BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00007945
         (5069 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY22700.1| Clp ATPase isoform 1 [Theobroma cacao]                1186   0.0  
ref|XP_002446394.1| hypothetical protein SORBIDRAFT_06g015220 [S...  1176   0.0  
ref|XP_004975521.1| PREDICTED: chaperone protein ClpD2, chloropl...  1163   0.0  
ref|NP_001169550.1| uncharacterized protein LOC100383428 [Zea ma...  1163   0.0  
ref|XP_002318194.1| ERD1 family protein [Populus trichocarpa] gi...  1162   0.0  
sp|Q7XL03.2|CLPD2_ORYSJ RecName: Full=Chaperone protein ClpD2, c...  1161   0.0  
emb|CAH66527.1| H0502B11.7 [Oryza sativa Indica Group]               1161   0.0  
ref|XP_006485047.1| PREDICTED: chaperone protein ClpD, chloropla...  1158   0.0  
ref|XP_006844754.1| hypothetical protein AMTR_s00016p00256360 [A...  1157   0.0  
ref|XP_002283802.2| PREDICTED: chaperone protein ClpD, chloropla...  1155   0.0  
ref|XP_002511055.1| ERD1 protein, chloroplast precursor, putativ...  1154   0.0  
gb|AAN78327.1| ATP-dependent Clp protease ATP-binding subunit pr...  1153   0.0  
ref|XP_003579667.1| PREDICTED: chaperone protein ClpD2, chloropl...  1153   0.0  
ref|XP_004235865.1| PREDICTED: chaperone protein ClpD, chloropla...  1151   0.0  
ref|XP_006341444.1| PREDICTED: chaperone protein ClpD, chloropla...  1149   0.0  
gb|EEC77225.1| hypothetical protein OsI_15769 [Oryza sativa Indi...  1149   0.0  
ref|XP_006341443.1| PREDICTED: chaperone protein ClpD, chloropla...  1148   0.0  
ref|XP_002864094.1| hypothetical protein ARALYDRAFT_495173 [Arab...  1148   0.0  
gb|AFJ66170.1| hypothetical protein 11M19.14 [Arabidopsis halleri]   1147   0.0  
ref|NP_001046997.1| Os02g0526400 [Oryza sativa Japonica Group] g...  1144   0.0  

>gb|EOY22700.1| Clp ATPase isoform 1 [Theobroma cacao]
          Length = 944

 Score = 1186 bits (3067), Expect = 0.0
 Identities = 609/870 (70%), Positives = 720/870 (82%), Gaps = 16/870 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERAIKAVI SQREA+++GK+MVF QHLLLGL+ E+R   GFLGSG+ ID+AREAV
Sbjct: 77   FERFTERAIKAVILSQREAKSLGKDMVFTQHLLLGLIGEDRDPNGFLGSGIKIDKAREAV 136

Query: 4470 REIW------------NXXXXXXXXXXXATDVPFSTSSKRVFEAAVDFSRSMGCNFVGPE 4327
            R IW            +           +TDVPFS S+KRVFEAAV++SR+MG NF+ PE
Sbjct: 137  RSIWQSSNPDSGEDTGSRSGKQEGSIVSSTDVPFSISTKRVFEAAVEYSRTMGYNFIAPE 196

Query: 4326 HIAIGLFNADDGSAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLASSQKIKEKPSA 4147
            HIAIGL   DDGSA +VLKRLGAD++ LA  A+++LQ ELAKDGREP   S+K++EK  +
Sbjct: 197  HIAIGLLTVDDGSAGRVLKRLGADLNHLADAAVTRLQGELAKDGREPSVPSKKMREKSLS 256

Query: 4146 TKSTSLRSQEKG----PLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPI 3979
              +T LRS +K      L  FCVDLTA A EGLIDP+IGR+TE+QR+VQILCRRTKNNPI
Sbjct: 257  GNATVLRSPDKARGKSALAQFCVDLTARAIEGLIDPVIGRETEVQRVVQILCRRTKNNPI 316

Query: 3978 LLGDAGVGKTAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLI 3799
            LLG++GVGKTAIAEGLA+ IAE + P+FL+ KRIMSLD+GLL+AGAKERGELE RVT L+
Sbjct: 317  LLGESGVGKTAIAEGLAISIAEAETPAFLLNKRIMSLDIGLLMAGAKERGELEARVTALL 376

Query: 3798 SEVQKSGDVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEH 3619
            SE  KSGDVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKP LGRGELQCIASTT+ E+
Sbjct: 377  SETIKSGDVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPALGRGELQCIASTTIGEY 436

Query: 3618 KTHFEKDKALARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSAR 3439
            +T FEKDKALARRFQPV INEPSQEDAV+ILLGLREKYE HH C +TL+AINAAVYLSAR
Sbjct: 437  RTQFEKDKALARRFQPVWINEPSQEDAVRILLGLREKYEFHHHCRYTLEAINAAVYLSAR 496

Query: 3438 YIADRHLPDKAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVS 3259
            YI DR+LPDKAIDLIDEAGSRAR++AF                +YWQEIR VQAMH +V 
Sbjct: 497  YIPDRYLPDKAIDLIDEAGSRARIEAFKRKREQETGILSKAPNDYWQEIRTVQAMHEVVM 556

Query: 3258 ESKLTYSADKTIKEDQSLDLEIPMSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQIN 3079
             ++L +  D    ED S +L   +  SP + +++E I VG EEIA +AS+WSGIPVQQI 
Sbjct: 557  ANRLKHD-DGASNEDDSSEL---LLESPLTSDNDEPIMVGPEEIAAIASVWSGIPVQQIT 612

Query: 3078 ADERKLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKT 2899
            ADER LL+GLDE+L+KRVIGQD+AV+AISRAVKRSRVGLKDPDRPIAAM+FCGPTGVGKT
Sbjct: 613  ADERVLLLGLDEQLKKRVIGQDEAVAAISRAVKRSRVGLKDPDRPIAAMIFCGPTGVGKT 672

Query: 2898 ELTKALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFT 2719
            ELTKALAA YFGSE++MLRLDMSEYMERHTVSKLIGSPPGY+GY EGG LTEA+RRRPFT
Sbjct: 673  ELTKALAACYFGSEDAMLRLDMSEYMERHTVSKLIGSPPGYVGYEEGGMLTEAIRRRPFT 732

Query: 2718 VILLDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRRSI 2539
            ++LLDEIEKAHPDIFNILLQ+FEDGHLTDSQGRRVSFKN L+VMTSNVGS AI+KGR   
Sbjct: 733  LLLLDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALVVMTSNVGSSAIAKGRHGS 792

Query: 2538 GFFVAEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQ 2359
              F+ ED +  SYA MK +VMEE+KAYFRPELLNRIDEVV+FRSLE+ QMLEI N+ML++
Sbjct: 793  IGFLLEDDKSTSYAGMKALVMEELKAYFRPELLNRIDEVVVFRSLEKAQMLEIVNLMLQE 852

Query: 2358 VRSRLSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPG 2179
            V++R+ SLGIGL+VS++I +L+CEQG+D+++GARPLRRA+ S++ED +SEA+LAG+Y+PG
Sbjct: 853  VKARIMSLGIGLEVSESIKDLICEQGYDQTFGARPLRRAVTSIVEDPLSEALLAGDYRPG 912

Query: 2178 DTITLDIDATGNPTVSQLTSDHIIQLSDAA 2089
            +T  +D+DA+GNP V+ + SD  I LSD A
Sbjct: 913  ETAVIDLDASGNPIVT-IRSDRNISLSDTA 941


>ref|XP_002446394.1| hypothetical protein SORBIDRAFT_06g015220 [Sorghum bicolor]
            gi|241937577|gb|EES10722.1| hypothetical protein
            SORBIDRAFT_06g015220 [Sorghum bicolor]
          Length = 939

 Score = 1176 bits (3042), Expect = 0.0
 Identities = 609/868 (70%), Positives = 718/868 (82%), Gaps = 12/868 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERA+KAV+FSQREAR MG E V   HLLLGLVAE+R+LVGFLGSG+ +D+AREA 
Sbjct: 73   FERFTERAVKAVVFSQREARGMGDETVAPHHLLLGLVAEDRTLVGFLGSGLRVDRAREAC 132

Query: 4470 REIWNXXXXXXXXXXXATDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAIGLFNADDG 4291
            R+              ATDVPFS++SKRVFEAAV+FSR+MGCNF+ PEHIA+GLF+ DD 
Sbjct: 133  RDALGKPGPAQAATGMATDVPFSSASKRVFEAAVEFSRNMGCNFISPEHIALGLFDLDDP 192

Query: 4290 SAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLA-SSQKIKEKPSATKSTSL----- 4129
            +  ++LK LGAD S+LA  AL+++Q ELAKDGREP+  SS K++EK +A    S      
Sbjct: 193  TTNRILKSLGADPSQLAKQALNRVQGELAKDGREPVGLSSFKVREKSAAGAGKSAIVKYS 252

Query: 4128 -RSQEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGDAGVGK 3952
             + +EK  L  FCVDLT  A  GLIDP+IGR  EI R+VQI+CRRTKNNPILLG+AGVGK
Sbjct: 253  NKKKEKSALAQFCVDLTMRASGGLIDPVIGRKEEIGRVVQIICRRTKNNPILLGEAGVGK 312

Query: 3951 TAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQKSGDV 3772
            TAIAEGLAL+IA+GD+P FL+ KRI+SLDV LL+AGAKERGELE R+T L+ EV+K+GDV
Sbjct: 313  TAIAEGLALKIADGDVPIFLVGKRILSLDVALLMAGAKERGELEARITSLLREVRKAGDV 372

Query: 3771 ILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHFEKDKA 3592
            +LFIDEVHTLIGSG  GRG+KG+GLDIANLLKP L RGELQCIASTTLDEH+ HFEKDKA
Sbjct: 373  MLFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARGELQCIASTTLDEHRLHFEKDKA 432

Query: 3591 LARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIADRHLPD 3412
            LARRFQPV +NEPSQEDAVKILLGLREKYE++HKC +TL+ INAAVYLSARYI DRHLPD
Sbjct: 433  LARRFQPVFVNEPSQEDAVKILLGLREKYEAYHKCKYTLEGINAAVYLSARYIPDRHLPD 492

Query: 3411 KAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKLTYSAD 3232
            KAIDLIDEAGSRARM++F                +YWQEIRAVQ+MH +   ++L YS D
Sbjct: 493  KAIDLIDEAGSRARMESFKRKKEEQCSILSKSPDQYWQEIRAVQSMHEVALTNRLKYSLD 552

Query: 3231 KTIKEDQ-SLDL----EIPMSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINADER 3067
            +  KED  S+++    +I   S P +  D E I V +EEIA V SLWSGIPVQ++ AD+ 
Sbjct: 553  ENEKEDGVSIEVIGENKIASPSMPPTSVD-EPILVDSEEIARVTSLWSGIPVQKLTADDT 611

Query: 3066 KLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTK 2887
            K+LVGLD+ELRKRVIGQDDAV AISRAVKRSRVGL DPDRPIA +LFCGPTGVGKTELTK
Sbjct: 612  KILVGLDDELRKRVIGQDDAVVAISRAVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTK 671

Query: 2886 ALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVILL 2707
            ALAASYFGSE +M+RLDMSEYMERHTVSKLIGSPPGY+G+GEGGTLTEAVRR+PFTV+LL
Sbjct: 672  ALAASYFGSEAAMVRLDMSEYMERHTVSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLL 731

Query: 2706 DEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRRSIGFFV 2527
            DEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGS +IS GRRSIGF  
Sbjct: 732  DEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISSGRRSIGFST 791

Query: 2526 AEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQVRSR 2347
             +DTE  +YA MK++VMEE+KA+FRPELLNR+DEVV+FR LE+TQM+ I N++L++V+SR
Sbjct: 792  QKDTEETTYAVMKSLVMEELKAFFRPELLNRLDEVVVFRPLEKTQMMAILNLILQEVKSR 851

Query: 2346 LSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGDTIT 2167
            L +LGIGL++SD++ NL+ +QG+DRSYGARPLRRA+  L+EDVISEAIL G +KPGDTI 
Sbjct: 852  LLALGIGLEISDSMKNLISQQGYDRSYGARPLRRAVTQLVEDVISEAILFGQFKPGDTIL 911

Query: 2166 LDIDATGNPTVSQLTSDHIIQLSDAA*T 2083
            +D DATG P +S+L +D  +QLSD A T
Sbjct: 912  MDTDATGKPCLSRL-NDQTVQLSDPAPT 938


>ref|XP_004975521.1| PREDICTED: chaperone protein ClpD2, chloroplastic-like [Setaria
            italica]
          Length = 942

 Score = 1163 bits (3008), Expect = 0.0
 Identities = 602/867 (69%), Positives = 705/867 (81%), Gaps = 11/867 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERA+KAV+FSQREAR MG E V   HLLLGLVAE+RS  GFLGSG+ +++AREA 
Sbjct: 76   FERFTERAVKAVVFSQREARGMGDEAVAPHHLLLGLVAEDRSPAGFLGSGIRVERAREAC 135

Query: 4470 REIWNXXXXXXXXXXXATDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAIGLFNADDG 4291
            R+              ATDVPFS +SKRVFEAAV+FSR+M CNF+ PEHIA+GLFN  D 
Sbjct: 136  RDALGKPGPAQAATGLATDVPFSAASKRVFEAAVEFSRNMACNFISPEHIALGLFNLGDP 195

Query: 4290 SAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLA-SSQKIKEKPSATKST------S 4132
            +   VLK LGAD S+L   A  ++Q ELAKDGREP+  SS K++EK +A          S
Sbjct: 196  TTNSVLKSLGADPSQLTKQAFGRVQGELAKDGREPVGLSSFKLREKSAAGAGKTAIVKYS 255

