BLASTX nr result
ID: Zingiber23_contig00007330
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00007330
(291 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT16092.1| Putative DNA repair protein RAD23-1 [Aegilops tau... 96 7e-18
gb|EMS58233.1| Putative DNA repair protein RAD23-1 [Triticum ura... 96 7e-18
ref|XP_002451657.1| hypothetical protein SORBIDRAFT_04g005370 [S... 95 1e-17
ref|XP_006646967.1| PREDICTED: ubiquitin receptor RAD23b-like is... 93 3e-17
ref|XP_006646966.1| PREDICTED: ubiquitin receptor RAD23b-like is... 93 3e-17
dbj|BAK04690.1| predicted protein [Hordeum vulgare subsp. vulgare] 92 7e-17
ref|XP_006845449.1| hypothetical protein AMTR_s00019p00116110 [A... 91 1e-16
gb|AFW66284.1| hypothetical protein ZEAMMB73_839350 [Zea mays] 91 1e-16
gb|AFW66280.1| hypothetical protein ZEAMMB73_839350 [Zea mays] 91 1e-16
ref|NP_001148810.1| LOC100282427 [Zea mays] gi|195622286|gb|ACG3... 91 1e-16
gb|ACF83232.1| unknown [Zea mays] gi|413926353|gb|AFW66285.1| hy... 91 1e-16
ref|XP_006646969.1| PREDICTED: ubiquitin receptor RAD23b-like is... 91 2e-16
ref|XP_006646968.1| PREDICTED: ubiquitin receptor RAD23b-like is... 91 2e-16
ref|XP_002270323.2| PREDICTED: putative DNA repair protein RAD23... 89 5e-16
emb|CBI25247.3| unnamed protein product [Vitis vinifera] 89 5e-16
gb|EOY27441.1| Rad23 UV excision repair protein family isoform 2... 89 6e-16
gb|EOY27440.1| Rad23 UV excision repair protein family isoform 1... 89 6e-16
gb|EXC14085.1| Putative DNA repair protein RAD23-1 [Morus notabi... 88 1e-15
ref|XP_003570619.1| PREDICTED: putative DNA repair protein RAD23... 88 1e-15
ref|XP_003529480.1| PREDICTED: ubiquitin receptor RAD23b-like is... 88 1e-15
>gb|EMT16092.1| Putative DNA repair protein RAD23-1 [Aegilops tauschii]
Length = 466
Score = 95.5 bits (236), Expect = 7e-18
Identities = 49/89 (55%), Positives = 57/89 (64%)
Frame = -1
Query: 291 QVQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPS 112
++QGKD+YPWGQQLLIHNGKVLKDE+TL+EN+V EDGFLVVML AQPS
Sbjct: 99 EIQGKDSYPWGQQLLIHNGKVLKDESTLDENQVSEDGFLVVMLSKSKASASSGASSAQPS 158
Query: 111 ATSVVQHPALKDAPSQAPSQVPSEVPAQP 25
+T V P QVPS +QP
Sbjct: 159 STPVTSQAPPVAQPQAPQPQVPSTTTSQP 187
>gb|EMS58233.1| Putative DNA repair protein RAD23-1 [Triticum urartu]
Length = 434
Score = 95.5 bits (236), Expect = 7e-18
Identities = 49/89 (55%), Positives = 57/89 (64%)
Frame = -1
Query: 291 QVQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPS 112
++QGKD+YPWGQQLLIHNGKVLKDE+TL+EN+V EDGFLVVML AQPS
Sbjct: 32 EIQGKDSYPWGQQLLIHNGKVLKDESTLDENQVSEDGFLVVMLSKSKASASSGASSAQPS 91
Query: 111 ATSVVQHPALKDAPSQAPSQVPSEVPAQP 25
