BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00004684
         (538 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262...   186   3e-45
emb|CBI37628.3| unnamed protein product [Vitis vinifera]              174   1e-41
ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260...   169   4e-40
gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis]     167   1e-39
gb|AAX96488.1| AT5g09850/MYH9_6 [Oryza sativa Japonica Group] gi...   166   3e-39
gb|EEC67739.1| hypothetical protein OsI_35248 [Oryza sativa Indi...   166   3e-39
ref|NP_001065836.1| Os11g0166800 [Oryza sativa Japonica Group] g...   166   3e-39
ref|XP_006664368.1| PREDICTED: probable mediator of RNA polymera...   166   4e-39
gb|ABA95891.2| transcription elongation factor, putative, expres...   165   5e-39
ref|NP_001066244.1| Os12g0165700 [Oryza sativa Japonica Group] g...   165   5e-39
ref|XP_003578864.1| PREDICTED: uncharacterized protein LOC100832...   165   5e-39
gb|EAZ19760.1| hypothetical protein OsJ_35339 [Oryza sativa Japo...   165   5e-39
ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260...   164   1e-38
gb|EOX92591.1| Transcription elongation factor (TFIIS) family pr...   163   3e-38
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm...   162   3e-38
ref|XP_006851404.1| hypothetical protein AMTR_s00040p00061970 [A...   161   1e-37
gb|EOY19919.1| Transcription elongation factor (TFIIS) family pr...   159   3e-37
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...   159   5e-37
ref|XP_006648618.1| PREDICTED: probable mediator of RNA polymera...   158   6e-37
ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citr...   158   6e-37

>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
           gi|296081186|emb|CBI18212.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score =  186 bits (472), Expect = 3e-45
 Identities = 101/182 (55%), Positives = 130/182 (71%), Gaps = 5/182 (2%)
 Frame = +3

Query: 6   LLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTN 185
           LLQ+LADMDITFK LKETDIGRHVN  RKHPSNEVR+LVKQLVRKWKDLVDEW K ++  
Sbjct: 126 LLQSLADMDITFKALKETDIGRHVNRLRKHPSNEVRRLVKQLVRKWKDLVDEWVKLSTPG 185

Query: 186 DTASPAIISNGDSPQQIHGRNSQN-GNQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK 362
           +T + AI+++GDSPQQ H +++ N  +Q+P+F  SPN     +  + G     +E + K+
Sbjct: 186 ETTASAIVADGDSPQQNHLKSTSNVHHQVPDFAYSPNP----HNGSSGSDKNNVELEPKR 241

Query: 363 PA----QNPARYNGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKK 530
            A    + P + N +   P +S +L K +EQ+D+  D EKLA AR+RLHENY EAQNAKK
Sbjct: 242 KAVPRRETPNKPNQTPPIP-TSVALNKQREQKDSLVDEEKLASARRRLHENYQEAQNAKK 300

Query: 531 QR 536
           QR
Sbjct: 301 QR 302


>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  174 bits (441), Expect = 1e-41
 Identities = 98/177 (55%), Positives = 118/177 (66%)
 Frame = +3

Query: 6   LLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTN 185
           LLQ LADMDITFK LKETDIGRHVN  RKHPSN+VR+LVK LVRKWKDLVDEW KSN   
Sbjct: 131 LLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEWVKSNPAG 190

Query: 186 DTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKKP 365
           +  S A+++ GDSP Q   R     +Q+P+FG SPN    G   ++  ++EP E K K  
Sbjct: 191 EFTSSALMAEGDSPPQKIPRTGH--HQVPDFGYSPNPQN-GSSGSDKNNAEP-EPKVKAI 246

Query: 366 AQNPARYNGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQR 536
            +       + + P+SS S     +QRD + D +K A ARKRLHENY EAQNAKKQR
Sbjct: 247 PRKEVPTRPAQSAPVSS-SFPPPNKQRDTAIDPDKFASARKRLHENYQEAQNAKKQR 302


>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
           vinifera]
          Length = 331

 Score =  169 bits (428), Expect = 4e-40
 Identities = 98/177 (55%), Positives = 117/177 (66%)
 Frame = +3

