BLASTX nr result
ID: Zingiber23_contig00007098
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00007098
(1121 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004969377.1| PREDICTED: 50S ribosomal protein L12, chloro... 107 1e-20
ref|NP_001056357.1| Os05g0568300 [Oryza sativa Japonica Group] g... 105 3e-20
gb|EAY99071.1| hypothetical protein OsI_21028 [Oryza sativa Indi... 105 3e-20
ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloro... 105 3e-20
ref|XP_002456089.1| hypothetical protein SORBIDRAFT_03g030270 [S... 104 6e-20
dbj|BAJ85636.1| predicted protein [Hordeum vulgare subsp. vulgar... 104 7e-20
ref|XP_004961181.1| PREDICTED: 50S ribosomal protein L12, chloro... 103 1e-19
gb|ACG49104.1| 50S ribosomal protein L12-1 [Zea mays] gi|4148811... 103 1e-19
gb|ACG27305.1| 50S ribosomal protein L12-1 [Zea mays] gi|2240314... 103 1e-19
ref|XP_003566962.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 103 2e-19
gb|EMT08204.1| 50S ribosomal protein L12-2, chloroplastic [Aegil... 102 2e-19
ref|XP_006853861.1| hypothetical protein AMTR_s00036p00109340 [A... 102 3e-19
sp|O22386.2|RK12_ORYSJ RecName: Full=50S ribosomal protein L12, ... 100 1e-18
ref|XP_006338570.1| PREDICTED: 50S ribosomal protein L12, chloro... 99 2e-18
sp|Q06030.1|RK121_SECCE RecName: Full=50S ribosomal protein L12-... 99 3e-18
gb|EMJ18373.1| hypothetical protein PRUPE_ppa011994mg [Prunus pe... 98 5e-18
sp|Q06036.1|RK122_SECCE RecName: Full=50S ribosomal protein L12-... 97 9e-18
ref|XP_006338571.1| PREDICTED: 50S ribosomal protein L12, chloro... 97 1e-17
gb|EOY02418.1| Ribosomal protein L12-A [Theobroma cacao] 97 1e-17
sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, ... 97 1e-17
>ref|XP_004969377.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Setaria
italica]
Length = 181
Score = 107 bits (266), Expect = 1e-20
Identities = 74/150 (49%), Positives = 84/150 (56%), Gaps = 18/150 (12%)
Frame = +2
Query: 233 PRRGCRRATFVRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXX 412
PRRG RRA V A SPK+ E+G I+ LTLEEARSLVDHLQ+RLGV+
Sbjct: 34 PRRG-RRAVAVASTATESPKVLELGDAIAGLTLEEARSLVDHLQERLGVTAAAFAPAAVV 92
Query: 413 XXXXXXXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL------------ 556
+TEFDVVI+EVPS+ARIATIKVVRALT+L
Sbjct: 93 AAPGAGGAGAAEEAAPVE-QTEFDVVIDEVPSSARIATIKVVRALTSLALKEAKDLIEGL 151
Query: 557 ------XXXXXXXEEAKKQLEEVGAKVSIV 628
E+AKKQLEEVGAKVSIV
Sbjct: 152 PKKLKEAVSKDEAEDAKKQLEEVGAKVSIV 181
>ref|NP_001056357.1| Os05g0568300 [Oryza sativa Japonica Group]
gi|4176422|dbj|BAA37170.1| ribosomal protein L12 [Oryza
sativa Japonica Group] gi|51038123|gb|AAT93926.1|
putative 50S ribosomal protein L12 [Oryza sativa
Japonica Group] gi|51854291|gb|AAU10672.1| ribosomal
protein L12 [Oryza sativa Japonica Group]
gi|113579908|dbj|BAF18271.1| Os05g0568300 [Oryza sativa
Japonica Group]
Length = 179
Score = 105 bits (263), Expect = 3e-20