Query: 4131 LRSQEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGDAGVGK 3952
             + +EK  L  FCVDLT  A  GLIDP+IGR  EI+R+VQI+CRRTKNNPILLG+AGVGK
Sbjct: 256  NKKKEKSALAQFCVDLTMRASGGLIDPVIGRKEEIERVVQIICRRTKNNPILLGEAGVGK 315

Query: 3951 TAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQKSGDV 3772
            TAIAEGLAL+IA GD+P FL+ KRI+SLDV LL+AGAKERGELE R+T L+ EV+K+GDV
Sbjct: 316  TAIAEGLALKIANGDVPIFLVGKRILSLDVALLMAGAKERGELEARITSLLREVRKAGDV 375

Query: 3771 ILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHFEKDKA 3592
            +LFIDEVHTLIGSG  GRG+KG+GLDIANLLKP L RGELQCIASTTLDEH+ HFEKDKA
Sbjct: 376  MLFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARGELQCIASTTLDEHRLHFEKDKA 435

Query: 3591 LARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIADRHLPD 3412
            LARRFQPV +NEPSQEDAVKILLGLR+KYE++HKC +TL+ INAAVYLSARYI DRHLPD
Sbjct: 436  LARRFQPVFVNEPSQEDAVKILLGLRDKYETYHKCKYTLEGINAAVYLSARYIPDRHLPD 495

Query: 3411 KAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKLTYSAD 3232
            KAIDLIDEAGSRARM++F                EYWQEIRAVQ+MH +   ++L YS D
Sbjct: 496  KAIDLIDEAGSRARMESFKKKKEEQCSILSKSPDEYWQEIRAVQSMHEVALTNRLKYSLD 555

Query: 3231 KTIKED----QSLDLEIPMSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINADERK 3064
            +   +D    + +D +   S      + +E I V +EEIA V SLWSGIPVQ++ ADE K
Sbjct: 556  ENDTDDNVNTEVIDEDKIASPLTPPTSVDEPILVDSEEIARVTSLWSGIPVQKLTADETK 615

Query: 3063 LLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKA 2884
            LLVGLD+ELRKRVIGQDDAV AIS+AVKRSRVGL DPDRPIA +LFCGPTGVGKTELTKA
Sbjct: 616  LLVGLDDELRKRVIGQDDAVVAISKAVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKA 675

Query: 2883 LAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVILLD 2704
            LAASYFGSE +M+RLDMSEYMERHTVSKLIGSPPGY+G+GEGGTLTEAVRR+PFTV+LLD
Sbjct: 676  LAASYFGSESAMVRLDMSEYMERHTVSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLLD 735

Query: 2703 EIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRRSIGFFVA 2524
            EIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGS +IS GRRSIGF   
Sbjct: 736  EIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSASISSGRRSIGFSTQ 795

Query: 2523 EDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQVRSRL 2344
            +DTE  +YASMK++VMEE+KA+FRPELLNR+DEVV+FR LE+TQM+ I NI+L++V+SRL
Sbjct: 796  KDTEDTTYASMKSLVMEELKAFFRPELLNRMDEVVVFRPLEKTQMMAILNIILQEVKSRL 855

Query: 2343 SSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGDTITL 2164
             +LGIGL++SD++ NL+ +QG+DRSYGARPLRRA+  L+ED ISEAIL G +KPGDTI +
Sbjct: 856  LALGIGLEISDSMKNLISQQGYDRSYGARPLRRAVTQLVEDAISEAILFGQFKPGDTILM 915

Query: 2163 DIDATGNPTVSQLTSDHIIQLSDAA*T 2083
            D DATG P +S+L +D  +QLSD A T
Sbjct: 916  DTDATGKPCLSRL-NDQTVQLSDPATT 941


>ref|NP_001169550.1| uncharacterized protein LOC100383428 [Zea mays]
            gi|224030061|gb|ACN34106.1| unknown [Zea mays]
            gi|414587415|tpg|DAA37986.1| TPA: hypothetical protein
            ZEAMMB73_897347 [Zea mays]
          Length = 932

 Score = 1163 bits (3008), Expect = 0.0
 Identities = 602/870 (69%), Positives = 713/870 (81%), Gaps = 14/870 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERA+KAV+FSQREAR MG + V   HLLLGL+AE+R+LVGFLGSG+ +++AREA 
Sbjct: 66   FERFTERAVKAVVFSQREARGMGDDTVAPHHLLLGLIAEDRTLVGFLGSGLRVERAREAC 125

Query: 4470 REIWNXXXXXXXXXXXATDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAIGLFNADDG 4291
            R+              ATDVPFS +SKRVFEAAV+FSR++GCNF+ PEHIA+GLF+ DD 
Sbjct: 126  RDALGKAGPAQAATGLATDVPFSAASKRVFEAAVEFSRNIGCNFISPEHIALGLFDLDDP 185

Query: 4290 SAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLA-SSQKIKEKPSATKSTSL----- 4129
            +  ++LK LGAD S+LA  AL ++Q ELAKDGREP+  SS K++E+ +A    S      
Sbjct: 186  TTNRILKSLGADPSQLAKQALKRVQGELAKDGREPVGLSSFKVRERSAAGAGKSAIVKYS 245

Query: 4128 -RSQEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGDAGVGK 3952
             + +EK  L  FCVDLT  A  GLIDP+IGR  EI+R+VQI+CRRTKNNPILLG+AGVGK
Sbjct: 246  NKKKEKSALAQFCVDLTMRASGGLIDPVIGRKEEIERVVQIICRRTKNNPILLGEAGVGK 305

Query: 3951 TAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQKSGDV 3772
            TAIAEGLAL+IA GD+P FL+ KRI+SLDV LL+AGAKERGELE R+T L+ EV+K+GDV
Sbjct: 306  TAIAEGLALKIANGDVPIFLVGKRILSLDVALLMAGAKERGELEARITSLLREVRKAGDV 365

Query: 3771 ILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHFEKDKA 3592
            +LFIDEVHTLIGSG  GRG+KG+GLDIANLLKP L RGELQCIASTTLDEH+ HFEKDKA
Sbjct: 366  MLFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALSRGELQCIASTTLDEHRLHFEKDKA 425

Query: 3591 LARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIADRHLPD 3412
            LARRFQPVL+NEPSQEDAVKILLGLREKYE++HKC +TL+ INAAVYLSARYI DRHLPD
Sbjct: 426  LARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYTLEGINAAVYLSARYIPDRHLPD 485

Query: 3411 KAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKLTYSAD 3232
            KAIDLIDEAGSRARM++F                EYWQEIRAVQ+ H +   ++L YS D
Sbjct: 486  KAIDLIDEAGSRARMESFKRKKEEQCSILSKSPDEYWQEIRAVQSTHEVALANRLKYSLD 545

Query: 3231 KTIKEDQSLDLEI-------PMSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINAD 3073
            +  K+D  +++E+         S  P+S++  E I VG+EEIA V SLWSGIPVQ++ AD
Sbjct: 546  ENDKDD-GVNIEVIGDNKIASPSMPPTSVD--EPILVGSEEIARVTSLWSGIPVQKLTAD 602

Query: 3072 ERKLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTEL 2893
            E KLLVGLD+ELRKRVIGQDDAV AISRAVKRSRVGL DPDRPIA +LFCGPTGVGKTEL
Sbjct: 603  ETKLLVGLDDELRKRVIGQDDAVVAISRAVKRSRVGLNDPDRPIATLLFCGPTGVGKTEL 662

Query: 2892 TKALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVI 2713
            TKALAASYFGSE +M+RLDMSEYMERH VSKLIGSPPGY+G+GEGGTLTEAVRR PFTV+
Sbjct: 663  TKALAASYFGSESAMIRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVRRTPFTVV 722

Query: 2712 LLDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRRSIGF 2533
            LLDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGS +IS GRRSIGF
Sbjct: 723  LLDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISSGRRSIGF 782

Query: 2532 FVAEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQVR 2353
                DTE  +YA+MK++VMEE+KA+FRPELLNR+DEVV+F  LE+TQM+ I N++L++V+
Sbjct: 783  STQRDTEETTYAAMKSLVMEELKAFFRPELLNRLDEVVVFHPLEKTQMMAILNLILQEVK 842

Query: 2352 SRLSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGDT 2173
            SRL +LGIGL+VS+++  L+ +QG+DRSYGARPLRRA+  L+EDVISEAIL G +KPGDT
Sbjct: 843  SRLLALGIGLEVSESMKILISQQGYDRSYGARPLRRAVTQLVEDVISEAILFGQFKPGDT 902

Query: 2172 ITLDIDATGNPTVSQLTSDHIIQLSDAA*T 2083
            I +  DATG P +S+L +D  +QLSD A T
Sbjct: 903  ILMGTDATGKPCLSRL-NDQTVQLSDTAPT 931


>ref|XP_002318194.1| ERD1 family protein [Populus trichocarpa] gi|222858867|gb|EEE96414.1|
            ERD1 family protein [Populus trichocarpa]
          Length = 948

 Score = 1162 bits (3006), Expect = 0.0
 Identities = 598/868 (68%), Positives = 713/868 (82%), Gaps = 14/868 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERAIKAV+FSQREARA+GK+MVF QHLLLGL+ E+R   GFLGSG+ ID+ARE V
Sbjct: 82   FERFTERAIKAVVFSQREARALGKDMVFTQHLLLGLIIEDRDPNGFLGSGIKIDKAREVV 141

Query: 4470 REIW---------NXXXXXXXXXXXATDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIA 4318
            + IW         +            +DVPFS S+KRVFEAA+++SR+MG NF+ PEHIA
Sbjct: 142  KSIWQRESDSAEASELVSKGERGVSHSDVPFSASTKRVFEAAIEYSRTMGHNFIAPEHIA 201

Query: 4317 IGLFNADDGSAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLASSQKIKEKPSATKS 4138
            IGLF  DDGSA +VL RLG D   LA++A++KLQ EL KDGREP   S+    K  + ++
Sbjct: 202  IGLFTVDDGSAGRVLNRLGVDGDALAAIAITKLQGELVKDGREPSVESKGKHGKSVSKRA 261

Query: 4137 TSLRS----QEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLG 3970
             +LRS    +EK  L  FCVDLTA A EG IDP+IGR +EI+RIVQILCRRTKNNPILLG
Sbjct: 262  AALRSYEKTKEKSALAQFCVDLTARASEGRIDPVIGRHSEIERIVQILCRRTKNNPILLG 321

Query: 3969 DAGVGKTAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEV 3790
            ++GVGKTAIAEGLA++IA+ DIP FL+EKR+MSLDVGLL+AGAKERGELE RVT LI E+
Sbjct: 322  ESGVGKTAIAEGLAIKIAQADIPVFLLEKRVMSLDVGLLIAGAKERGELEARVTSLIREI 381

Query: 3789 QKSGDVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTH 3610
            QK GDVILFIDEVHTL+G+GTVGRGNKGSGLDIAN+LKP LGRGELQCIASTTLDE++TH
Sbjct: 382  QKEGDVILFIDEVHTLVGTGTVGRGNKGSGLDIANILKPSLGRGELQCIASTTLDEYRTH 441

Query: 3609 FEKDKALARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIA 3430
            FE DKALARRFQPVLINEPSQEDA++ILLGLR++YE+HH C FT +AINAAV+LSARYIA
Sbjct: 442  FEIDKALARRFQPVLINEPSQEDAIRILLGLRQRYEAHHNCRFTPEAINAAVHLSARYIA 501

Query: 3429 DRHLPDKAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESK 3250
            DR+LPDKAIDLIDEAGSRAR++A+                +YWQEIR VQAMH +V  S+
Sbjct: 502  DRYLPDKAIDLIDEAGSRARIEAYRRKKEQQTFILSKTPDDYWQEIRTVQAMHEVVLASR 561

Query: 3249 LTYSADKTIKEDQSLDLEIPMSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINADE 3070
            L      +   D S ++ I  S  P+S N +E   VG ++IA VASLWSGIPVQQ+ ADE
Sbjct: 562  LANDCSLS-SMDGSGEITIESSLPPAS-NADEPAVVGPDDIAAVASLWSGIPVQQLTADE 619

Query: 3069 RKLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELT 2890
            RK LVGL+EELRKRVIGQD+AV+AISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELT
Sbjct: 620  RKFLVGLEEELRKRVIGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELT 679

Query: 2889 KALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVIL 2710
            KALA +YFGSE +MLRLDMSEYMERHTVSKLIG+PPGY+GYG+GG LTE++R++PFTV+L
Sbjct: 680  KALARNYFGSESAMLRLDMSEYMERHTVSKLIGAPPGYVGYGKGGILTESIRKQPFTVVL 739

Query: 2709 LDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISK-GRRSIGF 2533
            LDEIEKAHPDIFNILLQ+FEDGHLTDSQGRRVSFKN L+VMTSNVGS AI+K GR SIGF
Sbjct: 740  LDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALVVMTSNVGSAAIAKGGRASIGF 799

Query: 2532 FVAEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQVR 2353
             + ED E +SYA+M++++MEE+K YFRPELLNRIDEVV+F  LE+ QML+I N+ML++V+
Sbjct: 800  MI-EDNENSSYAAMQSLIMEELKGYFRPELLNRIDEVVVFHPLEKAQMLQILNLMLQEVK 858

Query: 2352 SRLSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGDT 2173
             RL SLGIGL+VS++I +L+C+QG+D+ YGARPLRRA+  +IE+ +SEA LAG YKPGDT
Sbjct: 859  ERLISLGIGLEVSESIKDLICQQGYDKFYGARPLRRAVTQVIENPLSEAFLAGQYKPGDT 918

