BLASTX nr result
ID: Zanthoxylum22_contig00035888
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00035888
(578 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KDO51479.1| hypothetical protein CISIN_1g0037892mg, partial [... 300 3e-79
ref|XP_006477872.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 300 3e-79
ref|XP_006495371.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 287 3e-75
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 264 3e-68
ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 263 4e-68
ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 262 8e-68
emb|CDP05596.1| unnamed protein product [Coffea canephora] 259 7e-67
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 257 3e-66
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 257 3e-66
gb|ABO93004.1| putative RNA-dependent RNA-polymerase, partial [S... 256 7e-66
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu... 256 7e-66
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de... 256 7e-66
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola... 256 7e-66
ref|XP_002281315.1| PREDICTED: probable RNA-dependent RNA polyme... 255 1e-65
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera] 255 1e-65
ref|XP_009781107.1| PREDICTED: probable RNA-dependent RNA polyme... 255 1e-65
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu... 254 2e-65
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola... 254 2e-65
gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solan... 254 2e-65
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu... 254 2e-65
>gb|KDO51479.1| hypothetical protein CISIN_1g0037892mg, partial [Citrus sinensis]
Length = 537
Score = 300 bits (769), Expect = 3e-79
Identities = 149/185 (80%), Positives = 164/185 (88%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LG+RD+VF+ KQREGVA+LDAILTD L+AHEALEL +SGENT+VLKE+LMCGYKP+ EPF
Sbjct: 313 LGIRDHVFEKKQREGVAQLDAILTDPLKAHEALELMSSGENTNVLKELLMCGYKPDVEPF 372
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
L MLQTFRASNLLELRTRTRIF+QNGRAMMGCLDETGTLESGQVFVQ S SR E DN
Sbjct: 373 LLMMLQTFRASNLLELRTRTRIFIQNGRAMMGCLDETGTLESGQVFVQCSASRRREFLDN 432
Query: 216 SLATFSKNRSGKLNIVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGERP 37
S NRSG+L +VEG VVVAKNPCLHPGDMRVL AVDVP+L+HMVDCVVFPAKG+RP
Sbjct: 433 S----CNNRSGELGVVEGKVVVAKNPCLHPGDMRVLRAVDVPSLHHMVDCVVFPAKGKRP 488
Query: 36 HTNEC 22
HTNEC
Sbjct: 489 HTNEC 493
>ref|XP_006477872.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1082
Score = 300 bits (769), Expect = 3e-79
Identities = 149/185 (80%), Positives = 164/185 (88%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LG+RD+VF+ KQREGVA+LDAILTD L+AHEALEL +SGENT+VLKE+LMCGYKP+ EPF
Sbjct: 600 LGIRDHVFEKKQREGVAQLDAILTDPLKAHEALELMSSGENTNVLKELLMCGYKPDVEPF 659
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
L MLQTFRASNLLELRTRTRIF+QNGRAMMGCLDETGTLESGQVFVQ S SR E DN
Sbjct: 660 LLMMLQTFRASNLLELRTRTRIFIQNGRAMMGCLDETGTLESGQVFVQCSASRRREFLDN 719
Query: 216 SLATFSKNRSGKLNIVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGERP 37
S NRSG+L +VEG VVVAKNPCLHPGDMRVL AVDVP+L+HMVDCVVFPAKG+RP
Sbjct: 720 S----CNNRSGELGVVEGKVVVAKNPCLHPGDMRVLRAVDVPSLHHMVDCVVFPAKGKRP 775
Query: 36 HTNEC 22
HTNEC
Sbjct: 776 HTNEC 780
>ref|XP_006495371.1| PREDICTED: RNA-dependent RNA polymerase 1-like, partial [Citrus
sinensis]
Length = 633
Score = 287 bits (734), Expect = 3e-75
Identities = 145/179 (81%), Positives = 157/179 (87%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LG+RD VF+ KQREGVARLDAILTD L+AHEALEL +SGENT+VLKEMLMCGYKP+ EPF