Identities = 73/148 (49%), Positives = 79/148 (53%), Gaps = 18/148 (12%)
Frame = +2
Query: 236 RRGCRRATFVRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXXX 415
R G R + AA SPK+ E+G I+ LTLEEAR LVDHLQ+RLGVS
Sbjct: 34 RGGGRHSVACNSTAASSPKVLELGDAIAGLTLEEARGLVDHLQERLGVSAAAFAPAAVVA 93
Query: 416 XXXXXXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL------------- 556
KTEFDVVIEEVPS+ARIATIKVVRALTNL
Sbjct: 94 APGAAGGGEDGAPAE---KTEFDVVIEEVPSSARIATIKVVRALTNLALKEAKDLIEGLP 150
Query: 557 -----XXXXXXXEEAKKQLEEVGAKVSI 625
EEAKKQLEEVGAKVSI
Sbjct: 151 KKAKEAVSKEEAEEAKKQLEEVGAKVSI 178
>gb|EAY99071.1| hypothetical protein OsI_21028 [Oryza sativa Indica Group]
Length = 179
Score = 105 bits (263), Expect = 3e-20
Identities = 73/148 (49%), Positives = 79/148 (53%), Gaps = 18/148 (12%)
Frame = +2
Query: 236 RRGCRRATFVRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXXX 415
R G R + AA SPK+ E+G I+ LTLEEAR LVDHLQ+RLGVS
Sbjct: 34 RGGGRHSVACNSTAASSPKVLELGDAIAGLTLEEARGLVDHLQERLGVSAAAFAPAAVVA 93
Query: 416 XXXXXXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL------------- 556
KTEFDVVIEEVPS+ARIATIKVVRALTNL
Sbjct: 94 APGAAGGGEDGAPAE---KTEFDVVIEEVPSSARIATIKVVRALTNLVLKEAKDLIEGLP 150
Query: 557 -----XXXXXXXEEAKKQLEEVGAKVSI 625
EEAKKQLEEVGAKVSI
Sbjct: 151 KKAKEAVSKEEAEEAKKQLEEVGAKVSI 178
>ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloroplastic [Vitis
vinifera]
Length = 184
Score = 105 bits (262), Expect = 3e-20
Identities = 74/146 (50%), Positives = 83/146 (56%), Gaps = 20/146 (13%)
Frame = +2
Query: 251 RATFVRPPAAVSP--KIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXXXXXX 424
RATFVRP +AV+ KIE+IGT +SNLTLEEAR LVD LQD+LGVS
Sbjct: 43 RATFVRPISAVAAPEKIEKIGTELSNLTLEEARILVDWLQDKLGVSAAAFAPAAVAVAPG 102
Query: 425 XXXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL---------------- 556
KTEFDV+IE+VPSNARIATIK VRALT+L
Sbjct: 103 AVADAPAVVEE----KTEFDVMIEDVPSNARIATIKAVRALTSLALKEAKELIEGLPKKF 158
Query: 557 --XXXXXXXEEAKKQLEEVGAKVSIV 628
EEAKKQLEE GAKV+IV
Sbjct: 159 KEGVSKEEAEEAKKQLEEAGAKVAIV 184
>ref|XP_002456089.1| hypothetical protein SORBIDRAFT_03g030270 [Sorghum bicolor]
gi|241928064|gb|EES01209.1| hypothetical protein
SORBIDRAFT_03g030270 [Sorghum bicolor]
Length = 181
Score = 104 bits (260), Expect = 6e-20
Identities = 74/149 (49%), Positives = 82/149 (55%), Gaps = 18/149 (12%)
Frame = +2
Query: 236 RRGCRRATFVRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXXX 415
RRG RRA A SPKI E+G I+ LTLEEARSLVDHLQ+RLGV+
Sbjct: 37 RRG-RRAVAAACTATESPKILELGDAIAGLTLEEARSLVDHLQERLGVTAAAFAPAAVVA 95
Query: 416 XXXXXXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL------------- 556
KTEFDVVIEEVPS+ARIATIKVVRALT+L
Sbjct: 96 APAGAGAAEEEAPVE---KTEFDVVIEEVPSSARIATIKVVRALTSLALKEAKDLIEGLP 152
Query: 557 -----XXXXXXXEEAKKQLEEVGAKVSIV 628
E+AKKQLEEVGAK+SIV
Sbjct: 153 KKLKEAVSKDEAEDAKKQLEEVGAKISIV 181