Query: 6   LLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTN 185
           LLQ LADMDITFK LKETDIGRHVN  RKHPSN+VR+LVK LVRKWKDLVDEW KSN   
Sbjct: 131 LLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEWVKSNPAG 190

Query: 186 DTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKKP 365
           +  S A++  GDSP Q   R     +Q+P+FG SPN    G   ++  ++EP E K K  
Sbjct: 191 EFTSSALM-EGDSPPQKIPRTGH--HQVPDFGYSPNPQN-GSSGSDKNNAEP-EPKVKAI 245

Query: 366 AQNPARYNGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQR 536
            +       + + P+SS S     +QRD + D +K A ARKRLHENY EAQNAKKQR
Sbjct: 246 PRKEVPTRPAQSAPVSS-SFPPPNKQRDTAIDPDKFASARKRLHENYQEAQNAKKQR 301


>gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis]
          Length = 418

 Score =  167 bits (423), Expect = 1e-39
 Identities = 97/181 (53%), Positives = 124/181 (68%), Gaps = 4/181 (2%)
 Frame = +3

Query: 6   LLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTN 185
           LLQ+LADMDITF+ LKETDIGRHVN  RKHPS+EV++LVKQ+VRKWKD VDEW K N   
Sbjct: 132 LLQSLADMDITFQALKETDIGRHVNRLRKHPSSEVKRLVKQVVRKWKDTVDEWVKLNQPG 191

Query: 186 DTASPAIISNGDSPQQIHGRNSQNG-NQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK 362
           + AS +++ +GDSPQQ   +  QNG +Q+P+F  SPN +  G   ++  +SEP +     
Sbjct: 192 EHASNSLM-DGDSPQQ---KIPQNGHHQVPDFAYSPNPHN-GSSGSDKNNSEPEQKPKAV 246

Query: 363 PAQN---PARYNGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQ 533
           P++    P   N S  +   S    + +EQR+ S DAEKLA ARKRL ENY EA+NAKKQ
Sbjct: 247 PSRREALPKPMNPSVPQSAHSTPQNRQREQREGSFDAEKLASARKRLQENYKEAENAKKQ 306

Query: 534 R 536
           R
Sbjct: 307 R 307


>gb|AAX96488.1| AT5g09850/MYH9_6 [Oryza sativa Japonica Group]
           gi|77548900|gb|ABA91697.1| transcription elongation
           factor, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 339

 Score =  166 bits (420), Expect = 3e-39
 Identities = 94/186 (50%), Positives = 126/186 (67%), Gaps = 8/186 (4%)
 Frame = +3

Query: 3   SLLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNST 182
           SLLQ+LADMDIT+K L+ETDIGRHVN  RKHPS EVR LVKQL+RKWK++VD+W + +++
Sbjct: 122 SLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLLVKQLIRKWKEIVDDWVRLHNS 181

Query: 183 NDTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK 362
           +  AS +II++G+SP++I G+N Q+ +Q+ EF  SP+ +     ++E  S+      A K
Sbjct: 182 SGDASNSIITDGNSPEKIQGKNQQS-SQVSEFKYSPSPSRHNNSSSERVSNGIASIAATK 240

Query: 363 ------PAQNPARY--NGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQ 518
                 PA + AR   N   +   SSA     KEQ+D+  D E+L  ARKRL ENY EAQ
Sbjct: 241 HRASPAPAHHNARQINNTHHSTTSSSAPARMVKEQKDSHLDLERLDSARKRLQENYQEAQ 300

Query: 519 NAKKQR 536
           NAKKQR
Sbjct: 301 NAKKQR 306


>gb|EEC67739.1| hypothetical protein OsI_35248 [Oryza sativa Indica Group]
          Length = 338

 Score =  166 bits (420), Expect = 3e-39
 Identities = 94/186 (50%), Positives = 126/186 (67%), Gaps = 8/186 (4%)
 Frame = +3

Query: 3   SLLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNST 182
           SLLQ+LADMDIT+K L+ETDIGRHVN  RKHPS EVR LVKQL+RKWK++VD+W + +++
Sbjct: 121 SLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLLVKQLIRKWKEIVDDWVRLHNS 180

