BLASTX nr result
ID: Zingiber23_contig00005910
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00005910
(250 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGG37284.1| alpha-tubulin 2 [Salix arbutifolia] 95 1e-17
ref|XP_002303998.1| alpha-tubulin 2 family protein [Populus tric... 95 1e-17
gb|AAT68202.1| alpha 1 tubulin [Cynodon dactylon] 95 1e-17
ref|NP_197478.1| tubulin alpha-3 [Arabidopsis thaliana] gi|15241... 94 1e-17
gb|EPS65641.1| hypothetical protein M569_09137, partial [Genlise... 94 1e-17
ref|XP_006286795.1| hypothetical protein CARUB_v10003470mg [Caps... 94 1e-17
ref|XP_006286664.1| hypothetical protein CARUB_v10002583mg [Caps... 94 1e-17
ref|XP_004504311.1| PREDICTED: tubulin alpha-3 chain-like [Cicer... 94 2e-17
dbj|BAJ06365.1| alpha-tubulin [Alopecurus aequalis] 94 2e-17
ref|XP_003629736.1| Alpha-tubulin [Medicago truncatula] gi|35552... 94 2e-17
ref|NP_001060075.1| Os07g0574800 [Oryza sativa Japonica Group] g... 94 2e-17
ref|XP_006579487.1| PREDICTED: tubulin A isoform X1 [Glycine max] 94 2e-17
ref|XP_006858944.1| hypothetical protein AMTR_s00068p00090790 [A... 94 2e-17
ref|NP_001237301.1| tubulin A [Glycine max] gi|62546341|gb|AAX86... 94 2e-17
emb|CAD32380.1| tubulin [Oryza sativa Indica Group] 94 2e-17
gb|EXC34492.1| Tubulin alpha-3 chain [Morus notabilis] 93 3e-17
ref|XP_004985171.1| PREDICTED: tubulin alpha-2 chain-like [Setar... 93 3e-17
gb|AFW89176.1| hypothetical protein ZEAMMB73_322393 [Zea mays] 93 3e-17
ref|XP_003558477.1| PREDICTED: tubulin alpha-2 chain-like [Brach... 93 3e-17
dbj|BAJ86161.1| predicted protein [Hordeum vulgare subsp. vulgar... 93 3e-17
>gb|AGG37284.1| alpha-tubulin 2 [Salix arbutifolia]
Length = 450
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGNACWELYCLEHGIQPDG+MPSD++VG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGVMPSDASVGVAHD 47
>ref|XP_002303998.1| alpha-tubulin 2 family protein [Populus trichocarpa]
gi|222841430|gb|EEE78977.1| alpha-tubulin 2 family
protein [Populus trichocarpa]
Length = 450
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGNACWELYCLEHGIQPDG+MPSD++VG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGVMPSDASVGVAHD 47
>gb|AAT68202.1| alpha 1 tubulin [Cynodon dactylon]
Length = 141
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGNACWELYCLEHGIQPDG MPSD+TVG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGTMPSDTTVGVAHD 47
>ref|NP_197478.1| tubulin alpha-3 [Arabidopsis thaliana] gi|15241179|ref|NP_197479.1|
tubulin alpha-5 [Arabidopsis thaliana]
gi|297808045|ref|XP_002871906.1| tubulin alpha-3
[Arabidopsis lyrata subsp. lyrata]
gi|297812159|ref|XP_002873963.1| tubulin alpha-3
[Arabidopsis lyrata subsp. lyrata]
gi|567175789|ref|XP_006400538.1| hypothetical protein
EUTSA_v10013521mg [Eutrema salsugineum]
gi|567175793|ref|XP_006400540.1| hypothetical protein
EUTSA_v10013523mg [Eutrema salsugineum]
gi|408407916|sp|Q56WH1.2|TBA3_ARATH RecName:
Full=Tubulin alpha-3 chain
gi|408407918|sp|B9DHQ0.2|TBA5_ARATH RecName:
Full=Tubulin alpha-5 chain
gi|13605805|gb|AAK32888.1|AF367301_1
AT5g19770/T29J13_190 [Arabidopsis thaliana]
gi|166912|gb|AAA32888.1| alpha-tubulin [Arabidopsis
thaliana] gi|166918|gb|AAA32891.1| alpha-5 tubulin
[Arabidopsis thaliana] gi|14532776|gb|AAK64169.1|
putative tubulin alpha-5 chain [Arabidopsis thaliana]
gi|17473826|gb|AAL38340.1| unknown protein [Arabidopsis
thaliana] gi|19310733|gb|AAL85097.1| putative tubulin
alpha-5 chain [Arabidopsis thaliana]
gi|23397154|gb|AAN31860.1| putative tubulin alpha-5
chain [Arabidopsis thaliana] gi|23397156|gb|AAN31861.1|
putative tubulin alpha-5 chain [Arabidopsis thaliana]
gi|23505949|gb|AAN28834.1| At5g19770/T29J13_190
[Arabidopsis thaliana] gi|24899739|gb|AAN65084.1|
unknown protein [Arabidopsis thaliana]
gi|297317743|gb|EFH48165.1| tubulin alpha-3 [Arabidopsis
lyrata subsp. lyrata] gi|297319800|gb|EFH50222.1|
tubulin alpha-3 [Arabidopsis lyrata subsp. lyrata]
gi|332005364|gb|AED92747.1| tubulin alpha-3 [Arabidopsis
thaliana] gi|332005365|gb|AED92748.1| tubulin alpha-5
[Arabidopsis thaliana] gi|557101628|gb|ESQ41991.1|
hypothetical protein EUTSA_v10013521mg [Eutrema
salsugineum] gi|557101630|gb|ESQ41993.1| hypothetical
protein EUTSA_v10013523mg [Eutrema salsugineum]
Length = 450
Score = 94.4 bits (233), Expect = 1e-17
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDG+MPSD+TVG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHD 47
>gb|EPS65641.1| hypothetical protein M569_09137, partial [Genlisea aurea]
Length = 109
Score = 94.4 bits (233), Expect = 1e-17
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDG+MPSD+TVG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHD 47
>ref|XP_006286795.1| hypothetical protein CARUB_v10003470mg [Capsella rubella]
gi|482555501|gb|EOA19693.1| hypothetical protein
CARUB_v10003470mg [Capsella rubella]
Length = 450
