BLASTX nr result
ID: Zingiber23_contig00002213
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00002213
(1718 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ18263.1| hypothetical protein PRUPE_ppa001047mg [Prunus pe... 366 1e-98
ref|XP_006652220.1| PREDICTED: zinc finger CCCH domain-containin... 365 4e-98
ref|XP_002447715.1| hypothetical protein SORBIDRAFT_06g014350 [S... 354 6e-95
gb|EXC20328.1| Zinc finger CCCH domain-containing protein 41 [Mo... 351 6e-94
sp|Q0JDM0.2|C3H27_ORYSJ RecName: Full=Zinc finger CCCH domain-co... 349 2e-93
emb|CAH66461.1| H0718E12.5 [Oryza sativa Indica Group] 349 2e-93
ref|NP_001052653.1| Os04g0394300 [Oryza sativa Japonica Group] g... 349 2e-93
emb|CAD40551.1| OSJNBa0072K14.6 [Oryza sativa Japonica Group] 349 2e-93
ref|XP_003567835.1| PREDICTED: zinc finger CCCH domain-containin... 347 1e-92
gb|EOY02483.1| Zinc finger family protein / RNA recognition moti... 345 3e-92
ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containin... 333 1e-88
ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis] ... 333 1e-88
ref|XP_006446567.1| hypothetical protein CICLE_v10014173mg [Citr... 331 7e-88
ref|XP_004975433.1| PREDICTED: zinc finger CCCH domain-containin... 330 1e-87
ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin... 330 2e-87
ref|XP_003554702.1| PREDICTED: zinc finger CCCH domain-containin... 329 3e-87
ref|XP_004252213.1| PREDICTED: zinc finger CCCH domain-containin... 325 4e-86
ref|XP_006341318.1| PREDICTED: zinc finger CCCH domain-containin... 322 2e-85
ref|XP_006470267.1| PREDICTED: zinc finger CCCH domain-containin... 322 4e-85
ref|XP_002300018.2| RNA recognition motif-containing family prot... 321 5e-85
>gb|EMJ18263.1| hypothetical protein PRUPE_ppa001047mg [Prunus persica]
Length = 924
Score = 366 bits (940), Expect = 1e-98
Identities = 247/621 (39%), Positives = 332/621 (53%), Gaps = 49/621 (7%)
Frame = +3
Query: 3 QVVSQGLHTHASLFGTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXIT 182
Q+V QG G G+PSV SAQN+SW AFG + GI N +D I
Sbjct: 158 QMVQQGSIPPNLFAGRGLPSVSSAQNASWNAFGLIPGIPNGAMDTLHSIGLQGTLRPPIH 217
Query: 183 PWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHALG 362
+NMG+P QRCRDF+E+G+CLRGD+CPMEHGVNRIV+EDVQSLSQFNL +S + H LG
Sbjct: 218 SSMNMGIPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVS--SAHLLG 275
Query: 363 IQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLNVVSSSSGFVE-ADVYDPD 539
G K + +D L LN S G++ AD+YDPD
Sbjct: 276 KPTGP-GSLPSVSASSAALMNSKGLHGKTSKSAVNDDGLGLNGPYSGPGYLGGADLYDPD 334
Query: 540 QPLWNNGCQGTSEPTL------------MLSLENNDAPLWNVDSSTHSS----------- 650
QPLWNN TS L +L +N+ P+ +V ++ +S
Sbjct: 335 QPLWNNNGPETSNALLGLQSPRNDETESLLDSADNECPIRSVGTAANSQSTSVSVWGRIG 394
Query: 651 -------VQDQIDHSSRSELGSKTINNAGTTNLLSDEI-----KVVNENSAVKASASVPE 794
V+++ID ++ S ++ G L+S + K + KA S P+
Sbjct: 395 SSKSKLDVKEKIDPTNNSSDCIESETKEGKEALVSIQNPPRQGKRIMAEDGPKAVDSSPK 454
Query: 795 KQFNAEMSKKPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFVQ 974
F+ + + QKA RTL+V+GIPQK N R+ALLSHFQKFG+V+DIYIP NSE+AFVQ
Sbjct: 455 THFDPTRNIRKPSQKALRTLFVNGIPQKSNKREALLSHFQKFGEVIDIYIPLNSERAFVQ 514
Query: 975 FSKREEAEAALKAPDAVMGNRFIKLWWANRDRALKGQXXXXXXXXXXXXIGVGYFPYRSL 1154
FS+REEAEAALKAPDAVMGNRFI+LWWANRD G P
Sbjct: 515 FSRREEAEAALKAPDAVMGNRFIRLWWANRDSIPDDGTGTASNFP-------GLIPPHPT 567
Query: 1155 ATEKEKEDLSSTLPHGSKLATSEVVVSIPVPKSSANTSVITYTGK-----KKLDSLEALK 1319
T K++L S P S + TS+ +P + + VI+ K KKL++LE LK
Sbjct: 568 VTSISKDNLQSAAPKSSIVHTSDAF----LPSADNSKPVISNGPKAPPLQKKLENLEQLK 623
Query: 1320 EELRKKQENLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKTEPSR 1499
EELRKKQE L KR++FR +L+K EKQA K E +E +KR K ++ + K +
Sbjct: 624 EELRKKQEMLDQKRNDFRRKLDKLEKQATGPK-GEADIEQAAKRPKVGITADVGKVANPK 682
Query: 1500 ALNIPEGAQEDINNTQEVRKLVDATASCTAKSNTT--IMGNSSKEQTGHQHLSKLSTCS- 1670
+ N P +E + K V+ SC+ K++TT + ++S +Q + L + T S
Sbjct: 683 SSN-PTPMEELHAEMTDKNKCVENVVSCSPKTSTTMVLQQSTSLKQLSIRPLGSIGTPSP 741
Query: 1671 -----LDNQSTSFRVLPPLPA 1718
LDN+ T+FR+LPPLPA
Sbjct: 742 VNRYKLDNRPTAFRILPPLPA 762
>ref|XP_006652220.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like [Oryza
brachyantha]
Length = 929
Score = 365 bits (936), Expect = 4e-98
Identities = 247/605 (40%), Positives = 325/605 (53%), Gaps = 34/605 (5%)
Frame = +3
Query: 3 QVVSQGLHTHASLF-GTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXI 179
Q+ SQG TH +LF G +P SAQN SWG +GF+ G+ N +LD I
Sbjct: 160 QMASQGPPTHPNLFMGAALPGGGSAQNGSWGPYGFMPGMPNGMLDPIHPLGIQGPIQPAI 219
Query: 180 TPWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHAL 359
+P +++GMP QRCRDF+E+G+CLRGD+CPMEHG+NRIV+ED+QSLSQFNL ++ N L
Sbjct: 220 SPLIDLGMPRQRCRDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVAVPNTQGL 279
Query: 360 GIQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLNVVSSSSGFV-EADVYDP 536
GIQ D K + D LKLN ++S+ V +ADVYDP
Sbjct: 280 GIQ----NEAGAAPVNTSSLGGSKGVPAKDIKSGVTNDVLKLNGTTTSAVSVSDADVYDP 335
Query: 537 DQPLWNNGCQGTSEPTLMLSLENNDAPLWNVDSSTHSSVQDQ------IDHSSRSE---- 686
DQPLWN+ S +ND +WN +SS + +V++Q D S S+
Sbjct: 336 DQPLWNSEHPDAS----CAGFAHNDG-VWNAESSGYEAVREQGNQVFAADSSQNSKSSVW 390
Query: 687 --LGSKTINNAGTTNLLSDEIKVVNENSAVK-----------ASASVPEKQFNAEM---- 815
+ SK T N S N + ASA Q N+ +
Sbjct: 391 GRIASKKQGPGKTANATSTSATGNKRNESYDEMTPSTVHVNPASAKDTNGQSNSRIFGDM 450
Query: 816 --SKKPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFVQFSKRE 989
KASRTLYV+GIP + N +ALLSHFQKFG V+DIYIP NSEKAF+QFSKRE
Sbjct: 451 GRQSNRASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFIQFSKRE 510
Query: 990 EAEAALKAPDAVMGNRFIKLWWANRDRAL-KGQXXXXXXXXXXXXIGVGYFPYRSLATEK 1166
EAEAALKAPDAVMGNRFIKLWWANRDR +G+ P + ++ +
Sbjct: 511 EAEAALKAPDAVMGNRFIKLWWANRDRIPDEGEGRIPAKSSHVTTPLANSVPPQPSSSNR 570
Query: 1167 EKEDLSSTLPHGSKLATSEVVVSIPVPKS-SANTSVITYTGKKKLDSLEALKEELRKKQE 1343
KE+L S P S +++E VPK SAN+ K+ +SLE L EELRKKQE
Sbjct: 571 GKENLQSATPRASSGSSAEASGHGTVPKMLSANSVKSVPPDSKRQESLELL-EELRKKQE 629
Query: 1344 NLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKTEPSRALNIPEGA 1523
LA KRDEFR QLE+ KQ L T ++ K++SN+ T S+++N
Sbjct: 630 ILAQKRDEFRRQLERLAKQKGLA-----TSAKQAEGGGKEVSNDVQSTTDSKSMNTRTEG 684
Query: 1524 QEDINNTQEVRKLVDATASCTAKSNTTIMGNS-SKEQTGHQHLSKLSTCSLDNQSTSFRV 1700
