BLASTX nr result
ID: Zingiber23_contig00001178
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00001178
(972 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsu... 162 2e-37
gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao] 159 2e-36
emb|CBI32594.3| unnamed protein product [Vitis vinifera] 157 4e-36
ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein ... 157 4e-36
ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group] g... 157 6e-36
gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative,... 157 6e-36
emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group] 157 6e-36
dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu] 157 8e-36
gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding prote... 156 1e-35
gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group] 156 1e-35
gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indi... 156 1e-35
gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Ja... 156 1e-35
gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indi... 156 1e-35
gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subc... 156 1e-35
ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group] g... 156 1e-35
emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa I... 156 1e-35
gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza... 156 1e-35
ref|XP_006590896.1| PREDICTED: glycine-rich RNA-binding protein ... 155 3e-35
ref|XP_006487137.1| PREDICTED: glycine-rich RNA-binding protein-... 155 3e-35
gb|EPS70351.1| hypothetical protein M569_04412, partial [Genlise... 154 5e-35
>gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 162 bits (409), Expect = 2e-37
Identities = 78/89 (87%), Positives = 86/89 (96%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MAA+DVEFRCFVGGLAWATDD +LE AFS+FGEI+ESKIINDRETGRSRGFGFVTFRDE+
Sbjct: 1 MAAADVEFRCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEK 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNRRN 613
+MRDAIEGMNGQ LDGRNITVNEAQ+RR+
Sbjct: 61 AMRDAIEGMNGQNLDGRNITVNEAQSRRS 89
>gb|EOX98019.1| Glycine-rich RNA-binding protein 7 [Theobroma cacao]
Length = 168
Score = 159 bits (402), Expect = 2e-36
Identities = 75/89 (84%), Positives = 86/89 (96%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MA++D+EFRCFVGGLAWATDD +LE+AFS +GEI+ESKIINDRETGRSRGFGFVTFRDE+
Sbjct: 1 MASADIEFRCFVGGLAWATDDRALEQAFSQYGEIVESKIINDRETGRSRGFGFVTFRDEK 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNRRN 613
+MRDAIEGMNGQ LDGRNITVNEAQ+RR+
Sbjct: 61 AMRDAIEGMNGQNLDGRNITVNEAQSRRS 89
>emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 157 bits (398), Expect = 4e-36
Identities = 76/87 (87%), Positives = 82/87 (94%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MA++++E+RCFVGGLAWATDD SLERAFS FGEILESKIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MASAEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNR 619
SMRDAIEGMNGQ LDGRNITVNEAQ+R
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQSR 87
>ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 157 bits (398), Expect = 4e-36
Identities = 76/87 (87%), Positives = 82/87 (94%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MA++++E+RCFVGGLAWATDD SLERAFS FGEILESKIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MASAEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNR 619
SMRDAIEGMNGQ LDGRNITVNEAQ+R
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQSR 87
>ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding
protein GRP1A, putative, expressed [Oryza sativa
Japonica Group] gi|113649851|dbj|BAF30363.1|
Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein
OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 162
Score = 157 bits (397), Expect = 6e-36
Identities = 77/89 (86%), Positives = 83/89 (93%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MAA DVE+RCFVGGLAWATDD SLE AFS+FGEILESKIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNRRN 613
+MRDAIEGMNG+ LDGRNITVNEAQ+RR+
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSRRS 89
>gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
Length = 117
Score = 157 bits (397), Expect = 6e-36
Identities = 77/89 (86%), Positives = 83/89 (93%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MAA DVE+RCFVGGLAWATDD SLE AFS+FGEILESKIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNRRN 613
+MRDAIEGMNG+ LDGRNITVNEAQ+RR+
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSRRS 89
>emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 157 bits (397), Expect = 6e-36
Identities = 77/89 (86%), Positives = 83/89 (93%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MAA DVE+RCFVGGLAWATDD SLE AFS+FGEILESKIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNRRN 613
+MRDAIEGMNG+ LDGRNITVNEAQ+RR+
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSRRS 89
>dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 157 bits (396), Expect = 8e-36
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MA++DVEFRCFVGGLAWAT DSSL AFS++G+ILESKIINDRETGRSRGFGFVTFRDE+
Sbjct: 1 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEK 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNR 619
SMRDAIEGMNGQ LDGRNITVNEAQ+R
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQSR 87
>gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 156 bits (394), Expect = 1e-35
