BLASTX nr result
ID: Zingiber23_contig00005796
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00005796
(1062 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei... 399 e-108
emb|CBI36876.3| unnamed protein product [Vitis vinifera] 396 e-108
ref|XP_004494379.1| PREDICTED: U1 small nuclear ribonucleoprotei... 389 e-106
gb|ESW19238.1| hypothetical protein PHAVU_006G108000g [Phaseolus... 384 e-104
gb|ACJ84781.1| unknown [Medicago truncatula] 384 e-104
ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotei... 383 e-104
ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanu... 383 e-104
gb|AFK36658.1| unknown [Medicago truncatula] 382 e-103
gb|ACU24174.1| unknown [Glycine max] 381 e-103
ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycin... 378 e-102
ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotei... 378 e-102
ref|XP_006397952.1| hypothetical protein EUTSA_v10001603mg [Eutr... 375 e-101
ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, p... 370 e-100
ref|XP_006294873.1| hypothetical protein CARUB_v10023926mg [Caps... 369 e-100
ref|XP_006444378.1| hypothetical protein CICLE_v10021907mg [Citr... 368 2e-99
ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arab... 368 2e-99
ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]... 368 2e-99
ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotei... 367 4e-99
ref|XP_002320337.2| SPLICEOSOMAL protein U1A [Populus trichocarp... 367 6e-99
ref|XP_002302719.1| predicted protein [Populus trichocarpa] 366 9e-99
>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
Length = 245
Score = 399 bits (1024), Expect = e-108
Identities = 199/234 (85%), Positives = 214/234 (91%), Gaps = 4/234 (1%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
NMTIYINNLNEKIKL+ELKKSL AVFSQFGKI+EVLAFKTLKHKGQAWV+FE+VSSAT A
Sbjct: 13 NMTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNA 72
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYAKTKSD+IAKADGTFVPRERR+RHDDRA RK+R+ HD+ QA
Sbjct: 73 LRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRRE-QHDANQA 131
Query: 474 GAGLNSAYSGAYGAVPPL---PYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 644
G G+N AY GAYGA PPL PY GG+KS +PEAPA PNNILF+QNLPHE TPMMLQMFF
Sbjct: 132 GVGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFF 191
Query: 645 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 803
CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQG KI QNPMLITYAKK
Sbjct: 192 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 245
>emb|CBI36876.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 396 bits (1018), Expect = e-108
Identities = 198/233 (84%), Positives = 213/233 (91%), Gaps = 4/233 (1%)
Frame = +3
Query: 117 MTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEAL 296
MTIYINNLNEKIKL+ELKKSL AVFSQFGKI+EVLAFKTLKHKGQAWV+FE+VSSAT AL
Sbjct: 1 MTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNAL 60
Query: 297 KRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQAG 476
++MQGFPFYDKPMRIQYAKTKSD+IAKADGTFVPRERR+RHDDRA RK+R+ HD+ QAG
Sbjct: 61 RQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRRE-QHDANQAG 119
Query: 477 AGLNSAYSGAYGAVPPL---PYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFFC 647
G+N AY GAYGA PPL PY GG+KS +PEAPA PNNILF+QNLPHE TPMMLQMFFC