+D+ T + R + +S S T+ ++ + +QT S LDN++TSFR+
Sbjct: 685 HQDVAGTLQKRTSGELASSAHKPSATSAQKSAVAAKQTSPLLAPSQSRFKLDNRTTSFRI 744
Query: 1701 LPPLP 1715
LPPLP
Sbjct: 745 LPPLP 749
>ref|XP_002447715.1| hypothetical protein SORBIDRAFT_06g014350 [Sorghum bicolor]
gi|241938898|gb|EES12043.1| hypothetical protein
SORBIDRAFT_06g014350 [Sorghum bicolor]
Length = 918
Score = 354 bits (909), Expect = 6e-95
Identities = 250/607 (41%), Positives = 324/607 (53%), Gaps = 36/607 (5%)
Frame = +3
Query: 3 QVVSQGLHTHASLF-GTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXI 179
Q+ SQG H SLF GT +PS G +GF+ G+ + ILD +
Sbjct: 166 QMASQGPPAHPSLFMGTALPS---------GPYGFIPGMPHGILDPIHPLGMQGPIQPSV 216
Query: 180 TPWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHAL 359
+P +++GMP QRCRDF+E+G+CLRGD+CPMEHGVNRIV++D+QSLSQFNL +S N L
Sbjct: 217 SPLIDLGMPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVDDMQSLSQFNLPVSVPNAQGL 276
Query: 360 GIQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLNVVSSSSGFVEADVYDPD 539
GIQ D K + D+LK N S+ S +ADVYDPD
Sbjct: 277 GIQ----NEGGASSVNLSSLGGSKSVPVKDVKSGVASDALKPNG-SAVSAVADADVYDPD 331
Query: 540 QPLWNNGCQGTSEPTLMLSLENNDAPLWNVDSSTHSSVQDQIDH---------------- 671
QPLWNN S + D +WN +SS + Q+ +
Sbjct: 332 QPLWNNEHPEAS----CTGFVHKDVGVWNAESSGYEMGQEHSNQVFASDGSQSLKSSVWG 387
Query: 672 ---SSRSELGSKTINNAGTT---NLLSDEIKVVNENSAVKASASVPEKQFNAEM------ 815
S R GS T + T+ N SD ++ VK++A Q N+ +
Sbjct: 388 RIASKRKPGGSNTAKSTSTSITGNQKSDYDEMTLSMGQVKSAAKDTNGQPNSRIYGDVGR 447
Query: 816 SKKPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFVQFSKREEA 995
QKASRTLYVHGIPQ+ N DALLSHFQKFG V+DIYIP NSEKAFVQFS+REEA
Sbjct: 448 QSNRAAQKASRTLYVHGIPQESNRWDALLSHFQKFGQVIDIYIPSNSEKAFVQFSRREEA 507
Query: 996 EAALKAPDAVMGNRFIKLWWANRDRALK-GQXXXXXXXXXXXXIGVGYFPYRSLATEKEK 1172
EAALKAPDAVMGNRFIKLWWANRDR L G+ + FP R K
Sbjct: 508 EAALKAPDAVMGNRFIKLWWANRDRILDVGEGRISGKSSQLPTMLANSFPNR------VK 561
Query: 1173 EDLSSTLPHGSKLATSEVVVS-IPVPK--SSANTSVITYTGKKKLDSLEALKEELRKKQE 1343
E++ ST P S +++E + S P K ++NT + K+ +SLE L EELRKKQE
Sbjct: 562 ENVQSTAPRPSSGSSAEPLSSGTPGSKMLPASNTKPVPPHAPKRQESLELL-EELRKKQE 620
Query: 1344 NLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKTEPSRALNIPEGA 1523
LA KRDEFR QLEK KQ K +++ K+ SN+ ++ +R++ EGA
Sbjct: 621 ILAQKRDEFRRQLEKLAKQ----KGSANSVKHAEAGGKEIASNDASEVTDARSMR-AEGA 675
Query: 1524 QEDINNTQEVRKLVDATASCTAKSNTTIMGNS---SKEQTGHQHLSKLSTCSLDNQSTSF 1694
QE + + ++ ASC+ KS T S +K+ T + LDN++TSF
Sbjct: 676 QEIAGSLE--KRSSGEFASCSQKSAATSTQKSAVVTKQTT--LPAPPQNRFKLDNRTTSF 731
Query: 1695 RVLPPLP 1715
R+LPPLP
Sbjct: 732 RILPPLP 738
>gb|EXC20328.1| Zinc finger CCCH domain-containing protein 41 [Morus notabilis]
Length = 930
Score = 351 bits (900), Expect = 6e-94
Identities = 247/612 (40%), Positives = 321/612 (52%), Gaps = 51/612 (8%)
Frame = +3
Query: 36 SLF-GTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXITPWLNMGMPHQ 212
SLF G G+ ++ +AQN+SW AFG G+ N LD I LN+G+P Q
Sbjct: 166 SLFAGRGLLNISNAQNASWNAFGLTPGLPNGGLDAIHSIGLPGTLRPPIPSSLNIGIPRQ 225
Query: 213 RCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHALGIQAGQRXXXX 392
RCRDF+E+G+CLRGDICPMEHGVNRIVIEDVQSLSQFNL +S + H LG +G
Sbjct: 226 RCRDFEERGFCLRGDICPMEHGVNRIVIEDVQSLSQFNLPVSLPSAHLLGTTSGPGPGSL 285
Query: 393 XXXXXXXXXXXXXXXXXXD-GKLLLPEDSLKLNVVSSSSGFVE-ADVYDPDQPLWNNGCQ 566
K +D L LN S SG V AD+YDPDQPLWNN C
Sbjct: 286 AAISSSSTTSLNNKGLHSKTSKPGFADDGLGLNGSYSGSGCVTGADLYDPDQPLWNNNCP 345
Query: 567 GTSEPTLML---------SLENNDAP-------LWNVDSSTHSSVQDQIDHS-SRSELGS 695
TS L L SL N D N S +SV +I S SR ++
Sbjct: 346 ETSNALLALNPSKIDETESLMNGDPSDNFQLRSSGNAVGSHSTSVWGRIGSSKSRLDVKE 405
Query: 696 KTINNAGTTNLLSDEIK------------------VVNENSAVKASASVPEKQFNAEMSK 821
K+ +++ + ++ K +V E++ K S + Q + +
Sbjct: 406 KSDAAISSSDYIENDSKEDKVASAGIPISSRQGKQIVAEDAGPKPLDSSEKTQVDTMRNN 465
Query: 822 KPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFVQFSKREEAEA 1001
+ QKA RTL+V+GIP K N R+ALLSHFQKFG+V+DIYIP N+E+AFVQFSKREEAEA
Sbjct: 466 RKPSQKALRTLFVNGIPLKSNKREALLSHFQKFGEVIDIYIPMNTERAFVQFSKREEAEA 525
Query: 1002 ALKAPDAVMGNRFIKLWWANRDRALKGQXXXXXXXXXXXXIGVGY-FPYRSLATEKEKED 1178
ALKAPDAVMGNRFI+L+WANRD V P S K++
Sbjct: 526 ALKAPDAVMGNRFIRLYWANRDSIPDDNVSSSGSVCATPHGPVSVSVPTNSSLANSSKDN 585
Query: 1179 LSSTLPHGSKLATSEVVVSIPVPKSSANTSVITYTG-KKKLDSLEALKEELRKKQENLAL 1355
L + P S + T V S+P S T+ +KKL SLE LKEELRKKQE L
Sbjct: 586 LQAAAPKSSTVHTH--VASLPDKPSPVVTNGSKVPPLQKKLGSLEQLKEELRKKQEMLEQ 643
Query: 1356 KRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKTEPSRALNI-PEGAQED 1532
KR++FR +L+K EKQA +K D +T E +KR K ++ + AK R+ + P
Sbjct: 644 KRNDFRRKLDKLEKQATGIKGDSDT-EQVAKRPKVGIAVDVAKASTPRSSDSGPIAISPH 702
Query: 1533 INNTQEVRKLVDATASCTAKSNTTIMGNSSKEQTGHQHLSK----------LSTCSLDNQ 1682
+ + K D S + K+NTT+ S+ T QH + ++ LDN+
Sbjct: 703 ADTMTDKNKSGDKIVSHSPKTNTTV--GLSESMTSKQHPVRPFVAVGSPFLVNRYKLDNR 760
Query: 1683 STSFRVLPPLPA 1718
T+FR+LPPLPA
Sbjct: 761 PTAFRILPPLPA 772
>sp|Q0JDM0.2|C3H27_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 27;
Short=OsC3H27 gi|215767208|dbj|BAG99436.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 903
Score = 349 bits (896), Expect = 2e-93
Identities = 240/603 (39%), Positives = 314/603 (52%), Gaps = 32/603 (5%)
Frame = +3
Query: 3 QVVSQGLHTHASLF-GTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXI 179
Q+ SQG TH SLF G +PS SAQN SWG +GF+ G+ N +LD I
Sbjct: 159 QMASQGPPTHPSLFMGPALPSGGSAQNGSWGPYGFMPGMPNGMLDPIHPLGMQGPIQPAI 218
Query: 180 TPWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHAL 359
+P +++GMP QRCRDF+E+G+CLRGD+CPMEHG+NRIV+ED+QSLSQFNL ++ N L
Sbjct: 219 SPLIDLGMPRQRCRDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGL 278
Query: 360 GIQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLNVVSSSSGFVEADVYDPD 539
GIQ D K + D LKLN ++ + +ADVYDPD
Sbjct: 279 GIQ----NEPGTAPVNTSSLGGSKGVPAKDIKSAVTNDVLKLNGTTALA-VSDADVYDPD 333
Query: 540 QPLWNNGCQGTSEPTLMLSLENNDAPLWNVDSSTHSSVQDQ------IDHSSRSE----- 686
QPLWNN P + D +WN +S + + ++Q D S S+
Sbjct: 334 QPLWNN-----EHPDASAGFAHTDG-VWNAESLGYEAAREQGNQVLAADSSQNSKSSVWG 387
Query: 687 -LGSKTINNAGTTNLLSDEIKVVNENSAVK-----------ASASVPEKQFNAEM----- 815
+ SK + + T N S N + ASA Q N+ +
Sbjct: 388 RIASKKLGHGKTANATSTSATGNKRNESYDEMAPSTVHVNPASAKDSNGQSNSRIFGDVG 447