Query: 183 NDTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK 362
           +  AS +II++G+SP++I G+N Q+ +Q+ EF  SP+ +     ++E  S+      A K
Sbjct: 181 SGDASNSIITDGNSPEKIQGKNQQS-SQVSEFKYSPSPSRHNNSSSERVSNGIASIAATK 239

Query: 363 ------PAQNPARY--NGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQ 518
                 PA + AR   N   +   SSA     KEQ+D+  D E+L  ARKRL ENY EAQ
Sbjct: 240 HRASPAPAHHNARQINNTHHSTTSSSAPARMVKEQKDSHLDLERLDSARKRLQENYQEAQ 299

Query: 519 NAKKQR 536
           NAKKQR
Sbjct: 300 NAKKQR 305


>ref|NP_001065836.1| Os11g0166800 [Oryza sativa Japonica Group]
           gi|113644540|dbj|BAF27681.1| Os11g0166800, partial
           [Oryza sativa Japonica Group]
          Length = 238

 Score =  166 bits (420), Expect = 3e-39
 Identities = 94/186 (50%), Positives = 126/186 (67%), Gaps = 8/186 (4%)
 Frame = +3

Query: 3   SLLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNST 182
           SLLQ+LADMDIT+K L+ETDIGRHVN  RKHPS EVR LVKQL+RKWK++VD+W + +++
Sbjct: 21  SLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLLVKQLIRKWKEIVDDWVRLHNS 80

Query: 183 NDTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK 362
           +  AS +II++G+SP++I G+N Q+ +Q+ EF  SP+ +     ++E  S+      A K
Sbjct: 81  SGDASNSIITDGNSPEKIQGKNQQS-SQVSEFKYSPSPSRHNNSSSERVSNGIASIAATK 139

Query: 363 ------PAQNPARY--NGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQ 518
                 PA + AR   N   +   SSA     KEQ+D+  D E+L  ARKRL ENY EAQ
Sbjct: 140 HRASPAPAHHNARQINNTHHSTTSSSAPARMVKEQKDSHLDLERLDSARKRLQENYQEAQ 199

Query: 519 NAKKQR 536
           NAKKQR
Sbjct: 200 NAKKQR 205


>ref|XP_006664368.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Oryza brachyantha]
          Length = 278

 Score =  166 bits (419), Expect = 4e-39
 Identities = 94/189 (49%), Positives = 122/189 (64%), Gaps = 11/189 (5%)
 Frame = +3

Query: 3   SLLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNST 182
           SLLQ+LADMDIT+K L+ETDIGRHVN  RKHPS EVRQLVK LVRKWK++VD+W + +++
Sbjct: 61  SLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKLLVRKWKEIVDDWVRLHNS 120

Query: 183 NDTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSS-----EPIE 347
                 +++++GDSP +I GRN QN  Q+ +F  SP+      L++E  S+       IE
Sbjct: 121 GGDGGSSVLTDGDSPDKIQGRNYQNA-QVSDFKYSPSPQRHNGLSSERSSNNNGIESMIE 179

Query: 348 TKAKKPAQNPARYNGSSTRPL------SSASLAKAKEQRDNSPDAEKLAFARKRLHENYL 509
            +   PA  PA +N      +      SSA +   +EQ+D   D EKL  ARKRL ENY 
Sbjct: 180 KRRTSPA--PAYHNNKQNSSISYSTSSSSAPVRTMREQKDTLMDLEKLDSARKRLQENYQ 237

Query: 510 EAQNAKKQR 536
           EAQNAKKQR
Sbjct: 238 EAQNAKKQR 246


>gb|ABA95891.2| transcription elongation factor, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 229

 Score =  165 bits (418), Expect = 5e-39
 Identities = 93/189 (49%), Positives = 122/189 (64%), Gaps = 11/189 (5%)
 Frame = +3

Query: 3   SLLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNST 182
           SLLQ+LADMDIT+K L+ETDIGRHVN  RKHPS EVRQLVK LVRKWK++VD+W + +++
Sbjct: 12  SLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKLLVRKWKEIVDDWVRLHNS 71