>dbj|BAJ85636.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511068|dbj|BAJ91881.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 176
Score = 104 bits (259), Expect = 7e-20
Identities = 72/144 (50%), Positives = 78/144 (54%), Gaps = 18/144 (12%)
Frame = +2
Query: 248 RRATFVRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXXXXXXX 427
RRA V A SPK+ E+G I+ LTLEEAR+LVDHLQ+RLGVS
Sbjct: 37 RRAVAVASTATESPKVLELGDAIAGLTLEEARNLVDHLQERLGVSAASFAPAAAVAAPAA 96
Query: 428 XXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL----------------- 556
KTEFDVVIEEVPS+ARIATIKVVRALTNL
Sbjct: 97 AAAEEAPVE-----KTEFDVVIEEVPSSARIATIKVVRALTNLALKEAKDLIEGLPKKLK 151
Query: 557 -XXXXXXXEEAKKQLEEVGAKVSI 625
EEAKKQLE VGAKVSI
Sbjct: 152 EAVSKDEAEEAKKQLEGVGAKVSI 175
>ref|XP_004961181.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Setaria
italica]
Length = 179
Score = 103 bits (258), Expect = 1e-19
Identities = 72/153 (47%), Positives = 81/153 (52%), Gaps = 18/153 (11%)
Frame = +2
Query: 221 AQSFPRRGCRRATFVRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXX 400
A +FP RG V + SPK+ E+G I+ LTLEEAR LVDHLQ+RLGV+
Sbjct: 27 AVAFPARGRGGRFAVACTSTASPKVLELGDAIAGLTLEEARGLVDHLQERLGVTAAAFAP 86
Query: 401 XXXXXXXXXXXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL-------- 556
KTEFDVVIEEVPS+ARIATIKVVRALTNL
Sbjct: 87 AAVVPAPGAGAAGGEEAAAPVE-KTEFDVVIEEVPSSARIATIKVVRALTNLALKEAKDL 145
Query: 557 ----------XXXXXXXEEAKKQLEEVGAKVSI 625
E+AKKQLEEVGAKVSI
Sbjct: 146 IEGLPKKLKEAVSKDEAEDAKKQLEEVGAKVSI 178
>gb|ACG49104.1| 50S ribosomal protein L12-1 [Zea mays] gi|414881117|tpg|DAA58248.1|
TPA: 50S ribosomal protein L12-1 [Zea mays]
Length = 183
Score = 103 bits (258), Expect = 1e-19
Identities = 74/148 (50%), Positives = 82/148 (55%), Gaps = 18/148 (12%)
Frame = +2
Query: 236 RRGCRRATFVRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXXX 415
RRG RRA V A SPKI E+G I+ LTLEEARSLVDHLQ+RLGV+
Sbjct: 37 RRG-RRAVAVACTATESPKILELGDAIAGLTLEEARSLVDHLQERLGVTAAAFAPAAVVA 95
Query: 416 XXXXXXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL------------- 556
KTEFDV+IEEVPS+ARIATIKVVRALT+L
Sbjct: 96 APGAGGGAAAEEEAPVE-KTEFDVMIEEVPSSARIATIKVVRALTSLALKEAKDLIEGLP 154
Query: 557 -----XXXXXXXEEAKKQLEEVGAKVSI 625
E+AKKQLEEVGAKVSI
Sbjct: 155 KKVKEAVSKDEAEDAKKQLEEVGAKVSI 182
>gb|ACG27305.1| 50S ribosomal protein L12-1 [Zea mays] gi|224031431|gb|ACN34791.1|
unknown [Zea mays] gi|413950823|gb|AFW83472.1| 50S
ribosomal protein L12-1 isoform 1 [Zea mays]
gi|413950824|gb|AFW83473.1| 50S ribosomal protein L12-1
isoform 2 [Zea mays]
Length = 183
Score = 103 bits (257), Expect = 1e-19
Identities = 74/155 (47%), Positives = 83/155 (53%), Gaps = 21/155 (13%)
Frame = +2
Query: 227 SFP---RRGCRRATFVRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXX 397
SFP R RRA V A SPK+ E+G I+ LTLEEAR+LVDHLQ+RLGV+
Sbjct: 30 SFPVPDSRRRRRAVTVASTATESPKVLELGDTIAGLTLEEARNLVDHLQERLGVTAAAFA 89
Query: 398 XXXXXXXXXXXXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL------- 556
