BLASTX nr result
ID: Zingiber23_contig00007187
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00007187
(438 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT16710.1| 50S ribosomal protein L7/L12 [Aegilops tauschii] 97 2e-18
ref|XP_003571363.1| PREDICTED: uncharacterized protein LOC100839... 94 1e-17
ref|XP_004951551.1| PREDICTED: 54S ribosomal protein L12, mitoch... 94 2e-17
ref|NP_001046212.1| Os02g0198900 [Oryza sativa Japonica Group] g... 94 2e-17
ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Rici... 93 3e-17
ref|NP_001131197.1| uncharacterized protein LOC100192505 [Zea ma... 92 7e-17
gb|ACF79505.1| unknown [Zea mays] gi|413926230|gb|AFW66162.1| 60... 92 7e-17
dbj|BAK07612.1| predicted protein [Hordeum vulgare subsp. vulgare] 91 1e-16
ref|XP_006647035.1| PREDICTED: 54S ribosomal protein L12, mitoch... 89 8e-16
ref|NP_001136602.1| hypothetical protein [Zea mays] gi|194696326... 88 1e-15
gb|EMJ10833.1| hypothetical protein PRUPE_ppa011860mg [Prunus pe... 88 1e-15
ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 87 2e-15
ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloro... 87 3e-15
ref|XP_002282612.1| PREDICTED: 50S ribosomal protein L12, chloro... 83 3e-14
ref|XP_006341095.1| PREDICTED: 54S ribosomal protein L12, mitoch... 83 4e-14
gb|ABA40429.1| unknown [Solanum tuberosum] 83 4e-14
ref|XP_004246494.1| PREDICTED: 50S ribosomal protein L12-2, chlo... 82 7e-14
gb|EOY20734.1| Ribosomal protein L12/ ATP-dependent Clp protease... 82 1e-13
ref|XP_002321601.1| ribosomal protein L12 [Populus trichocarpa] ... 82 1e-13
gb|EXB87892.1| 50S ribosomal protein [Morus notabilis] 79 6e-13
>gb|EMT16710.1| 50S ribosomal protein L7/L12 [Aegilops tauschii]
Length = 336
Score = 97.1 bits (240), Expect = 2e-18
Identities = 59/123 (47%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Frame = -3
Query: 415 VGSQHLQSSPAVSLNF-----DTSVTMRLITGVKCLRYSSNLSKRAALSSWDRLFSDVAA 251
+GSQ L SSP+ ++ D +++ I C S+ S+ + + + RL S AA
Sbjct: 72 MGSQSLVSSPSFAIFLCQYLVDGRMSLSSIARRLCCSRQSSTSRLSVVLA--RLHSTEAA 129
Query: 250 GETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLADRIAALPPEELKQIGPTLHLRLNQPAL 71
+T +K RYKYP VY+P+GP P SEKV+ LADRIAALPPEE+KQI P L LRLNQPA
Sbjct: 130 KDTGAK--RYKYPEVYDPYGPMPPASEKVVGLADRIAALPPEEIKQIAPALLLRLNQPAP 187
Query: 70 HSI 62
+I
Sbjct: 188 QAI 190
>ref|XP_003571363.1| PREDICTED: uncharacterized protein LOC100839005 [Brachypodium
distachyon]
Length = 192
Score = 94.4 bits (233), Expect = 1e-17
Identities = 47/71 (66%), Positives = 57/71 (80%)
Frame = -3
Query: 274 RLFSDVAAGETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLADRIAALPPEELKQIGPTLH 95
R++S AA +T++K RYKYP VY+P+GP PPSEKV+ LADRIAALPPEE+KQI P L
Sbjct: 27 RMYSTEAATDTSAK--RYKYPEVYDPYGPMPPPSEKVVGLADRIAALPPEEIKQIAPALL 84
Query: 94 LRLNQPALHSI 62
LRLNQPA +I
Sbjct: 85 LRLNQPAPQAI 95
>ref|XP_004951551.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Setaria
italica]
Length = 192
Score = 94.0 bits (232), Expect = 2e-17
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = -3
Query: 328 CLRYSSNLSKRAALSSWDRLFSDVAAGETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLAD 149
CL S+ S+ +A+ W L+S AA +T +K +YKYP VY+P+GP PPSEKV+ LAD
Sbjct: 11 CLSRPSSSSRLSAV--WAHLYSTEAAKDTGAK--KYKYPDVYDPYGPMPPPSEKVVDLAD 66
Query: 148 RIAALPPEELKQIGPTLHLRLNQ 80
RIAALPPEE+KQI P L LRLNQ
Sbjct: 67 RIAALPPEEIKQIAPALLLRLNQ 89
>ref|NP_001046212.1| Os02g0198900 [Oryza sativa Japonica Group]
gi|49388359|dbj|BAD25469.1| ribosomal protein L12-like
protein [Oryza sativa Japonica Group]
gi|113535743|dbj|BAF08126.1| Os02g0198900 [Oryza sativa
Japonica Group] gi|125538497|gb|EAY84892.1| hypothetical
protein OsI_06257 [Oryza sativa Indica Group]
gi|125581184|gb|EAZ22115.1| hypothetical protein
OsJ_05777 [Oryza sativa Japonica Group]
gi|215687281|dbj|BAG91846.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 193
Score = 93.6 bits (231), Expect = 2e-17
Identities = 45/73 (61%), Positives = 56/73 (76%)
Frame = -3
Query: 280 WDRLFSDVAAGETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLADRIAALPPEELKQIGPT 101
W L+S AA +T +K +YKYP VY+P+GP +PPS+KV+ LADRIAALPPEE+KQI P
Sbjct: 25 WAHLYSTEAAKDTGAK--KYKYPEVYDPYGPMSPPSQKVVDLADRIAALPPEEIKQIAPA 82
Query: 100 LHLRLNQPALHSI 62
L LRLNQP +I
Sbjct: 83 LLLRLNQPPPQAI 95
>ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
gi|223550509|gb|EEF51996.1| 50S ribosomal protein
L7/L12, putative [Ricinus communis]
Length = 193
Score = 93.2 bits (230), Expect = 3e-17
Identities = 46/101 (45%), Positives = 63/101 (62%)
Frame = -3
Query: 364 TSVTMRLITGVKCLRYSSNLSKRAALSSWDRLFSDVAAGETNSKPKRYKYPAVYEPFGPK 185
T T+R ITG +R+ + D + P++YKYPA Y+P+GP+
Sbjct: 12 TRYTLREITGPLQVRFFQH---------------DFVPRDPKINPRKYKYPAFYDPYGPR 56
Query: 184 APPSEKVLQLADRIAALPPEELKQIGPTLHLRLNQPALHSI 62
PPS+K++QLA+RIAALPPEE +QIGPTLH +LN P L +I
Sbjct: 57 PPPSDKIVQLAERIAALPPEERRQIGPTLHYKLNHPKLQTI 97
>ref|NP_001131197.1| uncharacterized protein LOC100192505 [Zea mays]
gi|195635905|gb|ACG37421.1| 60S ribosomal protein L7/L12
precursor [Zea mays]
Length = 191
Score = 92.0 bits (227), Expect = 7e-17
Identities = 48/83 (57%), Positives = 61/83 (73%)
Frame = -3
Query: 328 CLRYSSNLSKRAALSSWDRLFSDVAAGETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLAD 149