Sbjct: 459 LGIRDRVFEKKQREGVARLDAILTDPLKAHEALELLSSGENTNVLKEMLMCGYKPDVEPF 518
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS ML TFRASNLLELRTRTRIF+QNGRAMMGCLDETGTLE GQVFVQ S SR E DN
Sbjct: 519 LSMMLHTFRASNLLELRTRTRIFIQNGRAMMGCLDETGTLEYGQVFVQCSASRRREFLDN 578
Query: 216 SLATFSKNRSGKLNIVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGER 40
S NRSG+L++VEG VVVAKNPCLHPGDMRVL AVDVPAL+HMVDCVVFPAKG+R
Sbjct: 579 S----CNNRSGELSVVEGKVVVAKNPCLHPGDMRVLRAVDVPALHHMVDCVVFPAKGKR 633
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 264 bits (674), Expect = 3e-68
Identities = 130/185 (70%), Positives = 155/185 (83%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV D+ F+ KQRE V +LDA+LTD LRA EALEL + GENT++LKEML+CGY+P+AEPF
Sbjct: 627 LGVPDHHFERKQREAVDQLDAMLTDPLRAQEALELMSPGENTNILKEMLLCGYQPDAEPF 686
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LLELRT+TRIF+ NGR+MMGCLDET TLE GQVFV++SGSR L D+
Sbjct: 687 LSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLEHGQVFVKFSGSRFRNLYDS 746
Query: 216 SLATFSKNRSGKLNIVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGERP 37
S FS+ G+ +++G+VVVAKNPCLHPGD+R+L AVDVPAL+HMVDCVVFP KG RP
Sbjct: 747 S-DMFSERGRGQCYLIKGSVVVAKNPCLHPGDLRILKAVDVPALHHMVDCVVFPQKGPRP 805
Query: 36 HTNEC 22
H NEC
Sbjct: 806 HPNEC 810
>ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
euphratica]
Length = 1132
Score = 263 bits (673), Expect = 4e-68
Identities = 131/185 (70%), Positives = 153/185 (82%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV D+ F+ KQRE V +LDAILTD LRA EAL L + GENT++LKEML+CGY+P+AEPF
Sbjct: 627 LGVPDHHFERKQREAVDQLDAILTDPLRAQEALVLMSPGENTNILKEMLLCGYQPDAEPF 686
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LLELRT+TRIF+ NGR MMGCLDET TLE GQVFVQ+SGSR L D+
Sbjct: 687 LSMMLQTFRASKLLELRTKTRIFIPNGRLMMGCLDETRTLEHGQVFVQFSGSRFRNLYDS 746
Query: 216 SLATFSKNRSGKLNIVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGERP 37
S FS+ G+ ++EG+VVVAKNPCLHPGD+R+L AVDVPAL+HMVDCVVFP KG RP
Sbjct: 747 S-DVFSERGRGQCYLIEGSVVVAKNPCLHPGDVRILKAVDVPALHHMVDCVVFPQKGPRP 805
Query: 36 HTNEC 22
H N+C
Sbjct: 806 HPNQC 810
>ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Populus
euphratica]
Length = 1132
Score = 262 bits (670), Expect = 8e-68
Identities = 131/185 (70%), Positives = 152/185 (82%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV D+ F+ KQRE V +LDAILTD LRA EAL L + GENT++LKEML+CGY+P+AEPF
Sbjct: 627 LGVPDHHFERKQREAVDQLDAILTDPLRAQEALVLMSPGENTNILKEMLLCGYQPDAEPF 686
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LLELRT+TRIF+ NGR MMGCLDET TLE GQVFVQ+SGSR L D+
Sbjct: 687 LSMMLQTFRASKLLELRTKTRIFIPNGRLMMGCLDETRTLEHGQVFVQFSGSRFRNLYDS 746
Query: 216 SLATFSKNRSGKLNIVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGERP 37
S FS+ G+ ++EG+VVVAKNPCLHPGD+R+L AVDVPAL+HMVDCVVFP KG RP
Sbjct: 747 S-DVFSERGRGQCYLIEGSVVVAKNPCLHPGDVRILKAVDVPALHHMVDCVVFPQKGPRP 805
Query: 36 HTNEC 22
H EC
Sbjct: 806 HPKEC 810
>emb|CDP05596.1| unnamed protein product [Coffea canephora]
Length = 1112
Score = 259 bits (662), Expect = 7e-67
Identities = 126/185 (68%), Positives = 152/185 (82%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV+D VF+ KQRE VA+LD ILTD LRA EALEL A GENT+VLKEML CGYKP++EPF
Sbjct: 617 LGVKDVVFEKKQREAVAQLDTILTDPLRAREALELMAPGENTNVLKEMLKCGYKPDSEPF 676
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LL+LRT+TRIF+ +GR+M+GCLDET TLE GQVFVQ+S + C + D+
Sbjct: 677 LSMMLQTFRASKLLDLRTKTRIFIPDGRSMIGCLDETRTLEYGQVFVQFSSAGCRQFYDD 736
Query: 216 SLATFSKNRSGKLNIVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGERP 37
S++ + I++G VVVAKNPCLHPGD+R+L AVD+P L+HMVDCVVFP KG+RP
