BLASTX nr result
ID: Zingiber23_contig00005768
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00005768
(333 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003548424.2| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_003529895.2| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
gb|EPS66960.1| hypothetical protein M569_07818 [Genlisea aurea] 59 5e-07
ref|XP_006836331.1| hypothetical protein AMTR_s00092p00078040 [A... 59 9e-07
emb|CBI35966.3| unnamed protein product [Vitis vinifera] 58 1e-06
emb|CBI27471.3| unnamed protein product [Vitis vinifera] 58 1e-06
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
gb|ESW07233.1| hypothetical protein PHAVU_010G112400g [Phaseolus... 58 1e-06
ref|XP_002510931.1| pentatricopeptide repeat-containing protein,... 58 1e-06
ref|XP_002885157.1| pentatricopeptide repeat-containing protein ... 57 2e-06
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera] 57 2e-06
gb|EOX98874.1| Tetratricopeptide repeat-like superfamily protein... 57 3e-06
gb|EOY22925.1| Tetratricopeptide repeat-like superfamily protein... 57 3e-06
ref|XP_004292418.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
gb|ESW28957.1| hypothetical protein PHAVU_002G032000g [Phaseolus... 56 4e-06
ref|XP_006853063.1| hypothetical protein AMTR_s00038p00071780 [A... 56 4e-06
ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 56 4e-06
ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
gb|EOY07667.1| Tetratricopeptide repeat-like superfamily protein... 56 6e-06
ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
>ref|XP_003548424.2| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 945
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/66 (39%), Positives = 44/66 (66%)
Frame = -1
Query: 234 RWQDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFASYSSTCN 55
+W+D L L+R+++++S AT T +L+AC L+ + G+ IH VI+ G S +S CN
Sbjct: 246 KWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICN 305
Query: 54 TIMSLY 37
+I+S+Y
Sbjct: 306 SIVSMY 311
>ref|XP_003529895.2| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 945
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/66 (40%), Positives = 43/66 (65%)
Frame = -1
Query: 234 RWQDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFASYSSTCN 55
RW+D L L R+++++S AT T +L+AC L+ + G+ IH VI+ G S +S CN
Sbjct: 246 RWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICN 305
Query: 54 TIMSLY 37
+I+S+Y
Sbjct: 306 SIVSMY 311
>gb|EPS66960.1| hypothetical protein M569_07818 [Genlisea aurea]
Length = 802
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = -1
Query: 261 SEIGCTSLIR---WQDHLFLYRQLK-NSSLPATSATFPPVLKACANLKLFDHGESIHADV 94
S+ G SL+R +++ L LY Q + N + ++ TFP +LKAC +L F +GES+HA V
Sbjct: 23 SDEGIQSLVRNRRYREALKLYSQEQANRNSSSSRYTFPSLLKACTSLLNFRYGESLHASV 82
Query: 93 IKMGFASYSSTCNTIMSLYIKRGAPYCA 10
IK GF S + ++++ +Y+ G+ CA
Sbjct: 83 IKAGFYSDAYVVSSLIRMYVASGSLVCA 110
>ref|XP_006836331.1| hypothetical protein AMTR_s00092p00078040 [Amborella trichopoda]
gi|548838849|gb|ERM99184.1| hypothetical protein
AMTR_s00092p00078040 [Amborella trichopoda]
Length = 716
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/93 (33%), Positives = 54/93 (58%)
Frame = -1
Query: 279 SILRDRSEIGCTSLIRWQDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHA 100
+I+R+ S G + + L LYR++ +S+ FP VLK+C+ + F +GE IH+
Sbjct: 95 TIIRNHSNNGL-----FDEILQLYRRIFVNSMYPDEFAFPFVLKSCSYVLAFQYGEKIHS 149
Query: 99 DVIKMGFASYSSTCNTIMSLYIKRGAPYCALNL 1
