BLASTX nr result
ID: Zanthoxylum22_contig00043591
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00043591
(340 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009166117.1| RpoC1 (chloroplast) [Zanthoxylum piperitum] ... 225 9e-57
gb|AFU96980.1| RpoC1, partial (chloroplast) [Schistostemon retusum] 221 1e-55
gb|AKZ23882.1| RNA polymerase beta subunit (plastid) [Evolvulus ... 221 2e-55
ref|YP_740466.1| RNA polymerase beta (chloroplast) [Citrus sinen... 220 3e-55
ref|YP_009059340.1| RNA polymerase beta' subunit (chloroplast) [... 219 5e-55
ref|YP_009019879.1| RNA polymerase beta (chloroplast) [Azadirach... 219 5e-55
gb|ACW03690.1| RNA polymerase beta subunit [Alternanthera ficoidea] 219 6e-55
gb|ALB78339.1| RNA polymerase beta (chloroplast) [Heuchera parvi... 218 2e-54
gb|ALD50352.1| RpoC1 (chloroplast) [Capsicum baccatum var. bacca... 218 2e-54
gb|AKZ29737.1| RNA polymerase beta (chloroplast) [Panax quinquef... 218 2e-54
gb|AKZ23897.1| RNA polymerase beta subunit (plastid) [Solanum ro... 218 2e-54
gb|AKZ23896.1| RNA polymerase beta subunit (plastid) [Solanum ca... 218 2e-54
gb|AKZ23893.1| RNA polymerase beta subunit (plastid) [Physalis h... 218 2e-54
ref|YP_009171859.1| RpoC1 (chloroplast) [Solanum nigrum] gi|8332... 218 2e-54
ref|NP_783223.2| RNA polymerase beta' subunit [Atropa belladonna... 218 2e-54
emb|CAC88035.1| RNA polymerase beta I subunit [Atropa belladonna] 218 2e-54
prf||1211235Q rpoC-like ORF 548 218 2e-54
sp|P12116.1|RPOC1_TOBAC RecName: Full=DNA-directed RNA polymeras... 218 2e-54
ref|YP_009142317.1| RNA polymerase beta (chloroplast) [Iochroma ... 218 2e-54
ref|YP_009139459.1| RNA polymerase beta (chloroplast) [Dunalia s... 218 2e-54
>ref|YP_009166117.1| RpoC1 (chloroplast) [Zanthoxylum piperitum]
gi|918056417|gb|AKZ89314.1| RpoC1 (chloroplast)
[Zanthoxylum piperitum]
Length = 677
Score = 225 bits (574), Expect = 9e-57
Identities = 113/113 (100%), Positives = 113/113 (100%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 318 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 377
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK
Sbjct: 378 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 430
>gb|AFU96980.1| RpoC1, partial (chloroplast) [Schistostemon retusum]
Length = 731
Score = 221 bits (564), Expect = 1e-55
Identities = 110/113 (97%), Positives = 112/113 (99%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRET+LGKRVDYSG
Sbjct: 357 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETMLGKRVDYSG 416
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVICGLIRQHLASNIGVAKSKIREK
Sbjct: 417 RSVIVVGPSLSLHRCGLPREIAIELFQTFVICGLIRQHLASNIGVAKSKIREK 469
>gb|AKZ23882.1| RNA polymerase beta subunit (plastid) [Evolvulus nuttallianus]
Length = 685
Score = 221 bits (562), Expect = 2e-55
Identities = 110/113 (97%), Positives = 112/113 (99%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFR+TLLGKRVDYSG
Sbjct: 326 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRKTLLGKRVDYSG 385
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVICGLIRQHLASNIGVAKSKIREK
Sbjct: 386 RSVIVVGPSLSLHRCGLPREIAIELFQTFVICGLIRQHLASNIGVAKSKIREK 438
>ref|YP_740466.1| RNA polymerase beta (chloroplast) [Citrus sinensis]
gi|122166192|sp|Q09MI7.1|RPOC1_CITSI RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gi|113952613|gb|ABI49011.1| RNA polymerase beta
(chloroplast) [Citrus sinensis]
Length = 680
Score = 220 bits (561), Expect = 3e-55
Identities = 109/113 (96%), Positives = 112/113 (99%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNK+YKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKIYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLH+CGLPREIAIELFQ+FVICGLIRQHLASNIGVAKSKIREK
Sbjct: 381 RSVIVVGPSLSLHQCGLPREIAIELFQTFVICGLIRQHLASNIGVAKSKIREK 433
>ref|YP_009059340.1| RNA polymerase beta' subunit (chloroplast) [Citrus aurantiifolia]
gi|675269885|gb|AIL50276.1| RNA polymerase beta' subunit
(chloroplast) [Citrus aurantiifolia]
Length = 680
Score = 219 bits (559), Expect = 5e-55
Identities = 108/113 (95%), Positives = 112/113 (99%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNK+YKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKIYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLH+CGLPREIA+ELFQ+FVICGLIRQHLASNIGVAKSKIREK
Sbjct: 381 RSVIVVGPSLSLHQCGLPREIALELFQTFVICGLIRQHLASNIGVAKSKIREK 433
>ref|YP_009019879.1| RNA polymerase beta (chloroplast) [Azadirachta indica]
gi|586947526|gb|AHJ91309.1| RNA polymerase beta
(chloroplast) [Azadirachta indica]
Length = 677
Score = 219 bits (559), Expect = 5e-55
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSD IEGKEGRFRETLLGKRVDYSG
Sbjct: 318 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDGIEGKEGRFRETLLGKRVDYSG 377
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVICGLIRQHLASNIGVAKSKIREK
Sbjct: 378 RSVIVVGPSLSLHRCGLPREIAIELFQTFVICGLIRQHLASNIGVAKSKIREK 430
>gb|ACW03690.1| RNA polymerase beta subunit [Alternanthera ficoidea]
Length = 247
Score = 219 bits (558), Expect = 6e-55
Identities = 109/113 (96%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 45 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 104
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVICGLIRQHLA+NIGVAK KIREK
Sbjct: 105 RSVIVVGPSLSLHRCGLPREIAIELFQTFVICGLIRQHLAANIGVAKRKIREK 157
>gb|ALB78339.1| RNA polymerase beta (chloroplast) [Heuchera parviflora var.
