BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00007987
         (351 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006393423.1| hypothetical protein EUTSA_v10011822mg [Eutr...   108   6e-22
ref|XP_002891426.1| ribosomal protein L18 family protein [Arabid...   108   9e-22
ref|XP_006306511.1| hypothetical protein CARUB_v10012508mg [Caps...   107   2e-21
ref|XP_002270819.1| PREDICTED: 50S ribosomal protein L18, chloro...   107   2e-21
ref|XP_006349873.1| PREDICTED: 50S ribosomal protein L18, chloro...   106   3e-21
ref|XP_004252957.1| PREDICTED: 50S ribosomal protein L18, chloro...   106   3e-21
gb|EOY31693.1| Ribosomal L18p/L5e family protein isoform 2 [Theo...   106   4e-21
gb|EOY31692.1| Ribosomal L18p/L5e family protein isoform 1 [Theo...   106   4e-21
ref|NP_175268.1| 50S ribosomal protein L18/L5e family protein [A...   106   4e-21
ref|XP_004297049.1| PREDICTED: 50S ribosomal protein L18, chloro...   105   5e-21
ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloro...   104   1e-20
ref|XP_006848386.1| hypothetical protein AMTR_s00013p00209880 [A...   103   2e-20
ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precu...   103   2e-20
ref|XP_002314349.1| predicted protein [Populus trichocarpa] gi|5...   102   5e-20
ref|XP_003595392.1| 50S ribosomal protein L18 [Medicago truncatu...   102   7e-20
gb|ACJ84202.1| unknown [Medicago truncatula]                          102   7e-20
ref|XP_003595391.1| 50S ribosomal protein L18 [Medicago truncatu...   102   7e-20
gb|EMJ27162.1| hypothetical protein PRUPE_ppa012509mg [Prunus pe...   100   2e-19
ref|XP_002334329.1| predicted protein [Populus trichocarpa]           100   3e-19
ref|XP_006478532.1| PREDICTED: 50S ribosomal protein L18, chloro...    99   7e-19

>ref|XP_006393423.1| hypothetical protein EUTSA_v10011822mg [Eutrema salsugineum]
           gi|557090001|gb|ESQ30709.1| hypothetical protein
           EUTSA_v10011822mg [Eutrema salsugineum]
          Length = 173

 Score =  108 bits (271), Expect = 6e-22
 Identities = 55/94 (58%), Positives = 70/94 (74%), Gaps = 4/94 (4%)
 Frame = +3

Query: 78  TGRSTFLGGQL----LFFQPNKNPFTSTLPATAISIVAKVTTRRENRTARHERIRKKVNG 245
           T RS FLG  L    +F +P  +  + +L + ++ + +K  T  E+R ARH RIRKKVNG
Sbjct: 14  TNRSAFLGSGLQRRAVFLKPWSSSSSFSLQSRSLVVESKTKTSSEDRIARHSRIRKKVNG 73

Query: 246 TSERPRMCIYRSNKHLYVQVIDDSKMHTLASAST 347
           T+ERPRMC++RSNKHLYVQVIDD+KMHTLASAST
Sbjct: 74  TTERPRMCVFRSNKHLYVQVIDDTKMHTLASAST 107


>ref|XP_002891426.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337268|gb|EFH67685.1| ribosomal protein
           L18 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score =  108 bits (269), Expect = 9e-22
 Identities = 56/91 (61%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
 Frame = +3

Query: 78  TGRSTFLGGQLLFFQPNKNPFTST-LPATAISIVAKVTTRRENRTARHERIRKKVNGTSE 254
           T RSTFLG  L        P++S+ L + ++ + AK  T  E+R ARH RIRKKVNGT+E
Sbjct: 14  TNRSTFLGSGLQHRAVFLKPWSSSSLQSRSMVVEAKTKTSSEDRIARHSRIRKKVNGTTE 73

Query: 255 RPRMCIYRSNKHLYVQVIDDSKMHTLASAST 347
           RPR+C++RSNKHLYVQVIDD+KMHTLASAST
Sbjct: 74  RPRLCVFRSNKHLYVQVIDDTKMHTLASAST 104


>ref|XP_006306511.1| hypothetical protein CARUB_v10012508mg [Capsella rubella]
           gi|482575222|gb|EOA39409.1| hypothetical protein
           CARUB_v10012508mg [Capsella rubella]
          Length = 171