CL S+ S+ +A+ W L+S AA + +K +YKYP VY+P+GP PPSEKV++LAD
Sbjct: 11 CLSKPSSGSRLSAI--WAHLYSTEAAKDMGAK--KYKYPDVYDPYGPMPPPSEKVVELAD 66
Query: 148 RIAALPPEELKQIGPTLHLRLNQ 80
RIAALPPEE+KQI P L LRLNQ
Sbjct: 67 RIAALPPEEIKQIAPALLLRLNQ 89
>gb|ACF79505.1| unknown [Zea mays] gi|413926230|gb|AFW66162.1| 60S ribosomal
protein L7/L12 isoform 1 [Zea mays]
gi|413926231|gb|AFW66163.1| 60S ribosomal protein L7/L12
isoform 2 [Zea mays]
Length = 191
Score = 92.0 bits (227), Expect = 7e-17
Identities = 48/83 (57%), Positives = 61/83 (73%)
Frame = -3
Query: 328 CLRYSSNLSKRAALSSWDRLFSDVAAGETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLAD 149
CL S+ S+ +A+ W L+S AA + +K +YKYP VY+P+GP PPSEKV++LAD
Sbjct: 11 CLSKPSSGSRLSAI--WAHLYSTEAAKDMGAK--KYKYPDVYDPYGPMPPPSEKVVELAD 66
Query: 148 RIAALPPEELKQIGPTLHLRLNQ 80
RIAALPPEE+KQI P L LRLNQ
Sbjct: 67 RIAALPPEEIKQIAPALLLRLNQ 89
>dbj|BAK07612.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 192
Score = 91.3 bits (225), Expect = 1e-16
Identities = 51/89 (57%), Positives = 60/89 (67%)
Frame = -3
Query: 328 CLRYSSNLSKRAALSSWDRLFSDVAAGETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLAD 149
C R SS L+ RL+S AA +T +K RYKYP VY+P+GP P SEKV+ LAD
Sbjct: 12 CSRQSSTSRLSMVLA---RLYSTEAAKDTGAK--RYKYPEVYDPYGPMPPASEKVVGLAD 66
Query: 148 RIAALPPEELKQIGPTLHLRLNQPALHSI 62
RIAALPPEE+KQI P L LRLNQP +I
Sbjct: 67 RIAALPPEEIKQIAPALLLRLNQPTPQAI 95
>ref|XP_006647035.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Oryza
brachyantha]
Length = 193
Score = 88.6 bits (218), Expect = 8e-16
Identities = 48/97 (49%), Positives = 61/97 (62%)
Frame = -3
Query: 352 MRLITGVKCLRYSSNLSKRAALSSWDRLFSDVAAGETNSKPKRYKYPAVYEPFGPKAPPS 173
M L T + L YS S W ++S A+ + +K +YKYP VY+P+G PPS
Sbjct: 1 MSLSTIARRLCYSRPTSGARVSVVWAHMYSTEASKDMGAK--KYKYPEVYDPYGAMLPPS 58
Query: 172 EKVLQLADRIAALPPEELKQIGPTLHLRLNQPALHSI 62
+KV+ LADRIAALPPEE+KQI P L LRLNQP +I
Sbjct: 59 QKVVDLADRIAALPPEEIKQIAPALLLRLNQPPPQAI 95
>ref|NP_001136602.1| hypothetical protein [Zea mays] gi|194696326|gb|ACF82247.1| unknown
[Zea mays] gi|219888827|gb|ACL54788.1| unknown [Zea
mays] gi|413936163|gb|AFW70714.1| hypothetical protein
ZEAMMB73_365257 [Zea mays] gi|413936164|gb|AFW70715.1|
hypothetical protein ZEAMMB73_365257 [Zea mays]
Length = 192
Score = 88.2 bits (217), Expect = 1e-15
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = -3
Query: 328 CLRYSSNLSKRAALSSWDRLFSDVAAGETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLAD 149
CL S++++ + + W L+S AA +T +K +YKYP VY+P+GP + PSEKV+ LAD
Sbjct: 11 CLSKPSSVNRLSVI--WAHLYSTEAAKDTGAK--KYKYPDVYDPYGPMSLPSEKVVDLAD 66