Sbjct: 737 SISYYEHK-----TILKGTVVVAKNPCLHPGDIRILKAVDLPTLHHMVDCVVFPQKGKRP 791
Query: 36 HTNEC 22
HTNEC
Sbjct: 792 HTNEC 796
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 257 bits (657), Expect = 3e-66
Identities = 129/185 (69%), Positives = 152/185 (82%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LG+ D +F+ KQRE V +LDAILTD L+A EALEL + GENT++LKE+L+CGYKP+AEPF
Sbjct: 631 LGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPF 690
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LLELRT+TRIF+ NGR+MMGCLDET TL GQVFVQ SG+ +L
Sbjct: 691 LSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGE 750
Query: 216 SLATFSKNRSGKLNIVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGERP 37
S + FS +RS + IV+G VVVAKNPCLHPGD+RVL AV+VPAL+HMVDCVVFP KG RP
Sbjct: 751 S-SLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRP 809
Query: 36 HTNEC 22
H NEC
Sbjct: 810 HPNEC 814
>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
Length = 1115
Score = 257 bits (656), Expect = 3e-66
Identities = 130/186 (69%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV+D+V + KQ+E V +LDAIL DSL+A EALEL + GENT++LK ML CGY P+AEPF
Sbjct: 613 LGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPF 672
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LL+LRTR+RIF+ NGRAMMGCLDE+ TLE GQVFVQ++GS E S++
Sbjct: 673 LSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGSGHREFSED 732
Query: 216 SLATFSKNRSGKLN-IVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGER 40
L F+ +RS N I++GNVVVAKNPCLHPGD+RVL AVDVPAL+HMVDCVVFP KG+R
Sbjct: 733 -LHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 791
Query: 39 PHTNEC 22
PH NEC
Sbjct: 792 PHPNEC 797
>gb|ABO93004.1| putative RNA-dependent RNA-polymerase, partial [Solanum tuberosum]
Length = 841
Score = 256 bits (653), Expect = 7e-66
Identities = 129/186 (69%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV+D+V + KQ+E V +LDAIL DSL+A EALEL + GENT++LK ML CGY P+AEPF
Sbjct: 613 LGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPF 672
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LL+LRTR+RIF+ NGRAMMGCLDE+ TLE GQVFVQ++G+ E S++
Sbjct: 673 LSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSED 732
Query: 216 SLATFSKNRSGKLN-IVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGER 40
L F+ +RS N I++GNVVVAKNPCLHPGD+RVL AVDVPAL+HMVDCVVFP KG+R
Sbjct: 733 -LHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 791
Query: 39 PHTNEC 22
PH NEC
Sbjct: 792 PHPNEC 797
>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1115
Score = 256 bits (653), Expect = 7e-66
Identities = 129/186 (69%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV+D+V + KQ+E V +LDAIL DSL+A EALEL + GENT++LK ML CGY P+AEPF
Sbjct: 613 LGVKDDVLEQKQKEAVHQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPF 672
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LL+LRTR+RIF+ NGRAMMGCLDE+ TLE GQVFVQ++G+ E S++
Sbjct: 673 LSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSED 732
Query: 216 SLATFSKNRSGKLN-IVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGER 40
L F+ +RS N I++GNVVVAKNPCLHPGD+RVL AVDVPAL+HMVDCVVFP KG+R
Sbjct: 733 -LHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 791
Query: 39 PHTNEC 22
PH NEC
Sbjct: 792 PHPNEC 797
>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 1180
Score = 256 bits (653), Expect = 7e-66
Identities = 129/186 (69%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV+D+V + KQ+E V +LDAIL DSL+A EALEL + GENT++LK ML CGY P+AEPF
Sbjct: 579 LGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPF 638
