BLASTX nr result
ID: Zingiber23_contig00006108
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00006108
(229 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002310126.1| hypothetical protein POPTR_0007s10740g [Popu... 97 3e-18
ref|XP_006494470.1| PREDICTED: U1 small nuclear ribonucleoprotei... 95 9e-18
ref|XP_006425958.1| hypothetical protein CICLE_v10026071mg [Citr... 95 9e-18
ref|XP_006425957.1| hypothetical protein CICLE_v10026071mg [Citr... 95 9e-18
gb|EMJ08043.1| hypothetical protein PRUPE_ppa027064mg [Prunus pe... 94 1e-17
emb|CBI21383.3| unnamed protein product [Vitis vinifera] 94 1e-17
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247... 94 1e-17
ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotei... 93 4e-17
emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera] 93 4e-17
ref|XP_004511897.1| PREDICTED: U2 small nuclear ribonucleoprotei... 92 9e-17
gb|EOX91506.1| RNA-binding family protein isoform 3 [Theobroma c... 91 1e-16
gb|EOX91505.1| RNA-binding family protein isoform 2, partial [Th... 91 1e-16
gb|EOX91504.1| RNA-binding family protein isoform 1 [Theobroma c... 91 1e-16
ref|XP_006855227.1| hypothetical protein AMTR_s00051p00211030 [A... 91 2e-16
ref|XP_003611682.1| RNA-binding protein with multiple splicing [... 91 2e-16
ref|XP_006657270.1| PREDICTED: protein couch potato-like [Oryza ... 91 2e-16
gb|EPS61714.1| hypothetical protein M569_13079, partial [Genlise... 89 5e-16
ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotei... 89 8e-16
ref|XP_006339867.1| PREDICTED: U1 small nuclear ribonucleoprotei... 88 1e-15
ref|XP_006339866.1| PREDICTED: U1 small nuclear ribonucleoprotei... 88 1e-15
>ref|XP_002310126.1| hypothetical protein POPTR_0007s10740g [Populus trichocarpa]
gi|222853029|gb|EEE90576.1| hypothetical protein
POPTR_0007s10740g [Populus trichocarpa]
Length = 323
Score = 96.7 bits (239), Expect = 3e-18
Identities = 48/76 (63%), Positives = 61/76 (80%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
+SQ +AFA FTDQ SA+AAMH+LNG+VFDLE+ STL+IDLAKSNS+SKR RTD+ S D
Sbjct: 110 NSQPFAFATFTDQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDEWSSLD 169
Query: 49 RRVRVSAAYSRDFRDS 2
++ RVS+ +S DS
Sbjct: 170 KKARVSSGFSMGTPDS 185
>ref|XP_006494470.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Citrus
sinensis]
Length = 326
Score = 95.1 bits (235), Expect = 9e-18
Identities = 47/75 (62%), Positives = 61/75 (81%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
+SQ +AFAVF+DQQSAL AM++LNG+VFDLE+ STL+IDLAKSNS+SKR RTD+ SD
Sbjct: 106 NSQPFAFAVFSDQQSALGAMYALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDEWTGSD 165
Query: 49 RRVRVSAAYSRDFRD 5
++ R +A+SR D
Sbjct: 166 KKARGPSAFSRGTAD 180
>ref|XP_006425958.1| hypothetical protein CICLE_v10026071mg [Citrus clementina]
gi|557527948|gb|ESR39198.1| hypothetical protein
CICLE_v10026071mg [Citrus clementina]
Length = 326
Score = 95.1 bits (235), Expect = 9e-18
Identities = 47/75 (62%), Positives = 61/75 (81%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
+SQ +AFAVF+DQQSAL AM++LNG+VFDLE+ STL+IDLAKSNS+SKR RTD+ SD
Sbjct: 102 NSQPFAFAVFSDQQSALGAMYALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDEWTGSD 161
Query: 49 RRVRVSAAYSRDFRD 5
++ R +A+SR D
Sbjct: 162 KKARGPSAFSRGTAD 176
>ref|XP_006425957.1| hypothetical protein CICLE_v10026071mg [Citrus clementina]
gi|557527947|gb|ESR39197.1| hypothetical protein
CICLE_v10026071mg [Citrus clementina]
Length = 322
Score = 95.1 bits (235), Expect = 9e-18
Identities = 47/75 (62%), Positives = 61/75 (81%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
+SQ +AFAVF+DQQSAL AM++LNG+VFDLE+ STL+IDLAKSNS+SKR RTD+ SD
