BLASTX nr result
ID: Zingiber23_contig00004838
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00004838
(549 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006349873.1| PREDICTED: 50S ribosomal protein L18, chloro... 167 2e-39
ref|XP_004252957.1| PREDICTED: 50S ribosomal protein L18, chloro... 167 2e-39
ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precu... 167 2e-39
ref|XP_006478532.1| PREDICTED: 50S ribosomal protein L18, chloro... 165 6e-39
ref|XP_004297049.1| PREDICTED: 50S ribosomal protein L18, chloro... 165 6e-39
ref|XP_006848386.1| hypothetical protein AMTR_s00013p00209880 [A... 165 8e-39
ref|XP_006306511.1| hypothetical protein CARUB_v10012508mg [Caps... 164 1e-38
gb|EOY31692.1| Ribosomal L18p/L5e family protein isoform 1 [Theo... 164 2e-38
ref|NP_175268.1| 50S ribosomal protein L18/L5e family protein [A... 163 3e-38
ref|XP_002891426.1| ribosomal protein L18 family protein [Arabid... 163 3e-38
ref|XP_006393423.1| hypothetical protein EUTSA_v10011822mg [Eutr... 162 6e-38
gb|EMJ27162.1| hypothetical protein PRUPE_ppa012509mg [Prunus pe... 161 1e-37
ref|XP_006441940.1| hypothetical protein CICLE_v10022561mg [Citr... 160 1e-37
gb|EPS74009.1| hypothetical protein M569_00746, partial [Genlise... 160 2e-37
ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloro... 159 4e-37
ref|XP_002270923.1| PREDICTED: 50S ribosomal protein L18, chloro... 156 3e-36
ref|XP_002270819.1| PREDICTED: 50S ribosomal protein L18, chloro... 156 3e-36
ref|XP_006388235.1| hypothetical protein POPTR_0271s00220g, part... 156 4e-36
ref|XP_002334329.1| predicted protein [Populus trichocarpa] 156 4e-36
ref|XP_002314349.1| predicted protein [Populus trichocarpa] gi|5... 156 4e-36
>ref|XP_006349873.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Solanum
tuberosum]
Length = 162
Score = 167 bits (422), Expect = 2e-39
Identities = 80/92 (86%), Positives = 87/92 (94%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKH+YVQVIDDSKMHTLASASTMQKPISEE DYS+GPT EVAKKVGE IAKACLEK
Sbjct: 71 VFRSNKHIYVQVIDDSKMHTLASASTMQKPISEEFDYSAGPTAEVAKKVGEVIAKACLEK 130
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG IEALA+AAREHGL+F
Sbjct: 131 GITKVAFDRGGYPYHGRIEALADAAREHGLQF 162
>ref|XP_004252957.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Solanum
lycopersicum]
Length = 162
Score = 167 bits (422), Expect = 2e-39
Identities = 80/92 (86%), Positives = 87/92 (94%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKH+YVQVIDDSKMHTLASASTMQKPISEE DYS+GPT EVAKKVGE IAKACLEK
Sbjct: 71 VFRSNKHIYVQVIDDSKMHTLASASTMQKPISEEFDYSAGPTAEVAKKVGEVIAKACLEK 130
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG IEALA+AAREHGL+F
Sbjct: 131 GITKVAFDRGGYPYHGRIEALADAAREHGLQF 162
>ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precursor, putative [Ricinus
communis] gi|223549811|gb|EEF51299.1| 50S ribosomal
protein L18, chloroplast precursor, putative [Ricinus
communis]
Length = 164
Score = 167 bits (422), Expect = 2e-39
Identities = 81/92 (88%), Positives = 88/92 (95%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDDSKMHTLASASTMQKPISEE DYSSGPTLEVAKKVGE IAK+CLEK
Sbjct: 73 VFRSNKHLYVQVIDDSKMHTLASASTMQKPISEEFDYSSGPTLEVAKKVGEVIAKSCLEK 132
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG IEALA+AARE+GL+F
Sbjct: 133 GITKVAFDRGGYPYHGRIEALADAARENGLQF 164