Sbjct: 120 VGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFC 179
Query: 648 QYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 803
QYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQG KI QNPMLITYAKK
Sbjct: 180 QYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 232
>ref|XP_004494379.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cicer
arietinum]
Length = 241
Score = 389 bits (1000), Expect = e-106
Identities = 194/231 (83%), Positives = 209/231 (90%), Gaps = 1/231 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
NMTIYINNLNEKIK++ELKKSL AVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSA+ A
Sbjct: 13 NMTIYINNLNEKIKIEELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNA 72
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYA+TKSDIIAKADGTFVPRE+RKRHDD+ KKR HD+ A
Sbjct: 73 LRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPREKRKRHDDKG--KKRKDQHDANLA 130
Query: 474 GAGLNSAYSGAYGAVPPLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFFCQY 653
G GLN +Y GAYGA P +PY GG+KSM+PEAPA PNNILF+QNLP+ETTPMMLQM F QY
Sbjct: 131 GMGLNPSYPGAYGATPAIPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLFLQY 190
Query: 654 PGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 803
PGFKEVRMVE KPGIAFVEYGDEMQSTVAMQ LQGFKIT QNPMLITYAKK
Sbjct: 191 PGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 241
>gb|ESW19238.1| hypothetical protein PHAVU_006G108000g [Phaseolus vulgaris]
Length = 241
Score = 384 bits (986), Expect = e-104
Identities = 189/231 (81%), Positives = 208/231 (90%), Gaps = 1/231 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINN+NEKIK++ELKKSL AVF+QFGKILEVLAFKTLKHKGQAWV+FEDVSSA+ A
Sbjct: 13 NNTIYINNINEKIKIEELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDVSSASNA 72
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPM+IQYAKTKSD+IAKADGTFVPRE+RKRHDD+ KKR HD+ A
Sbjct: 73 LRQMQGFPFYDKPMKIQYAKTKSDVIAKADGTFVPREKRKRHDDKG--KKRKDQHDANLA 130
Query: 474 GAGLNSAYSGAYGAVPPLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFFCQY 653
G GLN AYSG YGA P +PY GG+KSM+PEAPA PNNILF+QNLP+E+TPMMLQM F QY
Sbjct: 131 GMGLNPAYSGGYGATPTIPYPGGAKSMVPEAPAPPNNILFIQNLPNESTPMMLQMLFLQY 190
Query: 654 PGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 803
PGFKEVRMVE KPGIAFVEYGDEMQSTVAMQ LQGFKIT QNPMLITYAKK
Sbjct: 191 PGFKEVRMVETKPGIAFVEYGDEMQSTVAMQSLQGFKITPQNPMLITYAKK 241
>gb|ACJ84781.1| unknown [Medicago truncatula]
Length = 245
Score = 384 bits (986), Expect = e-104
Identities = 192/234 (82%), Positives = 213/234 (91%), Gaps = 4/234 (1%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
NMTIYINNLNEKIK+DELKKSL AVFSQFGKILEVLAFKTLKHKGQAWVIFEDV+SA+ A
Sbjct: 13 NMTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTSASNA 72
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYA+TKSD+IAKA+GTFVPRE+RKRHDD+A +K++D +D+ A
Sbjct: 73 LRQMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVPREKRKRHDDKAGKKRKD-QNDANLA 131
Query: 474 GAGLNSAYSGAYGAVPPL---PYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 644
G GLN AY+GAYGA P L PY GG+KS+LPEAPA PNNILF+QNLP+ETTPMMLQM F
Sbjct: 132 GTGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMMLQMLF 191
Query: 645 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 803
QYPGFKEVRMVEAKPGIAFVEYGDEMQST+AMQ LQGFKI QNPMLITYAKK
Sbjct: 192 LQYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 245
>ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
Length = 241
Score = 383 bits (983), Expect = e-104
Identities = 191/231 (82%), Positives = 208/231 (90%), Gaps = 1/231 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINNLNEKIK+DELKKSL AVF+QFGKILEVLAFKTLKHKGQAWV+FED SSA+ A
Sbjct: 13 NNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNA 72
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRE+RKRHD++A KKR HDS A
Sbjct: 73 LRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDEKA--KKRKDQHDSNLA 130
Query: 474 GAGLNSAYSGAYGAVPPLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFFCQY 653
G GLN AY+GAYGA P + Y GG+KSM+PEAPA PNNILF+QNLP+++TPMMLQM F QY
Sbjct: 131 GMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQY 190
Query: 654 PGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 803
PGFKEVRMVE KPGIAFVEYGDEMQSTVAMQ LQGFKIT QNPMLITYAKK
Sbjct: 191 PGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241
>ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanum tuberosum]
gi|1050840|emb|CAA90282.1| U1snRNP-specific protein, U1A
[Solanum tuberosum]
Length = 253
Score = 383 bits (983), Expect = e-104
Identities = 189/234 (80%), Positives = 214/234 (91%), Gaps = 4/234 (1%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N+TIYINNLNEKIKL+ELKKS+ AVFSQFGKILEVLAFKTLKHKGQAWV+FE+VSSA+ A
Sbjct: 22 NVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFEEVSSASNA 81
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYAKTKSD++AKADGTFVPRE+RKRH+D+ RKK+D DS QA
Sbjct: 82 LRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKG-RKKKD-QQDSNQA 139
Query: 474 GAGLNSAYSGAYGAVPP---LPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 644
G GLN AY+GAYGA PP +PY GG+K+ +PEAPA PN+ILFVQNLPH++TPMMLQM F
Sbjct: 140 GMGLNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQMLF 199
Query: 645 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 803
CQYPGFKEVRM+EAKPGIAF+EYGDEMQSTVAMQ LQGFKIT +NPMLITYAKK
Sbjct: 200 CQYPGFKEVRMIEAKPGIAFIEYGDEMQSTVAMQALQGFKITAENPMLITYAKK 253
>gb|AFK36658.1| unknown [Medicago truncatula]
Length = 232
Score = 382 bits (980), Expect = e-103
Identities = 191/233 (81%), Positives = 212/233 (90%), Gaps = 4/233 (1%)
Frame = +3
Query: 117 MTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEAL 296
MTIYINNLNEKIK+DELKKSL AVFSQFGKILEVLAFKTLKHKGQAWVIFEDV+SA+ AL
Sbjct: 1 MTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTSASNAL 60
Query: 297 KRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQAG 476
++MQGFPFYDKPMRIQYA+TKSD+IAKA+GTFVPRE+RKRHDD+A +K++D +D+ AG
Sbjct: 61 RQMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVPREKRKRHDDKAGKKRKD-QNDANLAG 119
Query: 477 AGLNSAYSGAYGAVPPL---PYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFFC 647
GLN AY+GAYGA P L PY GG+KS+LPEAPA PNNILF+QNLP+ETTPMMLQM F
Sbjct: 120 TGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMMLQMLFL 179
Query: 648 QYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 803
QYPGFKEVRMVEAKPGIAFVEYGDEMQST+AMQ LQGFKI QNPMLITYAKK
Sbjct: 180 QYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 232
>gb|ACU24174.1| unknown [Glycine max]
Length = 241
Score = 381 bits (978), Expect = e-103
Identities = 190/231 (82%), Positives = 207/231 (89%), Gaps = 1/231 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N IYINNLNEKIK+DELKKSL AVF+QFGKILEVLAFKTLKHKGQAWV+FED SSA+ A