Query: 183 NDTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSS-----EPIE 347
                 +++++GDSP +I GR+ QN  Q+ +F  SP+      L++E  S+       IE
Sbjct: 72  GGDGGSSVLTDGDSPDKIQGRSYQNA-QVSDFKYSPSPQRHNGLSSERSSNNNGVESMIE 130

Query: 348 TKAKKPAQNPARYNGSSTRPL------SSASLAKAKEQRDNSPDAEKLAFARKRLHENYL 509
            +   PA  P  +N      +      SSA +   +EQ+DN  D EKL  ARKRL ENY 
Sbjct: 131 KRRTSPA--PTYHNNKQNNSIGYSTTSSSAPVRTVREQKDNLMDLEKLDSARKRLQENYQ 188

Query: 510 EAQNAKKQR 536
           EAQNAKKQR
Sbjct: 189 EAQNAKKQR 197


>ref|NP_001066244.1| Os12g0165700 [Oryza sativa Japonica Group]
           gi|108862239|gb|ABA95889.2| transcription elongation
           factor, putative, expressed [Oryza sativa Japonica
           Group] gi|113648751|dbj|BAF29263.1| Os12g0165700 [Oryza
           sativa Japonica Group] gi|125535897|gb|EAY82385.1|
           hypothetical protein OsI_37597 [Oryza sativa Indica
           Group]
          Length = 340

 Score =  165 bits (418), Expect = 5e-39
 Identities = 93/189 (49%), Positives = 122/189 (64%), Gaps = 11/189 (5%)
 Frame = +3

Query: 3   SLLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNST 182
           SLLQ+LADMDIT+K L+ETDIGRHVN  RKHPS EVRQLVK LVRKWK++VD+W + +++
Sbjct: 123 SLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKLLVRKWKEIVDDWVRLHNS 182

Query: 183 NDTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSS-----EPIE 347
                 +++++GDSP +I GR+ QN  Q+ +F  SP+      L++E  S+       IE
Sbjct: 183 GGDGGSSVLTDGDSPDKIQGRSYQNA-QVSDFKYSPSPQRHNGLSSERSSNNNGVESMIE 241

Query: 348 TKAKKPAQNPARYNGSSTRPL------SSASLAKAKEQRDNSPDAEKLAFARKRLHENYL 509
            +   PA  P  +N      +      SSA +   +EQ+DN  D EKL  ARKRL ENY 
Sbjct: 242 KRRTSPA--PTYHNNKQNNSIGYSTTSSSAPVRTVREQKDNLMDLEKLDSARKRLQENYQ 299

Query: 510 EAQNAKKQR 536
           EAQNAKKQR
Sbjct: 300 EAQNAKKQR 308


>ref|XP_003578864.1| PREDICTED: uncharacterized protein LOC100832597 [Brachypodium
           distachyon]
          Length = 342

 Score =  165 bits (418), Expect = 5e-39
 Identities = 92/186 (49%), Positives = 125/186 (67%), Gaps = 8/186 (4%)
 Frame = +3

Query: 3   SLLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNST 182
           SLLQNLADMDIT+K L++TDIGRHVN+ RKHPS EVRQLVK LVRKWK++VD W + +++
Sbjct: 125 SLLQNLADMDITYKALQDTDIGRHVNSLRKHPSGEVRQLVKLLVRKWKEIVDGWVRLHNS 184

Query: 183 NDTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYS-SEPIETKAK 359
                 +I+++GDSP++  G++ QN  Q+ +F  SP+      L+++  S +   ET  +
Sbjct: 185 GGDGGSSILTDGDSPEKTQGKSYQNA-QVSDFKYSPSPQRHNGLSSDRSSNNNGFETTME 243

Query: 360 K------PAQNPARYNGSST-RPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQ 518
           +      P+ N  + N S+     SSA     +EQ+DN+ D EKL  ARKRLHENY EAQ
Sbjct: 244 RHRASPAPSYNQTKQNSSNNYSTTSSAPPRTMREQKDNNLDLEKLDSARKRLHENYQEAQ 303