>ref|XP_006478532.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Citrus
sinensis]
Length = 171
Score = 165 bits (418), Expect = 6e-39
Identities = 79/92 (85%), Positives = 88/92 (95%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDD+KMHTLASASTMQKPISEE DYSSGPT+EVAKKVGE IAK+CLEK
Sbjct: 80 VFRSNKHLYVQVIDDTKMHTLASASTMQKPISEELDYSSGPTIEVAKKVGEMIAKSCLEK 139
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG I+ALA+AAREHGL+F
Sbjct: 140 GITKVAFDRGGYPYHGRIQALADAAREHGLQF 171
>ref|XP_004297049.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 159
Score = 165 bits (418), Expect = 6e-39
Identities = 78/92 (84%), Positives = 88/92 (95%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDD+KMHTLASASTMQKPISEE DY+SGPT+EVAKKVGE IAK+CLEK
Sbjct: 68 VFRSNKHLYVQVIDDTKMHTLASASTMQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEK 127
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG +EALANAARE+GL+F
Sbjct: 128 GITKVAFDRGGYPYHGRVEALANAARENGLQF 159
>ref|XP_006848386.1| hypothetical protein AMTR_s00013p00209880 [Amborella trichopoda]
gi|548851692|gb|ERN09967.1| hypothetical protein
AMTR_s00013p00209880 [Amborella trichopoda]
Length = 164
Score = 165 bits (417), Expect = 8e-39
Identities = 77/92 (83%), Positives = 88/92 (95%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKH+YVQVIDDSKMHTLA+ASTMQKP+ +E D+SSGPT+EVAKK+GEAIAKACLEK
Sbjct: 73 VFRSNKHMYVQVIDDSKMHTLAAASTMQKPLRDEIDFSSGPTIEVAKKIGEAIAKACLEK 132
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGGFPYHG +EALA+AAREHGLEF
Sbjct: 133 GITKVAFDRGGFPYHGRVEALADAAREHGLEF 164
>ref|XP_006306511.1| hypothetical protein CARUB_v10012508mg [Capsella rubella]
gi|482575222|gb|EOA39409.1| hypothetical protein
CARUB_v10012508mg [Capsella rubella]
Length = 171
Score = 164 bits (415), Expect = 1e-38
Identities = 79/92 (85%), Positives = 86/92 (93%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDDSKMHTLASAST QKPISEE DY+SGPT+EVAKKVGE IAK+CLEK
Sbjct: 80 VFRSNKHLYVQVIDDSKMHTLASASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEK 139
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG IEALA AAREHGL+F
Sbjct: 140 GITKVAFDRGGYPYHGRIEALAAAAREHGLQF 171
>gb|EOY31692.1| Ribosomal L18p/L5e family protein isoform 1 [Theobroma cacao]
Length = 176
Score = 164 bits (414), Expect = 2e-38
Identities = 77/92 (83%), Positives = 87/92 (94%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDDSKMHTLASASTMQKPI EE DYSSGPT+EVAKK+GE IAK+CLE+
Sbjct: 85 VFRSNKHLYVQVIDDSKMHTLASASTMQKPICEEFDYSSGPTIEVAKKIGECIAKSCLEQ 144
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG IEALA++AREHGL+F
Sbjct: 145 GITKVAFDRGGYPYHGRIEALADSAREHGLQF 176
>ref|NP_175268.1| 50S ribosomal protein L18/L5e family protein [Arabidopsis thaliana]
gi|73621536|sp|Q9SX68.1|RK18_ARATH RecName: Full=50S
ribosomal protein L18, chloroplastic; AltName:
Full=CL18; Flags: Precursor
gi|5733872|gb|AAD49760.1|AC007932_8 Similar to 50S
Ribosomal protein L18 from Thermotoga maritima
gb|AE001798. ESTs gb|AI993387, gb|T75951 and gb|T22182
come from this gene [Arabidopsis thaliana]
gi|12484209|gb|AAG54003.1|AF336922_1 putative ribosomal
protein L18 [Arabidopsis thaliana]
gi|110740956|dbj|BAE98573.1| hypothetical protein
[Arabidopsis thaliana] gi|332194156|gb|AEE32277.1| 50S
ribosomal protein L18/L5e family protein [Arabidopsis
thaliana]
Length = 170
Score = 163 bits (412), Expect = 3e-38