Sbjct: 13 NNAIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNA 72
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRE+RKRHD++A KKR HDS A
Sbjct: 73 LRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDEKA--KKRKDQHDSNLA 130
Query: 474 GAGLNSAYSGAYGAVPPLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFFCQY 653
G GLN AY+GAYGA P + Y GG+KSM+PEAPA PNNILF+QNLP+++TPMMLQM F QY
Sbjct: 131 GMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQY 190
Query: 654 PGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 803
PGFKEVRMVE KPGIAFVEYGDEMQSTVAMQ LQGFKIT QNPMLITYAKK
Sbjct: 191 PGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241
>ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycine max]
gi|255628437|gb|ACU14563.1| unknown [Glycine max]
Length = 241
Score = 378 bits (971), Expect = e-102
Identities = 189/229 (82%), Positives = 206/229 (89%), Gaps = 1/229 (0%)
Frame = +3
Query: 120 TIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEALK 299
TIYINNLNEKIK+DELKKSL AVF+QFGKILEVLAFKTLKHKGQAWV+FED SSA+ AL+
Sbjct: 15 TIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNALR 74
Query: 300 RMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQAGA 479
+MQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRE+RKRHDD+A KKR HD+ AG
Sbjct: 75 QMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDDKA--KKRKDQHDANLAGM 132
Query: 480 GLNSAYSGAYGAVPPLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFFCQYPG 659
GLN AY+GAYGA P + Y GG+KSM+PEAPA PNNILF+QNLP+++TPMMLQM F QYPG
Sbjct: 133 GLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPG 192
Query: 660 FKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 803
FKEVRMVE KPGIAFVEYGDEMQSTVAMQ LQ FKIT QNPMLITYAKK
Sbjct: 193 FKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQCFKITPQNPMLITYAKK 241
>ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Solanum
lycopersicum]
Length = 253
Score = 378 bits (970), Expect = e-102
Identities = 187/234 (79%), Positives = 212/234 (90%), Gaps = 4/234 (1%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N+TIYINNLNEKIKL+ELKKS+ AVFSQFGKILEVLAFKTLKHKGQAWV+F++VSSA+ A
Sbjct: 22 NVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFDEVSSASNA 81
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYAKTKSD++AKADGTFVPRE+RKRH+D+ RKK+D D+ QA
Sbjct: 82 LRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKG-RKKKD-QQDANQA 139
Query: 474 GAGLNSAYSGAYGAVPP---LPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 644
G G N AY+GAYGA PP +PY GG+K+ +PEAPA PN+ILFVQNLPH++TPMMLQM F
Sbjct: 140 GMGRNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQMLF 199
Query: 645 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 803
CQYPGFKEVRMVEAKPGIAF+EYGDEMQSTVAMQ LQGFKIT NPMLITYAKK
Sbjct: 200 CQYPGFKEVRMVEAKPGIAFIEYGDEMQSTVAMQALQGFKITADNPMLITYAKK 253
>ref|XP_006397952.1| hypothetical protein EUTSA_v10001603mg [Eutrema salsugineum]
gi|557099025|gb|ESQ39405.1| hypothetical protein
EUTSA_v10001603mg [Eutrema salsugineum]
Length = 247
Score = 375 bits (964), Expect = e-101
Identities = 182/233 (78%), Positives = 202/233 (86%), Gaps = 3/233 (1%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINNLNEK+KLDELKKSL AVFSQFGKILEVLAFKTLKHKGQAWV+FE SA+ A
Sbjct: 15 NQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFESAESASTA 74
