BLASTX nr result
ID: Zanthoxylum22_contig00039960
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00039960
(394 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009166116.1| RpoC2 (chloroplast) [Zanthoxylum piperitum] ... 253 4e-65
ref|YP_009059339.1| RNA polymerase beta' subunit (chloroplast) [... 248 2e-63
ref|YP_740465.1| RNA polymerase beta'' subunit (chloroplast) [Ci... 248 2e-63
gb|AHF71465.1| DNA-directed RNA polymerase beta'' chain (chlorop... 234 1e-59
ref|YP_009106966.1| RNA polymerase beta'' subunit (chloroplast) ... 231 1e-58
ref|YP_006503599.1| RNA polymerase beta'' subunit (chloroplast) ... 231 2e-58
gb|AEX58446.1| RNA polymerase beta' subunit (chloroplast) [Theob... 231 2e-58
gb|AEX57717.1| RNA polymerase beta' subunit (chloroplast) [Theob... 231 2e-58
gb|ADO64880.2| RNA polymerase beta' subunit [Theobroma cacao] 231 2e-58
ref|YP_004021307.1| RNA polymerase beta' subunit [Theobroma caca... 231 2e-58
ref|YP_009130829.1| RNA polymerase beta' subunit (chloroplast) [... 230 4e-58
ref|YP_538925.1| RNA polymerase beta'' subunit [Gossypium hirsut... 230 4e-58
ref|YP_008992885.1| RNA polymerase beta subunit (chloroplast) [G... 230 4e-58
ref|YP_008992713.1| RNA polymerase beta subunit (chloroplast) [G... 230 4e-58
ref|YP_008992627.1| RNA polymerase beta subunit (chloroplast) [G... 230 4e-58
ref|YP_008992540.1| RNA polymerase beta subunit (chloroplast) [G... 230 4e-58
ref|YP_008992454.1| RNA polymerase beta subunit (chloroplast) [G... 230 4e-58
ref|YP_006503433.1| RNA polymerase beta'' subunit (chloroplast) ... 230 4e-58
ref|YP_006503350.1| RNA polymerase beta'' subunit (chloroplast) ... 230 4e-58
gb|AEB90503.1| RNA polymerase beta'' subunit (chloroplast) [Goss... 230 4e-58
>ref|YP_009166116.1| RpoC2 (chloroplast) [Zanthoxylum piperitum]
gi|918056416|gb|AKZ89313.1| RpoC2 (chloroplast)
[Zanthoxylum piperitum]
Length = 1399
Score = 253 bits (646), Expect = 4e-65
Identities = 130/130 (100%), Positives = 130/130 (100%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ
Sbjct: 1234 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 1293
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL
Sbjct: 1294 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 1353
Query: 32 LERQKGNLFG 3
LERQKGNLFG
Sbjct: 1354 LERQKGNLFG 1363
>ref|YP_009059339.1| RNA polymerase beta' subunit (chloroplast) [Citrus aurantiifolia]
gi|675269884|gb|AIL50275.1| RNA polymerase beta' subunit
(chloroplast) [Citrus aurantiifolia]
Length = 1403
Score = 248 bits (632), Expect = 2e-63
Identities = 127/130 (97%), Positives = 128/130 (98%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAER GRALEEVICYRAILLGITRASLNTQ
Sbjct: 1232 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERMGRALEEVICYRAILLGITRASLNTQ 1291
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHN IL
Sbjct: 1292 SFISEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNNIL 1351
Query: 32 LERQKGNLFG 3
LERQKGNLFG
Sbjct: 1352 LERQKGNLFG 1361
>ref|YP_740465.1| RNA polymerase beta'' subunit (chloroplast) [Citrus sinensis]
gi|122166193|sp|Q09MI8.1|RPOC2_CITSI RecName:
Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
gi|113952612|gb|ABI49010.1| RNA polymerase beta'' subunit
(chloroplast) [Citrus sinensis]
Length = 1403
Score = 248 bits (632), Expect = 2e-63
Identities = 127/130 (97%), Positives = 128/130 (98%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAER GRALEEVICYRAILLGITRASLNTQ
Sbjct: 1232 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERMGRALEEVICYRAILLGITRASLNTQ 1291
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHN IL
Sbjct: 1292 SFISEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNNIL 1351
Query: 32 LERQKGNLFG 3
LERQKGNLFG
Sbjct: 1352 LERQKGNLFG 1361
>gb|AHF71465.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Acer
buergerianum subsp. ningpoense]
Length = 1394
Score = 234 bits (598), Expect = 1e-59
Identities = 120/130 (92%), Positives = 124/130 (95%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEE ICYRAILLGITRASLNTQ
Sbjct: 1229 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEAICYRAILLGITRASLNTQ 1288
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IPVGTGFK LVHCSRQHN IL
Sbjct: 1289 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKALVHCSRQHNNIL 1348
Query: 32 LERQKGNLFG 3
L+ +K NLFG
Sbjct: 1349 LKTKKKNLFG 1358
>ref|YP_009106966.1| RNA polymerase beta'' subunit (chloroplast) [Sapindus mukorossi]
gi|698352361|gb|AIT96712.1| RNA polymerase beta'' subunit
(chloroplast) [Sapindus mukorossi]
Length = 1362
Score = 231 bits (590), Expect = 1e-58
Identities = 119/130 (91%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGM N+FLPGELIGLLRAERTGRALEE I YRAILLGITRASLNTQ