Identities = 78/92 (84%), Positives = 86/92 (93%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDD+KMHTLASAST QKPISEE DY+SGPT+EVAKKVGE IAK+CLEK
Sbjct: 79 VFRSNKHLYVQVIDDTKMHTLASASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEK 138
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG IEALA AAREHGL+F
Sbjct: 139 GITKVAFDRGGYPYHGRIEALAAAAREHGLQF 170
>ref|XP_002891426.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297337268|gb|EFH67685.1| ribosomal protein
L18 family protein [Arabidopsis lyrata subsp. lyrata]
Length = 170
Score = 163 bits (412), Expect = 3e-38
Identities = 78/92 (84%), Positives = 86/92 (93%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDD+KMHTLASAST QKPISEE DY+SGPT+EVAKKVGE IAK+CLEK
Sbjct: 79 VFRSNKHLYVQVIDDTKMHTLASASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEK 138
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG IEALA AAREHGL+F
Sbjct: 139 GITKVAFDRGGYPYHGRIEALAAAAREHGLQF 170
>ref|XP_006393423.1| hypothetical protein EUTSA_v10011822mg [Eutrema salsugineum]
gi|557090001|gb|ESQ30709.1| hypothetical protein
EUTSA_v10011822mg [Eutrema salsugineum]
Length = 173
Score = 162 bits (409), Expect = 6e-38
Identities = 77/92 (83%), Positives = 86/92 (93%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDD+KMHTLASAST QKPISE+ DY+SGPT+EVAKKVGE IAK+CLEK
Sbjct: 82 VFRSNKHLYVQVIDDTKMHTLASASTKQKPISEDFDYTSGPTIEVAKKVGEVIAKSCLEK 141
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG IEALA AAREHGL+F
Sbjct: 142 GITKVAFDRGGYPYHGRIEALAAAAREHGLQF 173
>gb|EMJ27162.1| hypothetical protein PRUPE_ppa012509mg [Prunus persica]
Length = 166
Score = 161 bits (407), Expect = 1e-37
Identities = 73/92 (79%), Positives = 87/92 (94%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKH+Y QVIDD+KMHTLASASTMQKP+S+E DY++GPT+EVAKKVGE IAK+CLEK
Sbjct: 75 VFRSNKHIYAQVIDDTKMHTLASASTMQKPVSDEFDYTAGPTIEVAKKVGEVIAKSCLEK 134
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG +EALA+AAREHGL+F
Sbjct: 135 GITKVAFDRGGYPYHGRVEALADAAREHGLQF 166
>ref|XP_006441940.1| hypothetical protein CICLE_v10022561mg [Citrus clementina]
gi|557544202|gb|ESR55180.1| hypothetical protein
CICLE_v10022561mg [Citrus clementina]
Length = 171
Score = 160 bits (406), Expect = 1e-37
Identities = 76/92 (82%), Positives = 88/92 (95%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDD+KMHTLASASTMQKPIS+E DYSSGPT+EV+KKVGE IAK+CLEK
Sbjct: 80 VFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEK 139
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG I+ALA+AARE+GL+F
Sbjct: 140 GITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
>gb|EPS74009.1| hypothetical protein M569_00746, partial [Genlisea aurea]
Length = 125
Score = 160 bits (404), Expect = 2e-37
Identities = 75/92 (81%), Positives = 86/92 (93%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLY QVIDDSKMHTLASAST+QKP+S+E DYSSGPT+EVAK+VGE IAK+C+EK
Sbjct: 34 VFRSNKHLYAQVIDDSKMHTLASASTVQKPVSDEFDYSSGPTIEVAKRVGEVIAKSCIEK 93
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG IEALA+AARE GLEF
Sbjct: 94 GIRKVAFDRGGYPYHGRIEALADAAREQGLEF 125
>ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
sativus] gi|449498793|ref|XP_004160635.1| PREDICTED: 50S
ribosomal protein L18, chloroplastic-like [Cucumis
sativus]
Length = 170
Score = 159 bits (402), Expect = 4e-37
