BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00005431
         (346 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531346.1| structural constituent of ribosome, putative...    95   1e-17
ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro...    92   7e-17
emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]    91   2e-16
ref|XP_006296531.1| hypothetical protein CARUB_v10025723mg [Caps...    88   1e-15
ref|XP_003516947.1| PREDICTED: 30S ribosomal protein S31, chloro...    88   1e-15
ref|XP_006355664.1| PREDICTED: 30S ribosomal protein S31, chloro...    87   2e-15
ref|XP_004302672.1| PREDICTED: 30S ribosomal protein S31, chloro...    87   3e-15
ref|XP_004239932.1| PREDICTED: 30S ribosomal protein S31, chloro...    86   4e-15
ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabid...    86   5e-15
gb|EOY07263.1| Plastid-specific ribosomal protein 4 [Theobroma c...    86   7e-15
gb|ESW05912.1| hypothetical protein PHAVU_010G003200g [Phaseolus...    85   9e-15
gb|EMJ07357.1| hypothetical protein PRUPE_ppa013536mg [Prunus pe...    85   9e-15
ref|XP_006429326.1| hypothetical protein CICLE_v10013049mg [Citr...    85   1e-14
ref|XP_006480988.1| PREDICTED: 30S ribosomal protein S31, chloro...    84   1e-14
gb|AFK38352.1| unknown [Lotus japonicus]                               84   1e-14
gb|ABR17141.1| unknown [Picea sitchensis] gi|224285069|gb|ACN402...    84   3e-14
gb|ABK23830.1| unknown [Picea sitchensis]                              84   3e-14
gb|ABK21808.1| unknown [Picea sitchensis]                              84   3e-14
gb|ESW24913.1| hypothetical protein PHAVU_004G171400g [Phaseolus...    83   3e-14
ref|NP_181349.1| plastid-specific ribosomal protein 4  [Arabidop...    83   3e-14

>ref|XP_002531346.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223529044|gb|EEF31030.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 116

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 52/100 (52%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
 Frame = -2

Query: 297 RLSFSQTETLA-GSSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSF 121
           RLS SQ+E L  G S   S+   +VS T ++  P+P   ++YCGRGDKKTAKGKRF HSF
Sbjct: 16  RLSSSQSEALGVGISFSYSIPSLSVSTTTASTSPIP---FVYCGRGDKKTAKGKRFNHSF 72

Query: 120 GNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           GNARPR+KNKGRG                 DGE+V+I+ID
Sbjct: 73  GNARPRNKNKGRGPPRIPVPSSPPTNDIFEDGEVVKIDID 112


>ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis
           vinifera] gi|297740225|emb|CBI30407.3| unnamed protein
           product [Vitis vinifera]
          Length = 118

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 54/101 (53%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
 Frame = -2

Query: 300 SRLSFSQTETLAGSSSCLSVSPHTVSATLSTALPVPPPL-YIYCGRGDKKTAKGKRFKHS 124
           SR SFSQ+ETLA       VS  T   +LS +   PPP+  +YCGRGDKKTAKGKRF HS
Sbjct: 20  SRFSFSQSETLA-------VSFDTRFVSLSISATSPPPIPSVYCGRGDKKTAKGKRFNHS 72

Query: 123 FGNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           FGNARPR+K KGRG                 D E+V+IEID
Sbjct: 73  FGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEID 113


>emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]
          Length = 117

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 53/100 (53%), Positives = 60/100 (60%)
 Frame = -2

Query: 300 SRLSFSQTETLAGSSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSF 121
           SR SFSQ+ETLA       VS  T   +LS +   PP   +YCGRGDKKTAKGKRF HSF
Sbjct: 20  SRFSFSQSETLA-------VSFDTRFVSLSISATSPPIPSVYCGRGDKKTAKGKRFNHSF 72

Query: 120 GNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           GNARPR+K KGRG                 D E+V+IEID
Sbjct: 73  GNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEID 112


>ref|XP_006296531.1| hypothetical protein CARUB_v10025723mg [Capsella rubella]
           gi|482565239|gb|EOA29429.1| hypothetical protein
           CARUB_v10025723mg [Capsella rubella]
          Length = 118

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 48/100 (48%), Positives = 64/100 (64%)
 Frame = -2

Query: 300 SRLSFSQTETLAGSSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSF 121
           SRLS SQ+ET   S SC +    ++SA+ S+++P+     +YCGRGD+KTAKGKRF HSF
Sbjct: 19  SRLSSSQSETAGVSLSCFT-QQFSLSASSSSSIPL-----VYCGRGDRKTAKGKRFNHSF 72

