BLASTX nr result
ID: Zingiber23_contig00005676
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00005676
(588 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE63443.1| hypothetical protein OsJ_18256 [Oryza sativa Japo... 88 1e-15
ref|NP_001055326.1| Os05g0365500 [Oryza sativa Japonica Group] g... 88 1e-15
ref|XP_002465660.1| hypothetical protein SORBIDRAFT_01g043290 [S... 87 3e-15
ref|XP_006654311.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-15
gb|EMT03565.1| Pentatricopeptide repeat-containing protein [Aegi... 86 9e-15
ref|XP_004983049.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
gb|EMT09730.1| Pentatricopeptide repeat-containing protein [Aegi... 85 1e-14
ref|XP_003567254.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
dbj|BAJ86663.1| predicted protein [Hordeum vulgare subsp. vulgare] 84 4e-14
gb|AAS80150.1| ACT11D09.4 [Cucumis melo] 79 7e-13
ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containi... 78 2e-12
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi... 78 2e-12
tpg|DAA49887.1| TPA: hypothetical protein ZEAMMB73_769486 [Zea m... 76 6e-12
gb|ACN35979.1| unknown [Zea mays] 76 6e-12
ref|NP_001130642.1| uncharacterized protein LOC100191742 [Zea ma... 76 6e-12
emb|CBI29649.3| unnamed protein product [Vitis vinifera] 74 2e-11
ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera] 74 2e-11
ref|XP_006592648.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
gb|EXB80396.1| hypothetical protein L484_010965 [Morus notabilis] 69 7e-10
>gb|EEE63443.1| hypothetical protein OsJ_18256 [Oryza sativa Japonica Group]
Length = 937
Score = 88.2 bits (217), Expect = 1e-15
Identities = 39/95 (41%), Positives = 62/95 (65%)
Frame = +3
Query: 3 YNMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQML 182
+N MF GL AGR++ A++V+G+M ++ I+PN +++E L+ A+C EG+LD+ REL M
Sbjct: 476 FNRMFEGLTEAGRMDDALKVYGRMPDKEIKPNTTTFETLVNALCKEGDLDKARELVSDMA 535
Query: 183 RDRINATPEFSAFLLDAFGKAGRIQEIEELVGGSP 287
+ + PEF ++D F AGR +EIE+ P
Sbjct: 536 KGGVTPPPEFRDSVIDIFKNAGRQEEIEKAFEEKP 570
>ref|NP_001055326.1| Os05g0365500 [Oryza sativa Japonica Group]
gi|46063434|gb|AAS79737.1| putative pentatricopeptide
(PPR) repeat-containing protein, PF01535 [Oryza sativa
Japonica Group] gi|54287606|gb|AAV31350.1| putative
pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group] gi|54291873|gb|AAV32241.1|
putative pentatricopeptide repeat-containing protein
[Oryza sativa Japonica Group]
gi|113578877|dbj|BAF17240.1| Os05g0365500 [Oryza sativa
Japonica Group]
Length = 911
Score = 88.2 bits (217), Expect = 1e-15
Identities = 39/95 (41%), Positives = 62/95 (65%)
Frame = +3
Query: 3 YNMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQML 182
+N MF GL AGR++ A++V+G+M ++ I+PN +++E L+ A+C EG+LD+ REL M
Sbjct: 476 FNRMFEGLTEAGRMDDALKVYGRMPDKEIKPNTTTFETLVNALCKEGDLDKARELVSDMA 535
Query: 183 RDRINATPEFSAFLLDAFGKAGRIQEIEELVGGSP 287
+ + PEF ++D F AGR +EIE+ P
Sbjct: 536 KGGVTPPPEFRDSVIDIFKNAGRQEEIEKAFEEKP 570
>ref|XP_002465660.1| hypothetical protein SORBIDRAFT_01g043290 [Sorghum bicolor]
gi|241919514|gb|EER92658.1| hypothetical protein