saurensis]
Length = 689
Score = 218 bits (554), Expect = 2e-54
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 328 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 387
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVI GLIRQHLASNIGVAKSKIREK
Sbjct: 388 RSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 440
>gb|ALD50352.1| RpoC1 (chloroplast) [Capsicum baccatum var. baccatum]
Length = 691
Score = 218 bits (554), Expect = 2e-54
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 331 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 390
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVI GLIRQHLASNIGVAKSKIREK
Sbjct: 391 RSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 443
>gb|AKZ29737.1| RNA polymerase beta (chloroplast) [Panax quinquefolius]
Length = 692
Score = 218 bits (554), Expect = 2e-54
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 331 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 390
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVI GLIRQHLASNIGVAKSKIREK
Sbjct: 391 RSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 443
>gb|AKZ23897.1| RNA polymerase beta subunit (plastid) [Solanum rostratum]
Length = 705
Score = 218 bits (554), Expect = 2e-54
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 328 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 387
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVI GLIRQHLASNIGVAKSKIREK
Sbjct: 388 RSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 440
>gb|AKZ23896.1| RNA polymerase beta subunit (plastid) [Solanum carolinense]
Length = 705
Score = 218 bits (554), Expect = 2e-54
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 328 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 387
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVI GLIRQHLASNIGVAKSKIREK
Sbjct: 388 RSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 440
>gb|AKZ23893.1| RNA polymerase beta subunit (plastid) [Physalis heterophylla]
gi|916442622|gb|AKZ23894.1| RNA polymerase beta subunit
(plastid) [Physalis virginiana]
Length = 688
Score = 218 bits (554), Expect = 2e-54
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 328 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 387
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVI GLIRQHLASNIGVAKSKIREK
Sbjct: 388 RSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 440
>ref|YP_009171859.1| RpoC1 (chloroplast) [Solanum nigrum] gi|833204738|gb|AKM21936.1|
RpoC1 (chloroplast) [Solanum nigrum]
gi|916442625|gb|AKZ23895.1| RNA polymerase beta subunit
(plastid) [Solanum triflorum]
gi|937501419|gb|ALI31131.1| RNA polymerase beta' subunit
1 (chloroplast) [Solanum nigrum]
Length = 688
Score = 218 bits (554), Expect = 2e-54
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 328 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 387
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVI GLIRQHLASNIGVAKSKIREK
Sbjct: 388 RSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 440
>ref|NP_783223.2| RNA polymerase beta' subunit [Atropa belladonna]
gi|41018086|sp|Q8S8Y0.2|RPOC1_ATRBE RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
Length = 681
Score = 218 bits (554), Expect = 2e-54
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 380
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVI GLIRQHLASNIGVAKSKIREK
Sbjct: 381 RSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 433
>emb|CAC88035.1| RNA polymerase beta I subunit [Atropa belladonna]
Length = 688
Score = 218 bits (554), Expect = 2e-54
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 328 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 387
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVI GLIRQHLASNIGVAKSKIREK
Sbjct: 388 RSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 440
>prf||1211235Q rpoC-like ORF 548
Length = 548
Score = 218 bits (554), Expect = 2e-54
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 188 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 247
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVI GLIRQHLASNIGVAKSKIREK
Sbjct: 248 RSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 300
>sp|P12116.1|RPOC1_TOBAC RecName: Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
Length = 680
Score = 218 bits (554), Expect = 2e-54
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 320 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 379
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVI GLIRQHLASNIGVAKSKIREK
Sbjct: 380 RSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 432
>ref|YP_009142317.1| RNA polymerase beta (chloroplast) [Iochroma tingoanum]
gi|820957805|gb|AKH02310.1| RNA polymerase beta
(chloroplast) [Iochroma tingoanum]
Length = 692
Score = 218 bits (554), Expect = 2e-54
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 332 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 391
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVI GLIRQHLASNIGVAKSKIREK
Sbjct: 392 RSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 444
>ref|YP_009139459.1| RNA polymerase beta (chloroplast) [Dunalia solanacea]
gi|817597843|gb|AKF78403.1| RNA polymerase beta
(chloroplast) [Dunalia solanacea]
Length = 692
Score = 218 bits (554), Expect = 2e-54
Identities = 110/113 (97%), Positives = 111/113 (98%)
Frame = -1
Query: 340 VMCQEKLVQEAVDTLLDNGISGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 161
VMCQEKLVQEAVDTLLDNGI GQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG
Sbjct: 332 VMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSG 391
Query: 160 RSVIVVGPSLSLHRCGLPREIAIELFQSFVICGLIRQHLASNIGVAKSKIREK 2
RSVIVVGPSLSLHRCGLPREIAIELFQ+FVI GLIRQHLASNIGVAKSKIREK
Sbjct: 392 RSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 444