BLASTX nr result
ID: Zingiber23_contig00007988
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00007988
(363 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precu... 74 3e-11
ref|XP_006848386.1| hypothetical protein AMTR_s00013p00209880 [A... 72 6e-11
ref|XP_003595392.1| 50S ribosomal protein L18 [Medicago truncatu... 72 1e-10
gb|ACJ84202.1| unknown [Medicago truncatula] 72 1e-10
ref|XP_003595391.1| 50S ribosomal protein L18 [Medicago truncatu... 72 1e-10
ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloro... 71 2e-10
ref|XP_006349873.1| PREDICTED: 50S ribosomal protein L18, chloro... 70 2e-10
ref|XP_004252957.1| PREDICTED: 50S ribosomal protein L18, chloro... 70 2e-10
gb|EMJ27162.1| hypothetical protein PRUPE_ppa012509mg [Prunus pe... 69 5e-10
ref|XP_002270819.1| PREDICTED: 50S ribosomal protein L18, chloro... 68 1e-09
gb|ESW10584.1| hypothetical protein PHAVU_009G221700g [Phaseolus... 68 1e-09
ref|XP_004297049.1| PREDICTED: 50S ribosomal protein L18, chloro... 68 1e-09
ref|XP_002314349.1| predicted protein [Populus trichocarpa] gi|5... 67 2e-09
ref|XP_003546534.1| PREDICTED: 50S ribosomal protein L18, chloro... 67 2e-09
gb|EXB26141.1| 50S ribosomal protein L18 [Morus notabilis] 66 5e-09
gb|EPS74009.1| hypothetical protein M569_00746, partial [Genlise... 66 5e-09
gb|EOY31693.1| Ribosomal L18p/L5e family protein isoform 2 [Theo... 66 5e-09
gb|EOY31692.1| Ribosomal L18p/L5e family protein isoform 1 [Theo... 66 5e-09
ref|XP_006586621.1| PREDICTED: uncharacterized protein LOC100306... 65 7e-09
ref|NP_001236805.1| uncharacterized protein LOC100306308 [Glycin... 65 7e-09
>ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precursor, putative [Ricinus
communis] gi|223549811|gb|EEF51299.1| 50S ribosomal
protein L18, chloroplast precursor, putative [Ricinus
communis]
Length = 164
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +1
Query: 193 RPNKNPLTSTHPATAVSIVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
RPN P+ P + I A TRRENRTARH RIRKKV GTPERPR+S++RSNKH
Sbjct: 26 RPNPTPI---QPPRFLRIEANTKTRRENRTARHVRIRKKVEGTPERPRLSVFRSNKH 79
>ref|XP_006848386.1| hypothetical protein AMTR_s00013p00209880 [Amborella trichopoda]
gi|548851692|gb|ERN09967.1| hypothetical protein
AMTR_s00013p00209880 [Amborella trichopoda]
Length = 164
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1
Query: 202 KNPLTSTHPATAVSIVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
+ PL + + I AKAATRRENR ARHERIRKKV G+PERPR+ ++RSNKH
Sbjct: 26 RTPLFALKRTPLLRIDAKAATRRENRVARHERIRKKVEGSPERPRLCVFRSNKH 79
>ref|XP_003595392.1| 50S ribosomal protein L18 [Medicago truncatula]
gi|355484440|gb|AES65643.1| 50S ribosomal protein L18
[Medicago truncatula]
Length = 136
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = +1
Query: 184 LFFRPNKNPLTSTHPATAVSIVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
LF P NP +S+ +++S V +A TRRE+R ARH R+RKK+ GTPERPR+S++RSNKH
Sbjct: 25 LFTIPTPNPNSSS---SSLSFVVQATTRREDRIARHVRLRKKIEGTPERPRLSVFRSNKH 81
>gb|ACJ84202.1| unknown [Medicago truncatula]
Length = 166
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = +1
Query: 184 LFFRPNKNPLTSTHPATAVSIVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
LF P NP +S+ +++S V +A TRRE+R ARH R+RKK+ GTPERPR+S++RSNKH
Sbjct: 25 LFTIPTPNPNSSS---SSLSFVVQATTRREDRIARHVRLRKKIEGTPERPRLSVFRSNKH 81
>ref|XP_003595391.1| 50S ribosomal protein L18 [Medicago truncatula]