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LL+LRTR+RIF+ NGRAMMGCLDE+ TLE GQVFVQ++G+ E S++
Sbjct: 639 LSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSED 698
Query: 216 SLATFSKNRSGKLN-IVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGER 40
L F+ +RS N I++GNVVVAKNPCLHPGD+RVL AVDVPAL+HMVDCVVFP KG+R
Sbjct: 699 -LHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 757
Query: 39 PHTNEC 22
PH NEC
Sbjct: 758 PHPNEC 763
>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
Length = 963
Score = 256 bits (653), Expect = 7e-66
Identities = 129/186 (69%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV+D+V + KQ+E V +LDAIL DSL+A EALEL + GENT++LK ML CGY P+AEPF
Sbjct: 461 LGVKDDVLEQKQKEAVHQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPF 520
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LL+LRTR+RIF+ NGRAMMGCLDE+ TLE GQVFVQ++G+ E S++
Sbjct: 521 LSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSED 580
Query: 216 SLATFSKNRSGKLN-IVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGER 40
L F+ +RS N I++GNVVVAKNPCLHPGD+RVL AVDVPAL+HMVDCVVFP KG+R
Sbjct: 581 -LHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 639
Query: 39 PHTNEC 22
PH NEC
Sbjct: 640 PHPNEC 645
>ref|XP_002281315.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
gi|731369199|ref|XP_010650995.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1109
Score = 255 bits (652), Expect = 1e-65
Identities = 127/185 (68%), Positives = 149/185 (80%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV+D+VF+ KQRE V +LD IL D LRA EALEL + GENT++LKEMLMCGYKP+AEPF
Sbjct: 614 LGVKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNILKEMLMCGYKPDAEPF 673
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRA+ LLELRT+TRIFV NGR+MMGCLDET TLE G+VFVQ SG+ + +
Sbjct: 674 LSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSFGD 733
Query: 216 SLATFSKNRSGKLNIVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGERP 37
SL + I+EG VVVAKNPCLHPGD+R+L+AVDVPAL+HMVDCVVFP KG RP
Sbjct: 734 SLMFYGSGSHHDNFILEGKVVVAKNPCLHPGDVRILSAVDVPALHHMVDCVVFPQKGMRP 793
Query: 36 HTNEC 22
H +EC
Sbjct: 794 HPDEC 798
>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
Length = 697
Score = 255 bits (652), Expect = 1e-65
Identities = 127/185 (68%), Positives = 149/185 (80%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV+D+VF+ KQRE V +LD IL D LRA EALEL + GENT++LKEMLMCGYKP+AEPF
Sbjct: 158 LGVKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNILKEMLMCGYKPDAEPF 217
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRA+ LLELRT+TRIFV NGR+MMGCLDET TLE G+VFVQ SG+ + +
Sbjct: 218 LSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSFGD 277
Query: 216 SLATFSKNRSGKLNIVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGERP 37
SL + I+EG VVVAKNPCLHPGD+R+L+AVDVPAL+HMVDCVVFP KG RP
Sbjct: 278 SLMFYGSGSHHDNFILEGKVVVAKNPCLHPGDVRILSAVDVPALHHMVDCVVFPQKGMRP 337
Query: 36 HTNEC 22
H +EC
Sbjct: 338 HPDEC 342
>ref|XP_009781107.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
sylvestris] gi|698458664|ref|XP_009781108.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 [Nicotiana
sylvestris] gi|698458668|ref|XP_009781109.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 [Nicotiana
sylvestris]
Length = 1116
Score = 255 bits (651), Expect = 1e-65
Identities = 130/188 (69%), Positives = 152/188 (80%), Gaps = 3/188 (1%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV+D+VF+ KQ E V +LDAIL DSL+A EALEL + GENT++LKEML CGY P+AEPF
Sbjct: 615 LGVKDDVFEQKQNEAVEQLDAILHDSLKAQEALELMSPGENTNILKEMLNCGYMPDAEPF 674
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LL+LRTR+RIF+ NGRAMMGCLDE+ TLE GQVFVQ++G+ + +