Query: 816 -SKKPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFVQFSKREE 992
KASRTLYV+GIP + N +ALLSHFQKFG V+DIYIP NSEKAFVQFSKREE
Sbjct: 448 RQSNRASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFVQFSKREE 507
Query: 993 AEAALKAPDAVMGNRFIKLWWANRDRALKGQXXXXXXXXXXXXIGVGYFPYRSLATEKEK 1172
AEAALKAPDAVMGNRFIKLWWANRDR + + ++ + K
Sbjct: 508 AEAALKAPDAVMGNRFIKLWWANRDRIPDEVEGRIPAKSSHMSAALANSVPQPSSSNRGK 567
Query: 1173 EDLSSTLPHGSKLATSEVVVSIPVPKS-SANTSVITYTGKKKLDSLEALKEELRKKQENL 1349
E+L S P S +++E K AN+ K+ +SLE L EELRKKQE L
Sbjct: 568 ENLQSATPRASSGSSAEASGPGTGHKMLPANSVKSLPPDTKRQESLELL-EELRKKQEIL 626
Query: 1350 ALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKTEPSRALNIPEGAQE 1529
A KRDEFR QLEK KQ L ++ E K + SN+ + S+++N
Sbjct: 627 AQKRDEFRRQLEKLAKQKGLANSAKQA-EAGGKEV---ASNDVHRVTDSKSMNTGTEGPR 682
Query: 1530 DINNTQEVRKLVDATASCTAKSNTTIMGNS-SKEQTGHQHLSKLSTCSLDNQSTSFRVLP 1706
D T + R + +S S T+ + + +QT + + LDN++TSFR+LP
Sbjct: 683 DAAGTLQNRTSGELASSSHKSSATSAQKPAVATKQTSPLLVPSQNRFKLDNRTTSFRILP 742
Query: 1707 PLP 1715
PLP
Sbjct: 743 PLP 745
>emb|CAH66461.1| H0718E12.5 [Oryza sativa Indica Group]
Length = 904
Score = 349 bits (896), Expect = 2e-93
Identities = 242/606 (39%), Positives = 318/606 (52%), Gaps = 35/606 (5%)
Frame = +3
Query: 3 QVVSQGLHTHASLF-GTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXI 179
Q+ SQG TH SLF G +PS SAQN SWG +GF+ G+ N +LD I
Sbjct: 159 QMASQGPPTHPSLFMGPALPSGGSAQNGSWGPYGFMPGMPNGMLDPIHPLGMQGPIQPAI 218
Query: 180 TPWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHAL 359
+P +++GMP QRCRDF+E+G+CLRGD+CPMEHG+NRIV+ED+QSLSQFNL ++ N L
Sbjct: 219 SPLIDLGMPRQRCRDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGL 278
Query: 360 GIQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLNVVSSSSGFVEADVYDPD 539
GIQ D K + D LKLN ++ + +ADVYDPD
Sbjct: 279 GIQ----NEPGTAPVNTSSLGGSKGVPAKDIKSAVTNDVLKLNGTTALA-VSDADVYDPD 333
Query: 540 QPLWNNGCQGTSEPTLMLSLENNDAPLWNVDSSTHSSVQDQ------IDHSSRSE----- 686
QPLWNN P + D +WN +S + + ++Q D S S+
Sbjct: 334 QPLWNN-----EHPDASAGFAHTDG-VWNAESLGYEAAREQGNQVLAADSSQNSKSSVWG 387
Query: 687 -LGSKTINNAGTTNLLSDEIKVVNENSAVK-----------ASASVPEKQFNAEM----- 815
+ SK + + T N S N + ASA Q N+ +
Sbjct: 388 RIASKKLGHGKTANATSTSATGNKRNESYDEMAPSTVHVNPASAKDSNGQSNSRIFGDVG 447
Query: 816 -SKKPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFVQFSKREE 992
KASRTLYV+GIP + N +ALLSHFQKFG V+DIYIP NSEKAFVQFSKREE
Sbjct: 448 RQSNRASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFVQFSKREE 507
Query: 993 AEAALKAPDAVMGNRFIKLWWANRDR---ALKGQXXXXXXXXXXXXIGVGYFPYRSLATE 1163
AEAALKAPDAVMGNRFIKLWWANRDR ++G+ P + ++
Sbjct: 508 AEAALKAPDAVMGNRFIKLWWANRDRIPDEVEGRIPAKSSHMSAAL--ANSVPPQPSSSN 565
Query: 1164 KEKEDLSSTLPHGSKLATSEVVVSIPVPKS-SANTSVITYTGKKKLDSLEALKEELRKKQ 1340
+ KE+L S P S +++E K AN+ K+ +SLE L EELRKKQ
Sbjct: 566 RGKENLQSATPRASSGSSAEASGPGTGHKMLPANSVKSLPPDTKRQESLELL-EELRKKQ 624
Query: 1341 ENLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKTEPSRALNIPEG 1520
E LA KRDEFR QLEK KQ L ++ E K + SN+ + S+++N
Sbjct: 625 EILAQKRDEFRRQLEKLAKQKGLANSAKQA-EAGGKEV---ASNDVHRVTDSKSMNTGTE 680
Query: 1521 AQEDINNTQEVRKLVDATASCTAKSNTTIMGNS-SKEQTGHQHLSKLSTCSLDNQSTSFR 1697
D T + R + +S S T+ + + +QT + + LDN++TSFR
Sbjct: 681 GPRDAAGTLQNRTSGELASSSHKSSATSAQKPAVATKQTSPLLVPSQNRFKLDNRTTSFR 740
Query: 1698 VLPPLP 1715
+LPPLP
Sbjct: 741 ILPPLP 746
>ref|NP_001052653.1| Os04g0394300 [Oryza sativa Japonica Group]
gi|113564224|dbj|BAF14567.1| Os04g0394300, partial [Oryza
sativa Japonica Group]
Length = 917
Score = 349 bits (896), Expect = 2e-93
Identities = 240/603 (39%), Positives = 314/603 (52%), Gaps = 32/603 (5%)
Frame = +3
Query: 3 QVVSQGLHTHASLF-GTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXI 179
Q+ SQG TH SLF G +PS SAQN SWG +GF+ G+ N +LD I
Sbjct: 173 QMASQGPPTHPSLFMGPALPSGGSAQNGSWGPYGFMPGMPNGMLDPIHPLGMQGPIQPAI 232
Query: 180 TPWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHAL 359
+P +++GMP QRCRDF+E+G+CLRGD+CPMEHG+NRIV+ED+QSLSQFNL ++ N L
Sbjct: 233 SPLIDLGMPRQRCRDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGL 292
Query: 360 GIQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLNVVSSSSGFVEADVYDPD 539
GIQ D K + D LKLN ++ + +ADVYDPD
Sbjct: 293 GIQ----NEPGTAPVNTSSLGGSKGVPAKDIKSAVTNDVLKLNGTTALA-VSDADVYDPD 347
Query: 540 QPLWNNGCQGTSEPTLMLSLENNDAPLWNVDSSTHSSVQDQ------IDHSSRSE----- 686
QPLWNN P + D +WN +S + + ++Q D S S+
Sbjct: 348 QPLWNN-----EHPDASAGFAHTDG-VWNAESLGYEAAREQGNQVLAADSSQNSKSSVWG 401
Query: 687 -LGSKTINNAGTTNLLSDEIKVVNENSAVK-----------ASASVPEKQFNAEM----- 815
+ SK + + T N S N + ASA Q N+ +
Sbjct: 402 RIASKKLGHGKTANATSTSATGNKRNESYDEMAPSTVHVNPASAKDSNGQSNSRIFGDVG 461
Query: 816 -SKKPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFVQFSKREE 992
KASRTLYV+GIP + N +ALLSHFQKFG V+DIYIP NSEKAFVQFSKREE
Sbjct: 462 RQSNRASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFVQFSKREE 521
Query: 993 AEAALKAPDAVMGNRFIKLWWANRDRALKGQXXXXXXXXXXXXIGVGYFPYRSLATEKEK 1172
AEAALKAPDAVMGNRFIKLWWANRDR + + ++ + K
Sbjct: 522 AEAALKAPDAVMGNRFIKLWWANRDRIPDEVEGRIPAKSSHMSAALANSVPQPSSSNRGK 581
Query: 1173 EDLSSTLPHGSKLATSEVVVSIPVPKS-SANTSVITYTGKKKLDSLEALKEELRKKQENL 1349
E+L S P S +++E K AN+ K+ +SLE L EELRKKQE L
Sbjct: 582 ENLQSATPRASSGSSAEASGPGTGHKMLPANSVKSLPPDTKRQESLELL-EELRKKQEIL 640
Query: 1350 ALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKTEPSRALNIPEGAQE 1529
A KRDEFR QLEK KQ L ++ E K + SN+ + S+++N
Sbjct: 641 AQKRDEFRRQLEKLAKQKGLANSAKQA-EAGGKEV---ASNDVHRVTDSKSMNTGTEGPR 696
Query: 1530 DINNTQEVRKLVDATASCTAKSNTTIMGNS-SKEQTGHQHLSKLSTCSLDNQSTSFRVLP 1706
D T + R + +S S T+ + + +QT + + LDN++TSFR+LP
Sbjct: 697 DAAGTLQNRTSGELASSSHKSSATSAQKPAVATKQTSPLLVPSQNRFKLDNRTTSFRILP 756
Query: 1707 PLP 1715
PLP
Sbjct: 757 PLP 759
>emb|CAD40551.1| OSJNBa0072K14.6 [Oryza sativa Japonica Group]
Length = 915
Score = 349 bits (896), Expect = 2e-93
Identities = 240/603 (39%), Positives = 314/603 (52%), Gaps = 32/603 (5%)
Frame = +3
Query: 3 QVVSQGLHTHASLF-GTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXI 179
Q+ SQG TH SLF G +PS SAQN SWG +GF+ G+ N +LD I
Sbjct: 171 QMASQGPPTHPSLFMGPALPSGGSAQNGSWGPYGFMPGMPNGMLDPIHPLGMQGPIQPAI 230