D++K+G+ S+ + ++ LY+K G A NL
Sbjct: 150 DIVKLGYESFVFVSSALLHLYLKAGKLVIARNL 182
>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = -1
Query: 228 QDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFASYSSTCNTI 49
Q+ LFLY ++ SS ++ TFP VLKAC+ L GE IH V+++GF S CN++
Sbjct: 75 QNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSL 134
Query: 48 MSLYIK 31
+ +Y K
Sbjct: 135 IDMYCK 140
>emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/68 (38%), Positives = 43/68 (63%)
Frame = -1
Query: 228 QDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFASYSSTCNTI 49
++ L LY + S+P + TFP +LKAC+++ + + IHA +IKMGF S T N++
Sbjct: 100 EEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSL 159
Query: 48 MSLYIKRG 25
+++Y K G
Sbjct: 160 LNVYSKSG 167
>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/68 (38%), Positives = 43/68 (63%)
Frame = -1
Query: 228 QDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFASYSSTCNTI 49
++ L LY + S+P + TFP +LKAC+++ + + IHA +IKMGF S T N++
Sbjct: 100 EEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSL 159
Query: 48 MSLYIKRG 25
+++Y K G
Sbjct: 160 LNVYSKSG 167
>gb|ESW07233.1| hypothetical protein PHAVU_010G112400g [Phaseolus vulgaris]
Length = 946
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/66 (36%), Positives = 43/66 (65%)
Frame = -1
Query: 234 RWQDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFASYSSTCN 55
+W+ L L+R+++++S AT T +L+AC L+ + G+ +H VIK G S +S CN
Sbjct: 248 KWEKALELFRRMQSASAKATDGTMVKLLQACGKLRALNEGKQLHGYVIKFGRVSNTSICN 307
Query: 54 TIMSLY 37
+++S+Y
Sbjct: 308 SVVSMY 313
>ref|XP_002510931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550046|gb|EEF51533.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 461
Score = 57.8 bits (138), Expect = 1e-06
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = -1
Query: 270 RDRSEIGCTSLIR-------WQDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGE 112
RD S SLI ++D + LY Q+ + TFP VLKAC L L GE
Sbjct: 157 RDESAFAWNSLIAGYSELGLYEDAIALYFQMDEEYVEPDEFTFPRVLKACGGLGLIQVGE 216
Query: 111 SIHADVIKMGFASYSSTCNTIMSLYIKRG 25
++H D+I++GFA+ N ++ +Y K G
Sbjct: 217 AVHRDLIRLGFANDRFASNALVDMYAKCG 245
>ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330997|gb|EFH61416.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 655
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/81 (34%), Positives = 41/81 (50%)
Frame = -1
Query: 252 GCTSLIRWQDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFAS 73
GC R ++ L+ Q+K+S + T +L AC+NL HG S H + G+A
Sbjct: 383 GCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAV 442
Query: 72 YSSTCNTIMSLYIKRGAPYCA 10
+S CN +M +Y K G Y A
Sbjct: 443 NTSICNALMDMYTKCGKLYVA 463
>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/68 (38%), Positives = 43/68 (63%)
Frame = -1
Query: 228 QDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFASYSSTCNTI 49
++ L LY + S+P + TFP +LKAC+++ + + IHA +IKMGF S T N++
Sbjct: 100 EEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSL 159
Query: 48 MSLYIKRG 25
+++Y K G
Sbjct: 160 LNVYSKSG 167
>gb|EOX98874.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 742
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = -1
Query: 234 RWQDHLFLYRQLKNSSL-PATSATFPPVLKACANLKLFDHGESIHADVIKMGFASYSSTC 58
+W + Y+++K + P+ + FPP+LKAC NL D G+S+HA +IK G+ S++S
Sbjct: 27 KWLEVFSHYQEMKRYGVHPSDPSVFPPILKACLNLSPTD-GKSVHACLIKQGYQSFASIG 85
Query: 57 NTIMSLYIKRG 25
N+I+ Y+K G
Sbjct: 86 NSIVDFYMKCG 96