Sbjct: 675 LSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGTGRRQFYEE 734
Query: 216 SLATFSKNRSGKLN---IVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKG 46
S N SG N I+EGNVVVAKNPCLHPGD+RVL AVDVPAL+HMVDCVVFP KG
Sbjct: 735 S---HPFNDSGSTNCNFILEGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKG 791
Query: 45 ERPHTNEC 22
+RPH NEC
Sbjct: 792 KRPHPNEC 799
>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 935
Score = 254 bits (650), Expect = 2e-65
Identities = 128/186 (68%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV+D+V + KQ+E V +LDAIL DSL+A EALEL + GENT++LK ML CGY P+AEPF
Sbjct: 613 LGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPF 672
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LL+LRT++RIF+ NGRAMMGCLDE+ TLE GQVFVQ++G+ E S++
Sbjct: 673 LSMMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSED 732
Query: 216 SLATFSKNRSGKLN-IVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGER 40
L F+ +RS N I++GNVVVAKNPCLHPGD+RVL AVDVPAL+HMVDCVVFP KG+R
Sbjct: 733 -LHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 791
Query: 39 PHTNEC 22
PH NEC
Sbjct: 792 PHPNEC 797
>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
Length = 963
Score = 254 bits (650), Expect = 2e-65
Identities = 128/186 (68%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV+D+V + KQ+E V +LDAIL DSL+A EALEL + GENT++LK ML CGY P+AEPF
Sbjct: 461 LGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPF 520
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LL+LRT++RIF+ NGRAMMGCLDE+ TLE GQVFVQ++G+ E S++
Sbjct: 521 LSMMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSED 580
Query: 216 SLATFSKNRSGKLN-IVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGER 40
L F+ +RS N I++GNVVVAKNPCLHPGD+RVL AVDVPAL+HMVDCVVFP KG+R
Sbjct: 581 -LHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 639
Query: 39 PHTNEC 22
PH NEC
Sbjct: 640 PHPNEC 645
>gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solanum demissum]
Length = 1137
Score = 254 bits (650), Expect = 2e-65
Identities = 128/186 (68%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV+D+V + KQ+E V +LDAIL DSL+A EALEL + GENT++LK ML CGY P+AEPF
Sbjct: 649 LGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPF 708
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LL+LRT++RIF+ NGRAMMGCLDE+ TLE GQVFVQ++G+ E S++
Sbjct: 709 LSMMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSED 768
Query: 216 SLATFSKNRSGKLN-IVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGER 40
L F+ +RS N I++GNVVVAKNPCLHPGD+RVL AVDVPAL+HMVDCVVFP KG+R
Sbjct: 769 -LHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 827
Query: 39 PHTNEC 22
PH NEC
Sbjct: 828 PHPNEC 833
>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1065
Score = 254 bits (649), Expect = 2e-65
Identities = 127/186 (68%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Frame = -3
Query: 576 LGVRDNVFQSKQREGVARLDAILTDSLRAHEALELTASGENTDVLKEMLMCGYKPEAEPF 397
LGV+D++ + KQ+E V +LDAIL DSL+A EALEL + GENT++LK ML CGY P+AEPF
Sbjct: 612 LGVKDDILEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPF 671
Query: 396 LSTMLQTFRASNLLELRTRTRIFVQNGRAMMGCLDETGTLESGQVFVQYSGSRCSELSDN 217
LS MLQTFRAS LL+LRT++RIF+ NGRAMMGCLDE+ TLE GQVFVQ++G+ E S++
Sbjct: 672 LSMMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSED 731
Query: 216 SLATFSKNRSGKLN-IVEGNVVVAKNPCLHPGDMRVLTAVDVPALNHMVDCVVFPAKGER 40
L F+ +RS N I++GNVVVAKNPCLHPGD+RVL AVDVPAL+HMVDCVVFP KG+R
Sbjct: 732 -LHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKR 790
Query: 39 PHTNEC 22
PH NEC
Sbjct: 791 PHPNEC 796