BLASTX nr result
ID: Zingiber23_contig00001030
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00001030
(382 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272768.1| PREDICTED: transcription elongation factor A... 79 5e-13
ref|XP_004138392.1| PREDICTED: transcription elongation factor A... 79 8e-13
ref|XP_006429599.1| hypothetical protein CICLE_v10011982mg [Citr... 75 9e-12
ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group] g... 74 2e-11
ref|XP_002528699.1| transcription elongation factor s-II, putati... 74 2e-11
gb|AAR01752.1| putative transcription elongation factor, 5'-part... 74 2e-11
ref|XP_002308256.2| transcription factor S-II domain-containing ... 73 3e-11
emb|CAN82941.1| hypothetical protein VITISV_013128 [Vitis vinifera] 73 3e-11
ref|XP_006650790.1| PREDICTED: transcription elongation factor S... 73 5e-11
tpg|DAA52141.1| TPA: hypothetical protein ZEAMMB73_289702 [Zea m... 73 5e-11
gb|ACF88463.1| unknown [Zea mays] 73 5e-11
ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea ma... 73 5e-11
ref|XP_004981288.1| PREDICTED: transcription elongation factor A... 72 6e-11
ref|NP_001149284.1| transcription elongation factor A protein 2 ... 70 3e-10
gb|EXB93419.1| Transcription elongation factor A protein 2 [Moru... 69 5e-10
gb|ACG32981.1| transcription elongation factor A protein 2 [Zea ... 69 7e-10
gb|EMJ21599.1| hypothetical protein PRUPE_ppa007172mg [Prunus pe... 69 9e-10
ref|XP_003563821.1| PREDICTED: transcription elongation factor A... 69 9e-10
gb|EMT19709.1| Transcription elongation factor A protein 2 [Aegi... 68 1e-09
dbj|BAJ93165.1| predicted protein [Hordeum vulgare subsp. vulgare] 67 2e-09
>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
vinifera]
Length = 367
Score = 79.3 bits (194), Expect = 5e-13
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNSKPERKETI 203
GKRLR+LTKH KIQ AS LLE WK +VI ET N KKNG L+N S K ++ + ET+
Sbjct: 57 GKRLRHLTKHPKGKIQSLASDLLEMWKKVVIDETRN-KKNGGLDNNGSAK-AEVSKTETV 114
Query: 202 KIDKAPKAGSVTIDRRNPTSESPKLNKKDADLGFKT-EISHSERNMIENNRSN 47
K++ A KAG V +++ + E+ K+ K D K +S SE +E N
Sbjct: 115 KVEMAHKAGGVKVEKASKV-ETVKIEKFDRGSSTKPGSVSRSETIKVEKRVEN 166
>ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
[Cucumis sativus]
Length = 369
Score = 78.6 bits (192), Expect = 8e-13
Identities = 43/112 (38%), Positives = 68/112 (60%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNSKPERKETI 203
GKRLR+LTKH KIQ AS L+E WK IVI+ET+ +KKNG+ +K S K P E++
Sbjct: 56 GKRLRHLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPS-AESV 114
Query: 202 KIDKAPKAGSVTIDRRNPTSESPKLNKKDADLGFKTEISHSERNMIENNRSN 47
K++K K+ S+ ++R + + + + K+E SERN ++ +++