SORBIDRAFT_01g043290 [Sorghum bicolor]
Length = 927
Score = 87.0 bits (214), Expect = 3e-15
Identities = 41/95 (43%), Positives = 63/95 (66%)
Frame = +3
Query: 3 YNMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQML 182
+N MF GL AG+I+ A++V+G+M ++ I+PN ++E+L+ A+C EGNLD+ R+L M
Sbjct: 461 FNRMFEGLTEAGQIDDALKVYGRMPDKEIKPNTITFEILVKALCKEGNLDQARDLVMDMA 520
Query: 183 RDRINATPEFSAFLLDAFGKAGRIQEIEELVGGSP 287
R+ I PEF ++D F KA R +EIE+ P
Sbjct: 521 RNGIVPPPEFRESVVDFFKKADRQEEIEKAFEEKP 555
>ref|XP_006654311.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Oryza brachyantha]
Length = 754
Score = 85.9 bits (211), Expect = 7e-15
Identities = 37/95 (38%), Positives = 63/95 (66%)
Frame = +3
Query: 3 YNMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQML 182
+N MF GL AG+++ A++V+G+M ++ I+PN +++E+LI A+C EGNLD+ R+L +M
Sbjct: 319 FNRMFEGLTEAGQMDDALKVYGRMADKEIKPNTTTFEILINALCKEGNLDQARDLVTEMA 378
Query: 183 RDRINATPEFSAFLLDAFGKAGRIQEIEELVGGSP 287
R + PEF +++ F GR +E+E+ P
Sbjct: 379 RGGVACPPEFRESVINIFKNDGRQEEVEKAFEEKP 413
>gb|EMT03565.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 754
Score = 85.5 bits (210), Expect = 9e-15
Identities = 39/95 (41%), Positives = 61/95 (64%)
Frame = +3
Query: 3 YNMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQML 182
+N MF GL AGR++ A++V+G+M ++ I+PN +++E+L+ A+C EG LDR +L M
Sbjct: 268 FNRMFEGLSQAGRVDDALKVYGRMADKEIKPNTTTFEILVNALCKEGELDRALDLVRDMA 327
Query: 183 RDRINATPEFSAFLLDAFGKAGRIQEIEELVGGSP 287
R + ATPEF + + F A R +EIE+ P
Sbjct: 328 RGGVVATPEFRESVSEIFKNADRHEEIEKAFEEKP 362
>ref|XP_004983049.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Setaria italica]
Length = 921
Score = 85.1 bits (209), Expect = 1e-14
Identities = 38/95 (40%), Positives = 62/95 (65%)
Frame = +3
Query: 3 YNMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQML 182
+N+MF GL AGRI+ A++V+G+M ++ I+PN +++E+L+ A+C G+LDR R+L M
Sbjct: 463 FNLMFKGLTEAGRIDDALKVYGRMPDKEIKPNTTTFEILVKALCKAGDLDRARDLVMDMA 522
Query: 183 RDRINATPEFSAFLLDAFGKAGRIQEIEELVGGSP 287
R + EF ++D F K+ R +EIE+ P
Sbjct: 523 RGAVEPPQEFRESVIDIFKKSNRQEEIEKAFEEKP 557
>gb|EMT09730.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 1054
Score = 85.1 bits (209), Expect = 1e-14
Identities = 39/95 (41%), Positives = 61/95 (64%)
Frame = +3
Query: 3 YNMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQML 182
+N MF GL AGRI+ A++V+G+M ++ I+P+ +++E+L+ A C EG LDR R+L M
Sbjct: 320 FNRMFQGLTEAGRIDDALKVYGRMPDKEIKPSTATFEILVKASCKEGELDRARDLVRDMA 379
Query: 183 RDRINATPEFSAFLLDAFGKAGRIQEIEELVGGSP 287
R + A PEF +++ F A R +EIE+ P
Sbjct: 380 RGGVVAPPEFRECIVEIFKTADRQEEIEQAFDEKP 414
>ref|XP_003567254.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Brachypodium distachyon]
Length = 761
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/95 (42%), Positives = 60/95 (63%)
Frame = +3
Query: 3 YNMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQML 182
+N MF GL AGRI+ A++V+G+M ++ I+PN +++E+L+ A+C E LDR R+L M
Sbjct: 461 FNRMFEGLTEAGRIDDALKVYGRMPDKEIKPNTTTFEILVKALCKERELDRTRDLVRDMS 520
Query: 183 RDRINATPEFSAFLLDAFGKAGRIQEIEELVGGSP 287
R + A PEF F+ + F A R EIE+ P