 Score =  107 bits (267), Expect = 2e-21
 Identities = 56/94 (59%), Positives = 71/94 (75%), Gaps = 4/94 (4%)
 Frame = +3

Query: 78  TGRSTFLGGQL----LFFQPNKNPFTSTLPATAISIVAKVTTRRENRTARHERIRKKVNG 245
           T RS FLG  L    +F +P  +  +S+L + ++ + +K  T  E+R ARH RIRKKVNG
Sbjct: 14  TNRSAFLGNGLQHRAVFLKPWSS--SSSLQSRSLVVESKTKTSSEDRIARHSRIRKKVNG 71

Query: 246 TSERPRMCIYRSNKHLYVQVIDDSKMHTLASAST 347
           T+ERPR+C++RSNKHLYVQVIDDSKMHTLASAST
Sbjct: 72  TTERPRLCVFRSNKHLYVQVIDDSKMHTLASAST 105


>ref|XP_002270819.1| PREDICTED: 50S ribosomal protein L18, chloroplastic isoform 1
           [Vitis vinifera] gi|189096139|pdb|3BBO|Q Chain Q,
           Homology Model For The Spinach Chloroplast 50s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
           gi|147854297|emb|CAN83428.1| hypothetical protein
           VITISV_034871 [Vitis vinifera]
           gi|297736841|emb|CBI26042.3| unnamed protein product
           [Vitis vinifera]
          Length = 161

 Score =  107 bits (266), Expect = 2e-21
 Identities = 58/89 (65%), Positives = 64/89 (71%)
 Frame = +3

Query: 84  RSTFLGGQLLFFQPNKNPFTSTLPATAISIVAKVTTRRENRTARHERIRKKVNGTSERPR 263
           +S F   Q L   P        LP+  I I AK  TRRE+RTARH RIRKKV GT ERPR
Sbjct: 9   QSAFASSQQLPLLPKFAAAKPLLPSFPI-IEAKAKTRREDRTARHVRIRKKVEGTPERPR 67

Query: 264 MCIYRSNKHLYVQVIDDSKMHTLASASTM 350
           +C++RSNKHLYVQVIDDSKMHTLASASTM
Sbjct: 68  LCVFRSNKHLYVQVIDDSKMHTLASASTM 96


>ref|XP_006349873.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Solanum
           tuberosum]
          Length = 162

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/66 (75%), Positives = 57/66 (86%)
 Frame = +3

Query: 153 PATAISIVAKVTTRRENRTARHERIRKKVNGTSERPRMCIYRSNKHLYVQVIDDSKMHTL 332
           P   +++ AK  TRRE+RTARH RIRKKV GT ERPRMC++RSNKH+YVQVIDDSKMHTL
Sbjct: 32  PIRVLTVEAKAKTRREDRTARHIRIRKKVEGTPERPRMCVFRSNKHIYVQVIDDSKMHTL 91

Query: 333 ASASTM 350
           ASASTM
Sbjct: 92  ASASTM 97


>ref|XP_004252957.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Solanum
           lycopersicum]
          Length = 162

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/66 (75%), Positives = 57/66 (86%)
 Frame = +3

Query: 153 PATAISIVAKVTTRRENRTARHERIRKKVNGTSERPRMCIYRSNKHLYVQVIDDSKMHTL 332
           P   +++ AK  TRRE+RTARH RIRKKV GT ERPRMC++RSNKH+YVQVIDDSKMHTL
Sbjct: 32  PIRVLTVEAKAKTRREDRTARHIRIRKKVEGTPERPRMCVFRSNKHIYVQVIDDSKMHTL 91

Query: 333 ASASTM 350
           ASASTM
Sbjct: 92  ASASTM 97


>gb|EOY31693.1| Ribosomal L18p/L5e family protein isoform 2 [Theobroma cacao]
          Length = 139

 Score =  106 bits (264), Expect = 4e-21
 Identities = 55/88 (62%), Positives = 67/88 (76%)
 Frame = +3

Query: 87  STFLGGQLLFFQPNKNPFTSTLPATAISIVAKVTTRRENRTARHERIRKKVNGTSERPRM 266
           S+FLG  L    P  +P   +LP+  +++ AK  TRRE+  ARH RIRKKV GT +RPR+
Sbjct: 27  SSFLGVSLSPRLPCPHP---SLPSILLNVQAKARTRREDCQARHSRIRKKVEGTPDRPRL 83