KTEFDVVIEEVPS+ARIATIKVVR LT+L
Sbjct: 90 PAAVVAAPGAGGGAAAEEEAPVE-KTEFDVVIEEVPSSARIATIKVVRVLTSLALKEAKD 148
Query: 557 -----------XXXXXXXEEAKKQLEEVGAKVSIV 628
E+AKKQLEEVGAKVSIV
Sbjct: 149 LIEGLPKKLKEAVSKDEAEDAKKQLEEVGAKVSIV 183
>ref|XP_003566962.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L12-2,
chloroplastic-like [Brachypodium distachyon]
Length = 213
Score = 103 bits (256), Expect = 2e-19
Identities = 71/144 (49%), Positives = 78/144 (54%), Gaps = 18/144 (12%)
Frame = +2
Query: 248 RRATFVRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXXXXXXX 427
RRA V A SPK+ E+G I+ LTLEEAR+LVDHLQ+RLGVS
Sbjct: 74 RRAVAVASTATESPKVIELGDAIAGLTLEEARNLVDHLQERLGVSAASFAPAAAVAAPAA 133
Query: 428 XXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL----------------- 556
KTEFDVVIEEVPS+ARIATIKVVRALTNL
Sbjct: 134 AVAEEAPVE-----KTEFDVVIEEVPSSARIATIKVVRALTNLALKEAKDLIEGLPKKLK 188
Query: 557 -XXXXXXXEEAKKQLEEVGAKVSI 625
E+AKKQLE VGAKVSI
Sbjct: 189 EAVSKDEAEDAKKQLEGVGAKVSI 212
>gb|EMT08204.1| 50S ribosomal protein L12-2, chloroplastic [Aegilops tauschii]
Length = 207
Score = 102 bits (255), Expect = 2e-19
Identities = 71/144 (49%), Positives = 77/144 (53%), Gaps = 18/144 (12%)
Frame = +2
Query: 248 RRATFVRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXXXXXXX 427
RRA V SPK+ E+G I+ LTLEEAR+LVDHLQ+RLGVS
Sbjct: 37 RRAVAVASTVTESPKVLELGDAIAGLTLEEARNLVDHLQERLGVSAASFAPAAAVAAPAA 96
Query: 428 XXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL----------------- 556
KTEFDVVIEEVPS+ARIATIKVVRALTNL
Sbjct: 97 AAAEEAPVE-----KTEFDVVIEEVPSSARIATIKVVRALTNLALKEAKDLIEGLPKKLK 151
Query: 557 -XXXXXXXEEAKKQLEEVGAKVSI 625
EEAKKQLE VGAKVSI
Sbjct: 152 EAVSKDEAEEAKKQLEGVGAKVSI 175
>ref|XP_006853861.1| hypothetical protein AMTR_s00036p00109340 [Amborella trichopoda]
gi|548857529|gb|ERN15328.1| hypothetical protein
AMTR_s00036p00109340 [Amborella trichopoda]
Length = 152
Score = 102 bits (254), Expect = 3e-19
Identities = 70/140 (50%), Positives = 76/140 (54%), Gaps = 18/140 (12%)
Frame = +2
Query: 263 VRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXXXXXXXXXXXX 442
V+ AA SPKIE++G IS LTLEEAR LVD LQD+LGVS
Sbjct: 14 VKATAATSPKIEKLGEEISGLTLEEARGLVDWLQDKLGVSAASFAPAIAVPGVAGGAADA 73
Query: 443 XXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL------------------XXXX 568
KTEFDVVIEEVPSN RIATIKVVRALTNL
Sbjct: 74 SAAPVVEE-KTEFDVVIEEVPSNVRIATIKVVRALTNLALKEAKDLIEGLPKKFREGISK 132
Query: 569 XXXEEAKKQLEEVGAKVSIV 628
E+AKKQLE VGAK+SIV
Sbjct: 133 EEAEDAKKQLEAVGAKISIV 152
>sp|O22386.2|RK12_ORYSJ RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
Full=CL12; Flags: Precursor gi|4176424|dbj|BAA37171.1|
ribosomal protein L12 [Oryza sativa Japonica Group]
Length = 185
Score = 100 bits (249), Expect = 1e-18
Identities = 69/144 (47%), Positives = 76/144 (52%), Gaps = 18/144 (12%)
Frame = +2
Query: 248 RRATFVRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXXXXXXX 427
