BLASTX nr result
ID: Zanthoxylum22_contig00034741
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00034741
(604 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005644537.1| chlorophyll a/b-binding protein [Coccomyxa s... 293 4e-77
ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvo... 293 5e-77
ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volv... 293 6e-77
ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding pro... 291 1e-76
ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvo... 290 3e-76
ref|XP_011397167.1| Chlorophyll a-b binding protein 3C, chloropl... 289 7e-76
ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvo... 288 2e-75
tpg|DAA05896.1| TPA_inf: chloroplast light-harvesting complex II... 287 3e-75
ref|XP_002952625.1| hypothetical protein VOLCADRAFT_102070 [Volv... 287 3e-75
tpg|DAA05908.1| TPA_inf: chloroplast light-harvesting complex II... 287 3e-75
tpg|DAA05905.1| TPA_inf: chloroplast light-harvesting complex II... 286 8e-75
ref|XP_001765456.1| predicted protein [Physcomitrella patens] gi... 285 2e-74
tpg|DAA05903.1| TPA_inf: chloroplast light-harvesting complex II... 284 3e-74
ref|XP_001751359.1| predicted protein [Physcomitrella patens] gi... 282 9e-74
ref|XP_001761868.1| predicted protein [Physcomitrella patens] gi... 282 1e-73
ref|XP_001774812.1| predicted protein [Physcomitrella patens] gi... 281 2e-73
ref|XP_001754234.1| predicted protein [Physcomitrella patens] gi... 281 2e-73
ref|XP_001774452.1| predicted protein [Physcomitrella patens] gi... 281 2e-73
gb|AAA33636.1| major chlorophyll binding protein [Physcomitrella... 281 2e-73
ref|XP_001694115.1| chlorophyll a-b binding protein of LHCII [Ch... 281 2e-73
>ref|XP_005644537.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384246503|gb|EIE19993.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 254
Score = 293 bits (751), Expect = 4e-77
Identities = 141/194 (72%), Positives = 161/194 (82%), Gaps = 3/194 (1%)
Frame = -2
Query: 573 QRSVTTMRRTVKKAVEPASTWYGPERPRWLGPFS-GEAPPYLNGEFAGDYGWDTAGLSAD 397
+R+V++ + K+ + WYGP+RP++LGP+S G P YL GE+ GDYGWDTAGLSAD
Sbjct: 15 RRTVSSPKSKGKQVTRASIEWYGPDRPKFLGPYSDGATPSYLKGEYPGDYGWDTAGLSAD 74
Query: 396 PETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYL 217
PETFSRYREIEVIH+RWALLG LGI+TPELL KY G+KFQEA WFKAGAQIF DGLNYL
Sbjct: 75 PETFSRYREIEVIHSRWALLGTLGIVTPELLEKYGGVKFQEAVWFKAGAQIFSADGLNYL 134
Query: 216 GNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPDAF 43
GNPSLVHAQSII T+A QV+++GLAE YR NGGPAG+ LYPGG FDPLGLADDPD F
Sbjct: 135 GNPSLVHAQSIIATVATQVILLGLAEGYRVNGGPAGEITDPLYPGGAFDPLGLADDPDTF 194
Query: 42 AELKVKEIKNGHLA 1
AELKVKEIKNG LA
Sbjct: 195 AELKVKEIKNGRLA 208
>ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvox carteri f.