Query: 267 CIYRSNKHLYVQVIDDSKMHTLASASTM 350
           C++RSNKHLYVQVIDDSKMHTLASASTM
Sbjct: 84  CVFRSNKHLYVQVIDDSKMHTLASASTM 111


>gb|EOY31692.1| Ribosomal L18p/L5e family protein isoform 1 [Theobroma cacao]
          Length = 176

 Score =  106 bits (264), Expect = 4e-21
 Identities = 55/88 (62%), Positives = 67/88 (76%)
 Frame = +3

Query: 87  STFLGGQLLFFQPNKNPFTSTLPATAISIVAKVTTRRENRTARHERIRKKVNGTSERPRM 266
           S+FLG  L    P  +P   +LP+  +++ AK  TRRE+  ARH RIRKKV GT +RPR+
Sbjct: 27  SSFLGVSLSPRLPCPHP---SLPSILLNVQAKARTRREDCQARHSRIRKKVEGTPDRPRL 83

Query: 267 CIYRSNKHLYVQVIDDSKMHTLASASTM 350
           C++RSNKHLYVQVIDDSKMHTLASASTM
Sbjct: 84  CVFRSNKHLYVQVIDDSKMHTLASASTM 111


>ref|NP_175268.1| 50S ribosomal protein L18/L5e family protein [Arabidopsis thaliana]
           gi|73621536|sp|Q9SX68.1|RK18_ARATH RecName: Full=50S
           ribosomal protein L18, chloroplastic; AltName:
           Full=CL18; Flags: Precursor
           gi|5733872|gb|AAD49760.1|AC007932_8 Similar to 50S
           Ribosomal protein L18 from Thermotoga maritima
           gb|AE001798. ESTs gb|AI993387, gb|T75951 and gb|T22182
           come from this gene [Arabidopsis thaliana]
           gi|12484209|gb|AAG54003.1|AF336922_1 putative ribosomal
           protein L18 [Arabidopsis thaliana]
           gi|110740956|dbj|BAE98573.1| hypothetical protein
           [Arabidopsis thaliana] gi|332194156|gb|AEE32277.1| 50S
           ribosomal protein L18/L5e family protein [Arabidopsis
           thaliana]
          Length = 170

 Score =  106 bits (264), Expect = 4e-21
 Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = +3

Query: 78  TGRSTFLGGQLLFFQPNKNPFTST-LPATAISIVAKVTTRRENRTARHERIRKKVNGTSE 254
           T RS FLG  L        P++S+ L + ++ + AK  T  E+R ARH RIRKKVNGT+E
Sbjct: 14  TNRSAFLGNGLQHRAVFLKPWSSSSLQSRSMVVEAKTKTSSEDRIARHSRIRKKVNGTTE 73

Query: 255 RPRMCIYRSNKHLYVQVIDDSKMHTLASAST 347
           RPR+C++RSNKHLYVQVIDD+KMHTLASAST
Sbjct: 74  RPRLCVFRSNKHLYVQVIDDTKMHTLASAST 104


>ref|XP_004297049.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 159

 Score =  105 bits (263), Expect = 5e-21
 Identities = 55/89 (61%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
 Frame = +3

Query: 90  TFLGG-QLLFFQPNKNPFTSTLPAT-AISIVAKVTTRRENRTARHERIRKKVNGTSERPR 263
           +F+G  Q L+ +P     ++  P + ++ I AK TT+RE+RTARH RIRKKV GT+ERPR
Sbjct: 6   SFVGSSQQLWMRPKFVGVSAPKPQSQSLVIEAKATTKREDRTARHIRIRKKVEGTTERPR 65

Query: 264 MCIYRSNKHLYVQVIDDSKMHTLASASTM 350
           +C++RSNKHLYVQVIDD+KMHTLASASTM
Sbjct: 66  LCVFRSNKHLYVQVIDDTKMHTLASASTM 94


>ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
           sativus] gi|449498793|ref|XP_004160635.1| PREDICTED: 50S
           ribosomal protein L18, chloroplastic-like [Cucumis
           sativus]
          Length = 170

 Score =  104 bits (259), Expect = 1e-20
 Identities = 50/72 (69%), Positives = 60/72 (83%)
 Frame = +3