Query: 180 TPWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHAL 359
+P +++GMP QRCRDF+E+G+CLRGD+CPMEHG+NRIV+ED+QSLSQFNL ++ N L
Sbjct: 231 SPLIDLGMPRQRCRDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGL 290
Query: 360 GIQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLNVVSSSSGFVEADVYDPD 539
GIQ D K + D LKLN ++ + +ADVYDPD
Sbjct: 291 GIQ----NEPGTAPVNTSSLGGSKGVPAKDIKSAVTNDVLKLNGTTALA-VSDADVYDPD 345
Query: 540 QPLWNNGCQGTSEPTLMLSLENNDAPLWNVDSSTHSSVQDQ------IDHSSRSE----- 686
QPLWNN P + D +WN +S + + ++Q D S S+
Sbjct: 346 QPLWNN-----EHPDASAGFAHTDG-VWNAESLGYEAAREQGNQVLAADSSQNSKSSVWG 399
Query: 687 -LGSKTINNAGTTNLLSDEIKVVNENSAVK-----------ASASVPEKQFNAEM----- 815
+ SK + + T N S N + ASA Q N+ +
Sbjct: 400 RIASKKLGHGKTANATSTSATGNKRNESYDEMAPSTVHVNPASAKDSNGQSNSRIFGDVG 459
Query: 816 -SKKPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFVQFSKREE 992
KASRTLYV+GIP + N +ALLSHFQKFG V+DIYIP NSEKAFVQFSKREE
Sbjct: 460 RQSNRASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFVQFSKREE 519
Query: 993 AEAALKAPDAVMGNRFIKLWWANRDRALKGQXXXXXXXXXXXXIGVGYFPYRSLATEKEK 1172
AEAALKAPDAVMGNRFIKLWWANRDR + + ++ + K
Sbjct: 520 AEAALKAPDAVMGNRFIKLWWANRDRIPDEVEGRIPAKSSHMSAALANSVPQPSSSNRGK 579
Query: 1173 EDLSSTLPHGSKLATSEVVVSIPVPKS-SANTSVITYTGKKKLDSLEALKEELRKKQENL 1349
E+L S P S +++E K AN+ K+ +SLE L EELRKKQE L
Sbjct: 580 ENLQSATPRASSGSSAEASGPGTGHKMLPANSVKSLPPDTKRQESLELL-EELRKKQEIL 638
Query: 1350 ALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKTEPSRALNIPEGAQE 1529
A KRDEFR QLEK KQ L ++ E K + SN+ + S+++N
Sbjct: 639 AQKRDEFRRQLEKLAKQKGLANSAKQA-EAGGKEV---ASNDVHRVTDSKSMNTGTEGPR 694
Query: 1530 DINNTQEVRKLVDATASCTAKSNTTIMGNS-SKEQTGHQHLSKLSTCSLDNQSTSFRVLP 1706
D T + R + +S S T+ + + +QT + + LDN++TSFR+LP
Sbjct: 695 DAAGTLQNRTSGELASSSHKSSATSAQKPAVATKQTSPLLVPSQNRFKLDNRTTSFRILP 754
Query: 1707 PLP 1715
PLP
Sbjct: 755 PLP 757
>ref|XP_003567835.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
[Brachypodium distachyon]
Length = 923
Score = 347 bits (889), Expect = 1e-92
Identities = 246/609 (40%), Positives = 321/609 (52%), Gaps = 38/609 (6%)
Frame = +3
Query: 3 QVVSQGLHTHASLFGTG-IPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXI 179
Q+ SQG TH SLF +PS S QN SWG +GF+ G+ +R+LD I
Sbjct: 161 QMASQGPPTHPSLFMRAPLPSSGSGQNGSWGPYGFMPGMPSRMLDPIHPLGMQGPIQPAI 220
Query: 180 TPWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHAL 359
+P +++GMP QRCRDF+E+G+CLRGD+CPMEHGVNRIV+ED+QSLSQFNL +S N L
Sbjct: 221 SPLIDLGMPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDMQSLSQFNLPVSVPNAPGL 280
Query: 360 GIQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLNVVSSSSGFVEADVYDPD 539
GIQ D K + +D+LKLN ++S +ADVYDPD
Sbjct: 281 GIQ----NEAGTAHVNLTNLGGSKGVPAKDIKSGVTDDALKLNG-GTTSAVADADVYDPD 335
Query: 540 QPLWNNGCQGTSEPTLMLSLENNDAPLWNVDSSTH-----------------SSVQDQID 668
QPLWNN S ND +WN ++S+H SSV +I
Sbjct: 336 QPLWNNEQPEASSAGFA---HTNDG-VWNAETSSHEAGWKHANQGFAAENSKSSVWGRIA 391
Query: 669 HSSRSELG--SKTINNAGTTNLLSDEIKVVNENSAVKASASVPEK--QFNAEM------- 815
+S G + TI+ + T N SD + ++ AS + Q N+ +
Sbjct: 392 SKRKSGPGKTANTISTSATENQKSDYYDDMAPSTVQVNPASTKDTNGQSNSRIFGDVGRQ 451
Query: 816 SKKPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFVQFSKREEA 995
S + KASRTLYV+GIPQ+ N DALLSHFQKFG V+DIYIP NSEKAF+QFSKR EA
Sbjct: 452 SNQASSNKASRTLYVNGIPQESNRWDALLSHFQKFGQVIDIYIPSNSEKAFIQFSKRVEA 511
Query: 996 EAALKAPDAVMGNRFIKLWWANRDRALKGQXXXXXXXXXXXXIGVGYFPYRSLATEKEKE 1175
EAALKAPDAVMGNRFIKLWWANRDR V P S + +
Sbjct: 512 EAALKAPDAVMGNRFIKLWWANRDRITDEGESRISAKSLLTSSAV---PQPS--SSNRGK 566
Query: 1176 DLSSTLPHGSKLATSEV----VVSIPVPKSSANTSVITYTGKKKLDSLEALKEELRKKQE 1343
+L ST P + +++E P+P AN K+ +SLE L EELRKKQ+
Sbjct: 567 NLQSTAPSATSRSSTEASGPGTGHKPLP---ANNMTSVPPAPKRQESLEML-EELRKKQD 622
Query: 1344 NLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKTEPSRALNIPEGA 1523
LA KRDE R QLE + Q K + + + K+ LSN K R++N
Sbjct: 623 MLAQKRDELRRQLETYVNQ----KSSANSAKQAAAGGKEVLSNAVRKVGDGRSMNARTEG 678
Query: 1524 QEDINNTQEVRKLVDATASCTAKSNTTIMGNSSKEQTGHQHLSKL-----STCSLDNQST 1688
+ + T E +K+ AS + K T ++ K + +S L + LDN++T
Sbjct: 679 PQAVAGTLE-KKISGELASSSPKYAPT---STQKSVVAVKQMSPLLAPPQNRFKLDNRTT 734
Query: 1689 SFRVLPPLP 1715
SFR+LPPLP
Sbjct: 735 SFRILPPLP 743
>gb|EOY02483.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
Length = 941
Score = 345 bits (885), Expect = 3e-92
Identities = 242/616 (39%), Positives = 331/616 (53%), Gaps = 58/616 (9%)
Frame = +3
Query: 45 GTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXITPWLNMGMPHQRCRD 224
G G+ +V +AQ+ SW AFG ++GI N LD + LNMG+P QRCRD
Sbjct: 175 GRGLSNVTNAQSPSWSAFGLMSGIPNGGLDTLHPIGLQGALRPPMNSSLNMGIPRQRCRD 234
Query: 225 FDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHALGIQAGQRXXXXXXXX 404
F+E+G+CLRGD+CPMEHGVNRIV+EDVQSLSQFNL ++ N L AG
Sbjct: 235 FEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVTVPNAQLLATPAGP-GPLTSGVP 293
Query: 405 XXXXXXXXXXXXXXDGKLLLPEDSLKLN-VVSSSSGFVEADVYDPDQPLWN-NGCQGTSE 578
K + +D L LN + + S+ AD+YDPDQPLWN NG + ++
Sbjct: 294 PSTTLMNSKGIHSKSSKTGMADDVLGLNGIYTGSTSASGADLYDPDQPLWNKNGPEASAA 353
Query: 579 PTLMLSLENNDA-PLWNVDSST--HSSVQDQIDHS---------------------SRSE 686
+ + S + ++A PL N D S H ++D +D+ SRS
Sbjct: 354 LSGIHSPKLDEAEPLLNDDMSDRHHGRLRDSVDNELPIRGTGSQGTSLSVWGRIGGSRSR 413
Query: 687 LGSKTINNAGTTNLLSDEIK------------------VVNENSAVKASASVPEKQFNAE 812
+ +K + +++ L +E K + E+ K S + Q ++
Sbjct: 414 IDTKEKIDLTSSDYLENETKEEQEAFPSSQGTSRHVKHISTEDDGSKVMDSSFKSQTDSM 473
Query: 813 MSKKPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFVQFSKREE 992
+ + QKA RTL+V+GIPQK N R+ALLSHF+KFG+VVDIYIP NSE+AFVQFS+REE
Sbjct: 474 RNSRKPTQKALRTLFVNGIPQKSNKREALLSHFRKFGEVVDIYIPLNSERAFVQFSRREE 533
Query: 993 AEAALKAPDAVMGNRFIKLWWANRDRAL-KGQXXXXXXXXXXXXIGVGYFPYRSLATEKE 1169
AEAALKAPDAVMGNRFIKLWWANRD G + P ++ +
Sbjct: 534 AEAALKAPDAVMGNRFIKLWWANRDSIPDDGVSSGSGISITPRGLTASVIPSQTSVANRG 593
Query: 1170 KEDLSSTLPHGSKLATSEVVVSIPVPKS-SANTSVITYTGKKKLDSLEALKEELRKKQEN 1346
K++L +P S + V S+ PK SAN + +KK ++LE +KEELRKKQE
Sbjct: 594 KDNL-QPIPQKSNVVHGADVPSLNSPKPVSANGPKVPPPLQKKFETLEQMKEELRKKQEM 652
Query: 1347 LALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKTEPSRALNIPEGAQ 1526
L KR++FR QL+K EKQ+ VK D T E +KR K ++ + AK S ++ GA