nagariensis] gi|300261970|gb|EFJ46179.1| hypothetical
protein VOLCADRAFT_81918 [Volvox carteri f. nagariensis]
Length = 251
Score = 293 bits (750), Expect = 5e-77
Identities = 145/200 (72%), Positives = 160/200 (80%), Gaps = 3/200 (1%)
Frame = -2
Query: 591 SSSSRGQRSVTTMRRTVKKAVEPASTWYGPERPRWLGPFS-GEAPPYLNGEFAGDYGWDT 415
S++ R VT R + A WYGP+RP++LGPFS G+ P YL GEF GDYGWDT
Sbjct: 7 SAARSSVRPVTVASRAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDT 66
Query: 414 AGLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDN 235
AGLSADPETF RYRE+E+IHARWA+LGALG +TPELLSKYAG+ F EA WFKAGAQIF
Sbjct: 67 AGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAE 126
Query: 234 DGLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLA 61
GLNYLGN +LVHAQSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLGLA
Sbjct: 127 GGLNYLGNENLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLA 186
Query: 60 DDPDAFAELKVKEIKNGHLA 1
DDPD FAELKVKEIKNG LA
Sbjct: 187 DDPDTFAELKVKEIKNGRLA 206
>ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis] gi|300263246|gb|EFJ47448.1| hypothetical
protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis]
Length = 251
Score = 293 bits (749), Expect = 6e-77
Identities = 147/205 (71%), Positives = 161/205 (78%), Gaps = 4/205 (1%)
Frame = -2
Query: 603 AKAPSSSSRGQ-RSVTTMRRTVKKAVEPASTWYGPERPRWLGPFS-GEAPPYLNGEFAGD 430
A P S+ R R T R + A WYGP+RP++LGPFS G+ P YL GEF GD
Sbjct: 2 AAIPKSAVRSSVRPATASSRAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGD 61
Query: 429 YGWDTAGLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGA 250
YGWDTAGLSADPETF RYRE+E+IHARWA+LGALG +TPELLSKYAG+ F EA WFKAGA
Sbjct: 62 YGWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGA 121
Query: 249 QIFDNDGLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFD 76
QIF GLNYLGN +LVHAQSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FD
Sbjct: 122 QIFAEGGLNYLGNENLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFD 181
Query: 75 PLGLADDPDAFAELKVKEIKNGHLA 1
PLGLADDPD FAELKVKEIKNG LA
Sbjct: 182 PLGLADDPDTFAELKVKEIKNGRLA 206
>ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
nagariensis] gi|300262048|gb|EFJ46257.1|
light-harvesting chlorophyll a/b-binding protein [Volvox
carteri f. nagariensis]
Length = 251
Score = 291 bits (746), Expect = 1e-76
Identities = 145/202 (71%), Positives = 159/202 (78%), Gaps = 3/202 (1%)
Frame = -2
Query: 597 APSSSSRGQRSVTTMRRTVKKAVEPASTWYGPERPRWLGPFS-GEAPPYLNGEFAGDYGW 421
A S+ R T R + A WYGP+RP++LGPFS G+ P YL GEF GDYGW
Sbjct: 5 AKSALRSSVRPATVASRAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGW 64
Query: 420 DTAGLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIF 241
DTAGLSADPETF RYRE+E+IHARWA+LGALG +TPELLSKYAG+ F EA WFKAGAQIF
Sbjct: 65 DTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIF 124
Query: 240 DNDGLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLG 67
GLNYLGN +LVHAQSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLG
Sbjct: 125 AEGGLNYLGNENLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLG 184
Query: 66 LADDPDAFAELKVKEIKNGHLA 1
LADDPD FAELKVKEIKNG LA
Sbjct: 185 LADDPDTFAELKVKEIKNGRLA 206
>ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvox carteri f.
nagariensis] gi|300258258|gb|EFJ42496.1| hypothetical
protein VOLCADRAFT_77072 [Volvox carteri f. nagariensis]
Length = 250
Score = 290 bits (743), Expect = 3e-76
Identities = 145/204 (71%), Positives = 159/204 (77%), Gaps = 3/204 (1%)
Frame = -2
Query: 603 AKAPSSSSRGQRSVTTMRRTVKKAVEPASTWYGPERPRWLGPFS-GEAPPYLNGEFAGDY 427
A S+ R T R + A WYGP+RP++LGPFS G+ P YL GEF GDY
Sbjct: 2 AAIAKSAVRSSVRPTVASRAARVVPRAAIEWYGPDRPKFLGPFSEGDVPSYLTGEFPGDY 61