Query: 519 NAKKQR 536
           NAKKQR
Sbjct: 304 NAKKQR 309


>gb|EAZ19760.1| hypothetical protein OsJ_35339 [Oryza sativa Japonica Group]
          Length = 241

 Score =  165 bits (418), Expect = 5e-39
 Identities = 93/189 (49%), Positives = 122/189 (64%), Gaps = 11/189 (5%)
 Frame = +3

Query: 3   SLLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNST 182
           SLLQ+LADMDIT+K L+ETDIGRHVN  RKHPS EVRQLVK LVRKWK++VD+W + +++
Sbjct: 24  SLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKLLVRKWKEIVDDWVRLHNS 83

Query: 183 NDTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSS-----EPIE 347
                 +++++GDSP +I GR+ QN  Q+ +F  SP+      L++E  S+       IE
Sbjct: 84  GGDGGSSVLTDGDSPDKIQGRSYQNA-QVSDFKYSPSPQRHNGLSSERSSNNNGVESMIE 142

Query: 348 TKAKKPAQNPARYNGSSTRPL------SSASLAKAKEQRDNSPDAEKLAFARKRLHENYL 509
            +   PA  P  +N      +      SSA +   +EQ+DN  D EKL  ARKRL ENY 
Sbjct: 143 KRRTSPA--PTYHNNKQNNSIGYSTTSSSAPVRTVREQKDNLMDLEKLDSARKRLQENYQ 200

Query: 510 EAQNAKKQR 536
           EAQNAKKQR
Sbjct: 201 EAQNAKKQR 209


>ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
           vinifera]
          Length = 305

 Score =  164 bits (415), Expect = 1e-38
 Identities = 94/177 (53%), Positives = 109/177 (61%)
 Frame = +3

Query: 6   LLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTN 185
           LLQ LADMDITFK LKETDIGRHVN  RKHPSN+VR+LVK LVRKWKDLVDEW KSN   
Sbjct: 131 LLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEWVKSNPAG 190

Query: 186 DTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKKP 365
           +  S A+++ GDSP Q   R   +  Q+P+FG SPN                        
Sbjct: 191 EFTSSALMAEGDSPPQKIPRTGHH--QVPDFGYSPNPQ---------------------- 226

Query: 366 AQNPARYNGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQR 536
                  NGSS    ++A   + K+QRD + D +K A ARKRLHENY EAQNAKKQR
Sbjct: 227 -------NGSSGSDKNNAE-PEPKKQRDTAIDPDKFASARKRLHENYQEAQNAKKQR 275


>gb|EOX92591.1| Transcription elongation factor (TFIIS) family protein, putative
           isoform 1 [Theobroma cacao] gi|508700696|gb|EOX92592.1|
           Transcription elongation factor (TFIIS) family protein,
           putative isoform 1 [Theobroma cacao]
          Length = 336

 Score =  163 bits (412), Expect = 3e-38
 Identities = 93/180 (51%), Positives = 127/180 (70%), Gaps = 3/180 (1%)
 Frame = +3

Query: 6   LLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTN 185
           LLQ+LADMDITF+ LKETDIGRHVN  RKH SN+VR+LVKQLVRKWK++VDEW + N   
Sbjct: 135 LLQSLADMDITFQALKETDIGRHVNILRKHSSNDVRRLVKQLVRKWKEIVDEWVRLNQPG 194

Query: 186 DTASPAIISNGDSPQQIHGRNSQNG-NQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK 362
           +  S A++++GDSPQ+   +  QNG +Q+P+F  SPN +  G   ++  +SEP     +K
Sbjct: 195 ELESSALMADGDSPQR---KPPQNGYHQVPDFAYSPNPHN-GSSGSDKNNSEP----ERK 246

Query: 363 PAQNPARYNGSSTRPLSSASLA--KAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQR 536
           P   P R N    +P  SA +   + +EQ++++ D+E+LA ARKRL ENY EA+NAK+QR
Sbjct: 247 PKPIPPR-NEPPPKPTYSAPVLQNRQREQKESNFDSERLASARKRLQENYKEAENAKRQR 305