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+ +M GFPFYDKPMRIQ+AKTKSD++AKADGTFVPRE+RKRH+++ +KK++ HHDS Q
Sbjct: 75 IAKMNGFPFYDKPMRIQFAKTKSDVVAKADGTFVPREKRKRHEEKGGKKKKEQHHDSTQM 134
Query: 474 GAGLNSAYSGAYGAVPPL---PYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 644
G +NSAY G YGA PPL PY GG K +LPEAPA PNNILFVQNLPH+TTPM +QM F
Sbjct: 135 GNAMNSAYPGVYGAAPPLSQVPYPGGVKPILPEAPAPPNNILFVQNLPHDTTPMTVQMLF 194
Query: 645 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 803
QY GFKEVRMVEAKPGIAFVE+ DEMQSTVAMQGLQGFKI QNPMLITYAKK
Sbjct: 195 YQYQGFKEVRMVEAKPGIAFVEFADEMQSTVAMQGLQGFKILQNPMLITYAKK 247
>ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis] gi|223537662|gb|EEF39285.1| small nuclear
ribonucleoprotein U)1a,U)2b, putative [Ricinus communis]
Length = 254
Score = 370 bits (951), Expect = e-100
Identities = 182/233 (78%), Positives = 205/233 (87%), Gaps = 3/233 (1%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
NMTIYINNLNEKIKLDELKKSL AVFSQFGKI+E+LAFKTLKHKGQAWV+FEDV SAT A
Sbjct: 24 NMTIYINNLNEKIKLDELKKSLHAVFSQFGKIIEILAFKTLKHKGQAWVVFEDVQSATNA 83
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+++MQ FPFYDKPMRI +AKTKSD+IAKADGTFVPRE+RKRH+++ +RKK HD+ QA
Sbjct: 84 IRQMQSFPFYDKPMRIHFAKTKSDVIAKADGTFVPREKRKRHEEKGKRKKE--QHDANQA 141
Query: 474 GAGLNSAYSGAYGAVPPL---PYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 644
G G+ AY+GAYGA PPL PY GG+KSM+PEAPA PNNILF+QNLP++TT M+LQM F
Sbjct: 142 GIGMAPAYAGAYGATPPLSQIPYPGGAKSMVPEAPAPPNNILFIQNLPNDTTTMVLQMLF 201
Query: 645 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 803
Y GFKEVRMVE+KPGIAFVEY DEMQSTVAMQGLQG KI QNPMLITYAKK
Sbjct: 202 QHYAGFKEVRMVESKPGIAFVEYADEMQSTVAMQGLQGLKIQQNPMLITYAKK 254
>ref|XP_006294873.1| hypothetical protein CARUB_v10023926mg [Capsella rubella]
gi|482563581|gb|EOA27771.1| hypothetical protein
CARUB_v10023926mg [Capsella rubella]
Length = 247
Score = 369 bits (948), Expect = e-100
Identities = 180/233 (77%), Positives = 199/233 (85%), Gaps = 3/233 (1%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINNLNEK+KLDELKKSL AVFSQFGKILEVLAFKTLKHKGQAWV+F++ SA+ A
Sbjct: 15 NQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFDNADSASTA 74
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+ +M FPFYDK MRIQYAKTKSD++AKADGTFVPRE+RKR +++ +KK+D HHDS Q
Sbjct: 75 IAKMNDFPFYDKRMRIQYAKTKSDVVAKADGTFVPREKRKRQEEKGGKKKKDQHHDSTQM 134
Query: 474 GAGLNSAYSGAYGAVPPL---PYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 644
G +NSAY G YG PPL PY GG K +LPEAPA PNNILFVQNLPHETTPM+LQM F
Sbjct: 135 GMAMNSAYPGVYGTAPPLSQVPYPGGVKPILPEAPAPPNNILFVQNLPHETTPMVLQMLF 194
Query: 645 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 803
CQY GFKEVRMVEAKPGIAFVE+ DEMQSTVAMQ LQGFKI QN MLITYAKK
Sbjct: 195 CQYQGFKEVRMVEAKPGIAFVEFADEMQSTVAMQALQGFKIQQNQMLITYAKK 247
>ref|XP_006444378.1| hypothetical protein CICLE_v10021907mg [Citrus clementina]
gi|568852654|ref|XP_006479987.1| PREDICTED: U1 small
nuclear ribonucleoprotein A-like [Citrus sinensis]
gi|557546640|gb|ESR57618.1| hypothetical protein
CICLE_v10021907mg [Citrus clementina]
Length = 245
Score = 368 bits (945), Expect = 2e-99
Identities = 180/233 (77%), Positives = 205/233 (87%), Gaps = 3/233 (1%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINNLNEK+K+D+LK+SL AVF QFG ILE+LAFKTLKHKGQAW++F+DV+SAT A