Query: 2172 ITLDIDATGNPTVSQLTSDHIIQLSDAA 2089
              +D+DA+GNP VS+  SD  + LSD +
Sbjct: 919  AFIDLDASGNPVVSK-WSDRSMHLSDTS 945


>sp|Q7XL03.2|CLPD2_ORYSJ RecName: Full=Chaperone protein ClpD2, chloroplastic; AltName:
            Full=ATP-dependent Clp protease ATP-binding subunit ClpD
            homolog 2; AltName: Full=Casein lytic proteinase D2;
            Flags: Precursor
          Length = 937

 Score = 1161 bits (3003), Expect = 0.0
 Identities = 605/864 (70%), Positives = 714/864 (82%), Gaps = 12/864 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERA+KAV+FSQREAR MG E V   HLLLGLVAE+RS +GFL SGV +++AREA 
Sbjct: 71   FERFTERAVKAVVFSQREARGMGDETVAPHHLLLGLVAEDRSPLGFLASGVRVERAREAC 130

Query: 4470 REIWNXXXXXXXXXXXATDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAIGLFNADDG 4291
            R               ATDVPFS +SKRVFEAAV+FSR+MGCNF+ PEHIA+GLFN +D 
Sbjct: 131  RAAVGKEGLAQAPVGLATDVPFSGASKRVFEAAVEFSRNMGCNFISPEHIALGLFNLNDP 190

Query: 4290 SAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLA-SSQKIKEK--PSATKST----S 4132
            +   VLK LG D S+LA  AL+++Q ELAKDGREP+  SS K++EK  P   KS     S
Sbjct: 191  TTNNVLKSLGVDSSQLAKQALTRVQGELAKDGREPVGLSSFKVREKFTPGGGKSAIVKYS 250

Query: 4131 LRSQEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGDAGVGK 3952
             +++EK  L  FC+DLT  A  GLIDP+IGR  EI+R+VQI+CRRTKNNPILLG+AGVGK
Sbjct: 251  NKNKEKSALALFCLDLTMRASGGLIDPVIGRKDEIERVVQIICRRTKNNPILLGEAGVGK 310

Query: 3951 TAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQKSGDV 3772
            TAIAEGLA +IA GD+P FL+ KRI+SLDV LL+AGAKERGELE RVT LI EV+K+GDV
Sbjct: 311  TAIAEGLAHKIANGDVPIFLVGKRILSLDVALLMAGAKERGELEARVTSLIREVRKAGDV 370

Query: 3771 ILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHFEKDKA 3592
            ILFIDEVHTLIGSG  GRG+KG+GLDIANLLKP L RGELQCIASTTLDEH+ HF+KDKA
Sbjct: 371  ILFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARGELQCIASTTLDEHRLHFDKDKA 430

Query: 3591 LARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIADRHLPD 3412
            LARRFQPVL+NEPSQEDAVKILLGLREKYE++HKC +TL++INAAVYLSARYIADRHLPD
Sbjct: 431  LARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYTLESINAAVYLSARYIADRHLPD 490

Query: 3411 KAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKLTYSAD 3232
            KAIDLIDEAGSRARM++F                EYWQEIRAVQ MH +   +K+ YS +
Sbjct: 491  KAIDLIDEAGSRARMESFKRKKEEQCSILSKSPDEYWQEIRAVQNMHEVALTNKVKYSLN 550

Query: 3231 KTIKEDQSLDLEI--PMSSSPSSL---NDNEKIFVGTEEIATVASLWSGIPVQQINADER 3067
            +  +ED ++D+E+     +SP+S+   + ++   VG+EEIA V SLWSGIPVQQ+ ADER
Sbjct: 551  QNDQED-AVDIELVGEDKTSPASMLSTSTDKPSLVGSEEIARVTSLWSGIPVQQLTADER 609

Query: 3066 KLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTK 2887
            KLLVGLD+ELRKRVIGQDDAV AIS+AVKRSRVGL DPDRPIA ++FCGPTGVGKTELTK
Sbjct: 610  KLLVGLDDELRKRVIGQDDAVLAISKAVKRSRVGLNDPDRPIATLIFCGPTGVGKTELTK 669

Query: 2886 ALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVILL 2707
            ALAASYFGSE + +RLDMSEYMERH VSKLIGSPPGY+G+GEGGTLTEAVRR+PFTV+LL
Sbjct: 670  ALAASYFGSESATVRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLL 729

Query: 2706 DEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRRSIGFFV 2527
            DEIEKAHPDIFNILLQ+FEDGHLTDSQGRRVSFKNTLIVMTSNVGS +IS G+RSIGF  
Sbjct: 730  DEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISNGKRSIGFQT 789

Query: 2526 AEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQVRSR 2347
              DTE  SYA+MK++VMEE+KA+FRPELLNRIDEVV+F  LE+TQML I NIML++V+ R
Sbjct: 790  QTDTEEKSYAAMKSLVMEELKAFFRPELLNRIDEVVVFHPLEKTQMLAILNIMLQEVKGR 849

Query: 2346 LSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGDTIT 2167
            + +LGIGL+VSD++ +L+ + G+D+SYGARPLRRA+  L+EDVISEAIL+G +KPGDTI 
Sbjct: 850  ILALGIGLEVSDSMKDLISQHGYDKSYGARPLRRAVTQLVEDVISEAILSGQFKPGDTIM 909

Query: 2166 LDIDATGNPTVSQLTSDHIIQLSD 2095
            +D DATG P +S+L +D  +QLSD
Sbjct: 910  VDTDATGKPCLSRL-NDQTVQLSD 932


>emb|CAH66527.1| H0502B11.7 [Oryza sativa Indica Group]
          Length = 937

 Score = 1161 bits (3003), Expect = 0.0
 Identities = 605/864 (70%), Positives = 713/864 (82%), Gaps = 12/864 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERA+KAV+FSQREAR MG E V   HLLLGLVAE+RS +GFL SGV +++AREA 
Sbjct: 71   FERFTERAVKAVVFSQREARGMGDETVAPHHLLLGLVAEDRSPLGFLASGVRVERAREAC 130

Query: 4470 REIWNXXXXXXXXXXXATDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAIGLFNADDG 4291
            R               ATDVPFS +SKRVFEAAV+FSR+MGCNF+ PEHIA+GLFN +D 
Sbjct: 131  RAAVGKEGLAQAPVGLATDVPFSGASKRVFEAAVEFSRNMGCNFISPEHIALGLFNLNDP 190

Query: 4290 SAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLA-SSQKIKEK--PSATKST----S 4132
            +   VLK LG D S+LA  AL+++Q ELAKDGREP+  SS K++EK  P   KS     S
Sbjct: 191  TTNNVLKSLGVDSSQLAKQALTRVQGELAKDGREPVGLSSFKVREKFTPGGGKSAIVKYS 250

Query: 4131 LRSQEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGDAGVGK 3952
             + +EK  L  FC+DLT  A  GLIDP+IGR  EI+R+VQI+CRRTKNNPILLG+AGVGK
Sbjct: 251  NKKKEKSALALFCLDLTMRASGGLIDPVIGRKDEIERVVQIICRRTKNNPILLGEAGVGK 310

Query: 3951 TAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQKSGDV 3772
            TAIAEGLA +IA GD+P FL+ KRI+SLDV LL+AGAKERGELE RVT LI EV+K+GDV
Sbjct: 311  TAIAEGLAHKIANGDVPIFLVGKRILSLDVALLMAGAKERGELEARVTSLIREVRKAGDV 370

Query: 3771 ILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHFEKDKA 3592
            ILFIDEVHTLIGSG  GRG+KG+GLDIANLLKP L RGELQCIASTTLDEH+ HF+KDKA
Sbjct: 371  ILFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARGELQCIASTTLDEHRLHFDKDKA 430

Query: 3591 LARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIADRHLPD 3412
            LARRFQPVL+NEPSQEDAVKILLGLREKYE++HKC +TL++INAAVYLSARYIADRHLPD
Sbjct: 431  LARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYTLESINAAVYLSARYIADRHLPD 490

Query: 3411 KAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKLTYSAD 3232
            KAIDLIDEAGSRARM++F                EYWQEIRAVQ MH +   +K+ YS +
Sbjct: 491  KAIDLIDEAGSRARMESFKRKKEEQCSILSKSPDEYWQEIRAVQNMHEVALTNKVKYSLN 550

Query: 3231 KTIKEDQSLDLEI--PMSSSPSSL---NDNEKIFVGTEEIATVASLWSGIPVQQINADER 3067
            +  +ED ++D+E+     +SP+S+   + ++   VG+EEIA V SLWSGIPVQQ+ ADER
Sbjct: 551  QNDQED-AVDIELVGEDKTSPASMLSTSTDKPSLVGSEEIARVTSLWSGIPVQQLTADER 609

Query: 3066 KLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTK 2887
            KLLVGLD+ELRKRVIGQDDAV AIS+AVKRSRVGL DPDRPIA ++FCGPTGVGKTELTK
Sbjct: 610  KLLVGLDDELRKRVIGQDDAVLAISKAVKRSRVGLNDPDRPIATLIFCGPTGVGKTELTK 669

Query: 2886 ALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVILL 2707
            ALAASYFGSE + +RLDMSEYMERH VSKLIGSPPGY+G+GEGGTLTEAVRR+PFTV+LL
Sbjct: 670  ALAASYFGSESATVRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLL 729

Query: 2706 DEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRRSIGFFV 2527
            DEIEKAHPDIFNILLQ+FEDGHLTDSQGRRVSFKNTLIVMTSNVGS +IS G+RSIGF  
Sbjct: 730  DEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISNGKRSIGFQT 789

Query: 2526 AEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQVRSR 2347
              DTE  SYA+MK++VMEE+KA+FRPELLNRIDEVV+F  LE+TQML I NIML++V+ R
Sbjct: 790  QTDTEEKSYAAMKSLVMEELKAFFRPELLNRIDEVVVFHPLEKTQMLAILNIMLQEVKGR 849

Query: 2346 LSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGDTIT 2167
            + +LGIGL+VSD++ +L+ + G+D+SYGARPLRRA+  L+EDVISEAIL+G +KPGDTI 
Sbjct: 850  ILALGIGLEVSDSMKDLISQHGYDKSYGARPLRRAVTQLVEDVISEAILSGQFKPGDTIM 909

Query: 2166 LDIDATGNPTVSQLTSDHIIQLSD 2095
            +D DATG P +S+L +D  +QLSD
Sbjct: 910  MDTDATGKPCLSRL-NDQTVQLSD 932


>ref|XP_006485047.1| PREDICTED: chaperone protein ClpD, chloroplastic-like [Citrus
            sinensis]
          Length = 945

 Score = 1158 bits (2996), Expect = 0.0
 Identities = 601/864 (69%), Positives = 713/864 (82%), Gaps = 12/864 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERA+KAVIFSQREA+++GK+MVF QHLLLGL+AE+R   GFL SG+TID+AREAV
Sbjct: 82   FERFTERAVKAVIFSQREAKSLGKDMVFTQHLLLGLIAEDRHPNGFLESGITIDKAREAV 141

Query: 4470 REIWNXXXXXXXXXXXA--------TDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAI 4315
              IW+           A          +PFS S+KRVFEAAV++SRS G NF+ PEHIA+
Sbjct: 142  VSIWHSTNNQDTDDAAAQGKPFSSAAKMPFSISTKRVFEAAVEYSRSRGYNFIAPEHIAL 201

Query: 4314 GLFNADDGSAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLASSQKIKEKPSATKST 4135
            GLF  DDGSA +VLKRLG D++ LA+VA+S+LQ ELAK+GREP + ++ ++E   + K+ 
Sbjct: 202  GLFTVDDGSAGRVLKRLGVDVNHLAAVAVSRLQGELAKEGREP-SLAKGVRENSISGKTA 260

Query: 4134 SLRSQEK---GPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGDA 3964
            +L+S  +     L  FCVDLTA A E LIDP+IGR+TEIQRI+QILCRRTKNNPILLG++
Sbjct: 261  ALKSPGRTRASALEQFCVDLTARASEELIDPVIGRETEIQRIIQILCRRTKNNPILLGES 320

Query: 3963 GVGKTAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQK 3784
            GVGKTAIAEGLA+RI + ++P FL+ KRIMSLD+GLL+AGAKERGELE RVT LISE+QK
Sbjct: 321  GVGKTAIAEGLAIRIVQAEVPVFLLSKRIMSLDMGLLMAGAKERGELEARVTTLISEIQK 380

Query: 3783 SGDVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHFE 3604
            SGDVILFIDEVHTLIGSGTVGRGNKG+GLDI+NLLKP LGRGELQCIASTT DEH+T FE
Sbjct: 381  SGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFE 440

Query: 3603 KDKALARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIADR 3424
            KDKALARRFQPVLI+EPSQEDAV+ILLGLREKYE+HH C FTL+AINAAV+LSARYI+DR
Sbjct: 441  KDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSARYISDR 500

Query: 3423 HLPDKAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKLT 3244
            +LPDKAIDL+DEAGSRA ++ F                +YWQEIR VQAMH +V  S+L 
Sbjct: 501  YLPDKAIDLVDEAGSRAHIELFKRKKEQQTCILSKPPDDYWQEIRTVQAMHEVVQGSRLK 560

Query: 3243 YSADKTIKEDQSLDLEIPMSSS-PSSLNDNEKIFVGTEEIATVASLWSGIPVQQINADER 3067
            Y        D S   EI + SS PS+ +D+E   VG ++IA VASLWSGIPVQQI ADER
Sbjct: 561  YDDVVASMGDTS---EIVVESSLPSASDDDEPAVVGPDDIAAVASLWSGIPVQQITADER 617

