVFTIHVNKELELENQIHEKNILRTQTLLCDMLMRD-APLGIVSQSP 440

Query: 221  NIMDLVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPG 42
            N+MDLVKCDGA LLY++K +R+G  P++ Q+RDI YWL+E H            DAGYPG
Sbjct: 441  NVMDLVKCDGAVLLYKDKTYRMGTTPTDFQLRDIVYWLSEYHTDSTGLSTDSLYDAGYPG 500

Query: 41   ASALGDDACGMAA 3
            A A GD  CGMAA
Sbjct: 501  ALAFGDGVCGMAA 513


>sp|P93526.1|PHYA_SORBI RecName: Full=Phytochrome a gi|1800215|gb|AAB41397.1| phytochrome A
            [Sorghum bicolor] gi|39777227|gb|AAR30883.1| phytochrome
            A [Sorghum bicolor]
          Length = 1131

 Score =  752 bits (1941), Expect = 0.0
 Identities = 369/489 (75%), Positives = 423/489 (86%), Gaps = 3/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLIQP 1287
            I+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLIQP
Sbjct: 24   ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83

Query: 1286 FGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAALQ 1107
            FGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   ALQ
Sbjct: 84   FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143

Query: 1106 KALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSYK 927
            KALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQSYK
Sbjct: 144  KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203

Query: 926  LAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGLE 747
            LAAKAI+K+QSLPGG+M+ LCNTV++EVF+LTGYDRVM YKFH+D+HGEVFAEITKPG+E
Sbjct: 204  LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263

Query: 746  PYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPHS 567
            PYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VKI +D+ L  DI+ CGSTLRAPHS
Sbjct: 264  PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323

Query: 566  CHLQYMENMNSIASLVMAVAVNESGENEDAETEQ--QQQKRKRLWGLVVCHNESPRFVPF 393
            CHLQYMENMNSIASLVMAV VNE+ E+++   EQ  QQQK+KRLWGL+VCH+ESPR+VPF
Sbjct: 324  CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383

Query: 392  PLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIM 213
            PLRYACEFL QVFA+HV+KEFELE QIREK+ILR QT+L DML KE SP+ IV+ +PNIM
Sbjct: 384  PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443

Query: 212  DLVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASA 33
            DLVKCDGAALLY +K+WRL   P+ESQIRDIA+WL+E H            DAGYPGA++
Sbjct: 444  DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503

Query: 32   LGDDACGMA 6
            LGD  CGMA
Sbjct: 504  LGDMICGMA 512


>ref|XP_002463975.1| hypothetical protein SORBIDRAFT_01g009930 [Sorghum bicolor]
            gi|241917829|gb|EER90973.1| hypothetical protein
            SORBIDRAFT_01g009930 [Sorghum bicolor]
          Length = 1131

 Score =  752 bits (1941), Expect = 0.0
 Identities = 369/489 (75%), Positives = 423/489 (86%), Gaps = 3/489 (0%)
 Frame = -2

Query: 1463 IVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLIQP 1287
            I+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLIQP
Sbjct: 24   ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83

Query: 1286 FGCLLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAALQ 1107
            FGCLLALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   ALQ
Sbjct: 84   FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143

Query: 1106 KALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQSYK 927
            KALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQSYK
Sbjct: 144  KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203

Query: 926  LAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPGLE 747
            LAAKAI+K+QSLPGG+M+ LCNTV++EVF+LTGYDRVM YKFH+D+HGEVFAEITKPG+E
Sbjct: 204  LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263

Query: 746  PYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAPHS 567
            PYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VKI +D+ L  DI+ CGSTLRAPHS
Sbjct: 264  PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323

Query: 566  CHLQYMENMNSIASLVMAVAVNESGENEDAETEQ--QQQKRKRLWGLVVCHNESPRFVPF 393
            CHLQYMENMNSIASLVMAV VNE+ E+++   EQ  QQQK+KRLWGL+VCH+ESPR+VPF
Sbjct: 324  CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383

Query: 392  PLRYACEFLMQVFAIHVSKEFELENQIREKNILRTQTLLCDMLLKETSPVGIVTQTPNIM 213
            PLRYACEFL QVFA+HV+KEFELE QIREK+ILR QT+L DML KE SP+ IV+ +PNIM
Sbjct: 384  PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443

Query: 212  DLVKCDGAALLYQNKIWRLGLVPSESQIRDIAYWLTENHMXXXXXXXXXXXDAGYPGASA 33
            DLVKCDGAALLY +K+WRL   P+ESQIRDIA+WL+E H            DAGYPGA++
Sbjct: 444  DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503

Query: 32   LGDDACGMA 6
            LGD  CGMA
Sbjct: 504  LGDMICGMA 512