Sbjct: 15 NNTIYINNLNEKVKIDQLKQSLHAVFKQFGTILEILAFKTLKHKGQAWLVFKDVASATAA 74
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+++MQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRH+++ KKR HD+ QA
Sbjct: 75 VEKMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHEEKG--KKRKDQHDANQA 132
Query: 474 GAGLNSAYSGAYGAVPPL---PYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 644
G GLN AY+GAYGA PPL PY GG+KS++PEAPA PNNILFVQN+PH+TTPM LQMFF
Sbjct: 133 GMGLNPAYAGAYGATPPLSQIPYPGGAKSVIPEAPAPPNNILFVQNVPHDTTPMALQMFF 192
Query: 645 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 803
Q+PGFKEVRMVEAKPGIAFVEYGDEMQ+TVAMQ LQ KI Q +LITYAKK
Sbjct: 193 SQFPGFKEVRMVEAKPGIAFVEYGDEMQATVAMQSLQSLKIGQQQLLITYAKK 245
>ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata] gi|297326152|gb|EFH56572.1| hypothetical protein
ARALYDRAFT_483938 [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 368 bits (945), Expect = 2e-99
Identities = 180/233 (77%), Positives = 199/233 (85%), Gaps = 3/233 (1%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINNLNEK+K+DELKKSL AVFSQFGKILE+LAFKTLKHKGQAWV+F++ SA+ A
Sbjct: 17 NQTIYINNLNEKVKIDELKKSLNAVFSQFGKILEILAFKTLKHKGQAWVVFDNADSASTA 76
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+ +M FPFYDK MRIQYAKTKSD++AKADGTFVPRE+RKRH+++ +KK+D HHDS Q
Sbjct: 77 IAKMNDFPFYDKNMRIQYAKTKSDVVAKADGTFVPREKRKRHEEKGGKKKKDHHHDSTQM 136
Query: 474 GAGLNSAYSGAYGAVPPL---PYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 644
G NSAY G YGA PPL PY GG K LPEAPA PNNILFVQNLPHETTPM+LQM F
Sbjct: 137 GMATNSAYPGVYGAAPPLSQVPYPGGVKPNLPEAPAPPNNILFVQNLPHETTPMVLQMLF 196
Query: 645 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 803
QY GFKEVRMVEAKPGIAFVE+ DEMQSTVAMQGLQGFKI QN MLITYAKK
Sbjct: 197 YQYQGFKEVRMVEAKPGIAFVEFADEMQSTVAMQGLQGFKIQQNQMLITYAKK 249
>ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]
gi|75319458|sp|Q39244.1|RU1A_ARATH RecName: Full=U1
small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A gi|1050430|emb|CAA90283.1| U1snRNP-specific
protein [Arabidopsis thaliana] gi|2529669|gb|AAC62852.1|
small nuclear ribonucleoprotein U1A [Arabidopsis
thaliana] gi|15450591|gb|AAK96567.1| At2g47580/T30B22.12
[Arabidopsis thaliana] gi|16649011|gb|AAL24357.1| small
nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|20259986|gb|AAM13340.1| small nuclear
ribonucleoprotein U1A [Arabidopsis thaliana]
gi|22655484|gb|AAM98334.1| At2g47580/T30B22.12
[Arabidopsis thaliana] gi|330255767|gb|AEC10861.1|
spliceosomal protein U1A [Arabidopsis thaliana]
Length = 250
Score = 368 bits (944), Expect = 2e-99
Identities = 179/234 (76%), Positives = 200/234 (85%), Gaps = 4/234 (1%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINNLNEK+KLDELKKSL AVFSQFGKILE+LAFKT KHKGQAWV+F++ SA+ A
Sbjct: 17 NQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEILAFKTFKHKGQAWVVFDNTESASTA 76
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDR-AERKKRDPHHDSKQ 470
+ +M FPFYDK MRIQYAKTKSD++AKADGTFVPRE+RKRH+++ +KK+D HHDS Q
Sbjct: 77 IAKMNNFPFYDKEMRIQYAKTKSDVVAKADGTFVPREKRKRHEEKGGGKKKKDQHHDSTQ 136
Query: 471 AGAGLNSAYSGAYGAVPPL---PYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMF 641
G +NSAY G YGA PPL PY GG K +PEAPA PNNILFVQNLPHETTPM+LQM
Sbjct: 137 MGMPMNSAYPGVYGAAPPLSQVPYPGGMKPNMPEAPAPPNNILFVQNLPHETTPMVLQML 196
