BLASTX nr result

ID: Zingiber23_contig00004612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00004612
         (226 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004976981.1| PREDICTED: uncharacterized protein LOC101783...    69   5e-10
ref|NP_001054025.1| Os04g0637500 [Oryza sativa Japonica Group] g...    62   8e-08
emb|CAE04167.3| OSJNBb0034I13.16 [Oryza sativa Japonica Group]         62   8e-08
ref|XP_003579363.1| PREDICTED: uncharacterized protein LOC100823...    62   1e-07
dbj|BAK03703.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   1e-07

>ref|XP_004976981.1| PREDICTED: uncharacterized protein LOC101783847 [Setaria italica]
          Length = 390

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 33/74 (44%), Positives = 47/74 (63%)
 Frame = -2

Query: 222 IENVVRNMNFLRDECGIPEDRVSLVIKRHPSFIVQNPDALRALVDRADGIGIPRGSGMYL 43
           ++ ++RN++ LR   G+PE R++  ++  PS I+Q+P  LRAL  R D  G+PRGS MY 
Sbjct: 185 VDALLRNLDALRGH-GVPEARLAATVRLKPSLILQSPARLRALAARVDACGVPRGSRMYA 243

Query: 42  WILFVLHGVSKEKF 1
           W L  LH VS   F
Sbjct: 244 WALLALHSVSDAAF 257


>ref|NP_001054025.1| Os04g0637500 [Oryza sativa Japonica Group]
           gi|113565596|dbj|BAF15939.1| Os04g0637500 [Oryza sativa
           Japonica Group] gi|215766095|dbj|BAG98323.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218195672|gb|EEC78099.1| hypothetical protein
           OsI_17598 [Oryza sativa Indica Group]
          Length = 393

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 26/75 (34%), Positives = 45/75 (60%)
 Frame = -2

Query: 225 NIENVVRNMNFLRDECGIPEDRVSLVIKRHPSFIVQNPDALRALVDRADGIGIPRGSGMY 46
           +++ ++RN++ LR   G+ + R++  ++  P+ I Q P   + LV R +  G+P  SGMY
Sbjct: 186 SVDALLRNLSTLRS-LGVQQSRITTTVRMQPTLITQTPARFQKLVGRVEACGVPPSSGMY 244

Query: 45  LWILFVLHGVSKEKF 1
           +W  F LH VS+  F
Sbjct: 245 MWAFFALHNVSEGSF 259


>emb|CAE04167.3| OSJNBb0034I13.16 [Oryza sativa Japonica Group]
          Length = 392

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 26/75 (34%), Positives = 45/75 (60%)
 Frame = -2

Query: 225 NIENVVRNMNFLRDECGIPEDRVSLVIKRHPSFIVQNPDALRALVDRADGIGIPRGSGMY 46
           +++ ++RN++ LR   G+ + R++  ++  P+ I Q P   + LV R +  G+P  SGMY
Sbjct: 186 SVDALLRNLSTLRS-LGVQQSRITTTVRMQPTLITQTPARFQKLVGRVEACGVPPSSGMY 244

Query: 45  LWILFVLHGVSKEKF 1
           +W  F LH VS+  F
Sbjct: 245 MWAFFALHNVSEGSF 259


>ref|XP_003579363.1| PREDICTED: uncharacterized protein LOC100823526 [Brachypodium
           distachyon]
          Length = 384

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = -2

Query: 213 VVRNMNFLRDECGIPEDRVSLVIKRHPSFIVQNPDALRALVDRADG-IGIPRGSGMYLWI 37
           +++NM+ LR   G+P+DRVS V++  P+ I+Q+P    ALV R +   GI   SGMY+W 
Sbjct: 179 LLQNMSTLRG-LGVPQDRVSAVVRTQPTVIMQSPAKFNALVARVEACAGILPSSGMYVWC 237

Query: 36  LFVLHGVSKEKF 1
           LF LH +S   F
Sbjct: 238 LFSLHNISDRSF 249


>dbj|BAK03703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 380

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = -2

Query: 225 NIENVVRNMNFLRDECGIPEDRVSLVIKRHPSFIVQNPDALRALVDRADGI--GIPRGSG 52
           +++ ++RN+  LR   G+P+ R++  ++  P+ I+Q+PD LRALV R +    G+P   G
Sbjct: 175 SVDLLLRNLAALR-RLGVPDGRLTAAVRLRPTLIMQSPDKLRALVGRVEEACGGVPPSPG 233

Query: 51  MYLWILFVLHGVSKEKF 1
           MY W LF LH V    F
Sbjct: 234 MYTWCLFALHNVGDRAF 250


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