Sbjct: 102 NSQPFAFAVFSDQQSALGAMYALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDEWTGSD 161
Query: 49 RRVRVSAAYSRDFRD 5
++ R +A+SR D
Sbjct: 162 KKARGPSAFSRGTAD 176
>gb|EMJ08043.1| hypothetical protein PRUPE_ppa027064mg [Prunus persica]
Length = 328
Score = 94.4 bits (233), Expect = 1e-17
Identities = 48/75 (64%), Positives = 60/75 (80%)
Frame = -1
Query: 226 SQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSDR 47
SQ +AFAVF DQQSA+ AMH+LNG+VFDLE+ STL+IDLAKSNS+SKR RTD+ SD+
Sbjct: 110 SQPFAFAVFLDQQSAIGAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDERSGSDK 169
Query: 46 RVRVSAAYSRDFRDS 2
+ R ++YSR DS
Sbjct: 170 KAR-GSSYSRGAPDS 183
>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 94.4 bits (233), Expect = 1e-17
Identities = 46/71 (64%), Positives = 59/71 (83%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
+SQ +AFAVF DQQSA+AAMH+LNG+VFDLE+ STL+IDLAKSNS+SKR R D+ D
Sbjct: 115 NSQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGLD 174
Query: 49 RRVRVSAAYSR 17
++V+ SA +SR
Sbjct: 175 KKVKGSAGFSR 185
>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 94.4 bits (233), Expect = 1e-17
Identities = 46/71 (64%), Positives = 59/71 (83%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
+SQ +AFAVF DQQSA+AAMH+LNG+VFDLE+ STL+IDLAKSNS+SKR R D+ D
Sbjct: 118 NSQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGLD 177
Query: 49 RRVRVSAAYSR 17
++V+ SA +SR
Sbjct: 178 KKVKGSAGFSR 188
>ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Cucumis sativus]
Length = 306
Score = 92.8 bits (229), Expect = 4e-17
Identities = 41/66 (62%), Positives = 58/66 (87%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
++Q +AFAVF+DQQSA+ AMH++NG+VFDLE++S L++DLAKSNS+SKR RT+E Y SD
Sbjct: 105 TTQPFAFAVFSDQQSAVGAMHAVNGMVFDLEKQSVLYVDLAKSNSRSKRTRTEEERYGSD 164
Query: 49 RRVRVS 32
++ +VS
Sbjct: 165 KKAKVS 170
>emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
Length = 335
Score = 92.8 bits (229), Expect = 4e-17
Identities = 45/71 (63%), Positives = 58/71 (81%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
+SQ +AFAVF DQQSA+A MH+LNG+VFDLE+ STL+IDLAKSNS+SKR R D+ D
Sbjct: 115 NSQPFAFAVFLDQQSAIATMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGLD 174
Query: 49 RRVRVSAAYSR 17
++V+ SA +SR
Sbjct: 175 KKVKGSAGFSR 185
>ref|XP_004511897.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cicer
arietinum]
Length = 326
Score = 91.7 bits (226), Expect = 9e-17
Identities = 45/67 (67%), Positives = 57/67 (85%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
SSQA+AFAVF +QQSA+ AMH+LNG+VFDLE+ STL+IDLAKSNS++KR R D+ SSD
Sbjct: 105 SSQAFAFAVFVNQQSAIMAMHALNGMVFDLEKGSTLYIDLAKSNSRAKRARIDDERASSD 164
Query: 49 RRVRVSA 29
++ R SA
Sbjct: 165 KKARGSA 171
>gb|EOX91506.1| RNA-binding family protein isoform 3 [Theobroma cacao]
Length = 233
Score = 91.3 bits (225), Expect = 1e-16
Identities = 47/76 (61%), Positives = 60/76 (78%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
+SQ +AFAVF+DQQSA+AAM +LNG+VFDLE+ STL ID AKSNS+SKRPRTD+ SD
Sbjct: 121 NSQPFAFAVFSDQQSAIAAMQALNGMVFDLEKGSTLFIDFAKSNSRSKRPRTDDEWTGSD 180
Query: 49 RRVRVSAAYSRDFRDS 2
++ R ++SR DS
Sbjct: 181 KKSR--GSFSRPTTDS 194
>gb|EOX91505.1| RNA-binding family protein isoform 2, partial [Theobroma cacao]
Length = 243
Score = 91.3 bits (225), Expect = 1e-16
Identities = 47/76 (61%), Positives = 60/76 (78%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
+SQ +AFAVF+DQQSA+AAM +LNG+VFDLE+ STL ID AKSNS+SKRPRTD+ SD
Sbjct: 121 NSQPFAFAVFSDQQSAIAAMQALNGMVFDLEKGSTLFIDFAKSNSRSKRPRTDDEWTGSD 180
Query: 49 RRVRVSAAYSRDFRDS 2
++ R ++SR DS
Sbjct: 181 KKSR--GSFSRPTTDS 194
>gb|EOX91504.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 327