Sbjct: 1231 IIVRQITSKVLVSEDGMPNVFLPGELIGLLRAERTGRALEEAIRYRAILLGITRASLNTQ 1290
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IPVGTGFKGLVHCSRQHN IL
Sbjct: 1291 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHCSRQHNNIL 1350
Query: 32 LERQKGNLFG 3
LE QK LFG
Sbjct: 1351 LETQKNTLFG 1360
>ref|YP_006503599.1| RNA polymerase beta'' subunit (chloroplast) [Gossypium robinsonii]
gi|335354657|gb|AEH43273.1| RNA polymerase beta'' subunit
(chloroplast) [Gossypium robinsonii]
Length = 1395
Score = 231 bits (588), Expect = 2e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1228 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1287
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1288 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1347
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1348 LETKKNNFFG 1357
>gb|AEX58446.1| RNA polymerase beta' subunit (chloroplast) [Theobroma grandiflorum]
Length = 1391
Score = 231 bits (588), Expect = 2e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1224 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1283
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1284 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1343
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1344 LETKKNNFFG 1353
>gb|AEX57717.1| RNA polymerase beta' subunit (chloroplast) [Theobroma cacao]
gi|371926337|gb|AEX58122.1| RNA polymerase beta' subunit
(chloroplast) [Theobroma cacao]
gi|371926419|gb|AEX58203.1| RNA polymerase beta' subunit
(chloroplast) [Theobroma cacao]
gi|371926501|gb|AEX58284.1| RNA polymerase beta' subunit
(chloroplast) [Theobroma cacao]
gi|371926583|gb|AEX58365.1| RNA polymerase beta' subunit
(chloroplast) [Theobroma cacao]
Length = 1391
Score = 231 bits (588), Expect = 2e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1224 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1283
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1284 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1343
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1344 LETKKNNFFG 1353
>gb|ADO64880.2| RNA polymerase beta' subunit [Theobroma cacao]
Length = 1389
Score = 231 bits (588), Expect = 2e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1224 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1283
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1284 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1343
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1344 LETKKNNFFG 1353
>ref|YP_004021307.1| RNA polymerase beta' subunit [Theobroma cacao]
gi|309321257|gb|ADO64800.1| RNA polymerase beta' subunit
[Theobroma cacao] gi|371926009|gb|AEX57798.1| RNA
polymerase beta' subunit (chloroplast) [Theobroma cacao]
gi|371926091|gb|AEX57879.1| RNA polymerase beta' subunit
(chloroplast) [Theobroma cacao]
gi|371926173|gb|AEX57960.1| RNA polymerase beta' subunit
(chloroplast) [Theobroma cacao]
gi|371926255|gb|AEX58041.1| RNA polymerase beta' subunit
(chloroplast) [Theobroma cacao]
gi|371926747|gb|AEX58527.1| RNA polymerase beta' subunit
(chloroplast) [Theobroma cacao]
Length = 1391
Score = 231 bits (588), Expect = 2e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1224 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1283
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1284 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1343
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1344 LETKKNNFFG 1353
>ref|YP_009130829.1| RNA polymerase beta' subunit (chloroplast) [Gossypium turneri]
gi|384034854|gb|AFH57567.1| RNA polymerase beta' subunit
(chloroplast) [Gossypium turneri]
Length = 1393
Score = 230 bits (586), Expect = 4e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1226 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1285
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1286 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1345
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1346 LETKKKNFFG 1355
>ref|YP_538925.1| RNA polymerase beta'' subunit [Gossypium hirsutum]
gi|122201383|sp|Q2L8Z5.1|RPOC2_GOSHI RecName:
Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
(chloroplast) [Gossypium hirsutum]
gi|85687406|gb|ABC73618.1| RNA polymerase beta' subunit
(chloroplast) [Gossypium hirsutum]
gi|329317229|gb|AEB90586.1| RNA polymerase beta'' subunit
(chloroplast) [Gossypium hirsutum]
Length = 1393
Score = 230 bits (586), Expect = 4e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1226 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1285
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1286 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1345