>gb|EOY22925.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 773
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = -1
Query: 252 GCTSLIRWQDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFAS 73
G L +++D L +Y Q++ + TFP LKACA + L GE++H DV++ GF +
Sbjct: 417 GYAELGQYEDALAIYFQMEEEGVEPDRYTFPRALKACAGIGLIQIGEAVHRDVVRKGFGN 476
Query: 72 YSSTCNTIMSLYIKRG 25
N ++ +Y K G
Sbjct: 477 DGFVLNALIDMYAKCG 492
>ref|XP_004292418.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Fragaria vesca subsp. vesca]
Length = 750
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = -1
Query: 246 TSLIRWQDHLFLYRQLKNSS---LPATSATFPPVLKACANLKLFDHGESIHADVIKMGFA 76
+S +W + L + Q+ + LP S FPP+LKAC+NL +G+SIH +IK G
Sbjct: 16 SSNAKWAELLCHFHQVNKAGGLQLPHYSI-FPPILKACSNLLSHSYGKSIHGCLIKNGCD 74
Query: 75 SYSSTCNTIMSLYIKRGAPYCALNL 1
SY+S N+ M YIK P AL++
Sbjct: 75 SYTSIGNSTMDFYIKTKDPDSALSV 99
>gb|ESW28957.1| hypothetical protein PHAVU_002G032000g [Phaseolus vulgaris]
Length = 518
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = -1
Query: 219 LFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFASYSSTCNTIMSL 40
L LY Q+ ++S+P S TFP +LKAC+ L F+ +HA +IKMGF S N+++
Sbjct: 93 LLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETMQLHAHIIKMGFGSEVYAANSLLRA 152
Query: 39 YIKRG 25
Y G
Sbjct: 153 YAISG 157
>ref|XP_006853063.1| hypothetical protein AMTR_s00038p00071780 [Amborella trichopoda]
gi|548856702|gb|ERN14530.1| hypothetical protein
AMTR_s00038p00071780 [Amborella trichopoda]
Length = 714
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/78 (33%), Positives = 44/78 (56%)
Frame = -1
Query: 255 IGCTSLIRWQDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFA 76
+G T L RW++ L + +++ + T VL CA L + G+ +HA V + GF+
Sbjct: 365 VGYTQLCRWEEGLDFFSKMRREACEIDHVTLGLVLNICAGLTDLELGKQVHAFVNRHGFS 424
Query: 75 SYSSTCNTIMSLYIKRGA 22
SY TCN+++ +Y K G+
Sbjct: 425 SYLFTCNSLLDMYGKCGS 442
>ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = -1
Query: 255 IGCTSLIRWQDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFA 76
+GC + ++ L L+ ++ N + T+P VLK+ A+ K GES+H+ IK GF
Sbjct: 310 VGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFD 369
Query: 75 SYSSTCNTIMSLYIKRGAPYCALNL 1
+ + N ++ +Y K+G CAL++
Sbjct: 370 ACKTVSNALVDMYAKQGNLSCALDV 394
>ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = -1
Query: 255 IGCTSLIRWQDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFA 76
+GC + ++ L L+ ++ N + T+P VLK+ A+ K GES+H+ IK GF
Sbjct: 310 VGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFD 369
Query: 75 SYSSTCNTIMSLYIKRGAPYCALNL 1
+ + N ++ +Y K+G CAL++
Sbjct: 370 ACKTVSNALVDMYAKQGNLSCALDV 394
>gb|EOY07667.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 516
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/66 (40%), Positives = 36/66 (54%)
Frame = -1
Query: 219 LFLYRQLKNSSLPATSATFPPVLKACANLKLFDHGESIHADVIKMGFASYSSTCNTIMSL 40
L LY +KN +L T +L+AC G S H VI+MGF SYS CN ++S+
Sbjct: 203 LELYNMMKNLTLKPNDFTLTSLLRACTGSGALGQGRSAHCQVIQMGFDSYSYICNALISM 262
Query: 39 YIKRGA 22
Y K G+
Sbjct: 263 YCKCGS 268
>ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Frame = -1
Query: 273 LRDRSEIGCTSLI-------RWQDHLFLYRQLKNSSLPATSATFPPVLKACANLKLFDHG 115
+ +R + T++I R ++ L+R L NS++ TF VL ACA+L D G
Sbjct: 312 MEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLG 371
Query: 114 ESIHADVIKMGFASYSSTCNTIMSLYIKRG 25
+ IHA ++++GF S+SS + ++ +Y K G
Sbjct: 372 KQIHAYMVRVGFDSFSSAASALVHMYSKCG 401