Score = 91.3 bits (225), Expect = 1e-16
Identities = 47/76 (61%), Positives = 60/76 (78%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
+SQ +AFAVF+DQQSA+AAM +LNG+VFDLE+ STL ID AKSNS+SKRPRTD+ SD
Sbjct: 121 NSQPFAFAVFSDQQSAIAAMQALNGMVFDLEKGSTLFIDFAKSNSRSKRPRTDDEWTGSD 180
Query: 49 RRVRVSAAYSRDFRDS 2
++ R ++SR DS
Sbjct: 181 KKSR--GSFSRPTTDS 194
>ref|XP_006855227.1| hypothetical protein AMTR_s00051p00211030 [Amborella trichopoda]
gi|548858980|gb|ERN16694.1| hypothetical protein
AMTR_s00051p00211030 [Amborella trichopoda]
Length = 327
Score = 90.9 bits (224), Expect = 2e-16
Identities = 50/77 (64%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTD-ESTYSS 53
S+QA+AFAVF+DQQSA++AMH+LNGL FDLE ESTLHIDLAKSNS++KR RTD + + S
Sbjct: 112 SNQAFAFAVFSDQQSAVSAMHTLNGLEFDLEFESTLHIDLAKSNSRTKRSRTDNDGSGSF 171
Query: 52 DRRVRVSAAYSRDFRDS 2
D++VR A R DS
Sbjct: 172 DKKVRGFATGLRGPLDS 188
>ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355513017|gb|AES94640.1| RNA-binding protein with
multiple splicing [Medicago truncatula]
Length = 340
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/68 (63%), Positives = 59/68 (86%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
SSQA+AFAVF++QQSA+ A+H+LNG++FDLE+ STL+IDLAKSNS++KR R D+ SSD
Sbjct: 119 SSQAFAFAVFSNQQSAIMALHALNGMIFDLEKGSTLYIDLAKSNSRAKRARIDDDRASSD 178
Query: 49 RRVRVSAA 26
++ R SA+
Sbjct: 179 KKARGSAS 186
>ref|XP_006657270.1| PREDICTED: protein couch potato-like [Oryza brachyantha]
Length = 297
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/70 (64%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDE-STYSS 53
SSQAYAFA+F DQ SALAAM + NG++FDLE STLH+DLAKSNS+SKR RTD+ YSS
Sbjct: 86 SSQAYAFAIFADQPSALAAMSATNGMIFDLENNSTLHVDLAKSNSRSKRSRTDDVPPYSS 145
Query: 52 DRRVRVSAAY 23
+++ R Y
Sbjct: 146 EKKARNPRGY 155
>gb|EPS61714.1| hypothetical protein M569_13079, partial [Genlisea aurea]
Length = 304
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/74 (62%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
+SQ +AFA F+DQ SA+ AMHSLNGLVFDLE STL+I+LAKSNS+SKR RTD+ S+
Sbjct: 93 NSQPFAFATFSDQPSAILAMHSLNGLVFDLETGSTLYINLAKSNSRSKRSRTDDDNQDSE 152
Query: 49 RRVR-VSAAYSRDF 11
+R + SA++SR F
Sbjct: 153 KRFKGESASFSRGF 166
>ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Fragaria
vesca subsp. vesca]
Length = 327
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/74 (60%), Positives = 58/74 (78%)
Frame = -1
Query: 226 SQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSDR 47
+Q +AFAVF DQQSA+ AM +LNG+VFDLE+ STL+IDLAKSNS+SKR RTD+ SD+
Sbjct: 109 TQPFAFAVFLDQQSAIGAMQALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDERSGSDK 168
Query: 46 RVRVSAAYSRDFRD 5
+ R ++YSR D
Sbjct: 169 KAR-GSSYSRATSD 181
>ref|XP_006339867.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X2
[Solanum tuberosum]
Length = 315
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/72 (61%), Positives = 57/72 (79%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
+SQ +AFAVF DQ SAL AM+ LNG+VFD E++S L+I+LAKSNSKSKR R D+ S+
Sbjct: 107 NSQPFAFAVFADQHSALMAMYELNGMVFDFEKDSKLYIELAKSNSKSKRLRPDDGRPVSE 166
Query: 49 RRVRVSAAYSRD 14
+R++ SAA SRD
Sbjct: 167 KRIKGSAAISRD 178
>ref|XP_006339866.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
[Solanum tuberosum]
Length = 316
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/72 (61%), Positives = 57/72 (79%)
Frame = -1
Query: 229 SSQAYAFAVFTDQQSALAAMHSLNGLVFDLERESTLHIDLAKSNSKSKRPRTDESTYSSD 50
+SQ +AFAVF DQ SAL AM+ LNG+VFD E++S L+I+LAKSNSKSKR R D+ S+
Sbjct: 107 NSQPFAFAVFADQHSALMAMYELNGMVFDFEKDSKLYIELAKSNSKSKRLRPDDGRPVSE 166
Query: 49 RRVRVSAAYSRD 14
+R++ SAA SRD
Sbjct: 167 KRIKGSAAISRD 178