>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
           gi|223530431|gb|EEF32318.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score =  162 bits (411), Expect = 3e-38
 Identities = 91/182 (50%), Positives = 123/182 (67%), Gaps = 5/182 (2%)
 Frame = +3

Query: 6   LLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTN 185
           LLQ+LADMDITFK LKETDIGRHVN  RKH SN+VR+LVKQLVRKWKD+VDEW K N   
Sbjct: 152 LLQSLADMDITFKALKETDIGRHVNQLRKHTSNDVRRLVKQLVRKWKDIVDEWVKLNPPG 211

Query: 186 DTASPAIISNGDSPQQIHGRNSQNG-NQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK 362
             AS  ++++GDSP+Q   +  QNG +Q+P+F  SPN +  G   ++  +SEP       
Sbjct: 212 QHASSGLMADGDSPRQ---KFPQNGHHQVPDFAYSPNPHN-GSSGSDKNNSEPERRPKPV 267

Query: 363 PAQNPARYNGSSTRPLSSAS----LAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKK 530
           P +         + P+S+++      + ++QR+N+ D+++LA ARKRL  NY EA+NAKK
Sbjct: 268 PRKEAPPRPAQQSVPVSASASHIVQRQREQQRENNFDSDRLASARKRLQANYKEAENAKK 327

Query: 531 QR 536
           QR
Sbjct: 328 QR 329


>ref|XP_006851404.1| hypothetical protein AMTR_s00040p00061970 [Amborella trichopoda]
           gi|548855098|gb|ERN12985.1| hypothetical protein
           AMTR_s00040p00061970 [Amborella trichopoda]
          Length = 330

 Score =  161 bits (407), Expect = 1e-37
 Identities = 88/175 (50%), Positives = 117/175 (66%), Gaps = 1/175 (0%)
 Frame = +3

Query: 6   LLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTN 185
           LLQ+L DMD+T K LKETDIGRHVN  RKHPS EVR+LVK L+RKWK+LVDEW   ++  
Sbjct: 158 LLQSLTDMDVTVKALKETDIGRHVNGLRKHPSTEVRRLVKHLIRKWKELVDEWV--STAG 215

Query: 186 DTASPAIISNGDSPQQIH-GRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK 362
           + A+ AI++ G+SPQQ H  R SQNGNQ+ E  +SPN    GY +  G      E  +K 
Sbjct: 216 EGAAAAIVAEGESPQQNHQARASQNGNQVRESKHSPN----GYSSGSGMGPNYSEIGSKG 271

Query: 363 PAQNPARYNGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAK 527
               P R   +   P++  S+  A++Q++N+ D ++LA ARKRLHENY EA+N +
Sbjct: 272 KGITPQREAQTKPNPIAPISI-PAQKQKENAIDLQRLASARKRLHENYQEAENGE 325


>gb|EOY19919.1| Transcription elongation factor (TFIIS) family protein, putative
           isoform 1 [Theobroma cacao]
          Length = 337

 Score =  159 bits (403), Expect = 3e-37
 Identities = 93/181 (51%), Positives = 121/181 (66%), Gaps = 4/181 (2%)
 Frame = +3

Query: 6   LLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTN 185
           LLQ+LADMDITF+ LKETDIGRHVN  RKH SN+VR+LVKQLVRKWK++VDEW + N   
Sbjct: 135 LLQSLADMDITFQALKETDIGRHVNKLRKHSSNDVRRLVKQLVRKWKEIVDEWVRVNQPG 194

Query: 186 DTASPAIISNGDSPQQIHGRNSQNG-NQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK 362
           +  S A++ +GDSPQQ   +  QNG  Q+P+F  SPN +  G    E  +SEP     +K
Sbjct: 195 ELESAALM-DGDSPQQ---KLPQNGRQQVPDFAYSPNPHN-GSFGLEKNNSEP----ERK 245

Query: 363 PAQNPARYNGSSTRPLSSA---SLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQ 533
           P   P        RP  S    ++ + +EQ++++ D+E+LA ARKRL  NY EA+NAKKQ
Sbjct: 246 PKPIPPPRKDPPPRPTHSTPPQNVQRQREQKESNFDSERLASARKRLQANYKEAENAKKQ 305