Identities = 75/87 (86%), Positives = 81/87 (93%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MA++DVE+RCFVGGLAWAT D SL AFS +GEILESKIINDRETGRSRGFGFVTF+DEQ
Sbjct: 1 MASADVEYRCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNR 619
SMRDAIEGMNGQ LDGRNITVNEAQ+R
Sbjct: 61 SMRDAIEGMNGQTLDGRNITVNEAQSR 87
>gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 156 bits (394), Expect = 1e-35
Identities = 76/89 (85%), Positives = 83/89 (93%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MAA DVE+RCFVGGLAWATDD SLE AFS++GEILESKIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNRRN 613
+MRDAIEGMNG+ LDGRNITVNEAQ+RR+
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSRRS 89
>gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 156 bits (394), Expect = 1e-35
Identities = 76/89 (85%), Positives = 83/89 (93%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MAA DVE+RCFVGGLAWATDD SLE AFS++GEIL+SKIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNRRN 613
SMRDAIEGMNG+ LDGRNITVNEAQ+RR+
Sbjct: 61 SMRDAIEGMNGKELDGRNITVNEAQSRRS 89
>gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding
protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding
protein [Oryza sativa]
Length = 161
Score = 156 bits (394), Expect = 1e-35
Identities = 76/89 (85%), Positives = 83/89 (93%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MAA DVE+RCFVGGLAWATDD SLE AFS++GEILESKIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNRRN 613
+MRDAIEGMNG+ LDGRNITVNEAQ+RR+
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSRRS 89
>gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 156 bits (394), Expect = 1e-35
Identities = 76/89 (85%), Positives = 83/89 (93%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MAA DVE+RCFVGGLAWATDD SLE AFS++GEILESKIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNRRN 613
+MRDAIEGMNG+ LDGRNITVNEAQ+RR+
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSRRS 89
>gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 156 bits (394), Expect = 1e-35
Identities = 76/89 (85%), Positives = 83/89 (93%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MAA DVE+RCFVGGLAWATDD SLE AFS++GEIL+SKIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNRRN 613
SMRDAIEGMNG+ LDGRNITVNEAQ+RR+
Sbjct: 61 SMRDAIEGMNGKELDGRNITVNEAQSRRS 89
>ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group] gi|113549341|dbj|BAF12784.1|
Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 156 bits (394), Expect = 1e-35
Identities = 76/89 (85%), Positives = 83/89 (93%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MAA DVE+RCFVGGLAWATDD SLE AFS++GEIL+SKIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNRRN 613
SMRDAIEGMNG+ LDGRNITVNEAQ+RR+
Sbjct: 61 SMRDAIEGMNGKELDGRNITVNEAQSRRS 89
>emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 156 bits (394), Expect = 1e-35
Identities = 76/89 (85%), Positives = 83/89 (93%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MAA DVE+RCFVGGLAWATDD SLE AFS++GEILESKIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNRRN 613
+MRDAIEGMNG+ LDGRNITVNEAQ+RR+
Sbjct: 61 AMRDAIEGMNGKELDGRNITVNEAQSRRS 89
>gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group] gi|108710320|gb|ABF98115.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group] gi|154550663|gb|ABS83497.1|
receptor-like serine threonine kinase [Oryza sativa
Japonica Group] gi|169244423|gb|ACA50485.1| glycine-rich
RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding
protein [Oryza sativa Japonica Group]
Length = 162
Score = 156 bits (394), Expect = 1e-35
Identities = 76/89 (85%), Positives = 83/89 (93%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MAA DVE+RCFVGGLAWATDD SLE AFS++GEIL+SKIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNRRN 613
SMRDAIEGMNG+ LDGRNITVNEAQ+RR+
Sbjct: 61 SMRDAIEGMNGKELDGRNITVNEAQSRRS 89
>ref|XP_006590896.1| PREDICTED: glycine-rich RNA-binding protein 7-like [Glycine max]
Length = 171
Score = 155 bits (391), Expect = 3e-35
Identities = 74/87 (85%), Positives = 82/87 (94%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MA+SDVE+RCFVGGLAWATDD +LERAFS +GEI+E+KIINDRETGRSRGFGFVTF EQ
Sbjct: 1 MASSDVEYRCFVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNR 619
SM+DAIEGMNGQ LDGRNITVNEAQ+R
Sbjct: 61 SMKDAIEGMNGQNLDGRNITVNEAQSR 87
>ref|XP_006487137.1| PREDICTED: glycine-rich RNA-binding protein-like [Citrus sinensis]
Length = 168
Score = 155 bits (391), Expect = 3e-35
Identities = 75/87 (86%), Positives = 81/87 (93%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MA+ DVEFRCFVGGLAWAT DSSL AF ++G+ILESKIINDRETGRSRGFGFVTFRDE+
Sbjct: 1 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEK 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNR 619
SMRDAIEGMNGQ LDGRNITVNEAQ+R
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQSR 87
>gb|EPS70351.1| hypothetical protein M569_04412, partial [Genlisea aurea]
Length = 104
Score = 154 bits (389), Expect = 5e-35
Identities = 72/87 (82%), Positives = 83/87 (95%)
Frame = -1
Query: 879 MAASDVEFRCFVGGLAWATDDSSLERAFSSFGEILESKIINDRETGRSRGFGFVTFRDEQ 700
MAA+DVEFRCFVGGLAWAT D SLE+AF+ +G++++SKIINDRETGRSRGFGFVTF+DEQ
Sbjct: 1 MAAADVEFRCFVGGLAWATTDQSLEQAFAQYGQVIDSKIINDRETGRSRGFGFVTFKDEQ 60
Query: 699 SMRDAIEGMNGQLLDGRNITVNEAQNR 619
SM+DAIEGMNGQ LDGRNITVNEAQ+R
Sbjct: 61 SMKDAIEGMNGQELDGRNITVNEAQSR 87