Query: 426 GWDTAGLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQ 247
GWDTAGLSADPETF RYRE+E+IHARWA+LGALG +TPELLSKYAG+ F EA WFKAGAQ
Sbjct: 62 GWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQ 121
Query: 246 IFDNDGLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDP 73
IF GLNYLGN +LVHAQSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDP
Sbjct: 122 IFAEGGLNYLGNENLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDP 181
Query: 72 LGLADDPDAFAELKVKEIKNGHLA 1
LGLADDPD FAELKVKEIKNG LA
Sbjct: 182 LGLADDPDTFAELKVKEIKNGRLA 205
>ref|XP_011397167.1| Chlorophyll a-b binding protein 3C, chloroplastic [Auxenochlorella
protothecoides] gi|675351840|gb|KFM24280.1| Chlorophyll
a-b binding protein 3C, chloroplastic [Auxenochlorella
protothecoides]
Length = 268
Score = 289 bits (740), Expect = 7e-76
Identities = 144/205 (70%), Positives = 166/205 (80%), Gaps = 8/205 (3%)
Frame = -2
Query: 591 SSSSRGQRSVTTMRRTVKKAVEPAS--TWYGPERPRWLGPFS-GEAPPYLNGEFAGDYGW 421
+ +S G+R+VTTMRRT+K+ S WYGP+RP++LGPFS G P YLNGEFAGDYGW
Sbjct: 19 AQASTGKRAVTTMRRTLKQQKPKVSEGVWYGPDRPKFLGPFSDGITPSYLNGEFAGDYGW 78
Query: 420 DTAGLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIF 241
DTAGLSADPETF+RYR IEVIH RWA LG LGI+ PE+L KY+G++FQEA WFKAGAQIF
Sbjct: 79 DTAGLSADPETFARYRVIEVIHCRWATLGTLGIVFPEILQKYSGVQFQEAVWFKAGAQIF 138
Query: 240 DNDGLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGP----AGDPDLYPGG-YFD 76
DGLNYLGNPSLVHAQSII TLA QV++MG E YR +GGP G +LYPGG YFD
Sbjct: 139 SPDGLNYLGNPSLVHAQSIIATLAIQVLLMGAVEGYRVSGGPFDWSDGLDNLYPGGTYFD 198
Query: 75 PLGLADDPDAFAELKVKEIKNGHLA 1
PLGLADDP+ FAEL+VKE+KNG LA
Sbjct: 199 PLGLADDPETFAELRVKELKNGRLA 223
>ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
nagariensis] gi|300265820|gb|EFJ50010.1| hypothetical
protein VOLCADRAFT_80470 [Volvox carteri f. nagariensis]
Length = 252
Score = 288 bits (737), Expect = 2e-75
Identities = 141/186 (75%), Positives = 154/186 (82%), Gaps = 3/186 (1%)
Frame = -2
Query: 549 RTVKKAVEPASTWYGPERPRWLGPFS-GEAPPYLNGEFAGDYGWDTAGLSADPETFSRYR 373
R + A WYGP+RP++LGPFS G+ P YL GEF GDYGWDTAGLSADPETF RYR
Sbjct: 22 RAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYR 81
Query: 372 EIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGNPSLVHA 193
E+E+IHARWA+LGALG +TPELLSKYAG+ F EA WFKAGAQIF GLNYLGN +LVHA
Sbjct: 82 ELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLVHA 141
Query: 192 QSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPDAFAELKVKEI 19
QSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLGLADDPD FAELKVKEI
Sbjct: 142 QSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEI 201
Query: 18 KNGHLA 1
KNG LA
Sbjct: 202 KNGRLA 207
>tpg|DAA05896.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm13 [Acetabularia acetabulum]
Length = 255
Score = 287 bits (735), Expect = 3e-75
Identities = 135/193 (69%), Positives = 156/193 (80%), Gaps = 2/193 (1%)
Frame = -2
Query: 573 QRSVTTMRRTVKKAVEPASTWYGPERPRWLGPFSGEAPPYLNGEFAGDYGWDTAGLSADP 394
++ VT+MRRT KK P S WYGP+RP++LGPFSG+ P YL GEF GDYGWDTAGLSADP
Sbjct: 17 KKMVTSMRRTQKKGSAPDSVWYGPDRPQFLGPFSGDTPSYLTGEFPGDYGWDTAGLSADP 76
Query: 393 ETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLG 214
ETF RYRE+E+IHARWA+LGALG +TPE+LSKY G+ F E+ WFKAG+QIF GL+YLG
Sbjct: 77 ETFRRYRELELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYLG 136
Query: 213 NPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPDAFA 40
N +LVHAQSI+ L QVV+MG EAYR NGGP G+ LYPG FDPLGLADDPD FA
Sbjct: 137 NANLVHAQSILAILGCQVVLMGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADDPDTFA 196
Query: 39 ELKVKEIKNGHLA 1
ELK+KEIKNG LA
Sbjct: 197 ELKIKEIKNGRLA 209
>ref|XP_002952625.1| hypothetical protein VOLCADRAFT_102070 [Volvox carteri f.
