BLASTX nr result

ID: Zingiber23_contig00001420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00001420
         (742 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001169945.1| uncharacterized protein LOC100383843 [Zea ma...    64   4e-08
ref|XP_003578165.1| PREDICTED: uncharacterized protein LOC100826...    57   8e-06

>ref|NP_001169945.1| uncharacterized protein LOC100383843 [Zea mays]
           gi|224032495|gb|ACN35323.1| unknown [Zea mays]
          Length = 206

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 56/133 (42%), Positives = 60/133 (45%), Gaps = 33/133 (24%)
 Frame = -1

Query: 418 QS*TVGFLGSTASDPSPTTGASFLRSLFQ-SPLGV-GTETGESGTLRGEPAALDGDGGPP 245
           QS TVG LG   +  +P+    F RS FQ SPLGV     GESG     P A DGD G  
Sbjct: 30  QSYTVGLLGVPGAS-APSAILPFRRSFFQPSPLGVVAAPKGESGA----PLAGDGDDGAE 84

Query: 244 L--------------RRMVMLRVTWRAAGXXXXX-----------------RPESGRGPA 158
           L              R MVMLRVT   A                       RPESGRGPA
Sbjct: 85  LDSLRGDVATDSAAGRSMVMLRVTAGGAAPSAVGDGAADEGEKDACLRSLPRPESGRGPA 144

Query: 157 TVSSHRWCSSPIR 119
           TVSSH W  SP+R
Sbjct: 145 TVSSHSWSRSPMR 157


>ref|XP_003578165.1| PREDICTED: uncharacterized protein LOC100826495 [Brachypodium
           distachyon]
          Length = 134

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 45/125 (36%), Positives = 50/125 (40%), Gaps = 27/125 (21%)
 Frame = +3

Query: 123 MGLLHHLWDDTVAGPLPDSGLXXXXXPAALQ---------------VTRSITIL------ 239
           MGLL  LWDDTVAGP P+SGL      A+                 VTRSITIL      
Sbjct: 1   MGLLDQLWDDTVAGPRPESGLGKLRKYASFSPSSTAAAAPPADAPAVTRSITILRPPALS 60

Query: 240 --XXXXXXXXXXXXXXXXXXXXXXXXXXTPRGD-WKRLRRKLAPVVGEGSEAVE---PRK 401
                                       TPRGD W +LRRK      +G +A     PR 
Sbjct: 61  VPSAGSEAGGSAPSSPASVPDSPFGTARTPRGDGWSKLRRKGRMAAADGMDAASPGTPRS 120

Query: 402 PTVYD 416
           PTVYD
Sbjct: 121 PTVYD 125


Top