Sbjct: 115 KVEKFQKSSSMKVERVSKVEQFDRNGATSSVKYSKSESVVSERNSVKVEKTD 166
>ref|XP_006429599.1| hypothetical protein CICLE_v10011982mg [Citrus clementina]
gi|568855218|ref|XP_006481205.1| PREDICTED:
transcription elongation factor A protein 3-like [Citrus
sinensis] gi|557531656|gb|ESR42839.1| hypothetical
protein CICLE_v10011982mg [Citrus clementina]
Length = 375
Score = 75.1 bits (183), Expect = 9e-12
Identities = 46/112 (41%), Positives = 68/112 (60%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNSKPERKETI 203
GKRLR LTKH KIQ+ AS LL+ WK IVI+ET+ +KKNGS NK S+ + + ++
Sbjct: 57 GKRLRPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGNK-SSVTTGVVKPDSG 115
Query: 202 KIDKAPKAGSVTIDRRNPTSESPKLNKKDADLGFKTEISHSERNMIENNRSN 47
KIDK K +V +++ + T+E+ K+ K + +S SE +E +N
Sbjct: 116 KIDKVQKTSAVKVEKVS-TAETVKVEKTGS-------VSRSETVKVEKKETN 159
>ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|28876018|gb|AAO60027.1| putative transcription
elongation factor [Oryza sativa Japonica Group]
gi|108711747|gb|ABF99542.1| transcription elongation
factor S-II family protein, expressed [Oryza sativa
Japonica Group] gi|113550158|dbj|BAF13601.1|
Os03g0815900 [Oryza sativa Japonica Group]
gi|125546195|gb|EAY92334.1| hypothetical protein
OsI_14059 [Oryza sativa Indica Group]
gi|125588382|gb|EAZ29046.1| hypothetical protein
OsJ_13099 [Oryza sativa Japonica Group]
Length = 367
Score = 73.9 bits (180), Expect = 2e-11
Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKN-SKPERKET 206
GKRLRYLTKH HS IQ A+ LL YWK +VI+E KKNG+ EN ST + ++ E+ +
Sbjct: 54 GKRLRYLTKHPHSDIQSMATDLLGYWKKVVIEE---GKKNGTTENVGSTNSAARAEKAQP 110
Query: 205 IKIDKAPKAGSVTIDRR--NPTSESPKLNKKDADLGFKTEISHSERNMIENNRSNKSGLH 32
+K+DK+ +GSV ++R N + P+ K + K + S+ ++ R+ K
Sbjct: 111 MKVDKSSASGSVKPEKREVNVRGQKPESIKVE-----KITNNDSKNQQVKVERAPKEATR 165
Query: 31 T 29
T
Sbjct: 166 T 166
>ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223531871|gb|EEF33688.1| transcription elongation
factor s-II, putative [Ricinus communis]
Length = 342
Score = 73.9 bits (180), Expect = 2e-11
Identities = 43/91 (47%), Positives = 60/91 (65%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNSKPERKETI 203
GKRLR LTKH KIQ AS LLE WK IVI ET+ KKNG+++NK S K ++ + ETI
Sbjct: 57 GKRLRPLTKHPREKIQTVASDLLEMWKKIVIDETTR-KKNGTVDNKSSVK-AEVSKVETI 114
Query: 202 KIDKAPKAGSVTIDRRNPTSESPKLNKKDAD 110
K++K KA +V +++ + + K+ KK +
Sbjct: 115 KVEKVQKASTVKVEKID-RERTVKVEKKSEE 144
>gb|AAR01752.1| putative transcription elongation factor, 5'-partial [Oryza sativa
Japonica Group]
Length = 315
Score = 73.9 bits (180), Expect = 2e-11
Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKN-SKPERKET 206