Query: 642 FCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 803
FCQY GFKEVRM+EAKPGIAFVE+ DEMQSTVAMQGLQGFKI QN MLITYAKK
Sbjct: 197 FCQYQGFKEVRMIEAKPGIAFVEFADEMQSTVAMQGLQGFKIQQNQMLITYAKK 250
>ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 242
Score = 367 bits (942), Expect = 4e-99
Identities = 186/233 (79%), Positives = 206/233 (88%), Gaps = 3/233 (1%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
NMTIYINNLNEKIKL+ELKKSL AVFSQFGKILEVLAFKTLKHKGQAWV+FE+VSSAT A
Sbjct: 14 NMTIYINNLNEKIKLEELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFEEVSSATNA 73
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYAKTKSDIIAK+DG+FVPRE+RKRH+++ +KK HD+ QA
Sbjct: 74 LRQMQGFPFYDKPMRIQYAKTKSDIIAKSDGSFVPREKRKRHEEKGRKKKE--QHDANQA 131
Query: 474 GAGLNSAYSGAYGAV--PPLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFFC 647
G GLN A++GAYGA +PY GG M+PEAPA PN+ILFVQNLPHETTPMMLQM FC
Sbjct: 132 GMGLNPAFAGAYGATAHSQVPYSGG--VMVPEAPAPPNSILFVQNLPHETTPMMLQMLFC 189
Query: 648 QYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 803
QYPGFKEVRMVEAKPGIAFVEY DE+QSTVAMQ LQGFK+ QN MLITYAKK
Sbjct: 190 QYPGFKEVRMVEAKPGIAFVEYSDEVQSTVAMQALQGFKMNPQNSMLITYAKK 242
>ref|XP_002320337.2| SPLICEOSOMAL protein U1A [Populus trichocarpa]
gi|118485733|gb|ABK94716.1| unknown [Populus
trichocarpa] gi|550324046|gb|EEE98652.2| SPLICEOSOMAL
protein U1A [Populus trichocarpa]
Length = 254
Score = 367 bits (941), Expect = 6e-99
Identities = 185/234 (79%), Positives = 202/234 (86%), Gaps = 4/234 (1%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
NMTIYINNLNEKIK+DELK SL AVFSQFGKILE+LAFKTLKHKGQAWVIFEDV SA+ A
Sbjct: 23 NMTIYINNLNEKIKIDELKTSLHAVFSQFGKILEILAFKTLKHKGQAWVIFEDVQSASNA 82
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+++MQ FPFYDKPMRIQYAKTKSDIIAKADGTFVPRE+R+RH+++ ++KK HD+ Q
Sbjct: 83 IRQMQSFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRRRHEEKGKKKK--DQHDANQV 140
Query: 474 GAGLNSAYSGAYGAVPPL---PYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 644
G GL AY GAYG P L PY GG KSM+PEAPA PNNILF+QNLP+ETTPMMLQM F
Sbjct: 141 GVGLTPAYGGAYGTTPSLLQIPYPGGVKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLF 200
Query: 645 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKI-TQNPMLITYAKK 803
QYPGFKEVRMVEAKPGIAFVEYGDEMQST AM GLQGFKI QN MLITYAKK
Sbjct: 201 QQYPGFKEVRMVEAKPGIAFVEYGDEMQSTGAMHGLQGFKILQQNSMLITYAKK 254
>ref|XP_002302719.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 366 bits (939), Expect = 9e-99
Identities = 180/233 (77%), Positives = 201/233 (86%), Gaps = 3/233 (1%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
NMTIYINNLNEKIK+DELKK+L AVFSQFGKILE+LAFKTLKHKGQAWV+FEDV SA+ A
Sbjct: 21 NMTIYINNLNEKIKIDELKKALHAVFSQFGKILEILAFKTLKHKGQAWVVFEDVQSASNA 80
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+++MQ FPFYDKPMRIQYAKTKSDI+AKADGTFVPRE+R+RH+++ ++KK HD+ Q
Sbjct: 81 MRQMQSFPFYDKPMRIQYAKTKSDIVAKADGTFVPREKRRRHEEKGKKKK--DQHDTNQV 138
Query: 474 GAGLNSAYSGAYGAVPPL---PYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 644
G GL AY GAYG PPL PY GG KSM+PEAPA PNNILF+QNLP+ETT MMLQM F
Sbjct: 139 GVGLTPAYGGAYGTTPPLSQIPYLGGVKSMVPEAPAPPNNILFIQNLPNETTTMMLQMLF 198
Query: 645 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 803
QY GFKEVRMVE KPGIAFVEYGDEMQSTVAM LQGFK+ QN MLITYAKK
Sbjct: 199 QQYAGFKEVRMVETKPGIAFVEYGDEMQSTVAMHALQGFKLQQNSMLITYAKK 251