BLASTX nr result

ID: Zingiber23_contig00004978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00004978
         (514 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005107982.1| PREDICTED: la-related protein CG11505-like [...    55   7e-06
emb|CAG07571.1| unnamed protein product [Tetraodon nigroviridis]       55   1e-05

>ref|XP_005107982.1| PREDICTED: la-related protein CG11505-like [Aplysia californica]
          Length = 1243

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 44/170 (25%), Positives = 66/170 (38%), Gaps = 23/170 (13%)
 Frame = +3

Query: 12   PRMQHHERPQLHETNHLRHRNRTQSHAELPPQTQMQPPGGRRLSHCHG*PNYEHH----- 176
            P+ QHH++P + +T    +   T     +PPQT   PP G   SH    P++ HH     
Sbjct: 675  PQQQHHQQPLMVQTGLGGNTTGT-----VPPQTNNPPPMGHHQSHH---PHHHHHQPPPP 726

Query: 177  --------------HHDAYALPLAPSDKLRRPRDGLPSA--RPLLNHRDHHAQRKNRHQV 308
                          HH  +  P  P    ++ +   P A   P  +H  HH      HQ 
Sbjct: 727  LPHHHHQQQQQQQQHHSHHHHPPPPHHHQQQQQPSQPGAPHHPHPHHHHHHQPPPPHHQ- 785

Query: 309  HPPCRRRDTQRCGQREPPHRPVGEVVD--CHHRHRRDEDVPEVQHQDEEL 452
            H    +  TQ+   + PPH P  +      HH H +   +P   H + +L
Sbjct: 786  HVSVNQHHTQQPPPQPPPHHPHQQTGQGAGHHPHHQHGLMPPHHHHNHQL 835


>emb|CAG07571.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2144

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 50/187 (26%), Positives = 68/187 (36%), Gaps = 27/187 (14%)
 Frame = +3

Query: 12   PRMQHHERPQLHETNHLRHRNRTQSHAELPPQTQMQ----PPGGRRLSHCHG*PNYEHHH 179
            P  QH   PQ     H  H     SH+++PP TQM+    P     +      P  +  H
Sbjct: 557  PYSQHSLAPQ-----HSSHNQHVSSHSQIPPHTQMELQKKPQDRAEIPFPRKTPEVQQQH 611

Query: 180  HDAYA---LPLAPSDKLRRPRDGLPSA------RPLLNHRDHHAQRKNR----------- 299
              A A   L  +P+D+ R+P   L S         L  H  HH    +R           
Sbjct: 612  SQAQAAVSLMDSPTDQSRQPPHLLQSVLSHTTRNKLEPHPQHHKMDSHRPHQQHHKMDSH 671

Query: 300  --HQVHPPCRRRDTQRCGQR-EPPHRPVGEVVDCHHRHRRDEDVPEVQHQDEELSQEGAG 470
              HQ HP        +  Q+ EP   P    +D H +H +   +     Q   LSQ+ A 
Sbjct: 672  QPHQQHPKMDAHSQHQQHQKMEPRQHPQHHKIDSHSQHPQHHKMDSHPQQQHSLSQQQAV 731

Query: 471  KRGLGVA 491
              G G A
Sbjct: 732  MEGAGGA 738


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