Query: 148 RIAALPPEELKQIGPTLHLRLNQ 80
RIAALPPEE+KQI P L RLNQ
Sbjct: 67 RIAALPPEEIKQIAPALLFRLNQ 89
>gb|EMJ10833.1| hypothetical protein PRUPE_ppa011860mg [Prunus persica]
gi|462405370|gb|EMJ10834.1| hypothetical protein
PRUPE_ppa011860mg [Prunus persica]
Length = 193
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/97 (45%), Positives = 60/97 (61%)
Frame = -3
Query: 352 MRLITGVKCLRYSSNLSKRAALSSWDRLFSDVAAGETNSKPKRYKYPAVYEPFGPKAPPS 173
MRL+ + R L + + D A + ++KPK+YKYPA Y+P+GP+ PPS
Sbjct: 1 MRLVALARSFRARPTLPETTGPLQFRCFQPDFAPRDPDAKPKKYKYPAFYDPYGPRPPPS 60
Query: 172 EKVLQLADRIAALPPEELKQIGPTLHLRLNQPALHSI 62
+K++QLA+RIAAL PEE Q+GPTL RL P L I
Sbjct: 61 DKIIQLAERIAALAPEERCQLGPTLGERLRLPKLQPI 97
>ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L12,
chloroplastic-like [Cucumis sativus]
Length = 193
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/97 (44%), Positives = 59/97 (60%)
Frame = -3
Query: 352 MRLITGVKCLRYSSNLSKRAALSSWDRLFSDVAAGETNSKPKRYKYPAVYEPFGPKAPPS 173
M+L + L+ S +K LS D + N+KPK+YKYPA Y+P+GP+ PPS
Sbjct: 1 MKLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPS 60
Query: 172 EKVLQLADRIAALPPEELKQIGPTLHLRLNQPALHSI 62
+K+++LA+RI ALP E QIGPTL +L P L I
Sbjct: 61 DKIIELAERIVALPAAERCQIGPTLXRKLRHPKLQEI 97
>ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis
sativus]
Length = 193
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/97 (44%), Positives = 59/97 (60%)
Frame = -3
Query: 352 MRLITGVKCLRYSSNLSKRAALSSWDRLFSDVAAGETNSKPKRYKYPAVYEPFGPKAPPS 173
M+L + L+ S +K LS D + N+KPK+YKYPA Y+P+GP+ PPS
Sbjct: 1 MKLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPS 60
Query: 172 EKVLQLADRIAALPPEELKQIGPTLHLRLNQPALHSI 62
+K+++LA+RI ALP E QIGPTL +L P L I
Sbjct: 61 DKIIELAERIVALPAAERCQIGPTLGEKLRHPKLQEI 97
>ref|XP_002282612.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
vinifera]
Length = 193
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/62 (64%), Positives = 46/62 (74%)
Frame = -3
Query: 262 DVAAGETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLADRIAALPPEELKQIGPTLHLRLN 83
D E N+KPKRYKYP Y+P+GPK PPSEKV+ LA+RIAAL PEE QIGP L RL+
Sbjct: 31 DFVPREPNAKPKRYKYPPFYDPYGPKPPPSEKVVGLAERIAALAPEERLQIGPMLKDRLS 90
Query: 82 QP 77
P
Sbjct: 91 LP 92
>ref|XP_006341095.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Solanum
tuberosum]
Length = 194
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = -3
Query: 262 DVAAGETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLADRIAALPPEELKQIGPTLHLRLN 83
D + N+KP RYKYPA Y+P+GP+ PPS+K++QLA+RIAAL PEE +QIGP L L
Sbjct: 31 DFVPRDPNAKPIRYKYPAAYDPYGPRPPPSDKIVQLAERIAALAPEERRQIGPLLREILR 90