Query: 135 PFTSTLPATAISIVAKVTTRRENRTARHERIRKKVNGTSERPRMCIYRSNKHLYVQVIDD 314
           P TS+    ++ + AK TTRRE+RTARH RIRKKV GT+ERPR+ ++RSNKHLYVQVIDD
Sbjct: 34  PTTSSSGRHSLVVEAKATTRREDRTARHSRIRKKVEGTTERPRLSVFRSNKHLYVQVIDD 93

Query: 315 SKMHTLASASTM 350
           SKMHTLA+ STM
Sbjct: 94  SKMHTLAAVSTM 105


>ref|XP_006848386.1| hypothetical protein AMTR_s00013p00209880 [Amborella trichopoda]
           gi|548851692|gb|ERN09967.1| hypothetical protein
           AMTR_s00013p00209880 [Amborella trichopoda]
          Length = 164

 Score =  103 bits (258), Expect = 2e-20
 Identities = 49/74 (66%), Positives = 58/74 (78%)
 Frame = +3

Query: 129 KNPFTSTLPATAISIVAKVTTRRENRTARHERIRKKVNGTSERPRMCIYRSNKHLYVQVI 308
           + P  +      + I AK  TRRENR ARHERIRKKV G+ ERPR+C++RSNKH+YVQVI
Sbjct: 26  RTPLFALKRTPLLRIDAKAATRRENRVARHERIRKKVEGSPERPRLCVFRSNKHMYVQVI 85

Query: 309 DDSKMHTLASASTM 350
           DDSKMHTLA+ASTM
Sbjct: 86  DDSKMHTLAAASTM 99


>ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precursor, putative [Ricinus
           communis] gi|223549811|gb|EEF51299.1| 50S ribosomal
           protein L18, chloroplast precursor, putative [Ricinus
           communis]
          Length = 164

 Score =  103 bits (257), Expect = 2e-20
 Identities = 53/77 (68%), Positives = 58/77 (75%)
 Frame = +3

Query: 120 QPNKNPFTSTLPATAISIVAKVTTRRENRTARHERIRKKVNGTSERPRMCIYRSNKHLYV 299
           +PN  P     P   + I A   TRRENRTARH RIRKKV GT ERPR+ ++RSNKHLYV
Sbjct: 26  RPNPTPIQ---PPRFLRIEANTKTRRENRTARHVRIRKKVEGTPERPRLSVFRSNKHLYV 82

Query: 300 QVIDDSKMHTLASASTM 350
           QVIDDSKMHTLASASTM
Sbjct: 83  QVIDDSKMHTLASASTM 99


>ref|XP_002314349.1| predicted protein [Populus trichocarpa]
           gi|566257383|ref|XP_006388561.1| ribosomal protein L18
           [Populus trichocarpa] gi|118487426|gb|ABK95541.1|
           unknown [Populus trichocarpa]
           gi|550310400|gb|ERP47475.1| ribosomal protein L18
           [Populus trichocarpa]
          Length = 165

 Score =  102 bits (254), Expect = 5e-20
 Identities = 47/62 (75%), Positives = 56/62 (90%)
 Frame = +3

Query: 165 ISIVAKVTTRRENRTARHERIRKKVNGTSERPRMCIYRSNKHLYVQVIDDSKMHTLASAS 344
           +++ AK  TRRE+RTARH RIRKKV GT +RPR+C++RSNKHLYVQVIDD+KMHTLASAS
Sbjct: 39  VTVEAKAKTRREDRTARHIRIRKKVEGTPDRPRLCVFRSNKHLYVQVIDDTKMHTLASAS 98

Query: 345 TM 350
           TM
Sbjct: 99  TM 100


>ref|XP_003595392.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|355484440|gb|AES65643.1| 50S ribosomal protein L18
           [Medicago truncatula]
          Length = 136

 Score =  102 bits (253), Expect = 7e-20
 Identities = 50/80 (62%), Positives = 64/80 (80%)
 Frame = +3

Query: 111 LFFQPNKNPFTSTLPATAISIVAKVTTRRENRTARHERIRKKVNGTSERPRMCIYRSNKH 290
           LF  P  NP +S+   +++S V + TTRRE+R ARH R+RKK+ GT ERPR+ ++RSNKH
Sbjct: 25  LFTIPTPNPNSSS---SSLSFVVQATTRREDRIARHVRLRKKIEGTPERPRLSVFRSNKH 81