Query: 3066 KLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTK 2887
             LLVGL+E+L+KRVIGQD+AV+AISRAVKRSRVGLKDP+RP AAMLFCGPTGVGKTEL K
Sbjct: 618  MLLVGLEEQLKKRVIGQDEAVAAISRAVKRSRVGLKDPNRPTAAMLFCGPTGVGKTELAK 677

Query: 2886 ALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVILL 2707
            +LAA YFGSE SMLRLDMSEYMERHTVSKLIGSPPGY+GY EGG LTEA+RRRPFT++LL
Sbjct: 678  SLAACYFGSESSMLRLDMSEYMERHTVSKLIGSPPGYVGYEEGGLLTEAIRRRPFTLLLL 737

Query: 2706 DEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRRSIGFFV 2527
            DEIEKAHPDIFNILLQVFEDGHLTDS GRRVSFKN LIVMTSNVGS  I+KGR     F+
Sbjct: 738  DEIEKAHPDIFNILLQVFEDGHLTDSHGRRVSFKNALIVMTSNVGSTTIAKGRHGSIGFL 797

Query: 2526 AEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQVRSR 2347
             ED E  SYA MKT+V+EE+KAYFRPELLNRIDEVV+FRSLE+ Q+LEI ++ML++V++R
Sbjct: 798  LEDNESTSYAGMKTLVVEELKAYFRPELLNRIDEVVVFRSLEKAQILEILSLMLQEVKAR 857

Query: 2346 LSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGDTIT 2167
            L SLGIGL+VSD+I + +C+QG+D++YGARPLRRA+ S+IED++SEA+LAG+YKPGDT  
Sbjct: 858  LISLGIGLEVSDSIKDFICQQGYDQAYGARPLRRAVTSIIEDLLSEAVLAGDYKPGDTAI 917

Query: 2166 LDIDATGNPTVSQLTSDHIIQLSD 2095
            +D+DA+G P V    SD+  +LSD
Sbjct: 918  IDLDASGKPYVRN-RSDNSAKLSD 940


>ref|XP_006844754.1| hypothetical protein AMTR_s00016p00256360 [Amborella trichopoda]
            gi|548847225|gb|ERN06429.1| hypothetical protein
            AMTR_s00016p00256360 [Amborella trichopoda]
          Length = 969

 Score = 1157 bits (2992), Expect = 0.0
 Identities = 605/875 (69%), Positives = 713/875 (81%), Gaps = 24/875 (2%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERAIKAV+FSQ+EA+++GK+MVF QHLLLGL+AE+RS  GFLGSG+TI++AREAV
Sbjct: 95   FERFTERAIKAVMFSQKEAKSLGKDMVFTQHLLLGLIAEDRSSDGFLGSGITIEKAREAV 154

Query: 4470 REIWNXXXXXXXXXXXA---TDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAIGLFNA 4300
              IW+           A   TDVPFS SSKRVFEAAV++SR+M  N+V PEHIA+GLF  
Sbjct: 155  VNIWSESSTPMADLGGAASATDVPFSLSSKRVFEAAVEYSRNMNYNYVAPEHIAVGLFTV 214

Query: 4299 DDGSAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLASSQKIKEKPSATKST----S 4132
            DDGSA +V++RLG D   LAS+A+++LQ ELAKDGREP  SS K +EK +  KS+    S
Sbjct: 215  DDGSALKVIERLGVDPDHLASIAVTRLQGELAKDGREPSISSNKPREKSTPGKSSISRVS 274

Query: 4131 LRSQEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGDAGVGK 3952
             R +EK  L+ FCVDLTA A EGLIDP+IGRD E+ R++QIL RRTKNNPILLG+ GVGK
Sbjct: 275  DRRKEKSALSQFCVDLTAQAGEGLIDPVIGRDKELNRVIQILGRRTKNNPILLGEPGVGK 334

Query: 3951 TAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQKSGDV 3772
            TAIAEGLA  I  G++P FL  KRIMSLD+GLL+AGAKERGELE RV  ++SE+QK G++
Sbjct: 335  TAIAEGLANHILNGEVPLFLSGKRIMSLDIGLLMAGAKERGELEARVNNILSEIQKEGNI 394

Query: 3771 ILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHFEKDKA 3592
            ILFIDEVHTLIGSG+V  G KGSGLDIANLLKP LGRG LQC+ASTT+DEH+ HFEKDKA
Sbjct: 395  ILFIDEVHTLIGSGSVKAG-KGSGLDIANLLKPSLGRGGLQCMASTTVDEHRQHFEKDKA 453

Query: 3591 LARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIADRHLPD 3412
            LARRFQPVLINEPSQEDAVKILLGLREKYESHH C FTL+AINAAV+LSARYIADRHLPD
Sbjct: 454  LARRFQPVLINEPSQEDAVKILLGLREKYESHHNCRFTLEAINAAVHLSARYIADRHLPD 513

Query: 3411 KAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKLTYSAD 3232
            KAIDLIDEAGSRARM+AF                EYWQEIRAVQA+   V  +K TYS +
Sbjct: 514  KAIDLIDEAGSRARMNAFRRRKEQQTSILSKSPTEYWQEIRAVQALQEQVLANKNTYSLN 573

Query: 3231 KTIKEDQSLDLEI------------PMSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQ 3088
                 D S D  +            P  + P S ++NE + VG ++IA VASLWSGIPVQ
Sbjct: 574  -----DDSGDSSVMVPGVKSEVDPAPEPNVPGSSDENEPVMVGPDDIAAVASLWSGIPVQ 628

Query: 3087 QINADERKLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGV 2908
            Q+ A+E+ +L GLDE+L+ RVIGQD+AVSAISRAVKRSR+GLKDP+RPIAAMLFCGPTGV
Sbjct: 629  QLTANEQMMLYGLDEQLQNRVIGQDEAVSAISRAVKRSRIGLKDPNRPIAAMLFCGPTGV 688

Query: 2907 GKTELTKALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRR 2728
            GKTELTKALAASYFGSE++M+RLDMSE+ME HTVSKLIGSPPGY+GYGEGGTLTEAVRR+
Sbjct: 689  GKTELTKALAASYFGSEDAMIRLDMSEFMEAHTVSKLIGSPPGYVGYGEGGTLTEAVRRK 748

Query: 2727 PFTVILLDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISK-G 2551
            PFTVILLDEIEKAHP IFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGS +I+K G
Sbjct: 749  PFTVILLDEIEKAHPQIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSIAKGG 808

Query: 2550 RRSIGFFVAEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNI 2371
            R +IGF +A+D E +SY+++K +VMEE+KA+FRPELLNRIDEVV FR LE+ QMLEI N+
Sbjct: 809  RNTIGFLIADDKESSSYSAIKALVMEELKAFFRPELLNRIDEVVTFRPLEKRQMLEILNL 868

Query: 2370 MLEQVRSRLSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGN 2191
            ML +V++RL SLG+GL+VS+AI +L+CEQG+DRSYGARPLRRA+  L+EDV+SEA+L G 
Sbjct: 869  MLREVKTRLLSLGVGLEVSEAIKDLICEQGYDRSYGARPLRRAVTLLVEDVLSEALLTGE 928

Query: 2190 YKPGDTITLDIDATGNPTVSQL----TSDHIIQLS 2098
            YK GDT  +D+D+TGNP V++      SDH +  S
Sbjct: 929  YKQGDTALIDVDSTGNPFVTRHENPDRSDHNMHFS 963


>ref|XP_002283802.2| PREDICTED: chaperone protein ClpD, chloroplastic-like [Vitis
            vinifera] gi|147770910|emb|CAN67541.1| hypothetical
            protein VITISV_012383 [Vitis vinifera]
            gi|302142786|emb|CBI20081.3| unnamed protein product
            [Vitis vinifera]
          Length = 946

 Score = 1155 bits (2988), Expect = 0.0
 Identities = 599/869 (68%), Positives = 714/869 (82%), Gaps = 15/869 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERAIKAVIFSQREA+A+G+ MVF QHLLLGLVAE+RSL GFLGSG+TID AR+AV
Sbjct: 78   FERFTERAIKAVIFSQREAKALGRNMVFTQHLLLGLVAEDRSLDGFLGSGITIDDARDAV 137

Query: 4470 REIWNXXXXXXXXXXXA---------TDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIA 4318
            R IW+                     TDVPFS S+KRVFEAA+++SR+MG NF+ PEHIA
Sbjct: 138  RSIWHDYNDSSIISGIPSSQTSVASSTDVPFSISTKRVFEAAIEYSRTMGYNFIAPEHIA 197

Query: 4317 IGLFNADDGSAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLASSQKIKEKPSATKS 4138
            IGLF  DDGSA +VLKRLGA+++ LA+VA+S+LQ ELAKDG EP A+ + ++ K  + K+
Sbjct: 198  IGLFTVDDGSAGRVLKRLGANVNHLAAVAVSRLQGELAKDGSEPSATFKGMQGKSFSGKA 257

Query: 4137 TSLRS----QEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLG 3970
              ++S    +EK  L  FCVDLTA A +GLIDP+IGRD E+QR+VQILCRRTKNNPILLG
Sbjct: 258  AIVKSSGKKKEKSALAQFCVDLTARATDGLIDPVIGRDMEVQRVVQILCRRTKNNPILLG 317

Query: 3969 DAGVGKTAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEV 3790
            ++GVGKTAIAEGLA+ IAE D+PSFL+ KRIMSLD+GLL+AG KERGELE RVT LIS++
Sbjct: 318  ESGVGKTAIAEGLAISIAEADVPSFLLTKRIMSLDIGLLMAGTKERGELEARVTTLISDI 377

Query: 3789 QKSGDVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTH 3610
             KSG++ILFIDEVH L+GSG  GRGNKGSGLDIA+LLKP LGRG+LQC ASTT+DE+   
Sbjct: 378  LKSGNIILFIDEVHMLVGSGIAGRGNKGSGLDIASLLKPSLGRGQLQCFASTTIDEYVKL 437

Query: 3609 FEKDKALARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIA 3430
            FEKDKALARRFQPVLINEPSQE+AV+ILLGLREKYE+HHKC FTL+AINAAV+LSARYI 
Sbjct: 438  FEKDKALARRFQPVLINEPSQEEAVRILLGLREKYEAHHKCRFTLEAINAAVHLSARYIP 497

Query: 3429 DRHLPDKAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESK 3250
            DR LPDKAIDLIDEAGS+ARM+A+                +YWQEIRAV+AMH +V  SK
Sbjct: 498  DRRLPDKAIDLIDEAGSKARMEAYKRKKEKQTSVLLKSPDDYWQEIRAVKAMHEMVMASK 557

Query: 3249 LTYSADKTIKEDQSLDL-EIPMSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINAD 3073
            L      +  ED S  L E P+   PS  +DNE I VG  EIA VASLWSGIPVQQI AD
Sbjct: 558  LKNCNGASCMEDGSTVLFESPL---PSMSDDNEPIVVGPNEIAVVASLWSGIPVQQITAD 614

Query: 3072 ERKLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTEL 2893
            ER LLVGL E+LRKRV+GQD+A+++ISRAVKRSRVGLKDP+RPIAAMLFCGPTGVGKTEL
Sbjct: 615  ERMLLVGLHEQLRKRVVGQDNAIASISRAVKRSRVGLKDPNRPIAAMLFCGPTGVGKTEL 674

Query: 2892 TKALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVI 2713
             KALAA YFGSE +M+RLDMSEYME+H+VSKLIGSPPGY+GYGEGGTLTEA+RR+PFTV+
Sbjct: 675  AKALAACYFGSEAAMVRLDMSEYMEQHSVSKLIGSPPGYVGYGEGGTLTEAIRRQPFTVV 734

Query: 2712 LLDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRR-SIG 2536
            LLDEIEKAHPDIFNILLQ+FEDGHLTDSQGRRV F+N L+VMTSNVGS AI+KGR+ SIG
Sbjct: 735  LLDEIEKAHPDIFNILLQMFEDGHLTDSQGRRVLFRNALVVMTSNVGSAAIAKGRQSSIG 794

Query: 2535 FFVAEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQV 2356
            F +A+D E  SYA MK +VMEE+KAYFRPELLNR+DE+V+F  LE+ QMLEI N ML++V
Sbjct: 795  FSIADD-EPTSYAGMKALVMEELKAYFRPELLNRLDEIVVFHPLEKAQMLEILNTMLQEV 853

Query: 2355 RSRLSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGD 2176
            + RLSSLGIG++VS ++++L+C+QG+D++YGARPLRRA+  +IED +SEA+L   Y+PGD
Sbjct: 854  KERLSSLGIGMEVSVSVIDLLCQQGYDKNYGARPLRRAVTLIIEDPLSEALLTEEYQPGD 913

Query: 2175 TITLDIDATGNPTVSQLTSDHIIQLSDAA 2089
               +D+DA+GNP V +  S+  I LSD A
Sbjct: 914  IAVVDLDASGNPFVRK-QSNRRIHLSDTA 941


>ref|XP_002511055.1| ERD1 protein, chloroplast precursor, putative [Ricinus communis]
            gi|223550170|gb|EEF51657.1| ERD1 protein, chloroplast
            precursor, putative [Ricinus communis]
          Length = 946

 Score = 1154 bits (2984), Expect = 0.0
 Identities = 593/867 (68%), Positives = 706/867 (81%), Gaps = 15/867 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERAIK VIFSQREARA+GK+MVF QHLLLGL+ E+R   GFLGSG+ ID+ARE V
Sbjct: 80   FERFTERAIKVVIFSQREARALGKDMVFTQHLLLGLIGEDRDPDGFLGSGIKIDKAREIV 139

Query: 4470 REIWNXXXXXXXXXXXAT----------DVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHI 4321
            + IW+           +T          DVPF+ S+KRVFEAAV++SR+MG NF+ PEHI
Sbjct: 140  QNIWSSDGDGTNASGSSTGKSGGGGSATDVPFAISTKRVFEAAVEYSRTMGYNFIAPEHI 199