gi|124360326|gb|ABN08339.1| Ribosomal protein L18
[Medicago truncatula] gi|355484439|gb|AES65642.1| 50S
ribosomal protein L18 [Medicago truncatula]
gi|388519743|gb|AFK47933.1| unknown [Medicago
truncatula]
Length = 166
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = +1
Query: 184 LFFRPNKNPLTSTHPATAVSIVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
LF P NP +S+ +++S V +A TRRE+R ARH R+RKK+ GTPERPR+S++RSNKH
Sbjct: 25 LFTIPTPNPNSSS---SSLSFVVQATTRREDRIARHVRLRKKIEGTPERPRLSVFRSNKH 81
>ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
sativus] gi|449498793|ref|XP_004160635.1| PREDICTED: 50S
ribosomal protein L18, chloroplastic-like [Cucumis
sativus]
Length = 170
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +1
Query: 208 PLTSTHPATAVSIVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
P TS+ ++ + AKA TRRE+RTARH RIRKKV GT ERPR+S++RSNKH
Sbjct: 34 PTTSSSGRHSLVVEAKATTRREDRTARHSRIRKKVEGTTERPRLSVFRSNKH 85
>ref|XP_006349873.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Solanum
tuberosum]
Length = 162
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +1
Query: 226 PATAVSIVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
P +++ AKA TRRE+RTARH RIRKKV GTPERPRM ++RSNKH
Sbjct: 32 PIRVLTVEAKAKTRREDRTARHIRIRKKVEGTPERPRMCVFRSNKH 77
>ref|XP_004252957.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Solanum
lycopersicum]
Length = 162
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +1
Query: 226 PATAVSIVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
P +++ AKA TRRE+RTARH RIRKKV GTPERPRM ++RSNKH
Sbjct: 32 PIRVLTVEAKAKTRREDRTARHIRIRKKVEGTPERPRMCVFRSNKH 77
>gb|EMJ27162.1| hypothetical protein PRUPE_ppa012509mg [Prunus persica]
Length = 166
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Frame = +1
Query: 178 QLLFFRPNKNPLTST----HPATAVSIVAKAATRRENRTARHERIRKKVNGTPERPRMSI 345
Q L+ RP +T+T + ++ + AKA T+RE+RTARH RIRKKV GTPERPR+++
Sbjct: 16 QQLWLRPKLVGVTTTLSPRPQSQSLVVEAKATTKREDRTARHIRIRKKVEGTPERPRLAV 75
Query: 346 YRSNKH 363
+RSNKH
Sbjct: 76 FRSNKH 81
>ref|XP_002270819.1| PREDICTED: 50S ribosomal protein L18, chloroplastic isoform 1
[Vitis vinifera] gi|189096139|pdb|3BBO|Q Chain Q,
Homology Model For The Spinach Chloroplast 50s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
gi|147854297|emb|CAN83428.1| hypothetical protein
VITISV_034871 [Vitis vinifera]
gi|297736841|emb|CBI26042.3| unnamed protein product
[Vitis vinifera]
Length = 161
Score = 68.2 bits (165), Expect = 1e-09
Identities = 39/71 (54%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Frame = +1
Query: 160 STFIGGQLLFFRPN---KNPLTSTHPATAVSIVAKAATRRENRTARHERIRKKVNGTPER 330
S F Q L P PL + P I AKA TRRE+RTARH RIRKKV GTPER
Sbjct: 10 SAFASSQQLPLLPKFAAAKPLLPSFPI----IEAKAKTRREDRTARHVRIRKKVEGTPER 65
Query: 331 PRMSIYRSNKH 363
PR+ ++RSNKH
Sbjct: 66 PRLCVFRSNKH 76
>gb|ESW10584.1| hypothetical protein PHAVU_009G221700g [Phaseolus vulgaris]
Length = 161
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +1
Query: 244 IVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
+ AK TRRE+RTARH RIRKKV GTPERPR+S++RSNKH
Sbjct: 37 VEAKVRTRREDRTARHTRIRKKVEGTPERPRLSVFRSNKH 76
>ref|XP_004297049.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 159
Score = 67.8 bits (164), Expect = 1e-09
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = +1
Query: 163 TFIGG-QLLFFRPNKNPLTSTHPAT-AVSIVAKAATRRENRTARHERIRKKVNGTPERPR 336