Query: 534 R 536
           R
Sbjct: 306 R 306


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Cucumis sativus]
           gi|449528150|ref|XP_004171069.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26c-like [Cucumis sativus]
          Length = 345

 Score =  159 bits (401), Expect = 5e-37
 Identities = 91/180 (50%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
 Frame = +3

Query: 6   LLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTN 185
           LLQNLADMDITF+ LKETDIGRHVN  RKHPSN+VR+LVK LVRKWK++VDEW + N   
Sbjct: 139 LLQNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPG 198

Query: 186 DTASPAIISNGDSPQQIHGRNSQNG-NQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK 362
           +  +  ++++GDSPQQ   +  QNG +Q+P+F  SPN +  G   ++  +SEP E K K 
Sbjct: 199 EQTA-TLLADGDSPQQ---KAPQNGYHQVPDFAYSPNPHN-GGSGSDRNNSEP-EPKGKS 252

Query: 363 PAQNPARYNGSSTRPLSSAS--LAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQR 536
             +  A    +   P SS +    + ++Q++ + D++KLA ARKRL ENY EA+NAK+QR
Sbjct: 253 VPRRDALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQR 312


>ref|XP_006648618.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like, partial [Oryza brachyantha]
          Length = 267

 Score =  158 bits (400), Expect = 6e-37
 Identities = 92/187 (49%), Positives = 124/187 (66%), Gaps = 9/187 (4%)
 Frame = +3

Query: 3   SLLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAK-SNS 179
           SLLQ LADMDIT+K L+ETDIGRHVN  RKHPS EVR LVKQL+RKWK++VD+W +  N+
Sbjct: 48  SLLQTLADMDITYKALQETDIGRHVNGLRKHPSGEVRLLVKQLIRKWKEIVDDWVRLHNN 107

Query: 180 TNDTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSS--EPIETK 353
           ++     +II++GDSP++I G+  Q  +Q+ EF  SP+ N     ++E  ++    I   
Sbjct: 108 SSGDGGNSIITDGDSPEKIQGK-CQQSSQVSEFKYSPSPNRHYNSSSERVTNGIASIAAV 166

Query: 354 AKKPAQNPARYNG---SSTRPLSSASLAKA---KEQRDNSPDAEKLAFARKRLHENYLEA 515
             +P+  P  +N    S+T   ++ S A A   KEQ+D+  D E+L  ARKRL ENY EA
Sbjct: 167 KHRPSPVPVHHNARQISNTHHSTTTSSAPARMVKEQKDSPLDLERLDSARKRLQENYQEA 226

Query: 516 QNAKKQR 536
           QNAKKQR
Sbjct: 227 QNAKKQR 233


>ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
           gi|568820070|ref|XP_006464554.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26c-like [Citrus sinensis] gi|557529863|gb|ESR41113.1|
           hypothetical protein CICLE_v10025964mg [Citrus
           clementina]
          Length = 353

 Score =  158 bits (400), Expect = 6e-37
 Identities = 102/188 (54%), Positives = 128/188 (68%), Gaps = 11/188 (5%)
 Frame = +3

Query: 6   LLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTN 185
           LLQ+LADMDITFK LKETDIGRHVN  RKH SN+VR+LVK LVRKWKD+VDEW K N   
Sbjct: 143 LLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPG 202

Query: 186 DTASPAIISNGDSPQQIHGRNSQNGN-QIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK 362
           + AS A++ +GDSPQQ   +  QNGN Q+P+F  SPN +  G   ++  +SEP E K+K+
Sbjct: 203 ELASSAMM-DGDSPQQ---KIPQNGNHQVPDFAYSPNPHN-GSSGSDKNNSEP-ERKSKQ 256

Query: 363 PAQNPARYNGSSTRPLSSASLA---------KAKEQRDNSPDAE-KLAFARKRLHENYLE 512
            A  P R    S+RP  SAS A         + KE R+++ DA+ +LA ARKRL ENY  
Sbjct: 257 -APLP-RKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKR 314

Query: 513 AQNAKKQR 536
            +NAK+QR
Sbjct: 315 EENAKRQR 322