+T V P QVPS +QP
Sbjct: 92 STPVTSQAPPVAQPQAPQPQVPSTTTSQP 120
>ref|XP_002451657.1| hypothetical protein SORBIDRAFT_04g005370 [Sorghum bicolor]
gi|241931488|gb|EES04633.1| hypothetical protein
SORBIDRAFT_04g005370 [Sorghum bicolor]
Length = 369
Score = 94.7 bits (234), Expect = 1e-17
Identities = 53/107 (49%), Positives = 65/107 (60%), Gaps = 10/107 (9%)
Frame = -1
Query: 291 QVQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPS 112
++QGKD+YPWGQQLLI NGKVLKDE+TL+ENKV EDGFLVVML +QPS
Sbjct: 32 EIQGKDSYPWGQQLLIFNGKVLKDESTLDENKVNEDGFLVVMLSKGKTSGSSGTSSSQPS 91
Query: 111 ATSVVQHPALKDAPSQAP--------SQVPSEVPAQ--PIVADNSSN 1
T + DAP QAP + P +PAQ P DN+++
Sbjct: 92 NTPAARQAPPLDAPQQAPQPPVAPTTTSQPEGLPAQAPPNTYDNAAS 138
>ref|XP_006646967.1| PREDICTED: ubiquitin receptor RAD23b-like isoform X2 [Oryza
brachyantha]
Length = 370
Score = 93.2 bits (230), Expect = 3e-17
Identities = 54/100 (54%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Frame = -1
Query: 291 QVQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPS 112
++QGKD+YPWGQQLLIHNGKVLKDE+TLEENKV EDGFLVVML A S
Sbjct: 32 EIQGKDSYPWGQQLLIHNGKVLKDESTLEENKVSEDGFLVVMLSKSKASGSSGALTALAS 91
Query: 111 ATSVVQHPALKDAPSQA--PSQVPSEVP-AQPIVADNSSN 1
+T + DAP QA P PS P + AD+ SN
Sbjct: 92 STPSTRQAPPPDAPQQATQPPAAPSTTPQLERPPADDPSN 131
>ref|XP_006646966.1| PREDICTED: ubiquitin receptor RAD23b-like isoform X1 [Oryza
brachyantha]
Length = 371
Score = 93.2 bits (230), Expect = 3e-17
Identities = 54/100 (54%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Frame = -1
Query: 291 QVQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPS 112
++QGKD+YPWGQQLLIHNGKVLKDE+TLEENKV EDGFLVVML A S
Sbjct: 32 EIQGKDSYPWGQQLLIHNGKVLKDESTLEENKVSEDGFLVVMLSKSKASGSSGALTALAS 91
Query: 111 ATSVVQHPALKDAPSQA--PSQVPSEVP-AQPIVADNSSN 1
+T + DAP QA P PS P + AD+ SN
Sbjct: 92 STPSTRQAPPPDAPQQATQPPAAPSTTPQLERPPADDPSN 131
>dbj|BAK04690.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 92.0 bits (227), Expect = 7e-17
Identities = 48/89 (53%), Positives = 56/89 (62%)
Frame = -1
Query: 291 QVQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPS 112
++QGKD+YPWGQQLLIHNGKVLKDE+TL+EN+V E GFLVVML AQPS
Sbjct: 32 EIQGKDSYPWGQQLLIHNGKVLKDESTLDENQVGEAGFLVVMLSKSKASASSGGSSAQPS 91
Query: 111 ATSVVQHPALKDAPSQAPSQVPSEVPAQP 25
+T V P QVPS +QP
Sbjct: 92 STPVTSQAPPVAQPQAPQPQVPSTTTSQP 120
>ref|XP_006845449.1| hypothetical protein AMTR_s00019p00116110 [Amborella trichopoda]
gi|548848021|gb|ERN07124.1| hypothetical protein
AMTR_s00019p00116110 [Amborella trichopoda]
Length = 370
Score = 91.3 bits (225), Expect = 1e-16