Sbjct: 653 LEQKRNDFRRQLDKLEKQSSGVKGDLMT-EQAAKRQKVGIAADPAKA--STPMSSEPGAS 709
Query: 1527 EDINNT---QEVRKLVDATASCTAKSNTTIM---GNSSKEQT------GHQHLSKLSTCS 1670
T E K + S + KSNTT+ SSK+Q+ GH L ++
Sbjct: 710 AATPCTIGMTEKNKSTENVVSHSPKSNTTMALQESMSSKQQSRPSAPAGHPFL--MNRYK 767
Query: 1671 LDNQSTSFRVLPPLPA 1718
LDN+ +FRV+PPLP+
Sbjct: 768 LDNRPPAFRVIPPLPS 783
>ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Glycine max]
Length = 922
Score = 333 bits (855), Expect = 1e-88
Identities = 238/625 (38%), Positives = 325/625 (52%), Gaps = 53/625 (8%)
Frame = +3
Query: 3 QVVSQGLHTHASLFGTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXIT 182
Q+V QG + G G+P+V +AQN++W FG + + N LD I+
Sbjct: 161 QMVPQGSIPPSLYAGRGLPNVSNAQNAAWNTFGLIPAVPNGGLDMLHPMGLQGTLRAPIS 220
Query: 183 PWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHALG 362
LN+ +P QRCRDF+E+G+CLRGD+CPMEHGVNRIVIEDVQSLSQFNL +S + H +G
Sbjct: 221 SSLNVNIPRQRCRDFEERGFCLRGDMCPMEHGVNRIVIEDVQSLSQFNLPVSLPSAHLIG 280
Query: 363 IQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLNVVSSSSGFVE-ADVYDPD 539
AG K ++ +D L L+ V + G AD+YDPD
Sbjct: 281 APAGSGSLHSVNASTPSVNNKCLPGKI--SKSVVNDDGLPLDGVYTGPGCTSGADLYDPD 338
Query: 540 QPLWNNGCQGTSEPTLMLSLEN----------NDAPLWNVDSST----------HSSVQD 659
QPLWN+ C G +L+L++ NDAP + T SSV
Sbjct: 339 QPLWND-C-GLESSNALLTLQSSKIDESKPISNDAPDSDCPVGTARTSVSSQGASSSVWA 396
Query: 660 QIDHS-SRSELGSKTINNAGTTNLLSDEIKVVNENSAVKASASVPEKQFNAEMSK----- 821
+I S +R ++ KT + + N +++K N+ +AS KQ A+ +
Sbjct: 397 RIGSSKNRFDMKEKTNSTTSSFNYPENQLKEDNDELVGAHNASFQVKQNIADDADPKALE 456
Query: 822 -------------KPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEK 962
+ QKA TL+V+GIPQK N R+ALL+HF+KFG+V+DIYIP NSE+
Sbjct: 457 ASLKAQTDSMRNIRKSSQKAFCTLFVNGIPQKYNKREALLAHFKKFGEVIDIYIPLNSER 516
Query: 963 AFVQFSKREEAEAALKAPDAVMGNRFIKLWWANRDRALK-GQXXXXXXXXXXXXIGVGYF 1139
AFVQFSKREEAEAALKAPDAVMGNRFIKLWWANRD K +
Sbjct: 517 AFVQFSKREEAEAALKAPDAVMGNRFIKLWWANRDSIRKDSTTSGNGVIVTPRGQAPAFV 576
Query: 1140 PYRSLATEKEKE----DLSSTLPHGSKLATSEVVVSIPVPKSSANTSVITYTGKKKLDSL 1307
P + T++ K+ D S T+ S V PK + +KKL +L
Sbjct: 577 PSHPVVTDRGKDIHQADASKTMYEVSSPTDQSKPVITDGPK-------VPPPLQKKLVNL 629
Query: 1308 EALKEELRKKQENLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKT 1487
E+LKEELRKKQE L KR+EF+ QL KFEKQA +K E + E +KRLK +++ AK
Sbjct: 630 ESLKEELRKKQEMLDQKRNEFKRQLNKFEKQASGLK-GEVSTEQATKRLKMGGTSDVAK- 687
Query: 1488 EPSRALNIPEGAQEDINNT--------QEVRKLVDATASCTAKSNTTIMGNSSKEQTGHQ 1643
L P+ + D+ T + ++LV + S T + S+ + Q
Sbjct: 688 -----LASPQSSDADVGMTSPHTEATADKNKQLVYPVSQSPKSSTATRLQESTGLKHPIQ 742
Query: 1644 HLSKLSTCSLDNQSTSFRVLPPLPA 1718
L ++ LDN+ +FR++PPLPA
Sbjct: 743 PLMPVNRYKLDNRPAAFRIIPPLPA 767
>ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
gi|223536016|gb|EEF37674.1| rrm/rnp domain, putative
[Ricinus communis]
Length = 972
Score = 333 bits (854), Expect = 1e-88
Identities = 234/639 (36%), Positives = 325/639 (50%), Gaps = 68/639 (10%)
Frame = +3
Query: 3 QVVSQGLHTHASLFGTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXIT 182
Q+V QG T G G+P+V + QNSSW FG + GI + LD +
Sbjct: 160 QMVQQGSITPGLFAGRGLPNVSNTQNSSWNTFGLIPGIPSGGLDTLHPIGLQGTLRPAVN 219
Query: 183 PWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHALG 362
LN+G+P QRCRDF+E+G+CLRGD+CPMEHG+NRIV+EDVQSLSQFNL +S + +G
Sbjct: 220 SSLNIGIPRQRCRDFEERGFCLRGDMCPMEHGINRIVVEDVQSLSQFNLPVSLPSAPLVG 279
Query: 363 IQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLN-VVSSSSGFVEADVYDPD 539
AG + K + +D + N S S+ AD+YDPD
Sbjct: 280 TPAGP-GALQSVGASSTTLMNSKGLHSRNSKSGMVDDGMGFNGAYSVSAAGSGADLYDPD 338
Query: 540 QPLWNNGCQGTSEPTLMLSLENND--APLWNVDSST--HSSVQDQIDH------------ 671
QPLWN TS L L ND +V +S H ++D D+
Sbjct: 339 QPLWNTNGPETSSGLLALHSSKNDETESFMSVGTSDHHHGRLRDNADNECGMRNTAIPDG 398
Query: 672 ---------------SSRSELGSKTINNAGTTNLLSDEIK------------------VV 752
+R ++ KT T++ L +E K ++
Sbjct: 399 SQTTSSSVWGRVGSVKNRLDMKEKTDLTVSTSDYLENETKEDQDALANIQGTSRQGKRMI 458
Query: 753 NENSAVKASASVPEKQFNAEMSKKPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVV 932
+E+S K + Q ++ + + QKA TL+V GIPQK+N RD+LLSHFQKFG V+
Sbjct: 459 SEDSGPKTLDFSTKTQGDSMRNTRKSSQKALCTLFVSGIPQKNNKRDSLLSHFQKFGLVI 518
Query: 933 DIYIPQNSEKAFVQFSKREEAEAALKAPDAVMGNRFIKLWWANRDRALKGQXXXXXXXXX 1112
DIYIP NSE+AFVQFS+REEAEAAL+APDAVMGNRFIKLWWANRD +++G
Sbjct: 519 DIYIPSNSERAFVQFSRREEAEAALRAPDAVMGNRFIKLWWANRD-SIRGDGISSCQSIS 577
Query: 1113 XXXIGV--GYFPYRSLATEKEKEDLSSTLPHGSKLATSEVVVSIPVPKSSANTSVITYTG 1286
GV P + + K++L S G+ + + +P + VIT
Sbjct: 578 ATPCGVPGASVPPQPFIANRGKDNLQSAASKGATVPPPDA----SLPPTDHPKPVITNGP 633
Query: 1287 K------KKLDSLEALKEELRKKQENLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSK 1448
K KKL+ LE LKEELRKKQE LA KR++FR QL+K EKQA VK E +EP +K
Sbjct: 634 KVPPPLQKKLE-LEQLKEELRKKQELLAQKRNDFRRQLDKLEKQATGVK-GEVVVEPAAK 691
Query: 1449 RLKKDLSNEGAKTEPSRALNIPEGAQEDINNTQEVRKLVDATASCTAKSNTTIMGNSSKE 1628
R + ++ + K R+ G + + + K + S + K+N ++M +E
Sbjct: 692 RHRVGMATDIVKVPTLRS----SGHVLGVPSPRGENKSFENPMSSSPKNNASLM---QQE 744
Query: 1629 QTGHQHLSK----------LSTCSLDNQSTSFRVLPPLP 1715
TG + + ++ LDN+ T+FR++PPLP
Sbjct: 745 TTGSRQPIRPVGPAGAPFSVNRFKLDNRPTTFRIIPPLP 783
>ref|XP_006446567.1| hypothetical protein CICLE_v10014173mg [Citrus clementina]
gi|557549178|gb|ESR59807.1| hypothetical protein
CICLE_v10014173mg [Citrus clementina]
Length = 946
Score = 331 bits (848), Expect = 7e-88
Identities = 241/623 (38%), Positives = 318/623 (51%), Gaps = 66/623 (10%)
Frame = +3
Query: 45 GTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXITPWLNMGMPHQRCRD 224
G G+P++ ++QN+S+ AFG + G+ N LD + LNMG+ QRCRD
Sbjct: 175 GRGLPNISNSQNASF-AFGLIPGVPNGGLDTLPSIGLQGTLRPPLNSSLNMGISRQRCRD 233
Query: 225 FDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHALGIQAGQRXXXXXXXX 404
F+E+G+CLRGD+CPMEHGVNRIV+EDVQSLSQFNL++ + L AG
Sbjct: 234 FEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLTVPLPSAPLLATPAGP-GLLSSVGA 292
Query: 405 XXXXXXXXXXXXXXDGKLLLPEDSLKLN-VVSSSSGFVEADVYDPDQPLWNNGCQGTSEP 581
K L +D + LN S S+ AD+YDPDQPLWNN TS
Sbjct: 293 ASTTLMNSKGVHNKGSKTGLMDDGMGLNGAYSDSAAAGGADLYDPDQPLWNNNGPDTSPG 352
Query: 582 TLMLSLEN------------------------NDAPLWN-----VDSSTHSSVQDQIDHS 674
L N ND P+ N V +T SV +I S
Sbjct: 353 LAALHSSNDETESLLNEDSSNNHHLRASDSADNDLPVRNAGTAAVSQNTSMSVWGRIGSS 412