Query: 120 GNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           GNARPR+KNKGRG                 + E ++I+ID
Sbjct: 73  GNARPRNKNKGRGPERVPVPPAPPRKDKFENDEKIKIDID 112


>ref|XP_003516947.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Glycine
           max]
          Length = 121

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 51/98 (52%), Positives = 62/98 (63%)
 Frame = -2

Query: 294 LSFSQTETLAGSSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSFGN 115
           LSFS ++TL   SS LS S  ++SA+ +T L   P   +YCGRGD+KTAKGKRF HSFGN
Sbjct: 23  LSFSHSQTL---SSPLSTSFPSLSASATTTLSPTPS--VYCGRGDRKTAKGKRFAHSFGN 77

Query: 114 ARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           ARP+DK KGRG                 D E+V+IEID
Sbjct: 78  ARPKDKKKGRGPLRPYAPPAPSKKDRLEDNEVVKIEID 115


>ref|XP_006355664.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Solanum
           tuberosum]
          Length = 121

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 49/97 (50%), Positives = 60/97 (61%)
 Frame = -2

Query: 294 LSFSQTETLAGSSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSFGN 115
           LSFS++ ++AGS S  + SP    ++LS      P   IYCGRGDKKTAKGKRF HSFGN
Sbjct: 24  LSFSRSHSVAGSVSIAAASPSASISSLSLTDSNLP--LIYCGRGDKKTAKGKRFNHSFGN 81

Query: 114 ARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEI 4
           ARPR+K KGRG                 DG++V+IEI
Sbjct: 82  ARPRNKKKGRGPPRVAAPPAAPKRDPFDDGQVVKIEI 118


>ref|XP_004302672.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 117

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 49/100 (49%), Positives = 61/100 (61%)
 Frame = -2

Query: 300 SRLSFSQTETLAGSSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSF 121
           SR+SFSQ+ETLA     +S+   T S ++STA     P  +YCGRGDKKT +GKRF HSF
Sbjct: 20  SRISFSQSETLA-----ISLPSPTASLSISTATTPSVPS-VYCGRGDKKTERGKRFNHSF 73

Query: 120 GNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           GNARPR+K KGRG                 D  +V++EID
Sbjct: 74  GNARPRNKKKGRGSPRVPVPAAPPKKDKFEDDSVVKVEID 113


>ref|XP_004239932.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Solanum
           lycopersicum]
          Length = 121

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 49/97 (50%), Positives = 62/97 (63%)
 Frame = -2

Query: 294 LSFSQTETLAGSSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSFGN 115
           LSFS++ ++AGS S  + SP + S + S+      PL +YCGRGDKKTAKGKRF HSFGN
Sbjct: 24  LSFSRSHSVAGSVSITAASP-SPSISFSSLTDSNLPL-VYCGRGDKKTAKGKRFNHSFGN 81

Query: 114 ARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEI 4
           ARPR+K KGRG                 DG++V+IEI
Sbjct: 82  ARPRNKKKGRGPPRVAAPPAAPKRDPFDDGQVVKIEI 118


>ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabidopsis lyrata subsp.
           lyrata] gi|297325568|gb|EFH55988.1| plastid-specific
           ribosomal protein 4 [Arabidopsis lyrata subsp. lyrata]
          Length = 114

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 48/100 (48%), Positives = 60/100 (60%)
 Frame = -2

Query: 300 SRLSFSQTETLAGSSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSF 121
           SRLS S +ET   S SC   S H  S + S++  +P    +YCGRGD+KTAKGKRF HSF
Sbjct: 19  SRLSSSHSETAGVSLSC---STHQFSLSTSSSSSIP---LVYCGRGDRKTAKGKRFNHSF 72

Query: 120 GNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           GNARPR+KNKGRG                 + E ++I+ID
Sbjct: 73  GNARPRNKNKGRGPERVPVPPAPPRKDKFENDEKIKIDID 112


>gb|EOY07263.1| Plastid-specific ribosomal protein 4 [Theobroma cacao]
          Length = 121

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 49/100 (49%), Positives = 62/100 (62%)
 Frame = -2

Query: 300 SRLSFSQTETLAGSSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSF 121
           SR+S S ++TL  S   LSVS  +VS + +++  +P   Y+YCGRGDKKT KGKRF HSF
Sbjct: 22  SRISSSHSQTLGTS---LSVSTSSVSLSTASSPSIP---YVYCGRGDKKTKKGKRFNHSF 75

Query: 120 GNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           GNARPR+K KGRG                 D E ++IEID
Sbjct: 76  GNARPRNKKKGRGPPRVPIPPSPPRKDKFDDDEKIKIEID 115