Identities = 52/89 (58%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = -1
Query: 291 QVQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPS 112
++QGKDNYP GQQLLIHNGKVLKDETTLEENKV EDGFLVVML AQPS
Sbjct: 32 ELQGKDNYPCGQQLLIHNGKVLKDETTLEENKVSEDGFLVVMLSKSKTSGSGGATSAQPS 91
Query: 111 ATSV-VQHPALKDAPSQAPSQVPSEVPAQ 28
A + Q+P AP P + S+ PA+
Sbjct: 92 AAATNPQNPT--PAPESRPQPMASQNPAR 118
>gb|AFW66284.1| hypothetical protein ZEAMMB73_839350 [Zea mays]
Length = 296
Score = 91.3 bits (225), Expect = 1e-16
Identities = 52/106 (49%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
Frame = -1
Query: 291 QVQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPS 112
++QGKD+YPWGQQLLI NGKVLKDE+TLEENKV EDGFLVVML +Q S
Sbjct: 32 EIQGKDSYPWGQQLLIFNGKVLKDESTLEENKVNEDGFLVVMLSKGKTSGSTGTSSSQHS 91
Query: 111 ATSVVQHPALKDAPSQAP--------SQVPSEVPAQ-PIVADNSSN 1
T + +AP QAP + P +PAQ P DN+++
Sbjct: 92 NTPATRQAPPLEAPQQAPQPPVAPITTSQPEGLPAQAPNTHDNAAS 137
>gb|AFW66280.1| hypothetical protein ZEAMMB73_839350 [Zea mays]
Length = 369
Score = 91.3 bits (225), Expect = 1e-16
Identities = 52/106 (49%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
Frame = -1
Query: 291 QVQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPS 112
++QGKD+YPWGQQLLI NGKVLKDE+TLEENKV EDGFLVVML +Q S
Sbjct: 32 EIQGKDSYPWGQQLLIFNGKVLKDESTLEENKVNEDGFLVVMLSKGKTSGSTGTSSSQHS 91
Query: 111 ATSVVQHPALKDAPSQAP--------SQVPSEVPAQ-PIVADNSSN 1
T + +AP QAP + P +PAQ P DN+++
Sbjct: 92 NTPATRQAPPLEAPQQAPQPPVAPITTSQPEGLPAQAPNTHDNAAS 137
>ref|NP_001148810.1| LOC100282427 [Zea mays] gi|195622286|gb|ACG32973.1| DNA repair
protein RAD23-1 [Zea mays] gi|238014028|gb|ACR38049.1|
unknown [Zea mays] gi|413926349|gb|AFW66281.1| DNA
repair protein RAD23-1 isoform 1 [Zea mays]
gi|413926350|gb|AFW66282.1| DNA repair protein RAD23-1
isoform 2 [Zea mays] gi|413926351|gb|AFW66283.1| DNA
repair protein RAD23-1 isoform 3 [Zea mays]
Length = 368
Score = 91.3 bits (225), Expect = 1e-16
Identities = 52/106 (49%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
Frame = -1
Query: 291 QVQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPS 112
++QGKD+YPWGQQLLI NGKVLKDE+TLEENKV EDGFLVVML +Q S
Sbjct: 32 EIQGKDSYPWGQQLLIFNGKVLKDESTLEENKVNEDGFLVVMLSKGKTSGSTGTSSSQHS 91
Query: 111 ATSVVQHPALKDAPSQAP--------SQVPSEVPAQ-PIVADNSSN 1
T + +AP QAP + P +PAQ P DN+++
Sbjct: 92 NTPATRQAPPLEAPQQAPQPPVAPITTSQPEGLPAQAPNTHDNAAS 137
>gb|ACF83232.1| unknown [Zea mays] gi|413926353|gb|AFW66285.1| hypothetical protein
ZEAMMB73_839350 [Zea mays]
Length = 185
Score = 91.3 bits (225), Expect = 1e-16
Identities = 52/106 (49%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