Identities = 75/92 (81%), Positives = 86/92 (93%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDDSKMHTLA+ STMQK ISE DYS+GPT+EVAKK+GEAIAK+CLEK
Sbjct: 79 VFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKIGEAIAKSCLEK 138
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG +EALA+AAREHGL+F
Sbjct: 139 GITKVAFDRGGYPYHGRVEALADAAREHGLQF 170
>ref|XP_002270923.1| PREDICTED: 50S ribosomal protein L18, chloroplastic isoform 2
[Vitis vinifera]
Length = 131
Score = 156 bits (395), Expect = 3e-36
Identities = 76/92 (82%), Positives = 84/92 (91%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDDSKMHTLASASTMQK ISEE DYSS PT+EVAKKVGE IA ACLEK
Sbjct: 40 VFRSNKHLYVQVIDDSKMHTLASASTMQKSISEELDYSSSPTIEVAKKVGEVIASACLEK 99
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG ++ALA+AARE GL+F
Sbjct: 100 GITKVAFDRGGYPYHGRVKALADAAREKGLQF 131
>ref|XP_002270819.1| PREDICTED: 50S ribosomal protein L18, chloroplastic isoform 1
[Vitis vinifera] gi|189096139|pdb|3BBO|Q Chain Q,
Homology Model For The Spinach Chloroplast 50s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
gi|147854297|emb|CAN83428.1| hypothetical protein
VITISV_034871 [Vitis vinifera]
gi|297736841|emb|CBI26042.3| unnamed protein product
[Vitis vinifera]
Length = 161
Score = 156 bits (395), Expect = 3e-36
Identities = 76/92 (82%), Positives = 84/92 (91%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDDSKMHTLASASTMQK ISEE DYSS PT+EVAKKVGE IA ACLEK
Sbjct: 70 VFRSNKHLYVQVIDDSKMHTLASASTMQKSISEELDYSSSPTIEVAKKVGEVIASACLEK 129
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG ++ALA+AARE GL+F
Sbjct: 130 GITKVAFDRGGYPYHGRVKALADAAREKGLQF 161
>ref|XP_006388235.1| hypothetical protein POPTR_0271s00220g, partial [Populus
trichocarpa] gi|550309794|gb|ERP47149.1| hypothetical
protein POPTR_0271s00220g, partial [Populus trichocarpa]
Length = 195
Score = 156 bits (394), Expect = 4e-36
Identities = 72/92 (78%), Positives = 86/92 (93%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDD+KMHTLASASTMQKP +++ DYSSGPT++VAKKVGE IAK+CLEK
Sbjct: 104 VFRSNKHLYVQVIDDTKMHTLASASTMQKPFAQDFDYSSGPTIDVAKKVGEVIAKSCLEK 163
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG + ALA+AARE+GL+F
Sbjct: 164 GITKVAFDRGGYPYHGRVAALADAARENGLQF 195
>ref|XP_002334329.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 156 bits (394), Expect = 4e-36
Identities = 72/92 (78%), Positives = 86/92 (93%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDD+KMHTLASASTMQKP +++ DYSSGPT++VAKKVGE IAK+CLEK
Sbjct: 74 VFRSNKHLYVQVIDDTKMHTLASASTMQKPFAQDFDYSSGPTIDVAKKVGEVIAKSCLEK 133
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG + ALA+AARE+GL+F
Sbjct: 134 GITKVAFDRGGYPYHGRVAALADAARENGLQF 165
>ref|XP_002314349.1| predicted protein [Populus trichocarpa]
gi|566257383|ref|XP_006388561.1| ribosomal protein L18
[Populus trichocarpa] gi|118487426|gb|ABK95541.1|
unknown [Populus trichocarpa]
gi|550310400|gb|ERP47475.1| ribosomal protein L18
[Populus trichocarpa]
Length = 165
Score = 156 bits (394), Expect = 4e-36
Identities = 72/92 (78%), Positives = 86/92 (93%)
Frame = +2
Query: 2 IYRSNKHLYVQVIDDSKMHTLASASTMQKPISEEHDYSSGPTLEVAKKVGEAIAKACLEK 181
++RSNKHLYVQVIDD+KMHTLASASTMQKP +++ DYSSGPT++VAKKVGE IAK+CLEK
Sbjct: 74 VFRSNKHLYVQVIDDTKMHTLASASTMQKPFAQDFDYSSGPTIDVAKKVGEVIAKSCLEK 133
Query: 182 GIAKVAFDRGGFPYHGCIEALANAAREHGLEF 277
GI KVAFDRGG+PYHG + ALA+AARE+GL+F
Sbjct: 134 GITKVAFDRGGYPYHGRVAALADAARENGLQF 165