Query: 4320 AIGLFNADDGSAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLASSQKIKEKPSATK 4141
            AIGL   DDGSA++VLKRLGA++  LA+ A+++LQ ELAK+GREP   ++  +EK    K
Sbjct: 200  AIGLLTVDDGSASRVLKRLGANLDDLATAAVARLQGELAKEGREPSVEAKGAREKSFLKK 259

Query: 4140 ----STSLRSQEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILL 3973
                S+S +++E+  L  FCVDLTA A EGLIDP+IGR+TEI+RIVQILCRRTKNNPILL
Sbjct: 260  AGALSSSEQTREESALAQFCVDLTARASEGLIDPVIGRETEIERIVQILCRRTKNNPILL 319

Query: 3972 GDAGVGKTAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISE 3793
            G++GVGKTAIAEGLA RIA+ D+P FL+ KR+MSLD+GLL+AGAKERGELE RVT LI E
Sbjct: 320  GESGVGKTAIAEGLATRIAQTDVPLFLIAKRVMSLDMGLLIAGAKERGELEARVTALIKE 379

Query: 3792 VQKSGDVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKT 3613
            + K G++ILFIDEVHT++G+GTVGRGNKGSGLDIANLLKPPLGRGELQCIASTT+DE++ 
Sbjct: 380  ILKEGNIILFIDEVHTIVGTGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTIDEYRA 439

Query: 3612 HFEKDKALARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYI 3433
            HFE DKALARRFQPV I+EPSQEDAVKILLGLR+KYE+HH C FTL+AINAAVYLSARY+
Sbjct: 440  HFEIDKALARRFQPVTIDEPSQEDAVKILLGLRQKYEAHHNCRFTLEAINAAVYLSARYV 499

Query: 3432 ADRHLPDKAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSES 3253
            ADR+LPDKAIDLIDEAGSRAR+++                 +YWQEIR VQAMH +V  S
Sbjct: 500  ADRYLPDKAIDLIDEAGSRARIESHKKKKEQQTCILSKSPDDYWQEIRTVQAMHEVVLAS 559

Query: 3252 KLTYSADKTIKEDQSLDLEIPMSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINAD 3073
            ++T+    +  +D     EI + S+   + D+E   VG ++IA VASLWSGIPVQQ+ AD
Sbjct: 560  RMTHDGSASSTDDSG---EIILKSTEHVMLDDEPTVVGPDDIAAVASLWSGIPVQQLTAD 616

Query: 3072 ERKLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTEL 2893
            ER  LVGLD+ELRKRVIGQD+AVSAIS AVKRSRVGLKDPDRPIAAM+FCGPTGVGKTEL
Sbjct: 617  ERMFLVGLDDELRKRVIGQDEAVSAISCAVKRSRVGLKDPDRPIAAMMFCGPTGVGKTEL 676

Query: 2892 TKALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVI 2713
             KALAA YFGSE +MLRLDMSEYMERHTVSKLIG+PPGY+GYGEGGTLTEA+RRRPFT++
Sbjct: 677  AKALAACYFGSESAMLRLDMSEYMERHTVSKLIGAPPGYVGYGEGGTLTEAIRRRPFTLV 736

Query: 2712 LLDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISK-GRRSIG 2536
            LLDEIEKAHPD+FNILLQ+FEDGHLTDSQGR+VSFKN L+VMTSNVGS AI+K GR SIG
Sbjct: 737  LLDEIEKAHPDVFNILLQLFEDGHLTDSQGRKVSFKNALVVMTSNVGSTAIAKGGRTSIG 796

Query: 2535 FFVAEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQV 2356
            F +A D E  SYA +K +VMEE+K YFRPELLNRIDEVV+F  LE+ QML+I ++ML +V
Sbjct: 797  FMIA-DNESTSYAGIKALVMEELKTYFRPELLNRIDEVVVFHPLEKIQMLKILSLMLREV 855

Query: 2355 RSRLSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGD 2176
            + RL SLGIGL+VS+ I  LVC+QG+D  YGARPLRRA+  +IE+ +SEA+LAG +KPGD
Sbjct: 856  KERLISLGIGLEVSETIKELVCKQGYDPVYGARPLRRAVTEIIENPVSEALLAGEFKPGD 915

Query: 2175 TITLDIDATGNPTVSQLTSDHIIQLSD 2095
            T  +D+DA+GNP V    SD  IQLSD
Sbjct: 916  TARVDLDASGNPVVIN-GSDESIQLSD 941


>gb|AAN78327.1| ATP-dependent Clp protease ATP-binding subunit precursor [Oryza
            sativa Indica Group]
          Length = 938

 Score = 1153 bits (2983), Expect = 0.0
 Identities = 608/866 (70%), Positives = 710/866 (81%), Gaps = 14/866 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERA+KAV+ SQREA+ +G+  V  +HLLLGL+AE+RS  GFL SG+ I++ARE  
Sbjct: 74   FERFTERAVKAVVLSQREAKGLGEGAVAPRHLLLGLIAEDRSAGGFLSSGINIERAREEC 133

Query: 4470 REIWNXXXXXXXXXXXAT----DVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAIGLFN 4303
            R I              +    D+PFS S KRVFE AV+FSR+MGC+F+ PEH+A+ LF 
Sbjct: 134  RGIGARDLTPGAPSPSGSGLEMDIPFSGSCKRVFEVAVEFSRNMGCSFISPEHLALALFT 193

Query: 4302 ADDGSAAQVLKRLGADMSRLASVALSKLQVELAKDGREPL-ASSQKIKEKPSATK----- 4141
             DD +   +L+ LGAD S+LASVAL++LQ ELAKDGREP  ASS K+ +K  A       
Sbjct: 194  LDDPTTNSLLRSLGADPSQLASVALTRLQAELAKDGREPAGASSFKVPKKSPAGAGRSAF 253

Query: 4140 STSLRSQ-EKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGDA 3964
            S SL S+ EKG L  FC+DLT  A  G IDPIIGR+ EI+R+VQI+CRRTKNNPILLG+A
Sbjct: 254  SKSLNSKKEKGALDQFCLDLTTQASGGFIDPIIGREEEIERVVQIICRRTKNNPILLGEA 313

Query: 3963 GVGKTAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQK 3784
            GVGKTAIAEGLALRIA GD+P +L+ KRIMSLDVGLL+AGAKERGELE+RVT LI EV++
Sbjct: 314  GVGKTAIAEGLALRIANGDVPIYLVAKRIMSLDVGLLIAGAKERGELESRVTSLIREVRE 373

Query: 3783 SGDVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHFE 3604
            +GDVILFIDEVH LIGSGTVG+G KG+GLDI NLLKPPL RGELQCIA+TTLDEH+ HFE
Sbjct: 374  AGDVILFIDEVHNLIGSGTVGKG-KGAGLDIGNLLKPPLARGELQCIAATTLDEHRMHFE 432

Query: 3603 KDKALARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIADR 3424
            KDKALARRFQPVL+ EPSQ+DAVKILLGLREKYE++HKC FTL+AINAAVYLSARYI DR
Sbjct: 433  KDKALARRFQPVLVEEPSQDDAVKILLGLREKYETYHKCKFTLEAINAAVYLSARYIPDR 492

Query: 3423 HLPDKAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKLT 3244
             LPDKAIDLIDEAGSRARM++F                EYWQEIRA Q MH +VS +++ 
Sbjct: 493  QLPDKAIDLIDEAGSRARMESFNRKKEGQSSILLKSPDEYWQEIRAAQNMHEVVSSNQMK 552

Query: 3243 YSADKTIKEDQSLDLEIP---MSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINAD 3073
            YS     +E+ S  ++ P   M+   S L   E I VGTEEIA VASLWSGIPVQQ+ AD
Sbjct: 553  YSP---CQENGSAAIKAPSEDMNELTSELQVEEPIVVGTEEIARVASLWSGIPVQQLTAD 609

Query: 3072 ERKLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTEL 2893
            +RKLLVGLD ELRKRVIGQDDAV AISRAVKRSRVGL DPDRPIA +LFCGPTGVGKTEL
Sbjct: 610  DRKLLVGLDGELRKRVIGQDDAVMAISRAVKRSRVGLNDPDRPIATLLFCGPTGVGKTEL 669

Query: 2892 TKALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVI 2713
            TKALAASYFGSE +MLRLDMSEYMERHTVSKLIGSPPGYIGYGE GTLTEAVRR+PFTV+
Sbjct: 670  TKALAASYFGSESAMLRLDMSEYMERHTVSKLIGSPPGYIGYGETGTLTEAVRRKPFTVV 729

Query: 2712 LLDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRRSIGF 2533
            LLDEIEKAHPDIFNILLQ+FEDGHL+DSQGRRVSFKNTLIVMTSNVGS +ISKGRRS+G 
Sbjct: 730  LLDEIEKAHPDIFNILLQIFEDGHLSDSQGRRVSFKNTLIVMTSNVGSTSISKGRRSMG- 788

Query: 2532 FVAEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQVR 2353
            F+ EDTE +SY +MK++VMEE+KA+FRPELLNRIDE+V+FR LE+TQML I +I+L++V+
Sbjct: 789  FMTEDTESSSYVAMKSLVMEELKAFFRPELLNRIDEMVVFRPLEKTQMLAILDIILQEVK 848

Query: 2352 SRLSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGDT 2173
             RL +LGIGL+VSDA+ +L+CE+G+D+SYGARPLRRA+  LIEDVISEAIL G YKPGDT
Sbjct: 849  GRLLALGIGLEVSDAMKDLICEEGYDKSYGARPLRRAVTHLIEDVISEAILFGEYKPGDT 908

Query: 2172 ITLDIDATGNPTVSQLTSDHIIQLSD 2095
            I +DIDA G P +S L ++ ++QLSD
Sbjct: 909  ILMDIDAAGKPCMSHL-NEKVVQLSD 933


>ref|XP_003579667.1| PREDICTED: chaperone protein ClpD2, chloroplastic-like [Brachypodium
            distachyon]
          Length = 942

 Score = 1153 bits (2982), Expect = 0.0
 Identities = 600/864 (69%), Positives = 701/864 (81%), Gaps = 12/864 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERA+KAV+ SQREAR MG E V   HLLLGLVAE+RS  GFL SGV I++AREA 
Sbjct: 76   FERFTERAVKAVVLSQREARGMGDEAVAPHHLLLGLVAEDRSAAGFLASGVRIERAREAG 135

Query: 4470 REIWNXXXXXXXXXXXATDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAIGLFNADDG 4291
            R               ATDVPFS +SKRVF AAV+FSR+MGCNF+ PEHIA+GLF+ DD 
Sbjct: 136  RAAVGKAGPAQAATGLATDVPFSGASKRVFVAAVEFSRNMGCNFISPEHIALGLFDLDDP 195

Query: 4290 SAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLA-SSQKIKEKPSATKSTSL----- 4129
            +   VLK LG D  +LA  AL+++Q ELAKDGREPL  SS K++EK +A    S      
Sbjct: 196  TTNSVLKSLGLDPRQLAKQALTRVQGELAKDGREPLGLSSFKVREKSTAGSGRSPIVRYS 255

Query: 4128 -RSQEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGDAGVGK 3952
             + +EK  L  FCVDLT  A  GLIDP+IGR+ EIQR+VQI+CRRTKNNPILLG+AGVGK
Sbjct: 256  NKKKEKSALAQFCVDLTMRASGGLIDPVIGREKEIQRVVQIICRRTKNNPILLGEAGVGK 315

Query: 3951 TAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQKSGDV 3772
            TAIAEGLA++IA GD+P FL+ KR++SLDV LL+AGA+ERGELE RVT LI EV+K+GDV
Sbjct: 316  TAIAEGLAIKIANGDVPIFLVAKRVLSLDVALLMAGARERGELEARVTSLIREVRKAGDV 375

Query: 3771 ILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHFEKDKA 3592
            ILFIDEVHTLIGSG  GRGNKGSGLDIANLLKP L RGELQCIASTTLDEH+ HFEKDKA
Sbjct: 376  ILFIDEVHTLIGSGVAGRGNKGSGLDIANLLKPALARGELQCIASTTLDEHRLHFEKDKA 435

Query: 3591 LARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIADRHLPD 3412
            LARRFQPV +NEPSQEDAVKILLGLREKYE++HKC +TL+ INAAVYLSARYI DRHLPD
Sbjct: 436  LARRFQPVYVNEPSQEDAVKILLGLREKYETYHKCKYTLEGINAAVYLSARYIPDRHLPD 495

Query: 3411 KAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKLTYSAD 3232
            KAIDLIDEAGSRARM++F                EYWQEIRAVQAMH +   ++L YS +
Sbjct: 496  KAIDLIDEAGSRARMESFKKKKEEQCSIISKSPDEYWQEIRAVQAMHEVALTNRLKYSLN 555

Query: 3231 KTIKEDQSLDLEIP-----MSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINADER 3067
            +  +E+  +D+E+      M +S  + + +E   VG+EEIA V SLWSGIPVQQ+ ADER
Sbjct: 556  ENDQEN-GVDVEVLSDGKIMPASKLAASADELSMVGSEEIARVTSLWSGIPVQQLTADER 614

Query: 3066 KLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTK 2887
            KLLVGLD+ELRKRVIGQDDAV AISRAVKRSRVG+ DP+RPIA +LFCGPTGVGKTELTK
Sbjct: 615  KLLVGLDDELRKRVIGQDDAVVAISRAVKRSRVGMSDPNRPIATLLFCGPTGVGKTELTK 674

Query: 2886 ALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVILL 2707
            ALAA YFGSE SM+RLDMSEYMERH VSKLIGSPPGY+G+GEGGTLTEAVRR+PFTV+LL
Sbjct: 675  ALAAIYFGSESSMVRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLL 734