Frame = -1
Query: 291 QVQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPS 112
++QGKD+YPWGQQLLI NGKVLKDE+TLEENKV EDGFLVVML +Q S
Sbjct: 32 EIQGKDSYPWGQQLLIFNGKVLKDESTLEENKVNEDGFLVVMLSKGKTSGSTGTSSSQHS 91
Query: 111 ATSVVQHPALKDAPSQAP--------SQVPSEVPAQ-PIVADNSSN 1
T + +AP QAP + P +PAQ P DN+++
Sbjct: 92 NTPATRQAPPLEAPQQAPQPPVAPITTSQPEGLPAQAPNTHDNAAS 137
>ref|XP_006646969.1| PREDICTED: ubiquitin receptor RAD23b-like isoform X2 [Oryza
brachyantha]
Length = 369
Score = 90.9 bits (224), Expect = 2e-16
Identities = 53/99 (53%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Frame = -1
Query: 288 VQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPSA 109
+QGKD+YPWGQQLLIHNGKVLKDE+TLEENKV ED FLVVML A S+
Sbjct: 33 IQGKDSYPWGQQLLIHNGKVLKDESTLEENKVSEDNFLVVMLSKSKASGSSGALTALASS 92
Query: 108 TSVVQHPALKDAPSQAPSQV--PSEVP-AQPIVADNSSN 1
T + DAP QAP + PS P + AD+ SN
Sbjct: 93 TPSTRQAPPPDAPQQAPQPLAAPSTTPQLERPPADDPSN 131
>ref|XP_006646968.1| PREDICTED: ubiquitin receptor RAD23b-like isoform X1 [Oryza
brachyantha]
Length = 370
Score = 90.9 bits (224), Expect = 2e-16
Identities = 53/99 (53%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Frame = -1
Query: 288 VQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPSA 109
+QGKD+YPWGQQLLIHNGKVLKDE+TLEENKV ED FLVVML A S+
Sbjct: 33 IQGKDSYPWGQQLLIHNGKVLKDESTLEENKVSEDNFLVVMLSKSKASGSSGALTALASS 92
Query: 108 TSVVQHPALKDAPSQAPSQV--PSEVP-AQPIVADNSSN 1
T + DAP QAP + PS P + AD+ SN
Sbjct: 93 TPSTRQAPPPDAPQQAPQPLAAPSTTPQLERPPADDPSN 131
>ref|XP_002270323.2| PREDICTED: putative DNA repair protein RAD23-1-like [Vitis
vinifera]
Length = 400
Score = 89.4 bits (220), Expect = 5e-16
Identities = 50/86 (58%), Positives = 56/86 (65%)
Frame = -1
Query: 288 VQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPSA 109
VQGKDNYP GQQLLIHNGKVLKDETTL ENKV EDGFLVVML AQ ++
Sbjct: 33 VQGKDNYPCGQQLLIHNGKVLKDETTLVENKVTEDGFLVVMLSKSKSIGATGTSSAQSAS 92
Query: 108 TSVVQHPALKDAPSQAPSQVPSEVPA 31
T PA P+ AP+ +P+ PA
Sbjct: 93 T-----PAPAAIPTPAPAPIPTPAPA 113
>emb|CBI25247.3| unnamed protein product [Vitis vinifera]
Length = 399
Score = 89.4 bits (220), Expect = 5e-16
Identities = 50/86 (58%), Positives = 56/86 (65%)
Frame = -1
Query: 288 VQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPSA 109
VQGKDNYP GQQLLIHNGKVLKDETTL ENKV EDGFLVVML AQ ++
Sbjct: 33 VQGKDNYPCGQQLLIHNGKVLKDETTLVENKVTEDGFLVVMLSKSKSIGATGTSSAQSAS 92
Query: 108 TSVVQHPALKDAPSQAPSQVPSEVPA 31
T PA P+ AP+ +P+ PA
Sbjct: 93 T-----PAPAAIPTPAPAPIPTPAPA 113
>gb|EOY27441.1| Rad23 UV excision repair protein family isoform 2, partial
[Theobroma cacao]
Length = 303