>gb|ESW05912.1| hypothetical protein PHAVU_010G003200g [Phaseolus vulgaris]
          Length = 121

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 49/100 (49%), Positives = 62/100 (62%)
 Frame = -2

Query: 300 SRLSFSQTETLAGSSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSF 121
           S LSFS ++TL  S   LS    ++SA+ ++ L + P   +YCGRGD+KTAKGKRF HSF
Sbjct: 21  SHLSFSHSQTLFSS---LSTPFPSLSASATSNLSLTPS--VYCGRGDRKTAKGKRFAHSF 75

Query: 120 GNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           GNARP+DK KGRG                 D E+V+IEID
Sbjct: 76  GNARPKDKKKGRGPPRIYAPPAPSKKNRFEDNEVVKIEID 115


>gb|EMJ07357.1| hypothetical protein PRUPE_ppa013536mg [Prunus persica]
          Length = 117

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 48/101 (47%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = -2

Query: 300 SRLSFSQTETLAGSSSCLSVSPHTVSATLSTAL-PVPPPLYIYCGRGDKKTAKGKRFKHS 124
           SR+SFSQ+ET++     +S+   T S ++STA  P+ P   +YCGRGDKKT +GKRF HS
Sbjct: 20  SRISFSQSETVS-----ISLPSSTASLSVSTATTPLVPS--VYCGRGDKKTERGKRFNHS 72

Query: 123 FGNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           +GNARPR+KNKGRG                 D  +V++EID
Sbjct: 73  YGNARPRNKNKGRGPPRVPVPVAPPKKDKFEDDTVVKVEID 113


>ref|XP_006429326.1| hypothetical protein CICLE_v10013049mg [Citrus clementina]
           gi|557531383|gb|ESR42566.1| hypothetical protein
           CICLE_v10013049mg [Citrus clementina]
          Length = 144

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 48/101 (47%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = -2

Query: 300 SRLSFSQTETLAGSSSCLSVSPHTVSATLST-ALPVPPPLYIYCGRGDKKTAKGKRFKHS 124
           SR+S SQ++ L         +P ++S +LS  + P P   Y+YCGRGDKKTAKGKRF HS
Sbjct: 46  SRISSSQSQILG--------TPLSLSCSLSVPSTPSPSIPYVYCGRGDKKTAKGKRFNHS 97

Query: 123 FGNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           FGNARPRDK KGRG                 DGE + I++D
Sbjct: 98  FGNARPRDKKKGRGPPRVTAPPAPPRKDRFDDGEKIHIDLD 138


>ref|XP_006480988.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Citrus
           sinensis]
          Length = 144

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 48/101 (47%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = -2

Query: 300 SRLSFSQTETLAGSSSCLSVSPHTVSATLST-ALPVPPPLYIYCGRGDKKTAKGKRFKHS 124
           SR+S SQ++ L         +P ++S +LS  + P P   Y+YCGRGDKKTAKGKRF HS
Sbjct: 46  SRISSSQSQILG--------TPLSLSCSLSLPSTPSPSIPYVYCGRGDKKTAKGKRFNHS 97

Query: 123 FGNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           FGNARPRDK KGRG                 DGE + I++D
Sbjct: 98  FGNARPRDKKKGRGPPRVTAPPAPPRKDRFDDGEKIHIDLD 138


>gb|AFK38352.1| unknown [Lotus japonicus]
          Length = 121

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 47/100 (47%), Positives = 60/100 (60%)
 Frame = -2

Query: 300 SRLSFSQTETLAGSSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSF 121
           S LSFSQ++T + S  C S +  + SAT S    + P   +YCGRGD+KT +GKRF HSF
Sbjct: 21  SHLSFSQSQTFS-SPLCTSFTSLSTSATSS----ISPTPSVYCGRGDRKTERGKRFNHSF 75

Query: 120 GNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           GNARP+DK KGRG                 D E+V+I+ID
Sbjct: 76  GNARPKDKKKGRGPPRLYAPPAPTKKDKFEDNEVVKIDID 115


>gb|ABR17141.1| unknown [Picea sitchensis] gi|224285069|gb|ACN40262.1| unknown
           [Picea sitchensis] gi|224287004|gb|ACN41203.1| unknown
           [Picea sitchensis]
          Length = 112

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 46/87 (52%), Positives = 50/87 (57%)
 Frame = -2