Query: 675 -SRSELGSKTINNAGTTNLLSDEIKV-----------------VNENSAVKASASVPEKQ 800
+RS + K + + L +E K + E A++ + K
Sbjct: 413 KNRSNVKEKIDATLNSLDYLENETKEDREALPSLQGSYHRGKRIIEGDAIQKNMDPSTKA 472
Query: 801 FNAEMSKKPMP-QKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFVQF 977
N M P QKA RTL+V+ +P K N R+ALLSHFQKFG+VVDIYIP NSE+AFVQF
Sbjct: 473 QNDHMRNIRKPSQKALRTLFVNNVPLKSNRREALLSHFQKFGEVVDIYIPLNSERAFVQF 532
Query: 978 SKREEAEAALKAPDAVMGNRFIKLWWANRDRALKGQXXXXXXXXXXXXIGVGYFPYRSLA 1157
SKREEAEAALK+PDAVMGNRFIKLWWANRD + FP +
Sbjct: 533 SKREEAEAALKSPDAVMGNRFIKLWWANRDSIPDDGISGVNVSMTSHGMTAASFPAHTSV 592
Query: 1158 TEKEKED--LSSTLPHGSKLATSEVVVSIPVPKSSANTSVITYTGK------KKLDSLEA 1313
T K K++ S+TL G+ + ++ VS+P P + +VIT + K KKLD+LE
Sbjct: 593 TNKVKDNNLQSTTLKGGNIVPAAD--VSLPAPD---HPTVITNSPKPPPPLQKKLDNLEQ 647
Query: 1314 LKEELRKKQENLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKTEP 1493
LKEELRKKQE L KR++FR QL+K EKQA + E +KRLK ++ + AK
Sbjct: 648 LKEELRKKQELLDQKRNDFRRQLDKLEKQA--GGKSDVVSEKAAKRLKVGIAADVAKATA 705
Query: 1494 SRALNIPEGAQEDINNTQEVRKLVDATASCTAKSNTTIM---GNSSKEQ------TGHQH 1646
+ + A + KLVD S + K NT ++ S K+Q G
Sbjct: 706 RSSDSTAAVASPHAEMMADKNKLVDIVLSPSQKVNTAMVLQESTSFKQQIRPLAPAGPPF 765
Query: 1647 LSKLSTCSLDNQSTSFRVLPPLP 1715
L ++ LDN+ T+FR++PPLP
Sbjct: 766 L--MNRYKLDNRPTAFRIIPPLP 786
>ref|XP_004975433.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
[Setaria italica]
Length = 900
Score = 330 bits (846), Expect = 1e-87
Identities = 236/608 (38%), Positives = 319/608 (52%), Gaps = 36/608 (5%)
Frame = +3
Query: 3 QVVSQGLHTHASLF-GTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXI 179
Q+ QG H SLF G +PS G +GF+ G+ + ILD +
Sbjct: 164 QMAPQGPPAHPSLFMGAALPS---------GPYGFMPGMPHGILDPIHPLGMQGPIQPAV 214
Query: 180 TPWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHAL 359
+P +++G+P QRCRDF+E+G+CLRGD+CPMEHGVNRIV++D+QSLSQFNL +S N L
Sbjct: 215 SPLIDLGLPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVDDMQSLSQFNLPVSVPNTQGL 274
Query: 360 GIQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLNVVSSSSGFVEADVYDPD 539
GIQ + K + D++KLN S++S +ADVYDPD
Sbjct: 275 GIQ-----------NEGGTGSVSKSVPAKEVKSGVASDAVKLNG-STTSAVADADVYDPD 322
Query: 540 QPLWNNGCQGTSEPTLMLSLENNDAPLWNVDSSTHSSVQDQ------------IDHSSRS 683
QPLWNN S + DA +WN +SS + Q+ + S
Sbjct: 323 QPLWNNEHPEAS----CAGFVHTDAGMWNPESSGYEMGQEHSNQVFATDGSQGLKSSVWG 378
Query: 684 ELGSKTINNAGTTNLLSDEIKVVNENS-------AVKASASVPEKQFNAEMSKK------ 824
+ SK + T ++ N+ S + S S K N + + +
Sbjct: 379 RIASKRKSGTSNTAKITSTSTTGNQKSDYDEMAPSTAQSKSAAAKDTNGQSNSRIYGDVG 438
Query: 825 ----PMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFVQFSKREE 992
KASRTLYVHGIPQ++N +ALLSHFQKFG V+DIYIP NSEKAFVQFSKREE
Sbjct: 439 RQSNRAAHKASRTLYVHGIPQENNRWEALLSHFQKFGQVIDIYIPSNSEKAFVQFSKREE 498
Query: 993 AEAALKAPDAVMGNRFIKLWWANRDRAL-KGQXXXXXXXXXXXXIGVGYFPYRSLATE-K 1166
AEAALKAPDAVMGNRFI+LWWANRDR +G+ + P S K
Sbjct: 499 AEAALKAPDAVMGNRFIRLWWANRDRIPDEGEGRIPAKSSQSSTMLANSAPQPSYPNRVK 558
Query: 1167 EKEDLSSTLPHGSKLATSEVVVSIPVPKSSANTSVITY-TGKKKLDSLEALKEELRKKQE 1343
E L+ P S +++E + S K+ + +S+ K+ +SLE L EELRKKQE
Sbjct: 559 ENVQLA---PRPSSGSSAEPLSSGTGSKTLSTSSIKPIPNAPKRHESLELL-EELRKKQE 614
Query: 1344 NLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKTEPSRALNI-PEG 1520
LA KRDEFR QLEK KQ K +++ K+ SN+ +K + +R+++ EG
Sbjct: 615 ILAQKRDEFRRQLEKLAKQ----KGSANSVKHAEASGKEVASNDASKVKDARSMSARAEG 670
Query: 1521 AQEDINNTQEVRKLVDATASCTAKSNTTIMGNSSKEQTGHQHL--SKLSTCSLDNQSTSF 1694
+QE + + ++ ASC+ KS I S T L + LDN++TSF
Sbjct: 671 SQEVAGSLE--KQSSGELASCSQKS-AEISTQKSAVVTKQTTLLVPPQNRFKLDNRTTSF 727
Query: 1695 RVLPPLPA 1718
R+LPPLP+
Sbjct: 728 RILPPLPS 735
>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41-like [Vitis
vinifera]
Length = 948
Score = 330 bits (845), Expect = 2e-87
Identities = 232/624 (37%), Positives = 312/624 (50%), Gaps = 67/624 (10%)
Frame = +3
Query: 45 GTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXITPWLNMGMPHQRCRD 224
G G+P+V + QN+SW FG + GI N LD ++ LN +P QRCRD
Sbjct: 174 GRGLPNVSNTQNASWSGFGLLPGIPNGALDSLHSLGLQGTLRPPLSTSLNKSIPRQRCRD 233
Query: 225 FDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHALGIQAGQRXXXXXXXX 404
F+E+G+CLRGD+CPMEHGVNRIV+EDVQSLSQFNL +S + H LG AG
Sbjct: 234 FEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLPSAHLLGTPAGP-GPLPSVNA 292
Query: 405 XXXXXXXXXXXXXXDGKLLLPEDSLKLNVVSSSSGFVE-ADVYDPDQPLWNNGCQGTSEP 581
GK + ED L LN S S A++YDPDQPLWNN C T P
Sbjct: 293 PPSTLMNSKGFQNKSGKPEVAEDELGLNGAFSGSAVGGGAELYDPDQPLWNNDCPET--P 350
Query: 582 TLMLSLEN---------------------------NDAPLWNVDS-----STHSSVQDQI 665
+ +L+L + N P+ N + ST+ SV +I
Sbjct: 351 SALLALHSPKIDETECLLDANSSDRYHARLCDGSDNGRPVKNTGTTVGSQSTNVSVWGRI 410
Query: 666 DHSS-RSELGSKTINNAGTTNLLSDEIK------------------VVNENSAVKASASV 788
+ R E K + +++ L +E K ++ E+ K
Sbjct: 411 GGAKDRLEAKEKIDSVISSSDYLENEGKEDQEALTSVQGTSRQGKRIIVEDIGSKNVDLS 470
Query: 789 PEKQFNAEMSKKPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAF 968
Q +A + + QKA RTL+V+GIPQK+N ++ALLSHF+KFG+V+DIYIP NSE+AF
Sbjct: 471 SRTQSDAMRNIRKPSQKALRTLFVNGIPQKNNRKEALLSHFRKFGEVIDIYIPLNSERAF 530
Query: 969 VQFSKREEAEAALKAPDAVMGNRFIKLWWANRDRALKGQ-XXXXXXXXXXXXIGVGYFPY 1145
VQFSKREEAEAAL+APDAVMGNRFIKLWWANRD + P
Sbjct: 531 VQFSKREEAEAALQAPDAVMGNRFIKLWWANRDSVPDDSISGGNGASVIPHGVTAASVPS 590
Query: 1146 RSLATEKEKEDLSSTLPHGSKLATSEVVVSIPVPKSSANTSVITYTGK------KKLDSL 1307
A + K++L S P + + P P S + ++T K KKL+SL
Sbjct: 591 HPSAVNRAKDNLQSAAPK----VNAVHAIDAPSPTSDHSKPIVTNGPKAPPPLQKKLESL 646
Query: 1308 EALKEELRKKQENLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAK- 1484
E +KEELRKKQE L KR++FR QL+K EKQA +K E E +KR K + + AK
Sbjct: 647 ELMKEELRKKQEMLDQKRNDFRRQLDKLEKQATGLK-GEVGAEQAAKRPKVGIVGDAAKA 705
Query: 1485 -----TEPSRALNIP--EGAQEDINNTQEVRKLVDATASCTAKSNTTIMGNSSKEQTGHQ 1643
T+P A+ P E + + + V T S T++ S +
Sbjct: 706 ATPRCTDPGIAVGSPQTEITMDKNKSAENVVPYSSKTNSAMVLLEPTVLKQSVRPLALGG 765
Query: 1644 HLSKLSTCSLDNQSTSFRVLPPLP 1715
S+++ LDN+ FR++ PLP
Sbjct: 766 TPSQMNRYKLDNRPMGFRIMAPLP 789
>ref|XP_003554702.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like isoform
X1 [Glycine max] gi|571553148|ref|XP_006603780.1|
PREDICTED: zinc finger CCCH domain-containing protein