Query: 2706 DEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRRSIGFFV 2527
            DEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGS +ISKGR SIGF  
Sbjct: 735  DEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSASISKGRMSIGFQT 794

Query: 2526 AEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQVRSR 2347
              DTE N+Y  MK++V EE+KA+FRPELLNR+DEVV+FR LE+TQML I NI+L++V+ R
Sbjct: 795  QNDTEENTYNVMKSLVTEELKAFFRPELLNRMDEVVVFRPLEKTQMLAILNIILQEVKGR 854

Query: 2346 LSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGDTIT 2167
            L +LGIGL++SDA+ N++ ++G+D+SYGARPLRRA+  L+ED ISE IL+G YKPGDTI 
Sbjct: 855  LLALGIGLQISDAMKNVISQEGYDKSYGARPLRRAVTQLVEDAISEGILSGQYKPGDTIM 914

Query: 2166 LDIDATGNPTVSQLTSDHIIQLSD 2095
            +D D  G P +S+L +D  +Q+SD
Sbjct: 915  MDADDKGKPCLSRL-NDQTVQMSD 937


>ref|XP_004235865.1| PREDICTED: chaperone protein ClpD, chloroplastic-like [Solanum
            lycopersicum]
          Length = 965

 Score = 1151 bits (2977), Expect = 0.0
 Identities = 596/873 (68%), Positives = 717/873 (82%), Gaps = 16/873 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTER+IKAV+FSQ+EA+A+GK+MV  QHLLLGL+AE+RS  GFLGS +TID+AREAV
Sbjct: 93   FERFTERSIKAVMFSQKEAKALGKDMVSTQHLLLGLIAEDRSPGGFLGSRITIDKAREAV 152

Query: 4470 REIW---------NXXXXXXXXXXXATDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIA 4318
            R IW                     ATDV FS+S+KRVFEAAV++SR+MG N++ PEHIA
Sbjct: 153  RSIWLGDSEDDTTKLGSQDSSSATSATDVAFSSSTKRVFEAAVEYSRTMGYNYIAPEHIA 212

Query: 4317 IGLFNADDGSAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLASSQKIKEKPSATKS 4138
            IGLF  DDGSA +VLKRLGA+++RLA+ A+S+LQ ELAKDGR+P+ S ++ +EK    K 
Sbjct: 213  IGLFTVDDGSAGRVLKRLGANVNRLAAEAVSRLQGELAKDGRDPI-SFKRSREKSFPGKI 271

Query: 4137 TSLRSQEKGP-----LTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILL 3973
            T  RS EK       L  FCVDLTA A EGLIDP+IGR+TE+QR+++ILCRRTKNNPILL
Sbjct: 272  TIDRSAEKAKAEKNALEQFCVDLTARASEGLIDPVIGRETEVQRMIEILCRRTKNNPILL 331

Query: 3972 GDAGVGKTAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISE 3793
            G AGVGKTAIAEGLA+ IAEG+IP+FLM+KR+MSLD+GLL++GAKERGELE RVT LI E
Sbjct: 332  GQAGVGKTAIAEGLAINIAEGNIPAFLMKKRVMSLDIGLLISGAKERGELEARVTTLIKE 391

Query: 3792 VQKSGDVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKT 3613
            V++SG +ILFIDEVHTL+G+GTVGRGNKGSGLDIANLLKP LGRGELQCIASTT+DE + 
Sbjct: 392  VKESGHIILFIDEVHTLVGAGTVGRGNKGSGLDIANLLKPTLGRGELQCIASTTMDEFRL 451

Query: 3612 HFEKDKALARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYI 3433
            H EKDKA ARRFQP+L+NEPSQ DAV+ILLGLREKYESHHKC ++L+AINAAV LS+RYI
Sbjct: 452  HIEKDKAFARRFQPILVNEPSQADAVQILLGLREKYESHHKCRYSLEAINAAVELSSRYI 511

Query: 3432 ADRHLPDKAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSES 3253
             DR+LPDKAIDLIDEAGS++RM A                 +YWQEIRAVQ MH ++  S
Sbjct: 512  PDRYLPDKAIDLIDEAGSKSRMQAHKRRKEQQISVLSQSPSDYWQEIRAVQTMHEVILAS 571

Query: 3252 KLTYSADKT-IKEDQSLDLEIPMSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINA 3076
            KLT +AD + + +D  L L+ P SSS S  + +E   VG E+IA VASLW+GIP++Q+  
Sbjct: 572  KLTENADASRLDDDSELHLQ-PASSSTS--DQHELPLVGPEDIAAVASLWTGIPLKQLTV 628

Query: 3075 DERKLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTE 2896
            DER LLVGLDE+L+KRV+GQD+AV++I RAVKRSR GLK P+RPI+AMLFCGPTGVGK+E
Sbjct: 629  DERMLLVGLDEQLKKRVVGQDEAVTSICRAVKRSRTGLKHPNRPISAMLFCGPTGVGKSE 688

Query: 2895 LTKALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTV 2716
            L KALAASYFGSE +MLRLDMSEYMERHTVSKLIGSPPGY+GYGEGGTLTEA+RR+PFTV
Sbjct: 689  LAKALAASYFGSESAMLRLDMSEYMERHTVSKLIGSPPGYVGYGEGGTLTEAIRRKPFTV 748

Query: 2715 ILLDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRR-SI 2539
            +LLDEIEKAHPDIFNILLQ+FEDGHLTDSQGRRVSFKN LIVMTSNVGS AI KGR+ +I
Sbjct: 749  VLLDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALIVMTSNVGSTAIVKGRQNTI 808

Query: 2538 GFFVAEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQ 2359
            GF +AED    SYA MK IVMEE+K YFRPELLNRIDEVV+FR LE+ QMLEI N+ML++
Sbjct: 809  GFLLAEDESAASYAGMKAIVMEELKTYFRPELLNRIDEVVVFRPLEKPQMLEILNLMLQE 868

Query: 2358 VRSRLSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPG 2179
            VR+RL SLGI L+VS+A+M+L+C+QGFDR+YGARPLRRA+  ++ED++ E++L+G++KPG
Sbjct: 869  VRARLVSLGISLEVSEAVMDLICQQGFDRNYGARPLRRAVTQMVEDLLCESVLSGDFKPG 928

Query: 2178 DTITLDIDATGNPTVSQLTSDHIIQLSDAA*TP 2080
            D   + +D +GNP V   +S   IQLSD    P
Sbjct: 929  DVAVIHLDESGNPVVVNQSSQS-IQLSDTNGNP 960


>ref|XP_006341444.1| PREDICTED: chaperone protein ClpD, chloroplastic-like isoform X2
            [Solanum tuberosum]
          Length = 964

 Score = 1149 bits (2973), Expect = 0.0
 Identities = 607/931 (65%), Positives = 735/931 (78%), Gaps = 15/931 (1%)
 Frame = -3

Query: 4827 PSYHRLTVTSASRFIAASSALPSSRRVDLRRRSYTFLPLPSTXXXXXXXXXXXXXXXXIF 4648
            PS H  T  +AS   + SS+  +   + L  R       PS+                 F
Sbjct: 42   PSSHVATTATASAACSTSSSTSTLFGISLSHR-------PSSSVSRKIKRSLYIVSGV-F 93

Query: 4647 ERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAVR 4468
            ERFTER+IKAV+FSQ+EA+A+GK+MV  QHLLLGL+AE+RS  GFLGS +TID+AREAVR
Sbjct: 94   ERFTERSIKAVMFSQKEAKALGKDMVNTQHLLLGLIAEDRSPGGFLGSRITIDKAREAVR 153

Query: 4467 EIW---------NXXXXXXXXXXXATDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAI 4315
             IW                     ATDV FS+S+KRVFEAAV++SR+MG N++ PEHIAI
Sbjct: 154  SIWLGDSEDDTAKLGSQDSASATSATDVAFSSSTKRVFEAAVEYSRTMGYNYIAPEHIAI 213

Query: 4314 GLFNADDGSAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLASSQKIKEKPSATKST 4135
            GLF  DDGSA +VLKRLGA+++RLA+ A+S+LQ ELAKDGR+P+ S ++ +EK    K T
Sbjct: 214  GLFTVDDGSAGRVLKRLGANVNRLAAEAVSRLQGELAKDGRDPI-SFKRSREKSFPGKIT 272

Query: 4134 SLRS----QEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGD 3967
              RS    +EK  L  FCVDLTA A EGLIDP+IGR+TE+QR+++ILCRRTKNNPILLG 
Sbjct: 273  IDRSAEQAKEKNALEQFCVDLTARASEGLIDPVIGRETEVQRMIEILCRRTKNNPILLGQ 332

Query: 3966 AGVGKTAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQ 3787
            AGVGKTAIAEGLA+ IAEG+IP+FLM+KR+MSLD+GLL++GAKERGELE RVT LI +V+
Sbjct: 333  AGVGKTAIAEGLAINIAEGNIPAFLMKKRVMSLDIGLLISGAKERGELEARVTTLIKDVK 392

Query: 3786 KSGDVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHF 3607
            +SG +ILFIDEVHTL+G+GTVGRGNKGSGLDIANLLKP LGRGELQCIASTT+DE + H 
Sbjct: 393  ESGHIILFIDEVHTLVGAGTVGRGNKGSGLDIANLLKPTLGRGELQCIASTTMDEFRLHI 452

Query: 3606 EKDKALARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIAD 3427
            EKDKA ARRFQP+LINEPSQ DAV+ILLGLREKYESHHKC ++L+AINAAV LS+RYI D
Sbjct: 453  EKDKAFARRFQPILINEPSQADAVQILLGLREKYESHHKCRYSLEAINAAVELSSRYIPD 512

Query: 3426 RHLPDKAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKL 3247
            R+LPDKAIDLIDEAGS++RM A                 +YWQEIRAVQ MH ++  SKL
Sbjct: 513  RYLPDKAIDLIDEAGSKSRMQAHKRRKEQQISVLSQSPSDYWQEIRAVQTMHEVILASKL 572

Query: 3246 TYSAD-KTIKEDQSLDLEIPMSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINADE 3070
            T + D   + +D  L L+ P SSS S  +++E   VG EEIA VASLW+GIP++Q+  DE
Sbjct: 573  TGNDDVSRLDDDSELHLQ-PASSSTS--DEHEPPLVGPEEIAAVASLWTGIPLKQLTVDE 629

Query: 3069 RKLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELT 2890
            R LLVGLDE+L+KRV+GQD+AV++I RAVKRSR GLK P+RPI+AMLFCGPTGVGK+EL 
Sbjct: 630  RMLLVGLDEQLKKRVVGQDEAVTSICRAVKRSRTGLKHPNRPISAMLFCGPTGVGKSELA 689

Query: 2889 KALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVIL 2710
            KALAASYFGSE +MLRLDMSEYMERHTVSKLIGSPPGY+GYGEGGTLTEA+RR+PFTV+L
Sbjct: 690  KALAASYFGSESAMLRLDMSEYMERHTVSKLIGSPPGYVGYGEGGTLTEAIRRKPFTVVL 749

Query: 2709 LDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRR-SIGF 2533
            LDEIEKAHPDIFNILLQ+FEDGHLTDSQGRRVSFKN LIVMTSNVGS AI KGR+ +IGF
Sbjct: 750  LDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALIVMTSNVGSTAIVKGRQNTIGF 809

Query: 2532 FVAEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQVR 2353
             +A+D    SYA MK IVMEE+K YFRPELLNRIDEVV+FR LE+ QMLEI N+ML++VR
Sbjct: 810  LLADDESAASYAGMKAIVMEELKTYFRPELLNRIDEVVVFRPLEKPQMLEILNLMLQEVR 869

Query: 2352 SRLSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGDT 2173
            +RL SLGI L+VS+A+M+L+C+QGFDR+YGARPLRRA+  ++ED++ E++L+G++KPGD 
Sbjct: 870  ARLVSLGISLEVSEAVMDLICQQGFDRNYGARPLRRAVTQMVEDLLCESVLSGDFKPGDV 929

Query: 2172 ITLDIDATGNPTVSQLTSDHIIQLSDAA*TP 2080
              + +D +GNP V   +S   IQLSD    P
Sbjct: 930  AMIHLDESGNPVVINQSSQS-IQLSDTNGNP 959


>gb|EEC77225.1| hypothetical protein OsI_15769 [Oryza sativa Indica Group]
          Length = 956

 Score = 1149 bits (2973), Expect = 0.0
 Identities = 605/883 (68%), Positives = 713/883 (80%), Gaps = 31/883 (3%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERA+KAV+FSQREAR MG E V   HLLLGLVAE+RS +GFL SGV +++AREA 
Sbjct: 71   FERFTERAVKAVVFSQREARGMGDETVAPHHLLLGLVAEDRSPLGFLASGVRVERAREAC 130

Query: 4470 REIWNXXXXXXXXXXXATDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAIGLFNADDG 4291
            R               ATDVPFS +SKRVFEAAV+FSR+MGCNF+ PEHIA+GLFN +D 
Sbjct: 131  RAAVGKEGLAQAPVGLATDVPFSGASKRVFEAAVEFSRNMGCNFISPEHIALGLFNLNDP 190

Query: 4290 SAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLA-SSQKIKEK--PSATKST----S 4132
            +   VLK LG D S+LA  AL+++Q ELAKDGREP+  SS K++EK  P   KS     S
Sbjct: 191  TTNNVLKSLGVDSSQLAKQALTRVQGELAKDGREPVGLSSFKVREKFTPGGGKSAIVKYS 250

Query: 4131 LRSQEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGDAGVGK 3952
             + +EK  L  FC+DLT  A  GLIDP+IGR  EI+R+VQI+CRRTKNNPILLG+AGVGK
Sbjct: 251  NKKKEKSALALFCLDLTMRASGGLIDPVIGRKDEIERVVQIICRRTKNNPILLGEAGVGK 310