Score = 89.0 bits (219), Expect = 6e-16
Identities = 51/83 (61%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Frame = -1
Query: 285 QGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQP-SA 109
QGKDNYP GQQLLIHNGKVLKDETTL +NKV EDGFLVVML AQP S+
Sbjct: 34 QGKDNYPCGQQLLIHNGKVLKDETTLADNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASS 93
Query: 108 TSVVQHPALKDAPS-QAPSQVPS 43
T V PA AP+ +AP+Q P+
Sbjct: 94 TPSVTPPASNPAPAPEAPAQAPT 116
>gb|EOY27440.1| Rad23 UV excision repair protein family isoform 1 [Theobroma cacao]
Length = 373
Score = 89.0 bits (219), Expect = 6e-16
Identities = 51/83 (61%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Frame = -1
Query: 285 QGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQP-SA 109
QGKDNYP GQQLLIHNGKVLKDETTL +NKV EDGFLVVML AQP S+
Sbjct: 34 QGKDNYPCGQQLLIHNGKVLKDETTLADNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASS 93
Query: 108 TSVVQHPALKDAPS-QAPSQVPS 43
T V PA AP+ +AP+Q P+
Sbjct: 94 TPSVTPPASNPAPAPEAPAQAPT 116
>gb|EXC14085.1| Putative DNA repair protein RAD23-1 [Morus notabilis]
Length = 421
Score = 88.2 bits (217), Expect = 1e-15
Identities = 51/93 (54%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = -1
Query: 288 VQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPSA 109
VQGKDNYP GQQLLIHNGKVLKDETTL ENKV EDGFLVVML QP++
Sbjct: 33 VQGKDNYPCGQQLLIHNGKVLKDETTLAENKVSEDGFLVVMLSKSKTLGSAGASSTQPAS 92
Query: 108 TS-VVQHPALKDAPSQAPSQVPSEVPAQPIVAD 13
T+ P A AP++ +E PA P A+
Sbjct: 93 TNPPATAPTSNAAAPAAPAE--AEAPAAPAEAE 123
>ref|XP_003570619.1| PREDICTED: putative DNA repair protein RAD23-1-like [Brachypodium
distachyon]
Length = 368
Score = 87.8 bits (216), Expect = 1e-15
Identities = 50/90 (55%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Frame = -1
Query: 291 QVQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPS 112
++QGKDNYPWGQQLLIH GK+LKDE+TLEEN+V EDG LVVML AQPS
Sbjct: 32 EIQGKDNYPWGQQLLIHTGKILKDESTLEENQVSEDGSLVVMLSKSKASVSSGASSAQPS 91
Query: 111 ATSVVQHPALKDAPSQ-APSQVPSEVPAQP 25
+ V + A DA Q A S VP +QP
Sbjct: 92 SIPVTRQ-APPDAQIQAAESSVPPTTTSQP 120
>ref|XP_003529480.1| PREDICTED: ubiquitin receptor RAD23b-like isoform 1 [Glycine max]
Length = 363
Score = 87.8 bits (216), Expect = 1e-15
Identities = 52/96 (54%), Positives = 60/96 (62%)
Frame = -1
Query: 288 VQGKDNYPWGQQLLIHNGKVLKDETTLEENKVREDGFLVVMLXXXXXXXXXXXXXAQPSA 109
VQGKDNYP GQQLLIHNGKVLKDETTL ENKV EDGFLVVML QP++
Sbjct: 33 VQGKDNYPCGQQLLIHNGKVLKDETTLVENKVSEDGFLVVMLSKSKTSGSAAASSVQPAS 92
Query: 108 TSVVQHPALKDAPSQAPSQVPSEVPAQPIVADNSSN 1
+PA S + S PS+ P Q A+NS++
Sbjct: 93 -----NPA--TTVSMSNSTPPSDPPVQTQAANNSTS 121