GKRLRYLTKH HS IQ A+ LL YWK +VI+E KKNG+ EN ST + ++ E+ +
Sbjct: 2 GKRLRYLTKHPHSDIQSMATDLLGYWKKVVIEE---GKKNGTTENVGSTNSAARAEKAQP 58
Query: 205 IKIDKAPKAGSVTIDRR--NPTSESPKLNKKDADLGFKTEISHSERNMIENNRSNKSGLH 32
+K+DK+ +GSV ++R N + P+ K + K + S+ ++ R+ K
Sbjct: 59 MKVDKSSASGSVKPEKREVNVRGQKPESIKVE-----KITNNDSKNQQVKVERAPKEATR 113
Query: 31 T 29
T
Sbjct: 114 T 114
>ref|XP_002308256.2| transcription factor S-II domain-containing family protein [Populus
trichocarpa] gi|550335948|gb|EEE91779.2| transcription
factor S-II domain-containing family protein [Populus
trichocarpa]
Length = 352
Score = 73.2 bits (178), Expect = 3e-11
Identities = 43/97 (44%), Positives = 61/97 (62%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNSKPERKETI 203
GK+LR L KH KI+ AS LLE WK +VI ET KKNGS+++K S K ++ + ET+
Sbjct: 57 GKKLRPLAKHPKEKIRAVASDLLEMWKKMVIDET--RKKNGSIDSKSSVK-AEVSKSETV 113
Query: 202 KIDKAPKAGSVTIDRRNPTSESPKLNKKDADLGFKTE 92
K++K K V +++ + TSE+ K+ K D D K E
Sbjct: 114 KVEKLRKTSVVKVEKAS-TSETVKVEKMDQDKTVKVE 149
>emb|CAN82941.1| hypothetical protein VITISV_013128 [Vitis vinifera]
Length = 326
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTK--NSKPERKE 209
GKRLR LTKH KIQ AS L++ WKNIVI+ET+ +KKNG LE+K S K + PE +
Sbjct: 65 GKRLRTLTKHPTKKIQALASDLIDIWKNIVIEETTKNKKNGDLEDKESPKPVTANPENVK 124
Query: 208 TIKIDKAPKAGSVTIDRRNPTSESPKLN 125
+ K KA ++ ++++ + P N
Sbjct: 125 ATPLLKVSKAENIKVEKQTSGVKKPSHN 152
>ref|XP_006650790.1| PREDICTED: transcription elongation factor S-II-like [Oryza
brachyantha]
Length = 367
Score = 72.8 bits (177), Expect = 5e-11
Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTK-NSKPERKET 206
GKRLRYLTKH HS IQ A+ LL +WK +VI+E KKNG+ EN STK ++ E+ +
Sbjct: 54 GKRLRYLTKHPHSDIQAMATDLLGHWKKVVIEE---GKKNGTTENDRSTKAAARAEKPQH 110
Query: 205 IKIDKAPKAGSV-----TIDRRNPTSESPKLNK 122
+K+DK +GSV +D R ES K+ K
Sbjct: 111 MKVDKNSASGSVKSEKREVDVRGQKPESIKVEK 143
>tpg|DAA52141.1| TPA: hypothetical protein ZEAMMB73_289702 [Zea mays]
Length = 318
Score = 72.8 bits (177), Expect = 5e-11
Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNS-KPERKET 206
GKRLR LTKH HS IQ AS L YWK +V++ET KKNGS EN+ S +S K E+
Sbjct: 5 GKRLRPLTKHPHSGIQAVASDLFGYWKKVVLEET--GKKNGSSENEKSMDSSGKVEKVRP 62
Query: 205 IKIDKAPKAGSVTIDRRNPTSESPKLN----KKDADLGFKTEISHSERNMIENNRSN 47
+K++K + S+ +++R+ K + +K A G +T+ ER E NR++
Sbjct: 63 MKVEKNSASASMKVEKRDVDDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTD 119
>gb|ACF88463.1| unknown [Zea mays]
Length = 376
Score = 72.8 bits (177), Expect = 5e-11
Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNS-KPERKET 206
GKRLR LTKH HS IQ AS L YWK +V++ET KKNGS EN+ S +S K E+