Query: 3951 TAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQKSGDV 3772
            TAIAEGLA +IA GD+P FL+ KRI+SLDV LL+AGAKERGELE RVT LI EV+K+GDV
Sbjct: 311  TAIAEGLAHKIANGDVPIFLVGKRILSLDVALLMAGAKERGELEARVTSLIREVRKAGDV 370

Query: 3771 ILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHFEKDKA 3592
            ILFIDEVHTLIGSG  GRG+KG+GLDIANLLKP L RGELQCIASTTLDEH+ HF+KDKA
Sbjct: 371  ILFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARGELQCIASTTLDEHRLHFDKDKA 430

Query: 3591 LARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIADRHLPD 3412
            LARRFQPVL+NEPSQEDAVKILLGLREKYE++HKC +TL++INAAVYLSARYIADRHLPD
Sbjct: 431  LARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYTLESINAAVYLSARYIADRHLPD 490

Query: 3411 KAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKLTYSAD 3232
            KAIDLIDEAGSRARM++F                EYWQEIRAVQ MH +   +K+ YS +
Sbjct: 491  KAIDLIDEAGSRARMESFKRKKEEQCSILSKSPDEYWQEIRAVQNMHEVALTNKVKYSLN 550

Query: 3231 KTIKEDQSLDLEI--PMSSSPSSL---NDNEKIFVGTEEIATVASLWSGIPVQQINADER 3067
            +  +ED ++D+E+     +SP+S+   + ++   VG+EEIA V SLWSGIPVQQ+ ADER
Sbjct: 551  QNDQED-AVDIELVGEDKTSPASMLSTSTDKPSLVGSEEIARVTSLWSGIPVQQLTADER 609

Query: 3066 KLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTK 2887
            KLLVGLD+ELRKRVIGQDDAV AIS+AVKRSRVGL DPDRPIA ++FCGPTGVGKTELTK
Sbjct: 610  KLLVGLDDELRKRVIGQDDAVLAISKAVKRSRVGLNDPDRPIATLIFCGPTGVGKTELTK 669

Query: 2886 ALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVILL 2707
            ALAASYFGSE + +RLDMSEYMERH VSKLIGSPPGY+G+GEGGTLTEAVRR+PFTV+LL
Sbjct: 670  ALAASYFGSESATVRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLL 729

Query: 2706 DEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRRSIGFFV 2527
            DEIEKAHPDIFNILLQ+FEDGHLTDSQGRRVSFKNTLIVMTSNVGS +IS G+RSIGF  
Sbjct: 730  DEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISNGKRSIGFQT 789

Query: 2526 AEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQ--------------- 2392
              DTE  SYA+MK++VMEE+KA+FRPELLNRIDEVV+F  LE+TQ               
Sbjct: 790  QTDTEEKSYAAMKSLVMEELKAFFRPELLNRIDEVVVFHPLEKTQACCFYRYCTCILPCT 849

Query: 2391 ----MLEISNIMLEQVRSRLSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIE 2224
                ML I NIML++V+ R+ +LGIGL+VSD++ +L+ + G+D+SYGARPLRRA+  L+E
Sbjct: 850  FVNTMLAILNIMLQEVKGRILALGIGLEVSDSMKDLISQHGYDKSYGARPLRRAVTQLVE 909

Query: 2223 DVISEAILAGNYKPGDTITLDIDATGNPTVSQLTSDHIIQLSD 2095
            DVISEAIL+G +KPGDTI +D DATG P +S+L +D  +QLSD
Sbjct: 910  DVISEAILSGQFKPGDTIMMDTDATGKPCLSRL-NDQTVQLSD 951


>ref|XP_006341443.1| PREDICTED: chaperone protein ClpD, chloroplastic-like isoform X1
            [Solanum tuberosum]
          Length = 965

 Score = 1148 bits (2970), Expect = 0.0
 Identities = 607/932 (65%), Positives = 734/932 (78%), Gaps = 16/932 (1%)
 Frame = -3

Query: 4827 PSYHRLTVTSASRFIAASSALPSSRRVDLRRRSYTFLPLPSTXXXXXXXXXXXXXXXXIF 4648
            PS H  T  +AS   + SS+  +   + L  R       PS+                 F
Sbjct: 42   PSSHVATTATASAACSTSSSTSTLFGISLSHR-------PSSSVSRKIKRSLYIVSGV-F 93

Query: 4647 ERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAVR 4468
            ERFTER+IKAV+FSQ+EA+A+GK+MV  QHLLLGL+AE+RS  GFLGS +TID+AREAVR
Sbjct: 94   ERFTERSIKAVMFSQKEAKALGKDMVNTQHLLLGLIAEDRSPGGFLGSRITIDKAREAVR 153

Query: 4467 EIW---------NXXXXXXXXXXXATDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAI 4315
             IW                     ATDV FS+S+KRVFEAAV++SR+MG N++ PEHIAI
Sbjct: 154  SIWLGDSEDDTAKLGSQDSASATSATDVAFSSSTKRVFEAAVEYSRTMGYNYIAPEHIAI 213

Query: 4314 GLFNADDGSAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLASSQKIKEKPSATKST 4135
            GLF  DDGSA +VLKRLGA+++RLA+ A+S+LQ ELAKDGR+P+ S ++ +EK    K T
Sbjct: 214  GLFTVDDGSAGRVLKRLGANVNRLAAEAVSRLQGELAKDGRDPI-SFKRSREKSFPGKIT 272

Query: 4134 SLRSQE-----KGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLG 3970
              RS E     K  L  FCVDLTA A EGLIDP+IGR+TE+QR+++ILCRRTKNNPILLG
Sbjct: 273  IDRSAEQAKAEKNALEQFCVDLTARASEGLIDPVIGRETEVQRMIEILCRRTKNNPILLG 332

Query: 3969 DAGVGKTAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEV 3790
             AGVGKTAIAEGLA+ IAEG+IP+FLM+KR+MSLD+GLL++GAKERGELE RVT LI +V
Sbjct: 333  QAGVGKTAIAEGLAINIAEGNIPAFLMKKRVMSLDIGLLISGAKERGELEARVTTLIKDV 392

Query: 3789 QKSGDVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTH 3610
            ++SG +ILFIDEVHTL+G+GTVGRGNKGSGLDIANLLKP LGRGELQCIASTT+DE + H
Sbjct: 393  KESGHIILFIDEVHTLVGAGTVGRGNKGSGLDIANLLKPTLGRGELQCIASTTMDEFRLH 452

Query: 3609 FEKDKALARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIA 3430
             EKDKA ARRFQP+LINEPSQ DAV+ILLGLREKYESHHKC ++L+AINAAV LS+RYI 
Sbjct: 453  IEKDKAFARRFQPILINEPSQADAVQILLGLREKYESHHKCRYSLEAINAAVELSSRYIP 512

Query: 3429 DRHLPDKAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESK 3250
            DR+LPDKAIDLIDEAGS++RM A                 +YWQEIRAVQ MH ++  SK
Sbjct: 513  DRYLPDKAIDLIDEAGSKSRMQAHKRRKEQQISVLSQSPSDYWQEIRAVQTMHEVILASK 572

Query: 3249 LTYSAD-KTIKEDQSLDLEIPMSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINAD 3073
            LT + D   + +D  L L+ P SSS S  +++E   VG EEIA VASLW+GIP++Q+  D
Sbjct: 573  LTGNDDVSRLDDDSELHLQ-PASSSTS--DEHEPPLVGPEEIAAVASLWTGIPLKQLTVD 629

Query: 3072 ERKLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTEL 2893
            ER LLVGLDE+L+KRV+GQD+AV++I RAVKRSR GLK P+RPI+AMLFCGPTGVGK+EL
Sbjct: 630  ERMLLVGLDEQLKKRVVGQDEAVTSICRAVKRSRTGLKHPNRPISAMLFCGPTGVGKSEL 689

Query: 2892 TKALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVI 2713
             KALAASYFGSE +MLRLDMSEYMERHTVSKLIGSPPGY+GYGEGGTLTEA+RR+PFTV+
Sbjct: 690  AKALAASYFGSESAMLRLDMSEYMERHTVSKLIGSPPGYVGYGEGGTLTEAIRRKPFTVV 749

Query: 2712 LLDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRR-SIG 2536
            LLDEIEKAHPDIFNILLQ+FEDGHLTDSQGRRVSFKN LIVMTSNVGS AI KGR+ +IG
Sbjct: 750  LLDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALIVMTSNVGSTAIVKGRQNTIG 809

Query: 2535 FFVAEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQV 2356
            F +A+D    SYA MK IVMEE+K YFRPELLNRIDEVV+FR LE+ QMLEI N+ML++V
Sbjct: 810  FLLADDESAASYAGMKAIVMEELKTYFRPELLNRIDEVVVFRPLEKPQMLEILNLMLQEV 869

Query: 2355 RSRLSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGD 2176
            R+RL SLGI L+VS+A+M+L+C+QGFDR+YGARPLRRA+  ++ED++ E++L+G++KPGD
Sbjct: 870  RARLVSLGISLEVSEAVMDLICQQGFDRNYGARPLRRAVTQMVEDLLCESVLSGDFKPGD 929

Query: 2175 TITLDIDATGNPTVSQLTSDHIIQLSDAA*TP 2080
               + +D +GNP V   +S   IQLSD    P
Sbjct: 930  VAMIHLDESGNPVVINQSSQS-IQLSDTNGNP 960


>ref|XP_002864094.1| hypothetical protein ARALYDRAFT_495173 [Arabidopsis lyrata subsp.
            lyrata] gi|297309929|gb|EFH40353.1| hypothetical protein
            ARALYDRAFT_495173 [Arabidopsis lyrata subsp. lyrata]
          Length = 946

 Score = 1148 bits (2970), Expect = 0.0
 Identities = 594/918 (64%), Positives = 723/918 (78%), Gaps = 12/918 (1%)
 Frame = -3

Query: 4812 LTVTSASRFIAASSALPSSRRVDLRRRSYTFLPLPSTXXXXXXXXXXXXXXXXIFERFTE 4633
            L ++ ++R I   S  P+  R   +R+   F P+ +                  FERFTE
Sbjct: 43   LGISLSNRTIHRFSTTPTKFRRFPQRKRKKFTPISAV-----------------FERFTE 85

Query: 4632 RAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAVREIWNX 4453
            RAI+A+IFSQ+EA+++GK+MV+ QHLLLGL+AE+R   GFLGSG+TID+AREAV  IW+ 
Sbjct: 86   RAIRAIIFSQKEAKSLGKDMVYTQHLLLGLIAEDRDPQGFLGSGITIDKAREAVWSIWDE 145

Query: 4452 XXXXXXXXXXA-------TDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAIGLFNADD 4294
                      +       TD+PFS S+KRVFEAAV++SR+M C ++ PEHIA+GLF  DD
Sbjct: 146  ANSDSKQEEVSSTSYSKSTDMPFSISTKRVFEAAVEYSRTMDCQYIAPEHIAVGLFTVDD 205

Query: 4293 GSAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLASSQKIKEKPSATK----STSLR 4126
            GSA +VLKRLGA+M+ L + AL++L+ E+AKDGREP +SS+   + P A +     T  +
Sbjct: 206  GSAGRVLKRLGANMNLLTAAALTRLKGEIAKDGREPSSSSKGSFQAPPAGRIAGSGTGGK 265

Query: 4125 SQEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGDAGVGKTA 3946
            ++ K  L  FCVDLTA A EGLIDP+IGR+ E+QR++QILCRRTKNNPILLG+AGVGKTA
Sbjct: 266  AKAKNVLEQFCVDLTARASEGLIDPVIGREKEVQRVIQILCRRTKNNPILLGEAGVGKTA 325

Query: 3945 IAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQKSGDVIL 3766
            IAEGLA+ IAE + P FL+ KRIMSLD+GLL+AGAKERGELE RVT LISEV+KSG VIL
Sbjct: 326  IAEGLAISIAEANAPGFLLTKRIMSLDIGLLMAGAKERGELEARVTALISEVKKSGKVIL 385

Query: 3765 FIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHFEKDKALA 3586
            FIDEVHTLIGSGTVGRGNKGSGLDIANLLKP LGRGELQCIASTTLDE ++ FEKDKALA
Sbjct: 386  FIDEVHTLIGSGTVGRGNKGSGLDIANLLKPSLGRGELQCIASTTLDEFRSQFEKDKALA 445

Query: 3585 RRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIADRHLPDKA 3406
            RRFQPVLINEPS+EDAVKILLGLREKYE+HH C +T++AI+AAVYLS+RYIADR LPDKA
Sbjct: 446  RRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYIADRFLPDKA 505

Query: 3405 IDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKLTYSADKT 3226
            IDLIDEAGSRAR++AF                +YWQEI+ VQAMH +V  S+        
Sbjct: 506  IDLIDEAGSRARIEAFRKKKEDAICILSKPPNDYWQEIKTVQAMHEVVLSSRQKQDDGDA 565

Query: 3225 IKEDQSLDLEIPMSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINADERKLLVGLD 3046
            I  D+S +L +  SS P +  D+E I VG ++IA VAS WSGIPVQQI ADER LL+GL+
Sbjct: 566  I-ADESGEL-VEESSLPPAAGDDEPILVGPDDIAAVASAWSGIPVQQITADERMLLMGLE 623

Query: 3045 EELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAASYF 2866
            ++LR RV+GQD+AV+AISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAA+YF
Sbjct: 624  DQLRSRVVGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYF 683

Query: 2865 GSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVILLDEIEKAH 2686
            GSEESMLRLDMSEYMERHTVSKLIGSPPGY+G+ EGG LTEA+RRRPFTV+L DEIEKAH
Sbjct: 684  GSEESMLRLDMSEYMERHTVSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKAH 743