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1346 LETKKKNFFG 1355
>ref|YP_008992885.1| RNA polymerase beta subunit (chloroplast) [Gossypium sturtianum]
gi|326457466|gb|ADZ74725.1| RNA polymerase beta subunit
[Gossypium sturtianum]
Length = 1393
Score = 230 bits (586), Expect = 4e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1226 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1285
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1286 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1345
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1346 LETKKKNFFG 1355
>ref|YP_008992713.1| RNA polymerase beta subunit (chloroplast) [Gossypium longicalyx]
gi|326457292|gb|ADZ74553.1| RNA polymerase beta subunit
[Gossypium longicalyx]
Length = 1393
Score = 230 bits (586), Expect = 4e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1226 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1285
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1286 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1345
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1346 LETKKKNFFG 1355
>ref|YP_008992627.1| RNA polymerase beta subunit (chloroplast) [Gossypium herbaceum]
gi|326457205|gb|ADZ74467.1| RNA polymerase beta subunit
[Gossypium herbaceum]
Length = 1393
Score = 230 bits (586), Expect = 4e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1226 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1285
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1286 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1345
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1346 LETKKKNFFG 1355
>ref|YP_008992540.1| RNA polymerase beta subunit (chloroplast) [Gossypium bickii]
gi|326457117|gb|ADZ74380.1| RNA polymerase beta subunit
[Gossypium bickii]
Length = 1393
Score = 230 bits (586), Expect = 4e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1226 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1285
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1286 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1345
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1346 LETKKKNFFG 1355
>ref|YP_008992454.1| RNA polymerase beta subunit (chloroplast) [Gossypium anomalum]
gi|326457029|gb|ADZ74293.1| RNA polymerase beta subunit
[Gossypium anomalum]
Length = 1393
Score = 230 bits (586), Expect = 4e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1226 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1285
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1286 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1345
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1346 LETKKKNFFG 1355
>ref|YP_006503433.1| RNA polymerase beta'' subunit (chloroplast) [Gossypium
capitis-viridis] gi|335354489|gb|AEH43107.1| RNA
polymerase beta'' subunit (chloroplast) [Gossypium
capitis-viridis]
Length = 1393
Score = 230 bits (586), Expect = 4e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1226 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1285
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1286 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1345
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1346 LETKKKNFFG 1355
>ref|YP_006503350.1| RNA polymerase beta'' subunit (chloroplast) [Gossypium somalense]
gi|394830878|ref|YP_006503516.1| RNA polymerase beta''
subunit (chloroplast) [Gossypium areysianum]
gi|335354405|gb|AEH43024.1| RNA polymerase beta'' subunit
(chloroplast) [Gossypium somalense]
gi|335354573|gb|AEH43190.1| RNA polymerase beta'' subunit
(chloroplast) [Gossypium areysianum]
Length = 1393
Score = 230 bits (586), Expect = 4e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1226 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1285
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1286 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1345
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1346 LETKKKNFFG 1355
>gb|AEB90503.1| RNA polymerase beta'' subunit (chloroplast) [Gossypium hirsutum]
Length = 1393
Score = 230 bits (586), Expect = 4e-58
Identities = 117/130 (90%), Positives = 122/130 (93%)
Frame = -3
Query: 392 IIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERTGRALEEVICYRAILLGITRASLNTQ 213
IIVRQITSKVLVSEDGMSN+FLPGELIGLLRAERTGRALEE ICYRA+LLGITRASLNTQ
Sbjct: 1226 IIVRQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEAICYRAVLLGITRASLNTQ 1285
Query: 212 SFIAEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNTIL 33
SFI+EASFQET RVLAKAALRGRIDWLKGLKENVVLGG+IP GTGFKGLVH SRQHN IL
Sbjct: 1286 SFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPAGTGFKGLVHRSRQHNNIL 1345
Query: 32 LERQKGNLFG 3
LE +K N FG
Sbjct: 1346 LETKKKNFFG 1355