41-like isoform X2 [Glycine max]
gi|571553154|ref|XP_006603781.1| PREDICTED: zinc finger
CCCH domain-containing protein 41-like isoform X3
[Glycine max] gi|571553158|ref|XP_006603782.1| PREDICTED:
zinc finger CCCH domain-containing protein 41-like
isoform X4 [Glycine max]
Length = 945
Score = 329 bits (843), Expect = 3e-87
Identities = 238/625 (38%), Positives = 324/625 (51%), Gaps = 53/625 (8%)
Frame = +3
Query: 3 QVVSQGLHTHASLFGTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXIT 182
QVV QG + G G+ +V +AQN+SW FG + + N LD I
Sbjct: 161 QVVPQGSIPPSLYAGRGLLNVSNAQNASWNTFGLIPAVPNGGLDMLHPMGLQGTLRPPIN 220
Query: 183 PWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHALG 362
LN+ +P QRCRDF+E+G+CLRGD+CPMEHGVNRIVIEDVQSLSQFNL +S + H +G
Sbjct: 221 SSLNVNIPRQRCRDFEERGFCLRGDMCPMEHGVNRIVIEDVQSLSQFNLPVSLPSAHLIG 280
Query: 363 IQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLNVVSSSSGFVE-ADVYDPD 539
AG K ++ +D L L+ V + G AD+YDPD
Sbjct: 281 APAGSGPLHSVNASTTLMNNKCLPGKI--SKSVVNDDGLPLDGVYTGPGCTSGADLYDPD 338
Query: 540 QPLWNNGCQGTSEPTLMLSLEN----------NDAP---------LWNVDSS-THSSVQD 659
QPLWN+ C G +L+L++ NDAP +V S T SSV
Sbjct: 339 QPLWND-C-GLESSNALLTLQSSKIDESEPISNDAPDSDCPVGTARTSVSSQGTSSSVWA 396
Query: 660 QIDHS-SRSELGSKTINNAGTTNLLSDEIKVVNENSAVKASASVPEKQFNAEMSK----- 821
+I S +R ++ KT + + N +++K N+ +AS KQ A+ +
Sbjct: 397 RIGSSKNRFDMKEKTNSTMSSFNYPENQLKEDNDELVSAHNASFQVKQSIADDADPKALE 456
Query: 822 -------------KPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEK 962
+ QKA TL+V+GIPQK+N R+ALL+HF+KFG+V+DIYIP NSE+
Sbjct: 457 ASLKAQTDSMRNIRKSSQKALCTLFVNGIPQKNNKREALLAHFKKFGEVIDIYIPLNSER 516
Query: 963 AFVQFSKREEAEAALKAPDAVMGNRFIKLWWANRDRALK-GQXXXXXXXXXXXXIGVGYF 1139
AFVQFSKREEAEAALKAPDAVMGNRFIKLWWANRD K +
Sbjct: 517 AFVQFSKREEAEAALKAPDAVMGNRFIKLWWANRDSIRKDSTTSGNGVIVTPRGQAPAFV 576
Query: 1140 PYRSLATEKEKE----DLSSTLPHGSKLATSEVVVSIPVPKSSANTSVITYTGKKKLDSL 1307
P + T++ K+ D S T+ S V PK + +KKL +L
Sbjct: 577 PSHPVVTDRGKDIHQADASKTMYEVSSPTDQSKPVITDGPK-------VPPPLQKKLVNL 629
Query: 1308 EALKEELRKKQENLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKT 1487
E LKEELRKKQE L KR+EF+ QL KFEKQA +K E + E +KRLK + ++ AK
Sbjct: 630 ENLKEELRKKQEMLDQKRNEFKRQLNKFEKQASGLK-GEVSTEQAAKRLKMCVPSDVAK- 687
Query: 1488 EPSRALNIPEGAQEDIN--------NTQEVRKLVDATASCTAKSNTTIMGNSSKEQTGHQ 1643
L P+ + D+ + ++LV+ + S T + S+ + Q
Sbjct: 688 -----LASPQSSDADVGMASPHTEAAADKNKQLVNPVSRSPKASTATRLQESTGLKHPIQ 742
Query: 1644 HLSKLSTCSLDNQSTSFRVLPPLPA 1718
L ++ LDN+ +F ++PPLP+
Sbjct: 743 PLMPVNRYKLDNRPAAFCIIPPLPS 767
>ref|XP_004252213.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Solanum lycopersicum]
Length = 877
Score = 325 bits (833), Expect = 4e-86
Identities = 233/629 (37%), Positives = 308/629 (48%), Gaps = 57/629 (9%)
Frame = +3
Query: 3 QVVSQGLHTHASLFGTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXIT 182
Q+ QG T L G G+ ++ +AQ+SSW AFG V+GI+N LD +
Sbjct: 144 QLFPQGSVTPGLLTGRGVENIANAQSSSWSAFGMVSGISNGGLDTLHSVGFQGTLRPSLN 203
Query: 183 PWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHALG 362
P +NMG+P QRCRDF+E+G+CLRGD+CPMEHGVNRIV+EDVQSLSQFNL +S N H LG
Sbjct: 204 PTMNMGIPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLPNAHMLG 263
Query: 363 IQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLN---VVSSSSGFVEADVYD 533
GQ K + +D+L L V S +G AD YD
Sbjct: 264 PVTGQ---GSLPVIGPSGSLASGKALHNKSKFPVIDDALGLTDAFVDGSMAG--GADFYD 318
Query: 534 PDQPLWNNGCQGTSEPTLMLSLENND--APLWNVDSSTHSSV----QDQIDHSSRSELGS 695
PDQPLW+N S L+ N D L DSS + V ++H R +
Sbjct: 319 PDQPLWSNDRSEISAALQNLNSSNCDDTGRLLVEDSSDNDQVGLCNAFDLEHPLRGAKAA 378
Query: 696 KTINNAGTTNLLSDEIKVVNENSAVKASAS-------------------VPEKQFNAE-- 812
+ N S V E +A +AS +P K N E
Sbjct: 379 TGSQSVWGRNRRSKNKLNVKERTACTGNASSFDETGKDLELLGSSQGIFLPGKLMNEETI 438
Query: 813 ------MSKKPM----------PQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYI 944
S +P PQKA RTL+V GIPQ+DN DALLSHF+KFG+V+DI+I
Sbjct: 439 DPQMKDFSSRPQSSSGHNLRKPPQKALRTLFVRGIPQRDNKLDALLSHFKKFGEVIDIHI 498
Query: 945 PQNSEKAFVQFSKREEAEAALKAPDAVMGNRFIKLWWANRDRAL-KGQXXXXXXXXXXXX 1121
P + ++AFVQFSKREEAEAALKAPDAVMGNRFI+L WANRDR + G
Sbjct: 499 PLSGDRAFVQFSKREEAEAALKAPDAVMGNRFIRLLWANRDRIMDDGVNGVSNSPLTSRG 558
Query: 1122 IGVGYFPYRSLATEKEKEDLSSTLP----HGSKLATSEVVVSIPVPKSSANTSVITYTGK 1289
+ P K +++ S+ P HG + + PV + + +
Sbjct: 559 VTPSLVPPHLSVPYKGNDNIQSSAPKAAEHGPVAPSPTSALPKPVGHNGPKAAPAL---Q 615
Query: 1290 KKLDSLEALKEELRKKQENLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLS 1469
KK+ SLE LK ELRKKQE L KR EFR QL K EKQAV VK + + + K+ + +
Sbjct: 616 KKVASLELLKVELRKKQELLDQKRSEFRRQLNKLEKQAVGVKAEAISDQDLEKQKEGETV 675
Query: 1470 NEGAKT-EPSRALNIPEGAQEDI-----NNTQEVRKLVDATASCTAKSNTTIMGNSSKEQ 1631
++ K S LN Q ++ +T+ + S A + + S
Sbjct: 676 SDSTKVRSSSMRLNDVSSTQAEVVSDNNRSTENAEHSCPISCSAAATQEPSSLRQSIPPV 735
Query: 1632 TGHQHLSKLSTCSLDNQSTSFRVLPPLPA 1718
H + LDN+ T+F+VLPP+P+
Sbjct: 736 APHGAPFVFNRYKLDNRPTAFKVLPPMPS 764
>ref|XP_006341318.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Solanum tuberosum]
Length = 924
Score = 322 bits (826), Expect = 2e-85
Identities = 235/630 (37%), Positives = 306/630 (48%), Gaps = 58/630 (9%)
Frame = +3
Query: 3 QVVSQGLHTHASLFGTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXIT 182
Q+ QG T G G+ +V +AQ+SSW AFG V GI+N LD +
Sbjct: 144 QLFPQGSVTPGQFTGRGVENVANAQSSSWSAFGMVPGISNGGLDTLHSVGFQGTLRPSLN 203
Query: 183 PWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHALG 362
+NMG+P QRCRDF+E+G+CLRGD+CPMEHGVNRIV+EDVQSLSQFNL +S N H LG
Sbjct: 204 HTMNMGIPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLPNAHMLG 263
Query: 363 IQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLN---VVSSSSGFVEADVYD 533
GQ K + +D+L L V S +G AD YD
Sbjct: 264 PVTGQ---GSLPVIGPSGSLASGKALHNKSKFPVIDDALGLTDAFVDGSMAG--GADFYD 318
Query: 534 PDQPLWNNGCQGTSEPTLMLSLENND--APLWNVDSSTHSSV----QDQIDHSSRSELGS 695
PDQPLW+N TS L+ N D L DSS + V ++H R +
Sbjct: 319 PDQPLWSNDRSETSAALQNLNPSNFDDTGRLLVEDSSDNDQVGLCNAFDLEHPLRGAKAA 378
Query: 696 KTINNAGTTNLLSDEIKVVNENSAVKASAS-----------------VPEKQFNAEMSKK 824
+ N S V E +A +AS +P K N E
Sbjct: 379 TGSQSVWGRNRRSKNKLNVKERTACTGNASSFDETGKDLLRSSQGIFLPGKLMNEETIDP 438
Query: 825 PM------------------PQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQ 950