Query: 2685 PDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRR-SIGFFVAEDTEC 2509
            PDIFNILLQ+FEDGHLTDSQGRRVSFKN LI+MTSNVGS AI+KGR  SIGF + +D E 
Sbjct: 744  PDIFNILLQLFEDGHLTDSQGRRVSFKNALIIMTSNVGSSAIAKGRHGSIGFILDDDEEA 803

Query: 2508 NSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQVRSRLSSLGI 2329
             SY  MK +V+EE+K YFRPELLNRIDE+VIFR LE+ QM+EI N+ML+ ++SRL +LG+
Sbjct: 804  ASYTGMKALVVEELKNYFRPELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGV 863

Query: 2328 GLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGDTITLDIDAT 2149
            GL+VS+ +  L+C+QG+D +YGARPLRR +  ++ED +SEA LAG++KPGDT  + +D T
Sbjct: 864  GLEVSEPVKELICKQGYDPAYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTAFVVLDDT 923

Query: 2148 GNPTVSQLTSDHIIQLSD 2095
            GNP+V        ++++D
Sbjct: 924  GNPSVRTKPDSSTVRVTD 941


>gb|AFJ66170.1| hypothetical protein 11M19.14 [Arabidopsis halleri]
          Length = 946

 Score = 1147 bits (2968), Expect = 0.0
 Identities = 594/918 (64%), Positives = 724/918 (78%), Gaps = 12/918 (1%)
 Frame = -3

Query: 4812 LTVTSASRFIAASSALPSSRRVDLRRRSYTFLPLPSTXXXXXXXXXXXXXXXXIFERFTE 4633
            L ++ ++R I   S+ P++ R   +R+   F P+ +                  FERFTE
Sbjct: 43   LGISLSNRTIHRFSSTPTNFRRFPQRKRKKFTPISAV-----------------FERFTE 85

Query: 4632 RAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAVREIWNX 4453
            RAI+A+IFSQ+EA+++GK+MV+ QHLLLGL+AE+R   GFLGSG+TID+AREAV  IW+ 
Sbjct: 86   RAIRAIIFSQKEAKSLGKDMVYTQHLLLGLIAEDRDPQGFLGSGITIDKAREAVWSIWDE 145

Query: 4452 XXXXXXXXXXA-------TDVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAIGLFNADD 4294
                      +       TD+PFS S+KRVFEAAV++SR+M C ++ PEHIA+GLF  DD
Sbjct: 146  ANSDSKQEEVSSTSYSKSTDMPFSISTKRVFEAAVEYSRTMDCQYIAPEHIAVGLFTVDD 205

Query: 4293 GSAAQVLKRLGADMSRLASVALSKLQVELAKDGREPLASSQKIKEKPSATK----STSLR 4126
            GSA +VLKRLGA+M+ L + AL++L+ E+AKDGREP +SS+   E P + +     T  +
Sbjct: 206  GSAGRVLKRLGANMNLLTAAALTRLKGEIAKDGREPSSSSKGSYEAPPSGRIVGSGTGGK 265

Query: 4125 SQEKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGDAGVGKTA 3946
            ++ K  L  FCVDLTA A EGLIDP+IGR+ E+QR++QILCRRTKNNPILLG+AGVGKTA
Sbjct: 266  AKAKTVLEQFCVDLTARASEGLIDPVIGREKEVQRVIQILCRRTKNNPILLGEAGVGKTA 325

Query: 3945 IAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQKSGDVIL 3766
            IAEGLA+ IAE   P FL+ KRIMSLD+GLL+AGAKERGELE RVT LISEV+KSG VIL
Sbjct: 326  IAEGLAISIAEAKAPGFLLTKRIMSLDIGLLMAGAKERGELEARVTALISEVKKSGKVIL 385

Query: 3765 FIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHFEKDKALA 3586
            FIDEVHTLIGSGTVGRGNKGSGLDIANLLKP LGRGELQCIASTTLDE ++ FEKDKALA
Sbjct: 386  FIDEVHTLIGSGTVGRGNKGSGLDIANLLKPSLGRGELQCIASTTLDEFRSQFEKDKALA 445

Query: 3585 RRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIADRHLPDKA 3406
            RRFQPVLINEPS+EDAVKILLGLREKYE+HH C +T++AI+AAVYLS+RYIADR LPDKA
Sbjct: 446  RRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYIADRFLPDKA 505

Query: 3405 IDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKLTYSADKT 3226
            IDLIDEAGSRAR++AF                +YWQEI+ VQAMH +V  S+        
Sbjct: 506  IDLIDEAGSRARIEAFRKKKEDAICILSKPPNDYWQEIKTVQAMHEVVLSSRQKQDDGDA 565

Query: 3225 IKEDQSLDLEIPMSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINADERKLLVGLD 3046
            I  D+S +L +  SS P +  D+E I VG ++IA VAS WSGIPVQQI ADER LL+GL+
Sbjct: 566  I-ADESGEL-VEESSLPPASGDDEPILVGPDDIAAVASAWSGIPVQQITADERMLLMGLE 623

Query: 3045 EELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAASYF 2866
            ++LR RV+GQD+AV+AISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAA+YF
Sbjct: 624  DQLRSRVVGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYF 683

Query: 2865 GSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVILLDEIEKAH 2686
            GSEESMLRLDMSEYMERHTVSKLIGSPPGY+G+ EGG LTEA+RRRPFTV+L DEIEKAH
Sbjct: 684  GSEESMLRLDMSEYMERHTVSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKAH 743

Query: 2685 PDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRR-SIGFFVAEDTEC 2509
            PDIFNILLQ+FEDGHLTDSQGRRVSFKN LI+MTSNVGS AI+KGR  SIGF + +D E 
Sbjct: 744  PDIFNILLQLFEDGHLTDSQGRRVSFKNALIIMTSNVGSSAIAKGRHGSIGFILDDDEEA 803

Query: 2508 NSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQVRSRLSSLGI 2329
             SY  MK +V+EE+K YFRPELLNRIDE+VIFR LE+ QM+EI N+ML+ ++SRL +LG+
Sbjct: 804  ASYTGMKALVVEELKNYFRPELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGV 863

Query: 2328 GLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGDTITLDIDAT 2149
            GL+VS+ +  L+C+QG+D +YGARPLRR +  ++ED +SEA LAG++KPGDT  + +D T
Sbjct: 864  GLEVSEPVKELICKQGYDPAYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTAFVVLDDT 923

Query: 2148 GNPTVSQLTSDHIIQLSD 2095
            GNP+V        ++++D
Sbjct: 924  GNPSVRTKPDSSTVRVTD 941


>ref|NP_001046997.1| Os02g0526400 [Oryza sativa Japonica Group]
            gi|75123405|sp|Q6H795.1|CLPD1_ORYSJ RecName:
            Full=Chaperone protein ClpD1, chloroplastic; AltName:
            Full=ATP-dependent Clp protease ATP-binding subunit ClpD
            homolog 1; AltName: Full=Casein lytic proteinase D1;
            Flags: Precursor gi|49388289|dbj|BAD25404.1|
            ATP-dependent Clp protease ATP-binding subunit precursor
            [Oryza sativa Japonica Group]
            gi|113536528|dbj|BAF08911.1| Os02g0526400 [Oryza sativa
            Japonica Group]
          Length = 938

 Score = 1144 bits (2960), Expect = 0.0
 Identities = 605/866 (69%), Positives = 708/866 (81%), Gaps = 14/866 (1%)
 Frame = -3

Query: 4650 FERFTERAIKAVIFSQREARAMGKEMVFNQHLLLGLVAEERSLVGFLGSGVTIDQAREAV 4471
            FERFTERA+KAV+ SQREA+ +G+  V  +HLLLGL+AE+RS  GFL SG+ I++ARE  
Sbjct: 74   FERFTERAVKAVVLSQREAKGLGEGAVAPRHLLLGLIAEDRSAGGFLSSGINIERAREEC 133

Query: 4470 REIWNXXXXXXXXXXXAT----DVPFSTSSKRVFEAAVDFSRSMGCNFVGPEHIAIGLFN 4303
            R I              +    D+PFS S KRVFE AV+FSR+MGC+F+ PEH+A+ LF 
Sbjct: 134  RGIGARDLTPGAPSPSGSGLEMDIPFSGSCKRVFEVAVEFSRNMGCSFISPEHLALALFT 193

Query: 4302 ADDGSAAQVLKRLGADMSRLASVALSKLQVELAKDGREPL-ASSQKIKEKPSATK----- 4141
             DD +   +L+ LGAD S+LASVAL++LQ ELAKD REP  ASS K+ +K  A       
Sbjct: 194  LDDPTTNSLLRSLGADPSQLASVALTRLQAELAKDCREPAGASSFKVPKKSPAGAGRSAF 253

Query: 4140 STSLRSQ-EKGPLTDFCVDLTAHAREGLIDPIIGRDTEIQRIVQILCRRTKNNPILLGDA 3964
            S SL S+ EKG L  FC+DLT  A  G IDPIIGR+ EI+R+VQI+CRRTKNNPILLG+A
Sbjct: 254  SKSLNSKKEKGALDQFCLDLTTQASGGFIDPIIGREEEIERVVQIICRRTKNNPILLGEA 313

Query: 3963 GVGKTAIAEGLALRIAEGDIPSFLMEKRIMSLDVGLLLAGAKERGELETRVTGLISEVQK 3784
            GVGKTAIAEGLALRIA GD+P +L+ KRIMSLDVGLL+AGAKERGELE+RVT LI EV++
Sbjct: 314  GVGKTAIAEGLALRIANGDVPIYLVAKRIMSLDVGLLIAGAKERGELESRVTSLIREVRE 373

Query: 3783 SGDVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEHKTHFE 3604
            +GDVILFIDEVH LIGSGTVG+G KG+GLDI NLLKPPL RGELQCIA+TTLDEH+ HFE
Sbjct: 374  AGDVILFIDEVHNLIGSGTVGKG-KGAGLDIGNLLKPPLARGELQCIAATTLDEHRMHFE 432

Query: 3603 KDKALARRFQPVLINEPSQEDAVKILLGLREKYESHHKCTFTLDAINAAVYLSARYIADR 3424
            KDKALARRFQPVL+ EPSQ+DAVKILLGLREKYE++HKC FTL+AINAAVYLSARYI DR
Sbjct: 433  KDKALARRFQPVLVEEPSQDDAVKILLGLREKYETYHKCKFTLEAINAAVYLSARYIPDR 492

Query: 3423 HLPDKAIDLIDEAGSRARMDAFXXXXXXXXXXXXXXXXEYWQEIRAVQAMHALVSESKLT 3244
             LPDKAIDLIDEAGSRARM++F                EYWQEIRA Q MH +VS +++ 
Sbjct: 493  QLPDKAIDLIDEAGSRARMESFNRKKEGQSSILLKSPDEYWQEIRAAQNMHEVVSSNQMK 552

Query: 3243 YSADKTIKEDQSLDLEIP---MSSSPSSLNDNEKIFVGTEEIATVASLWSGIPVQQINAD 3073
            YS  +   E+ S  ++ P   M+   S L   E I VGTEEIA VASLWSGIPVQQ+ AD
Sbjct: 553  YSPRQ---ENGSAAIKAPSEDMNELTSELQVEEPIVVGTEEIARVASLWSGIPVQQLTAD 609

Query: 3072 ERKLLVGLDEELRKRVIGQDDAVSAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTEL 2893
            +RKLLVGLD ELRKRVIGQDDAV AISRAVKRSRVGL DPDRPIA +LFCGPTGVGKTEL
Sbjct: 610  DRKLLVGLDGELRKRVIGQDDAVMAISRAVKRSRVGLNDPDRPIATLLFCGPTGVGKTEL 669

Query: 2892 TKALAASYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYIGYGEGGTLTEAVRRRPFTVI 2713
            TKALAASYFGSE +MLRLDMSEYMERHTVSKLIGSPPGYIGYGE GTLTEAVRR+PFTV+
Sbjct: 670  TKALAASYFGSESAMLRLDMSEYMERHTVSKLIGSPPGYIGYGETGTLTEAVRRKPFTVV 729

Query: 2712 LLDEIEKAHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSEAISKGRRSIGF 2533
            LLDEIEKAHPDIFNILLQ+FEDGHL+DSQGRRVSFKNTLIVMTSN+GS +ISKGRRS+G 
Sbjct: 730  LLDEIEKAHPDIFNILLQIFEDGHLSDSQGRRVSFKNTLIVMTSNIGSTSISKGRRSMG- 788

Query: 2532 FVAEDTECNSYASMKTIVMEEIKAYFRPELLNRIDEVVIFRSLEQTQMLEISNIMLEQVR 2353
            F+ EDTE +SY +MK++VMEE+KA+FRPELLNRIDE+V+FR LE+TQML I +I+L++V+
Sbjct: 789  FMTEDTESSSYVAMKSLVMEELKAFFRPELLNRIDEMVVFRPLEKTQMLAILDIILQEVK 848

Query: 2352 SRLSSLGIGLKVSDAIMNLVCEQGFDRSYGARPLRRAIASLIEDVISEAILAGNYKPGDT 2173
             RL +LGIGL+VSDA+ +L+CE+G+D+SYGARPLRRA+  LIEDVISEAIL G YKPGDT
Sbjct: 849  GRLLALGIGLEVSDAMKDLICEEGYDKSYGARPLRRAVTHLIEDVISEAILFGEYKPGDT 908

Query: 2172 ITLDIDATGNPTVSQLTSDHIIQLSD 2095
            I +DIDA G   +S L ++ ++QLSD
Sbjct: 909  ILMDIDAGGKLCMSHL-NEKVVQLSD 933