Query: 82 QPALHSI 62
P L I
Sbjct: 91 HPNLKQI 97
>gb|ABA40429.1| unknown [Solanum tuberosum]
Length = 194
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = -3
Query: 262 DVAAGETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLADRIAALPPEELKQIGPTLHLRLN 83
D + N+KP RYKYPA Y+P+GP+ PPS+K++QLA+RIAAL PEE +QIGP L L
Sbjct: 31 DFVPRDPNAKPIRYKYPAAYDPYGPRPPPSDKIVQLAERIAALAPEERRQIGPLLREILR 90
Query: 82 QPALHSI 62
P L I
Sbjct: 91 HPNLKQI 97
>ref|XP_004246494.1| PREDICTED: 50S ribosomal protein L12-2, chloroplastic-like isoform
1 [Solanum lycopersicum]
gi|460401984|ref|XP_004246495.1| PREDICTED: 50S
ribosomal protein L12-2, chloroplastic-like isoform 2
[Solanum lycopersicum]
Length = 194
Score = 82.0 bits (201), Expect = 7e-14
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = -3
Query: 262 DVAAGETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLADRIAALPPEELKQIGPTLHLRLN 83
D + N KP RYKYPA Y+P+GP+ PPS+K++QLA+RIAAL PEE +QIGP L L
Sbjct: 31 DFVPRDPNVKPIRYKYPAAYDPYGPRPPPSDKIVQLAERIAALAPEERRQIGPLLREILR 90
Query: 82 QPALHSI 62
P L I
Sbjct: 91 HPTLKPI 97
>gb|EOY20734.1| Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein
ClpS family protein [Theobroma cacao]
Length = 196
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = -3
Query: 262 DVAAGETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLADRIAALPPEELKQIGPTLHLRLN 83
D + N+KPKR+KYP Y+P+GP+ PS+K++QLA+RIA+L PEE +QIGPTL RL
Sbjct: 34 DFVPRDPNAKPKRFKYPQFYDPYGPRPLPSDKIVQLAERIASLLPEERRQIGPTLSERLR 93
Query: 82 QPALHSI 62
P L I
Sbjct: 94 HPKLQPI 100
>ref|XP_002321601.1| ribosomal protein L12 [Populus trichocarpa]
gi|222868597|gb|EEF05728.1| ribosomal protein L12
[Populus trichocarpa]
Length = 195
Score = 81.6 bits (200), Expect = 1e-13
Identities = 35/67 (52%), Positives = 47/67 (70%)
Frame = -3
Query: 262 DVAAGETNSKPKRYKYPAVYEPFGPKAPPSEKVLQLADRIAALPPEELKQIGPTLHLRLN 83
D + +KPK+YKYP Y+P+GP+ PPSEK++++A+RIAALPPEE QIG L +L
Sbjct: 32 DFVPRDPKTKPKKYKYPLYYDPYGPRPPPSEKIIEIAERIAALPPEERSQIGSALGYKLK 91
Query: 82 QPALHSI 62
P L I
Sbjct: 92 HPKLQPI 98
>gb|EXB87892.1| 50S ribosomal protein [Morus notabilis]
Length = 194
Score = 79.0 bits (193), Expect = 6e-13
Identities = 43/98 (43%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = -3
Query: 352 MRLITGVKCLRYSSNLSKRAALSSWDRLFS-DVAAGETNSKPKRYKYPAVYEPFGPKAPP 176
MR+ V+ R S L + R F D + N+KPK+YKYPA Y P+GP+ P
Sbjct: 1 MRIFALVRSFRGGSTLLWKVTGPLQHRSFQHDFIPRDPNAKPKKYKYPAFYNPYGPRPSP 60
Query: 175 SEKVLQLADRIAALPPEELKQIGPTLHLRLNQPALHSI 62
SEK++QLA++I L PEE QIGP L +L P L I
Sbjct: 61 SEKIIQLAEQIVELTPEERCQIGPALAQKLTLPKLQHI 98