nagariensis] gi|300261969|gb|EFJ46178.1| hypothetical
protein VOLCADRAFT_102070 [Volvox carteri f.
nagariensis]
Length = 270
Score = 287 bits (734), Expect = 3e-75
Identities = 139/174 (79%), Positives = 151/174 (86%), Gaps = 3/174 (1%)
Frame = -2
Query: 513 WYGPERPRWLGPFS-GEAPPYLNGEFAGDYGWDTAGLSADPETFSRYREIEVIHARWALL 337
WYGP+RP++LGPFS G+ P YL GEF GDYGWDTAGLSADPETF RYRE+E+IHARWA+L
Sbjct: 52 WYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 111
Query: 336 GALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGNPSLVHAQSIIGTLAFQVV 157
GALG +TPELLSKYAG+ F EA WFKAGAQIF GLNYLGN +LVHAQSII TLAFQVV
Sbjct: 112 GALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLVHAQSIIATLAFQVV 171
Query: 156 VMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPDAFAELKVKEIKNGHLA 1
VMGLAEAYRANGGP G+ L+PGG FDPLGLADDPD FAELKVKEIKNG LA
Sbjct: 172 VMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLA 225
>tpg|DAA05908.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm10 [Acetabularia acetabulum]
Length = 224
Score = 287 bits (734), Expect = 3e-75
Identities = 136/192 (70%), Positives = 155/192 (80%), Gaps = 2/192 (1%)
Frame = -2
Query: 570 RSVTTMRRTVKKAVEPASTWYGPERPRWLGPFSGEAPPYLNGEFAGDYGWDTAGLSADPE 391
+ VT+MRRT KK+ P S WYGPERP++LGPFSG+ P YL GEF GDYGWDTAGLSADPE
Sbjct: 18 KKVTSMRRTQKKSSAPDSVWYGPERPQFLGPFSGDCPSYLTGEFPGDYGWDTAGLSADPE 77
Query: 390 TFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGN 211
TF RYRE E+IHARWA+LGALG +TPE+L+KY G+ F E+ WFKAG+QIF GL+YLGN
Sbjct: 78 TFRRYREQELIHARWAMLGALGCVTPEILAKYGGVSFGESVWFKAGSQIFQEGGLDYLGN 137
Query: 210 PSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPDAFAE 37
SLVHAQ I+ L QV++MG EAYR NGGP G+ LYPGG FDPLGLADDPD FAE
Sbjct: 138 SSLVHAQYILAILGCQVLLMGAIEAYRVNGGPLGEGLDPLYPGGQFDPLGLADDPDTFAE 197
Query: 36 LKVKEIKNGHLA 1
LKVKEIKNG LA
Sbjct: 198 LKVKEIKNGRLA 209
>tpg|DAA05905.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm12 [Acetabularia acetabulum]
Length = 255
Score = 286 bits (731), Expect = 8e-75
Identities = 135/193 (69%), Positives = 156/193 (80%), Gaps = 2/193 (1%)
Frame = -2
Query: 573 QRSVTTMRRTVKKAVEPASTWYGPERPRWLGPFSGEAPPYLNGEFAGDYGWDTAGLSADP 394
++ VT+MRRT KK+ P S WYGP+RP++LGPFSG+ P YL GEF GDYGWDTAGLSADP
Sbjct: 17 KKMVTSMRRTQKKSSAPDSVWYGPDRPQFLGPFSGDCPSYLTGEFPGDYGWDTAGLSADP 76
Query: 393 ETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLG 214
ETF RYRE E+IHARWA+LGALG +TPE+LSKY G+ F E+ WFKAG+QIF GL+YLG
Sbjct: 77 ETFRRYREQELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYLG 136
Query: 213 NPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPDAFA 40
N +LVHAQSI+ L QVV+MG EAYR NGGP G+ LYPG FDPLGLADDPD FA
Sbjct: 137 NANLVHAQSILAILGCQVVLMGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADDPDTFA 196
Query: 39 ELKVKEIKNGHLA 1
ELK+KEIKNG LA
Sbjct: 197 ELKIKEIKNGRLA 209
>ref|XP_001765456.1| predicted protein [Physcomitrella patens]
gi|162683306|gb|EDQ69717.1| predicted protein