R V A SPK+ E+G I+ LTLEEAR LVDHLQ+RLGVS
Sbjct: 42 RAVAVVASTATESPKVLELGDAIAGLTLEEARGLVDHLQERLGVSAAAFAPAAVVAAPGA 101
Query: 428 XXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL----------------- 556
KTEFDVVIEEVPS+ARIA+IKVVRALTNL
Sbjct: 102 GGAGAAADEAPAE-KTEFDVVIEEVPSSARIASIKVVRALTNLALKEAKDLIEGLPKKVK 160
Query: 557 -XXXXXXXEEAKKQLEEVGAKVSI 625
E+AKKQLEEVGAKVSI
Sbjct: 161 EGVSKDEAEDAKKQLEEVGAKVSI 184
>ref|XP_006338570.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Solanum
tuberosum]
Length = 190
Score = 99.4 bits (246), Expect = 2e-18
Identities = 70/151 (46%), Positives = 82/151 (54%), Gaps = 20/151 (13%)
Frame = +2
Query: 233 PRRGCRRATFVRPPAAVSP--KIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXX 406
P+ RRATFVRP AAV K+ ++G ISNLTL +A+ LV++LQD+LGVS
Sbjct: 42 PKLHHRRATFVRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDKLGVSAASFAPAA 101
Query: 407 XXXXXXXXXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL---------- 556
KTEFDVVI+EVPSNARIATIK VRALT+L
Sbjct: 102 VVAAPGGAAADAPPVVEE---KTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIE 158
Query: 557 --------XXXXXXXEEAKKQLEEVGAKVSI 625
E+AKKQLEE GAKVSI
Sbjct: 159 GLPKKFKEGVSKDEAEDAKKQLEEAGAKVSI 189
>sp|Q06030.1|RK121_SECCE RecName: Full=50S ribosomal protein L12-1, chloroplastic; AltName:
Full=CL12-1; Flags: Precursor
Length = 174
Score = 99.0 bits (245), Expect = 3e-18
Identities = 69/144 (47%), Positives = 77/144 (53%), Gaps = 18/144 (12%)
Frame = +2
Query: 248 RRATFVRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXXXXXXX 427
RRA V A SPK+ E+G I+ LTLEEAR+LVDHLQ+RL VS
Sbjct: 37 RRAAAVASTATESPKVLELGDAIAGLTLEEARNLVDHLQERLCVSAASFPPAAAGLRAAA 96
Query: 428 XXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL----------------- 556
+TEFDVVIEEVPS+ARIATIK+VRALTNL
Sbjct: 97 VEEAPVE-------QTEFDVVIEEVPSSARIATIKIVRALTNLALKEAKDLIEGLPKKLK 149
Query: 557 -XXXXXXXEEAKKQLEEVGAKVSI 625
EEAKKQLE VGAKVSI
Sbjct: 150 EAVSKDEAEEAKKQLEGVGAKVSI 173
>gb|EMJ18373.1| hypothetical protein PRUPE_ppa011994mg [Prunus persica]
Length = 188
Score = 98.2 bits (243), Expect = 5e-18
Identities = 71/146 (48%), Positives = 79/146 (54%), Gaps = 20/146 (13%)
Frame = +2
Query: 251 RATFVRPPAAVSP--KIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXXXXXX 424
RAT +RP AAV KIE++G IS+LTLEEAR LVD LQD+LGVS
Sbjct: 47 RATHLRPLAAVEAPEKIEKLGADISSLTLEEARILVDFLQDKLGVSAAALAPAAAVAAAP 106
Query: 425 XXXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL---------------- 556
KTEFDVVIEEVPSNARIA IK VRALT+L
Sbjct: 107 GAAEGPAVVEE----KTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKF 162
Query: 557 --XXXXXXXEEAKKQLEEVGAKVSIV 628
+EAKKQLEE GAKV+IV
Sbjct: 163 REGISKDEADEAKKQLEEAGAKVAIV 188
>sp|Q06036.1|RK122_SECCE RecName: Full=50S ribosomal protein L12-2, chloroplastic; AltName:
Full=CL12-2; Flags: Precursor gi|288584|emb|CAA48414.1|
ribosomal protein L12 [Secale cereale]
Length = 174