Sbjct: 54 GKRLRPLTKHPHSGIQAVASDLFGYWKKVVLEET--GKKNGSSENEKSMDSSGKVEKVRP 111
Query: 205 IKIDKAPKAGSVTIDRRNPTSESPKLN----KKDADLGFKTEISHSERNMIENNRSN 47
+K++K + S+ +++R+ K + +K A G +T+ ER E NR++
Sbjct: 112 MKVEKNSASASMKVEKRDVDDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTD 168
>ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea mays]
gi|194688540|gb|ACF78354.1| unknown [Zea mays]
gi|194707892|gb|ACF88030.1| unknown [Zea mays]
Length = 367
Score = 72.8 bits (177), Expect = 5e-11
Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNS-KPERKET 206
GKRLR LTKH HS IQ AS L YWK +V++ET KKNGS EN+ S +S K E+
Sbjct: 54 GKRLRPLTKHPHSGIQAVASDLFGYWKKVVLEET--GKKNGSSENEKSMDSSGKVEKVRP 111
Query: 205 IKIDKAPKAGSVTIDRRNPTSESPKLN----KKDADLGFKTEISHSERNMIENNRSN 47
+K++K + S+ +++R+ K + +K A G +T+ ER E NR++
Sbjct: 112 MKVEKNSASASMKVEKRDVDDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTD 168
>ref|XP_004981288.1| PREDICTED: transcription elongation factor A protein 3-like
[Setaria italica]
Length = 368
Score = 72.4 bits (176), Expect = 6e-11
Identities = 53/128 (41%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNS-KPERKET 206
GKRLR+LTKH HS IQ A+ L YWK +V++ET KKNGS EN+ S+ +S K E+
Sbjct: 54 GKRLRHLTKHPHSGIQAVATDLFGYWKKVVLEET--GKKNGSSENERSSDSSGKVEKARP 111
Query: 205 IKIDKAPKAGSVTIDRRNPTSESPKLNKKDADLGFKTEISHSERNMIENNRSNKSGLHTS 26
IKI+ RN +S S K+ K+D D+ K + S + +E SN S H
Sbjct: 112 IKIE------------RNSSSSSMKVEKRDGDV--KGQKPDSVK--VEKTASNGSKAHPV 155
Query: 25 ANNTERIS 2
ER+S
Sbjct: 156 --KVERVS 161
>ref|NP_001149284.1| transcription elongation factor A protein 2 [Zea mays]
gi|195626030|gb|ACG34845.1| transcription elongation
factor A protein 2 [Zea mays]
Length = 368
Score = 70.1 bits (170), Expect = 3e-10
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNS-KPERKET 206
GKRLR LTKH HS IQ A+ L YWK +V++E + KKNG EN+ S+ +S K E+ +
Sbjct: 54 GKRLRPLTKHPHSGIQAVAADLFGYWKKVVLEE--SGKKNGGSENERSSDSSGKVEKARS 111
Query: 205 IKIDKAPKAGSVTIDRRNPTSESPKLNKKDADLGFKTEISHSERNMIENNRSNKSGLHT 29
+KI+K + S+ +++R+ K N + KT + S+ ++ R +K + T
Sbjct: 112 VKIEKNSASASMKLEKRDVDVRGQKPNNAKVE---KTTSNGSKAQSVKVERVSKEVIRT 167
>gb|EXB93419.1| Transcription elongation factor A protein 2 [Morus notabilis]
Length = 358
Score = 69.3 bits (168), Expect = 5e-10
Identities = 41/87 (47%), Positives = 56/87 (64%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNSKPERKETI 203
GKRLR LTKH KIQ AS+L+E WK+IVI+ETS KNG LENK S K +P R E+
Sbjct: 54 GKRLRPLTKHPRKKIQSFASSLIEIWKDIVIKETSKDIKNGKLENKASVK-VEPPRTESP 112
Query: 202 KIDKAPKAGSVTIDRRNPTSESPKLNK 122
+ +K K + +++ +E+ K+ K
Sbjct: 113 RPEKIQKTFNGKVEKSK--AEAVKVEK 137
>gb|ACG32981.1| transcription elongation factor A protein 2 [Zea mays]