Sbjct: 521 RGGVVAPPEFREFVSEIFKNADRHDEIEKAFEEKP 555
>dbj|BAJ86663.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 931
Score = 83.6 bits (205), Expect = 4e-14
Identities = 39/95 (41%), Positives = 60/95 (63%)
Frame = +3
Query: 3 YNMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQML 182
+N MF GL GRI+ A++V+G+M ++ I+PN +++E+L+ A+C EG LDR +L M
Sbjct: 462 FNRMFEGLSQGGRIDDALKVYGRMADKEIKPNTTTFEILVNALCKEGELDRALDLVRDMA 521
Query: 183 RDRINATPEFSAFLLDAFGKAGRIQEIEELVGGSP 287
R + ATPEF + + F A R +EIE+ P
Sbjct: 522 RGGVVATPEFRESVGEIFKNADRHEEIEKAFEEKP 556
>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
Length = 896
Score = 79.3 bits (194), Expect = 7e-13
Identities = 39/90 (43%), Positives = 56/90 (62%)
Frame = +3
Query: 6 NMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQMLR 185
NM+F L+ G+ ++ KM ER +P+ + Y+V+I +CNEG LD REL +Q++R
Sbjct: 473 NMVFGELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDTSRELLDQIMR 532
Query: 186 DRINATPEFSAFLLDAFGKAGRIQEIEELV 275
I TP F+ DAF KAGR +EIE L+
Sbjct: 533 YGIGLTPTLEEFVKDAFVKAGRHEEIERLL 562
>ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 559
Score = 77.8 bits (190), Expect = 2e-12
Identities = 38/90 (42%), Positives = 56/90 (62%)
Frame = +3
Query: 6 NMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQMLR 185
NM+F L+ G+ ++ KM ER +P+ + Y+V+I +CNEG LD REL +Q++R
Sbjct: 281 NMVFGELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMR 340
Query: 186 DRINATPEFSAFLLDAFGKAGRIQEIEELV 275
I TP F+ +AF KAGR +EIE L+
Sbjct: 341 YGIGLTPTLEEFVKEAFVKAGRHEEIERLL 370
>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 871
Score = 77.8 bits (190), Expect = 2e-12
Identities = 38/90 (42%), Positives = 56/90 (62%)
Frame = +3
Query: 6 NMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQMLR 185
NM+F L+ G+ ++ KM ER +P+ + Y+V+I +CNEG LD REL +Q++R
Sbjct: 447 NMVFGELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMR 506
Query: 186 DRINATPEFSAFLLDAFGKAGRIQEIEELV 275
I TP F+ +AF KAGR +EIE L+
Sbjct: 507 YGIGLTPTLEEFVKEAFVKAGRHEEIERLL 536
>tpg|DAA49887.1| TPA: hypothetical protein ZEAMMB73_769486 [Zea mays]
Length = 775
Score = 76.3 bits (186), Expect = 6e-12
Identities = 37/95 (38%), Positives = 60/95 (63%)
Frame = +3
Query: 3 YNMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQML 182
+N MF GL AGRI+ A++V+G+M ++ I+PN +++E+L+ A+C E +LD+ R L M
Sbjct: 423 FNRMFEGLTEAGRIDDALKVYGRMPDKEIKPNMTTFEILVKALCKEEDLDQARGLVMDMA 482
Query: 183 RDRINATPEFSAFLLDAFGKAGRIQEIEELVGGSP 287
R I F +++ F +AGR +EIE+ P
Sbjct: 483 RGGIVPPQGFRESVVNFFKEAGRQEEIEKAFEEKP 517
>gb|ACN35979.1| unknown [Zea mays]
Length = 813
Score = 76.3 bits (186), Expect = 6e-12
Identities = 37/95 (38%), Positives = 60/95 (63%)
Frame = +3
Query: 3 YNMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQML 182
+N MF GL AGRI+ A++V+G+M ++ I+PN +++E+L+ A+C E +LD+ R L M
Sbjct: 461 FNRMFEGLTEAGRIDDALKVYGRMPDKEIKPNMTTFEILVKALCKEEDLDQARGLVMDMA 520
Query: 183 RDRINATPEFSAFLLDAFGKAGRIQEIEELVGGSP 287
R I F +++ F +AGR +EIE+ P
Sbjct: 521 RGGIVPPQGFRESVVNFFKEAGRQEEIEKAFEEKP 555
>ref|NP_001130642.1| uncharacterized protein LOC100191742 [Zea mays]