Query: 261 SSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSFGNARPRDKNKGRG 82
           S   LS S H  + TLS A P      +YCGRGDK+TAKGKRFKHSFGNARPRD  KGRG
Sbjct: 21  SGQPLSGSSHNTTVTLSIASPKQFYPTVYCGRGDKRTAKGKRFKHSFGNARPRDNKKGRG 80

Query: 81  XXXXXXXXXXXXXXXXXDGEIVRIEID 1
                            DGE + IEID
Sbjct: 81  LPITPLPPGAPKKDLFDDGEKIEIEID 107


>gb|ABK23830.1| unknown [Picea sitchensis]
          Length = 112

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 46/87 (52%), Positives = 50/87 (57%)
 Frame = -2

Query: 261 SSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSFGNARPRDKNKGRG 82
           S   LS S H  + TLS A P      +YCGRGDK+TAKGKRFKHSFGNARPRD  KGRG
Sbjct: 21  SGQPLSGSSHNTTVTLSIASPKQFYPTVYCGRGDKRTAKGKRFKHSFGNARPRDNKKGRG 80

Query: 81  XXXXXXXXXXXXXXXXXDGEIVRIEID 1
                            DGE + IEID
Sbjct: 81  LPITPLPPGAPKKDLFDDGEKIEIEID 107


>gb|ABK21808.1| unknown [Picea sitchensis]
          Length = 112

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 46/87 (52%), Positives = 50/87 (57%)
 Frame = -2

Query: 261 SSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSFGNARPRDKNKGRG 82
           S   LS S H  + TLS A P      +YCGRGDK+TAKGKRFKHSFGNARPRD  KGRG
Sbjct: 21  SGQPLSGSSHNTTVTLSIASPKQFYPTVYCGRGDKRTAKGKRFKHSFGNARPRDNKKGRG 80

Query: 81  XXXXXXXXXXXXXXXXXDGEIVRIEID 1
                            DGE + IEID
Sbjct: 81  LPITPLPPGAPKKDLFDDGEKIEIEID 107


>gb|ESW24913.1| hypothetical protein PHAVU_004G171400g [Phaseolus vulgaris]
          Length = 121

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 48/100 (48%), Positives = 58/100 (58%)
 Frame = -2

Query: 300 SRLSFSQTETLAGSSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSF 121
           S LSFS ++TL    S  +  P   ++  ST  P P    +YCGRGD+KTAKGKRF HSF
Sbjct: 21  SYLSFSHSQTLFSPLS--TPFPSLSASATSTLSPTPS---VYCGRGDRKTAKGKRFAHSF 75

Query: 120 GNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           GNARP+DK KGRG                 D E+V+IEID
Sbjct: 76  GNARPKDKKKGRGPPRIYAPPAPSKRDRFEDNEVVKIEID 115


>ref|NP_181349.1| plastid-specific ribosomal protein 4  [Arabidopsis thaliana]
           gi|75275034|sp|O80439.1|RR31_ARATH RecName: Full=30S
           ribosomal protein S31, chloroplastic; AltName:
           Full=Plastid-specific 30S ribosomal protein 4;
           Short=PSRP-4; Flags: Precursor
           gi|7578852|gb|AAF64153.1|AF236826_1 plastid-specific
           ribosomal protein 4 precursor [Arabidopsis thaliana]
           gi|3335362|gb|AAC27163.1| 30S ribosomal protein S31
           [Arabidopsis thaliana] gi|15529182|gb|AAK97685.1|
           At2g38140/F16M14.7 [Arabidopsis thaliana]
           gi|16974357|gb|AAL31104.1| At2g38140/F16M14.7
           [Arabidopsis thaliana] gi|21618289|gb|AAM67339.1| 30S
           ribosomal protein S31 [Arabidopsis thaliana]
           gi|330254400|gb|AEC09494.1| plastid-specific ribosomal
           protein 4 [Arabidopsis thaliana]
          Length = 118

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 46/100 (46%), Positives = 60/100 (60%)
 Frame = -2

Query: 300 SRLSFSQTETLAGSSSCLSVSPHTVSATLSTALPVPPPLYIYCGRGDKKTAKGKRFKHSF 121
           SRLS S +ET   S SC +   H  S + S++  +P    +YCGRGD+KTAKGKRF HSF
Sbjct: 19  SRLSSSHSETAGVSLSCFT---HQFSLSTSSSSSIP---LVYCGRGDRKTAKGKRFNHSF 72

Query: 120 GNARPRDKNKGRGXXXXXXXXXXXXXXXXXDGEIVRIEID 1
           GNARPR+K+KGRG                 + E ++I+ID
Sbjct: 73  GNARPRNKSKGRGPERVPVPPAPPRKDKFENDEKIKIDID 112