Score = 97.4 bits (241), Expect = 9e-18
Identities = 68/144 (47%), Positives = 76/144 (52%), Gaps = 18/144 (12%)
Frame = +2
Query: 248 RRATFVRPPAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXXXXXXXXX 427
RRA V SPK+ E+G I+ LTLEEAR+LVDHLQ+RL VS
Sbjct: 37 RRAAAVASTVTESPKVLELGDAIAGLTLEEARNLVDHLQERLCVSAASFPPAAAGLRAAA 96
Query: 428 XXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL----------------- 556
+TEFDVVIEEVPS+ARIATIK+VRALTNL
Sbjct: 97 VEEAPVE-------QTEFDVVIEEVPSSARIATIKIVRALTNLALKEAKDLIEGLPKKLK 149
Query: 557 -XXXXXXXEEAKKQLEEVGAKVSI 625
EEAKKQLE VGAKVSI
Sbjct: 150 EAVSKDEAEEAKKQLEGVGAKVSI 173
>ref|XP_006338571.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Solanum
tuberosum]
Length = 190
Score = 97.1 bits (240), Expect = 1e-17
Identities = 69/151 (45%), Positives = 81/151 (53%), Gaps = 20/151 (13%)
Frame = +2
Query: 233 PRRGCRRATFVRPPAAVSP--KIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXX 406
P+ RRATFVRP AAV K+ ++G IS LTL +A+ LV++LQD+LGVS
Sbjct: 42 PKLHHRRATFVRPLAAVEAPEKVVQLGDEISTLTLADAQKLVEYLQDKLGVSAASFAPAA 101
Query: 407 XXXXXXXXXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL---------- 556
KTEFDVVI+EVPSNARIATIK VRALT+L
Sbjct: 102 VVAAPGGAAADAPAVVEE---KTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIE 158
Query: 557 --------XXXXXXXEEAKKQLEEVGAKVSI 625
E+AKKQLEE GAKVSI
Sbjct: 159 GLPKKFKEGVSKDEAEDAKKQLEEAGAKVSI 189
>gb|EOY02418.1| Ribosomal protein L12-A [Theobroma cacao]
Length = 192
Score = 97.1 bits (240), Expect = 1e-17
Identities = 67/151 (44%), Positives = 80/151 (52%), Gaps = 20/151 (13%)
Frame = +2
Query: 233 PRRGCRRATFVRP--PAAVSPKIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXX 406
P R+TF+RP A KIE++G IS+LTLEEAR+LVD+LQ++LGV+
Sbjct: 44 PSNLTHRSTFLRPLNATAAPEKIEKLGNEISSLTLEEARTLVDYLQEKLGVTAAALAPAA 103
Query: 407 XXXXXXXXXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL---------- 556
KTEFDVVIEEVPSNARIA IK VR+LTNL
Sbjct: 104 VAVGGAPGADAGPAAVEE---KTEFDVVIEEVPSNARIAVIKAVRSLTNLALKEAKDLIE 160
Query: 557 --------XXXXXXXEEAKKQLEEVGAKVSI 625
E+AKKQLEE GAKVS+
Sbjct: 161 GLPKKFKEGVSKDEAEDAKKQLEEAGAKVSV 191
>sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
Full=CL12; Flags: Precursor gi|248303|gb|AAB21989.1|
ribosomal protein L12 [Nicotiana sylvestris]
Length = 186
Score = 97.1 bits (240), Expect = 1e-17
Identities = 68/151 (45%), Positives = 82/151 (54%), Gaps = 20/151 (13%)
Frame = +2
Query: 233 PRRGCRRATFVRPPAAVSP--KIEEIGTIISNLTLEEARSLVDHLQDRLGVSXXXXXXXX 406
P+ RRATF+RP AAV K+ ++G ISNLTL +A+ LV++LQD+LGV+
Sbjct: 39 PKLQNRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAA 98
Query: 407 XXXXXXXXXXXXXXXXXXXXXKTEFDVVIEEVPSNARIATIKVVRALTNL---------- 556
KTEFDVVI+EVPSNARIATIK VRALT+L
Sbjct: 99 VVAAPGAAAEAPAVVEE----KTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIE 154
Query: 557 --------XXXXXXXEEAKKQLEEVGAKVSI 625
E+AKKQLEE GAKVSI
Sbjct: 155 GLPKKFKEGVSKDEAEDAKKQLEEAGAKVSI 185