+F+G Q L+ RP +++ P + ++ I AKA T+RE+RTARH RIRKKV GT ERPR
Sbjct: 6 SFVGSSQQLWMRPKFVGVSAPKPQSQSLVIEAKATTKREDRTARHIRIRKKVEGTTERPR 65
Query: 337 MSIYRSNKH 363
+ ++RSNKH
Sbjct: 66 LCVFRSNKH 74
>ref|XP_002314349.1| predicted protein [Populus trichocarpa]
gi|566257383|ref|XP_006388561.1| ribosomal protein L18
[Populus trichocarpa] gi|118487426|gb|ABK95541.1|
unknown [Populus trichocarpa]
gi|550310400|gb|ERP47475.1| ribosomal protein L18
[Populus trichocarpa]
Length = 165
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +1
Query: 238 VSIVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
V++ AKA TRRE+RTARH RIRKKV GTP+RPR+ ++RSNKH
Sbjct: 39 VTVEAKAKTRREDRTARHIRIRKKVEGTPDRPRLCVFRSNKH 80
>ref|XP_003546534.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Glycine
max]
Length = 162
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +1
Query: 244 IVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
+ AK TRRE+RTARH RIRKKV GTPERPR+S++RSNKH
Sbjct: 38 VEAKDRTRREDRTARHTRIRKKVEGTPERPRLSVFRSNKH 77
>gb|EXB26141.1| 50S ribosomal protein L18 [Morus notabilis]
Length = 161
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +1
Query: 244 IVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
+ AKA TR+E+R ARH RIRKKV GTPERPR+S++RSNKH
Sbjct: 37 VEAKAKTRQEDRIARHSRIRKKVEGTPERPRLSVFRSNKH 76
>gb|EPS74009.1| hypothetical protein M569_00746, partial [Genlisea aurea]
Length = 125
Score = 65.9 bits (159), Expect = 5e-09
Identities = 28/40 (70%), Positives = 35/40 (87%)
Frame = +1
Query: 244 IVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
+ A++ TRRE+R ARH RIRKKV GTPERPR+S++RSNKH
Sbjct: 1 VAAQSRTRREDRAARHSRIRKKVEGTPERPRLSVFRSNKH 40
>gb|EOY31693.1| Ribosomal L18p/L5e family protein isoform 2 [Theobroma cacao]
Length = 139
Score = 65.9 bits (159), Expect = 5e-09
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +1
Query: 160 STFIGGQLLFFRPNKNPLTSTHPATAVSIVAKAATRRENRTARHERIRKKVNGTPERPRM 339
S+F+G L P +P + P+ +++ AKA TRRE+ ARH RIRKKV GTP+RPR+
Sbjct: 27 SSFLGVSLSPRLPCPHP---SLPSILLNVQAKARTRREDCQARHSRIRKKVEGTPDRPRL 83
Query: 340 SIYRSNKH 363
++RSNKH
Sbjct: 84 CVFRSNKH 91
>gb|EOY31692.1| Ribosomal L18p/L5e family protein isoform 1 [Theobroma cacao]
Length = 176
Score = 65.9 bits (159), Expect = 5e-09
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +1
Query: 160 STFIGGQLLFFRPNKNPLTSTHPATAVSIVAKAATRRENRTARHERIRKKVNGTPERPRM 339
S+F+G L P +P + P+ +++ AKA TRRE+ ARH RIRKKV GTP+RPR+
Sbjct: 27 SSFLGVSLSPRLPCPHP---SLPSILLNVQAKARTRREDCQARHSRIRKKVEGTPDRPRL 83
Query: 340 SIYRSNKH 363
++RSNKH
Sbjct: 84 CVFRSNKH 91
>ref|XP_006586621.1| PREDICTED: uncharacterized protein LOC100306308 isoform X1 [Glycine
max]
Length = 162
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/56 (60%), Positives = 41/56 (73%)
Frame = +1
Query: 196 PNKNPLTSTHPATAVSIVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
PN P +H V + AK TRRE+R+ARH RIRKKV GTPERPR+S++RSNKH
Sbjct: 24 PNPKP---SHSLPFV-LEAKDRTRREDRSARHTRIRKKVEGTPERPRLSVFRSNKH 75
>ref|NP_001236805.1| uncharacterized protein LOC100306308 [Glycine max]
gi|255628163|gb|ACU14426.1| unknown [Glycine max]
Length = 160
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/56 (60%), Positives = 41/56 (73%)
Frame = +1
Query: 196 PNKNPLTSTHPATAVSIVAKAATRRENRTARHERIRKKVNGTPERPRMSIYRSNKH 363
PN P +H V + AK TRRE+R+ARH RIRKKV GTPERPR+S++RSNKH
Sbjct: 24 PNPKP---SHSLPFV-LEAKDRTRREDRSARHTRIRKKVEGTPERPRLSVFRSNKH 75