Score = 94.4 bits (233), Expect = 1e-17
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDG+MPSD+TVG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHD 47
>ref|XP_006286664.1| hypothetical protein CARUB_v10002583mg [Capsella rubella]
gi|482555370|gb|EOA19562.1| hypothetical protein
CARUB_v10002583mg [Capsella rubella]
Length = 450
Score = 94.4 bits (233), Expect = 1e-17
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDG+MPSD+TVG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHD 47
>ref|XP_004504311.1| PREDICTED: tubulin alpha-3 chain-like [Cicer arietinum]
Length = 449
Score = 94.0 bits (232), Expect = 2e-17
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDG+MPSDS+VG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDSSVGVAHD 47
>dbj|BAJ06365.1| alpha-tubulin [Alopecurus aequalis]
Length = 449
Score = 94.0 bits (232), Expect = 2e-17
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDGIMPSD++VG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGIMPSDTSVGVAKD 47
>ref|XP_003629736.1| Alpha-tubulin [Medicago truncatula] gi|355523758|gb|AET04212.1|
Alpha-tubulin [Medicago truncatula]
Length = 449
Score = 94.0 bits (232), Expect = 2e-17
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDG+MPSDS+VG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDSSVGVAHD 47
>ref|NP_001060075.1| Os07g0574800 [Oryza sativa Japonica Group]
gi|135399|sp|P28752.1|TBA1_ORYSJ RecName: Full=Tubulin
alpha-1 chain gi|20379|emb|CAA77988.1| alpha 1 tubulin
[Oryza sativa Japonica Group] gi|1136124|emb|CAA62918.1|
alfa-tubulin [Oryza sativa Japonica Group]
gi|34393570|dbj|BAC83168.1| Tubulin alpha-1 chain [Oryza
sativa Japonica Group] gi|50509129|dbj|BAD30236.1|
Tubulin alpha-1 chain [Oryza sativa Japonica Group]
gi|110617750|gb|ABG78594.1| alpha-tubulin [Oryza sativa
Japonica Group] gi|113611611|dbj|BAF21989.1|
Os07g0574800 [Oryza sativa Japonica Group]
gi|125558900|gb|EAZ04436.1| hypothetical protein
OsI_26583 [Oryza sativa Indica Group]
gi|125600815|gb|EAZ40391.1| hypothetical protein
OsJ_24840 [Oryza sativa Japonica Group]
gi|215695370|dbj|BAG90561.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215697286|dbj|BAG91280.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740861|dbj|BAG97017.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|461488123|gb|AGH17548.1| alpha tubulin [Oryza sativa]
Length = 450
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGNACWELYCLEHGI+PDG MPSD+TVG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHD 47
>ref|XP_006579487.1| PREDICTED: tubulin A isoform X1 [Glycine max]
Length = 449
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDG+MPSDST G+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDSTFGVAHD 47
>ref|XP_006858944.1| hypothetical protein AMTR_s00068p00090790 [Amborella trichopoda]
gi|548863056|gb|ERN20411.1| hypothetical protein
AMTR_s00068p00090790 [Amborella trichopoda]
Length = 449
Score = 93.6 bits (231), Expect = 2e-17
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDGIMPSD+++G+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGIMPSDNSIGVAHD 47
>ref|NP_001237301.1| tubulin A [Glycine max] gi|62546341|gb|AAX86047.1| tubulin A
[Glycine max]
Length = 450
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDG+MPSDST G+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDSTFGVAHD 47
>emb|CAD32380.1| tubulin [Oryza sativa Indica Group]
Length = 85
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGNACWELYCLEHGI+PDG MPSD+TVG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHD 47
>gb|EXC34492.1| Tubulin alpha-3 chain [Morus notabilis]
Length = 449
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDG+MPSD+TVG++ D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVSHD 47
>ref|XP_004985171.1| PREDICTED: tubulin alpha-2 chain-like [Setaria italica]
Length = 448
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDG+MPSD++VG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVARD 47
>gb|AFW89176.1| hypothetical protein ZEAMMB73_322393 [Zea mays]
Length = 448
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDG+MPSD++VG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGIARD 47
>ref|XP_003558477.1| PREDICTED: tubulin alpha-2 chain-like [Brachypodium distachyon]
Length = 449
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDG+MPSD++VG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAKD 47
>dbj|BAJ86161.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518648|dbj|BAJ88353.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 449
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/47 (87%), Positives = 46/47 (97%)
Frame = -3
Query: 143 MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGIMPSDSTVGMACD 3
MREIISIHIGQAGIQVGN+CWELYCLEHGIQPDG+MPSD++VG+A D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAKD 47