Query: 291 LYVQVIDDSKMHTLASASTM 350
           L+VQVIDD+KMHTLASASTM
Sbjct: 82  LFVQVIDDTKMHTLASASTM 101


>gb|ACJ84202.1| unknown [Medicago truncatula]
          Length = 166

 Score =  102 bits (253), Expect = 7e-20
 Identities = 50/80 (62%), Positives = 64/80 (80%)
 Frame = +3

Query: 111 LFFQPNKNPFTSTLPATAISIVAKVTTRRENRTARHERIRKKVNGTSERPRMCIYRSNKH 290
           LF  P  NP +S+   +++S V + TTRRE+R ARH R+RKK+ GT ERPR+ ++RSNKH
Sbjct: 25  LFTIPTPNPNSSS---SSLSFVVQATTRREDRIARHVRLRKKIEGTPERPRLSVFRSNKH 81

Query: 291 LYVQVIDDSKMHTLASASTM 350
           L+VQVIDD+KMHTLASASTM
Sbjct: 82  LFVQVIDDTKMHTLASASTM 101


>ref|XP_003595391.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|124360326|gb|ABN08339.1| Ribosomal protein L18
           [Medicago truncatula] gi|355484439|gb|AES65642.1| 50S
           ribosomal protein L18 [Medicago truncatula]
           gi|388519743|gb|AFK47933.1| unknown [Medicago
           truncatula]
          Length = 166

 Score =  102 bits (253), Expect = 7e-20
 Identities = 50/80 (62%), Positives = 64/80 (80%)
 Frame = +3

Query: 111 LFFQPNKNPFTSTLPATAISIVAKVTTRRENRTARHERIRKKVNGTSERPRMCIYRSNKH 290
           LF  P  NP +S+   +++S V + TTRRE+R ARH R+RKK+ GT ERPR+ ++RSNKH
Sbjct: 25  LFTIPTPNPNSSS---SSLSFVVQATTRREDRIARHVRLRKKIEGTPERPRLSVFRSNKH 81

Query: 291 LYVQVIDDSKMHTLASASTM 350
           L+VQVIDD+KMHTLASASTM
Sbjct: 82  LFVQVIDDTKMHTLASASTM 101


>gb|EMJ27162.1| hypothetical protein PRUPE_ppa012509mg [Prunus persica]
          Length = 166

 Score =  100 bits (250), Expect = 2e-19
 Identities = 54/96 (56%), Positives = 69/96 (71%), Gaps = 9/96 (9%)
 Frame = +3

Query: 90  TFLG-----GQLLFFQPNKNPFTSTLP----ATAISIVAKVTTRRENRTARHERIRKKVN 242
           +FLG      Q L+ +P     T+TL     + ++ + AK TT+RE+RTARH RIRKKV 
Sbjct: 6   SFLGTAIASSQQLWLRPKLVGVTTTLSPRPQSQSLVVEAKATTKREDRTARHIRIRKKVE 65

Query: 243 GTSERPRMCIYRSNKHLYVQVIDDSKMHTLASASTM 350
           GT ERPR+ ++RSNKH+Y QVIDD+KMHTLASASTM
Sbjct: 66  GTPERPRLAVFRSNKHIYAQVIDDTKMHTLASASTM 101


>ref|XP_002334329.1| predicted protein [Populus trichocarpa]
          Length = 165

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 47/58 (81%), Positives = 53/58 (91%)
 Frame = +3

Query: 177 AKVTTRRENRTARHERIRKKVNGTSERPRMCIYRSNKHLYVQVIDDSKMHTLASASTM 350
           AK  TRRE+RTARH RIRKKV GT +RPR+C++RSNKHLYVQVIDD+KMHTLASASTM
Sbjct: 43  AKPQTRREDRTARHIRIRKKVEGTPDRPRLCVFRSNKHLYVQVIDDTKMHTLASASTM 100


>ref|XP_006478532.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Citrus
           sinensis]
          Length = 171

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 44/54 (81%), Positives = 52/54 (96%)
 Frame = +3

Query: 189 TRRENRTARHERIRKKVNGTSERPRMCIYRSNKHLYVQVIDDSKMHTLASASTM 350
           T+RE+RTARH RIRKK++GT ERPR+C++RSNKHLYVQVIDD+KMHTLASASTM
Sbjct: 53  TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTM 106