M QKA RTL+V GIPQ+DN DALLSHF+KFG+V+DI+IP
Sbjct: 439 QMKDFSSLPQSSSGHNIRKPSQKALRTLFVRGIPQRDNKLDALLSHFKKFGEVIDIHIPL 498
Query: 951 NSEKAFVQFSKREEAEAALKAPDAVMGNRFIKLWWANRDRAL-KGQXXXXXXXXXXXXIG 1127
+ ++AFVQFSKREEAEAALKAPDAVMGNRFIKL WANRDR + G +
Sbjct: 499 SGDRAFVQFSKREEAEAALKAPDAVMGNRFIKLLWANRDRIMDDGVNGVSNSPLTPRGVT 558
Query: 1128 VGYFPYRSLATEKEKEDLSSTLPHGSKLATSEVVVSIPVPKSSANTSVITYTGKK----- 1292
P K K+++ S S L +E P P +SA + + G K
Sbjct: 559 SSLVPPHLSVPYKGKDNIQS-----SALKAAEHGPVAPSP-TSALPKPVAHNGPKAAPAL 612
Query: 1293 --KLDSLEALKEELRKKQENLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDL 1466
K+ SLE LKEELRKKQE L KR+EFR QL K EKQAV VK + + + K+ + +
Sbjct: 613 QTKVASLELLKEELRKKQELLDQKRNEFRRQLNKLEKQAVGVKAEAVSDQDLEKQKEGET 672
Query: 1467 SNEGAKTEPSR------ALNIPEGAQEDINNTQEVRKLVDATASCTAKSNTTIMGNSSKE 1628
++ K S + E ++ +T+ + S A + + S
Sbjct: 673 VSDSTKVRSSSMRLNDVSSTQAEAVSDNSRSTENAEHSCPISCSAAATQEPSSLRQSIPP 732
Query: 1629 QTGHQHLSKLSTCSLDNQSTSFRVLPPLPA 1718
H + LDN+ T+F+VLPP+P+
Sbjct: 733 VAPHGAAFIFNRYKLDNRPTAFKVLPPMPS 762
>ref|XP_006470267.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like isoform
X1 [Citrus sinensis] gi|568832073|ref|XP_006470268.1|
PREDICTED: zinc finger CCCH domain-containing protein
41-like isoform X2 [Citrus sinensis]
gi|568832075|ref|XP_006470269.1| PREDICTED: zinc finger
CCCH domain-containing protein 41-like isoform X3 [Citrus
sinensis] gi|568832077|ref|XP_006470270.1| PREDICTED:
zinc finger CCCH domain-containing protein 41-like
isoform X4 [Citrus sinensis]
Length = 947
Score = 322 bits (824), Expect = 4e-85
Identities = 239/624 (38%), Positives = 317/624 (50%), Gaps = 67/624 (10%)
Frame = +3
Query: 45 GTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXITPWLNMGMPHQRCRD 224
G G+P++ ++QN+S+ AFG + G+ N LD + LNMG+ QRCRD
Sbjct: 175 GRGLPNISNSQNASF-AFGLIPGVPNGGLDTLPSIGLQGTLRPPLNSSLNMGISRQRCRD 233
Query: 225 FDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHALGIQAGQRXXXXXXXX 404
F+E+G+CLRGD+CPMEHGVNRIV+EDVQSLSQFNL++ + L AG
Sbjct: 234 FEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLTVPLPSTPLLATPAGP-GLLSSVGA 292
Query: 405 XXXXXXXXXXXXXXDGKLLLPEDSLKLN-VVSSSSGFVEADVYDPDQPLWNNGCQGTSEP 581
K L +D + LN S S+ AD+YDPDQPLWNN TS
Sbjct: 293 ASTTLMNSKGVHSKGSKTGLMDDGMGLNGAYSDSAAAGGADLYDPDQPLWNNNGPDTSPG 352
Query: 582 TLMLSLEN------------------------NDAPLWN-----VDSSTHSSVQDQIDHS 674
L N ND P+ N V +T SV +I S
Sbjct: 353 LAALHSSNDETESLLNEDSSNNHHRRASDSADNDLPVRNAGTAAVSQNTSMSVWGRIGSS 412
Query: 675 -SRSELGSKTINNAGTTNLLSDEIKV-----------------VNENSAVKASASVPEKQ 800
+RS + K + + L +E K + E A++ + K
Sbjct: 413 KNRSNVKEKIDATLNSLDYLENETKEDREALPSLQGSYRRGKRIIEGDAIQKNMDPSTKA 472
Query: 801 FNAEMSKKPMP-QKASRTLYVHGIPQKDNTRDALLSHFQKFGDVVDIYIPQNSEKAFVQF 977
+ M P QKA RTL+V+ +P K N R+ALLSHFQKFG+VVDIYIP NSE+AFVQF
Sbjct: 473 QSDHMRNIRKPSQKALRTLFVNNVPLKSNRREALLSHFQKFGEVVDIYIPLNSERAFVQF 532
Query: 978 SKREEAEAALKAPDAVMGNRFIKLWWANRDRAL-KGQXXXXXXXXXXXXIGVGYFPYRSL 1154
SKREEAEAALK+PDAVMGNRFIKLWWANRD G + P +
Sbjct: 533 SKREEAEAALKSPDAVMGNRFIKLWWANRDSIPDDGISSGVNVSVTSHGMTAASVPAHTS 592
Query: 1155 ATEKEKED--LSSTLPHGSKLATSEVVVSIPVPKSSANTSVITYTGK------KKLDSLE 1310
K K++ S+TL G+ + ++ VS+P P + +VIT + K KKLD+LE
Sbjct: 593 VANKVKDNHLQSTTLKGGNIVPAAD--VSLPAPD---HPTVITNSPKPPPPLQKKLDNLE 647
Query: 1311 ALKEELRKKQENLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKKDLSNEGAKTE 1490
LKEELRKKQE L KR++FR QL+K EKQA + E +KRLK ++ + AK
Sbjct: 648 QLKEELRKKQELLDQKRNDFRRQLDKLEKQA--GGKSDVVSEKAAKRLKVGIAADVAKAT 705
Query: 1491 PSRALNIPEGAQEDINNTQEVRKLVDATASCTAKSNTTIM---GNSSKEQ------TGHQ 1643
+ + A + KLVD S + K NT ++ S K+Q G
Sbjct: 706 ARSSDSTAAVASPRAEMMADKNKLVDIVLSPSQKVNTAMVLQESTSFKQQIRPLAPAGPP 765
Query: 1644 HLSKLSTCSLDNQSTSFRVLPPLP 1715
L ++ LDN+ T+FR++PPLP
Sbjct: 766 FL--MNRYKLDNRPTAFRIMPPLP 787
>ref|XP_002300018.2| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|550348869|gb|EEE84823.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 981
Score = 321 bits (823), Expect = 5e-85
Identities = 231/633 (36%), Positives = 327/633 (51%), Gaps = 62/633 (9%)
Frame = +3
Query: 6 VVSQGLHTHASLF-GTGIPSVVSAQNSSWGAFGFVNGINNRILDXXXXXXXXXXXXXXIT 182
+ SQ H SLF G G+ +V + Q++SW AFG + ++N LD +
Sbjct: 158 IASQMAHLGPSLFAGRGLANVSNVQSASWNAFGLMPRMSNGGLDTIHPIGLQGTLRPAVN 217
Query: 183 PWLNMGMPHQRCRDFDEQGYCLRGDICPMEHGVNRIVIEDVQSLSQFNLSLSDRNLHALG 362
LNMG+PHQRCRDF+E+G+CLRGD+CP+EHGVNRIV+EDVQSLSQFNL +S G
Sbjct: 218 SSLNMGIPHQRCRDFEERGFCLRGDMCPLEHGVNRIVVEDVQSLSQFNLPVSLPRAQLPG 277
Query: 363 IQAGQRXXXXXXXXXXXXXXXXXXXXXXDGKLLLPEDSLKLNVVSSSSGFVEA-DVYDPD 539
+G K + +D L LN + S V D+YDPD
Sbjct: 278 TTSGL-GAVPTVGAPPATLMNSKGMHGKSNKPGIVDDGLGLNGAYTGSVSVSGGDLYDPD 336
Query: 540 QPLWNNGCQGTSEPTL------------MLSLE-------------NNDAPL-------- 620
QPLWN+ TS L M+S++ +N+ P+
Sbjct: 337 QPLWNDNGPETSSTLLAPHSPKFDETESMISVDPSDHNHARLRDGADNECPIRSTGIAVG 396
Query: 621 --------WNVDSSTHS--SVQDQIDH--SSRSELGSKTINNAGTTNLL---SDEIKVVN 755
W S ++ V+++ID S S + S++ + G + + S + K N
Sbjct: 397 FQGMNSSVWGRIGSLNNRLDVKEKIDSTVSMSSYMESESKEDQGALDNVHGTSHQGKCTN 456
Query: 756 ENSAVKASASVPEKQFNAEMSK-KPMPQKASRTLYVHGIPQKDNTRDALLSHFQKFGDVV 932
+ + P K + M + + QKA RTL+V+GIP K N RDALLSHFQKFG+V+
Sbjct: 457 FDDCGTKTMDSPAKIHSDTMRHTRKLSQKALRTLFVNGIPHKSNKRDALLSHFQKFGEVI 516
Query: 933 DIYIPQNSEKAFVQFSKREEAEAALKAPDAVMGNRFIKLWWANRDRALKGQXXXXXXXXX 1112
DIYIP NSE+AF+QFSKREEAEAAL+APDAVMGNRFI+LWWANRD
Sbjct: 517 DIYIPLNSERAFIQFSKREEAEAALRAPDAVMGNRFIRLWWANRD-------SIPDDATS 569
Query: 1113 XXXIGVGYFPYRSLATEKEKEDLSSTLPHGSKLATSEVVVSIPV---PK-SSANTSVITY 1280
P+ S+ K++L + + + TS+ S+P PK N ++
Sbjct: 570 RGVPATSGLPHLSIG-NSGKDNLQLAISKTTVVPTSD--TSMPATDHPKVDITNGPEVSP 626
Query: 1281 TGKKKLDSLEALKEELRKKQENLALKRDEFRLQLEKFEKQAVLVKMDEETLEPTSKRLKK 1460
+KKL++LE LKEELRKKQE L KR++FR QL K EKQA VK E EP SKR K
Sbjct: 627 PMQKKLENLEQLKEELRKKQELLDQKRNDFRRQLHKLEKQATGVK-GEVATEPASKRQKT 685
Query: 1461 DLSNEGAKTEPSRALNIPEGAQEDINNTQEVRKLVDATASCTAKSNT--TIMGNSSKEQT 1634
++++ AK +R+ + G + K ++ S + K++T + ++ +Q+
Sbjct: 686 GIASDVAKAATTRSADPGAGVASPHGGIVDKNKRMENIVSSSTKTSTVMALQESAGSKQS 745
Query: 1635 GHQHLS-----KLSTCSLDNQSTSFRVLPPLPA 1718
H ++ LDN+ T+F+++ PLPA
Sbjct: 746 IHPLAPVGPPFLMNKYKLDNRPTAFKIISPLPA 778