gi|223947497|gb|ACN27832.1| unknown [Zea mays]
gi|413932648|gb|AFW67199.1| transcription elongation
factor A protein 2 [Zea mays]
Length = 368
Score = 68.9 bits (167), Expect = 7e-10
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNS-KPERKET 206
GKRLR LTKH HS IQ A+ L YWK +V++E + KKNG EN+ S+ +S K E+
Sbjct: 54 GKRLRPLTKHPHSGIQAVAADLFGYWKKVVLEE--SGKKNGGSENERSSDSSGKVEKVRP 111
Query: 205 IKIDKAPKAGSVTIDRRNPTSESPKLNKKDADLGFKTEISHSERNMIENNRSNKSGLHTS 26
+KI+K N S S KL K+D D + + N ++ ++ +G
Sbjct: 112 VKIEK------------NSASASMKLEKRDVD------VRGQKPNNVKVEKTTSNGSKAQ 153
Query: 25 ANNTERIS 2
+ ER+S
Sbjct: 154 SVKVERVS 161
>gb|EMJ21599.1| hypothetical protein PRUPE_ppa007172mg [Prunus persica]
Length = 379
Score = 68.6 bits (166), Expect = 9e-10
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLENKISTKNSKPERKETI 203
GKRLR+LTKH KIQ +SAL++ WK IVI+E + KNG+LE S K + P E+
Sbjct: 54 GKRLRHLTKHPRKKIQTFSSALIDTWKGIVIKEANKDAKNGNLERIDSLKRASPS-AESP 112
Query: 202 KIDKAPKAGSVTIDRRNPTS--ESPKLN---KKDADLGFKTEISHSERNMIENNRSNKSG 38
+ +K K +V +++ + E K++ K +D + +E +ER ++N + K+
Sbjct: 113 RAEKVQKTSAVKVEKVSKAEPVEIKKVDRGVKPSSDKAYSSETVKTERK-VQNANAVKTE 171
Query: 37 LHTSANNTE 11
SA + +
Sbjct: 172 KAASAESVK 180
>ref|XP_003563821.1| PREDICTED: transcription elongation factor A protein 2-like
[Brachypodium distachyon]
Length = 364
Score = 68.6 bits (166), Expect = 9e-10
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLEN-KISTKNSKPERKET 206
GKRLRYLTKH HS IQ A+ L YWK IVI+ET KKNG+ N K+ ++ E+ ++
Sbjct: 54 GKRLRYLTKHPHSDIQAMATDLFGYWKKIVIEET--GKKNGTSANEKLDNSAARLEKSQS 111
Query: 205 IKIDKAPKAGSVTIDRRN 152
+K++K SV I++ +
Sbjct: 112 MKVEKNSSLASVKIEKND 129
>gb|EMT19709.1| Transcription elongation factor A protein 2 [Aegilops tauschii]
Length = 395
Score = 67.8 bits (164), Expect = 1e-09
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLEN-KISTKNSKPERKET 206
GKRLRYLTKH +S IQ A+ L YWK +VI+ET KKNG+ N K +K E+ +
Sbjct: 67 GKRLRYLTKHPNSDIQAVAADLFGYWKKVVIEET--GKKNGTPANGKSDNSAAKAEKPQP 124
Query: 205 IKIDKAPKAGSVTIDRRNPTSESPKLNKKDADLGFKTE 92
+KI+K V ++ +N TS + K K K E
Sbjct: 125 MKIEKNSMPAKVKVE-KNSTSATVKTEKSSMSASVKIE 161
>dbj|BAJ93165.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 67.0 bits (162), Expect = 2e-09
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = -1
Query: 382 GKRLRYLTKHHHSKIQVEASALLEYWKNIVIQETSNSKKNGSLEN-KISTKNSKPERKET 206
GKRLRYLTKH +S IQ A+ L YWK +VI+ET KKNG+ N K +K ++ +
Sbjct: 58 GKRLRYLTKHPNSDIQAMAADLFGYWKKVVIEET--GKKNGTPANGKSDNSAAKADKPQP 115
Query: 205 IKIDKAPKAGSVTIDRRNPTSESPKLNKKDADLGFKTE 92
+K++K + V I+ +N TS + K K K E
Sbjct: 116 MKVEKNSVSAKVKIE-KNSTSATVKTEKSSMSTSVKIE 152