gi|194689720|gb|ACF78944.1| unknown [Zea mays]
gi|414871331|tpg|DAA49888.1| TPA: hypothetical protein
ZEAMMB73_769486 [Zea mays]
Length = 813
Score = 76.3 bits (186), Expect = 6e-12
Identities = 37/95 (38%), Positives = 60/95 (63%)
Frame = +3
Query: 3 YNMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQML 182
+N MF GL AGRI+ A++V+G+M ++ I+PN +++E+L+ A+C E +LD+ R L M
Sbjct: 461 FNRMFEGLTEAGRIDDALKVYGRMPDKEIKPNMTTFEILVKALCKEEDLDQARGLVMDMA 520
Query: 183 RDRINATPEFSAFLLDAFGKAGRIQEIEELVGGSP 287
R I F +++ F +AGR +EIE+ P
Sbjct: 521 RGGIVPPQGFRESVVNFFKEAGRQEEIEKAFEEKP 555
>emb|CBI29649.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/90 (38%), Positives = 55/90 (61%)
Frame = +3
Query: 6 NMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQMLR 185
N +F LV+ G+ + + V KM E+ +P+ ++YE++I +C E D R+L QM+R
Sbjct: 465 NKVFDELVNKGKAGECVPVLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVR 524
Query: 186 DRINATPEFSAFLLDAFGKAGRIQEIEELV 275
I TP F+++AFGK GR +EIE L+
Sbjct: 525 YNIGVTPSLREFVVEAFGKEGRSEEIERLL 554
>ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Vitis vinifera]
Length = 627
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/90 (38%), Positives = 55/90 (61%)
Frame = +3
Query: 6 NMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQMLR 185
N +F LV+ G+ + + V KM E+ +P+ ++YE++I +C E D R+L QM+R
Sbjct: 465 NKVFDELVNKGKAGECVPVLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVR 524
Query: 186 DRINATPEFSAFLLDAFGKAGRIQEIEELV 275
I TP F+++AFGK GR +EIE L+
Sbjct: 525 YNIGVTPSLREFVVEAFGKEGRSEEIERLL 554
>emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]
Length = 627
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/90 (38%), Positives = 55/90 (61%)
Frame = +3
Query: 6 NMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQMLR 185
N +F LV+ G+ + + V KM E+ +P+ ++YE++I +C E D R+L QM+R
Sbjct: 465 NKVFDELVNKGKAGECVPVLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVR 524
Query: 186 DRINATPEFSAFLLDAFGKAGRIQEIEELV 275
I TP F+++AFGK GR +EIE L+
Sbjct: 525 YNIGVTPSLREFVVEAFGKEGRSEEIERLL 554
>ref|XP_006592648.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Glycine max]
Length = 790
Score = 70.1 bits (170), Expect = 4e-10
Identities = 32/90 (35%), Positives = 53/90 (58%)
Frame = +3
Query: 6 NMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQMLR 185
N +FH L+ G+ ++ KM E+ +P+ + YEV+I +C +G LD+ REL ++++R
Sbjct: 447 NTVFHELIKNGKAIDCAQILSKMGEKDPKPDPTCYEVVIKGLCADGLLDKSRELLDEVMR 506
Query: 186 DRINATPEFSAFLLDAFGKAGRIQEIEELV 275
+ T F+ + F KAGR EIE L+
Sbjct: 507 YGVGVTSSLREFVTEVFKKAGRGDEIERLL 536
>gb|EXB80396.1| hypothetical protein L484_010965 [Morus notabilis]
Length = 836
Score = 69.3 bits (168), Expect = 7e-10
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Frame = +3
Query: 6 NMMFHGLVSAGRINQAMEVFGKMWERGIRPNQSSYEVLITAMCNEGNLDRGRELFEQMLR 185
N +F L+ G+ ++ KM E+ +P+ S YEV+I +CNEG D +L E+++R
Sbjct: 467 NRVFDELIKNGKAVDCAQILKKMGEKDPKPDVSCYEVVIKGLCNEGAFDVSLDLVEEVMR 526
Query: 186 DRINATPEFSAFLLDAFGKAGRIQEIEELV-----GGSPSNVTSQAQQ 314
I TP F+ +AF K GR QEIE ++ G +P + T + Q
Sbjct: 527 YGIGVTPTLQQFVNEAFAKVGRGQEIERVLSMDRWGHTPPSRTERPGQ 574