[Physcomitrella patens]
Length = 266
Score = 285 bits (728), Expect = 2e-74
Identities = 139/199 (69%), Positives = 158/199 (79%), Gaps = 2/199 (1%)
Frame = -2
Query: 591 SSSSRGQRSVTTMRRTVKKAVEPASTWYGPERPRWLGPFSGEAPPYLNGEFAGDYGWDTA 412
SS ++ +MR+TV K+ S WYG +RP+WLGPFSGE P YLNGEFAGDYGWDTA
Sbjct: 24 SSKVGSSQARVSMRKTVSKSSGSDSIWYGADRPKWLGPFSGETPSYLNGEFAGDYGWDTA 83
Query: 411 GLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDND 232
GLS+DPETF+R RE+EVIHARWA+LGALG LTPELL+K +G+KF EA WFKAGAQIF
Sbjct: 84 GLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK-SGVKFGEAVWFKAGAQIFSEG 142
Query: 231 GLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLAD 58
GL+YLGNPSLVHAQSI+ A QV++MG E YR GGP GD +YPGG FDPLGLAD
Sbjct: 143 GLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLAD 202
Query: 57 DPDAFAELKVKEIKNGHLA 1
DPD FAELKVKEIKNG LA
Sbjct: 203 DPDTFAELKVKEIKNGRLA 221
>tpg|DAA05903.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm11 [Acetabularia acetabulum]
Length = 224
Score = 284 bits (726), Expect = 3e-74
Identities = 134/198 (67%), Positives = 157/198 (79%), Gaps = 2/198 (1%)
Frame = -2
Query: 588 SSSRGQRSVTTMRRTVKKAVEPASTWYGPERPRWLGPFSGEAPPYLNGEFAGDYGWDTAG 409
S ++ VT+MRRT KK+ P + WYGP+RP++LGPFSG+ P YL GEF GDYGWDTAG
Sbjct: 12 SQVANKKMVTSMRRTQKKSSAPDNVWYGPDRPQFLGPFSGDCPSYLTGEFPGDYGWDTAG 71
Query: 408 LSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDG 229
LSADPETF RYRE E+IHARWA+LGALG +TPE+LSKY G+ F E+ WFKAG+QIF G
Sbjct: 72 LSADPETFRRYREQELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGG 131
Query: 228 LNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADD 55
L+YLGN +LVHAQSI+ L QV++MG EAYR NGGP G+ LYPG FDPLGLADD
Sbjct: 132 LDYLGNSNLVHAQSILAILGCQVLLMGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADD 191
Query: 54 PDAFAELKVKEIKNGHLA 1
PD FAELK+KEIKNG LA
Sbjct: 192 PDTFAELKIKEIKNGRLA 209
>ref|XP_001751359.1| predicted protein [Physcomitrella patens]
gi|162697340|gb|EDQ83676.1| predicted protein
[Physcomitrella patens]
Length = 267
Score = 282 bits (722), Expect = 9e-74
Identities = 139/191 (72%), Positives = 155/191 (81%), Gaps = 2/191 (1%)
Frame = -2
Query: 567 SVTTMRRTVKKAVEPASTWYGPERPRWLGPFSGEAPPYLNGEFAGDYGWDTAGLSADPET 388
S TMRRTV K+ S WYG +RP++LGPFSGE P YLNGEFAGDYGWDTAGLS+DPET
Sbjct: 33 SRVTMRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPET 92
Query: 387 FSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGNP 208
F+R RE+EVIHARWA+LGALG LTPELL+K +G+KF EA WFKAGAQIF GL+YLGNP
Sbjct: 93 FARNRELEVIHARWAMLGALGCLTPELLAK-SGVKFGEAVWFKAGAQIFSEGGLDYLGNP 151
Query: 207 SLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPDAFAEL 34
SLVHAQSI+ A QVV+MG E YR GGP G+ +YPGG FDPLGLADDPD FAEL
Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAEL 211
Query: 33 KVKEIKNGHLA 1
KVKEIKNG LA
Sbjct: 212 KVKEIKNGRLA 222
>ref|XP_001761868.1| predicted protein [Physcomitrella patens]
gi|168018837|ref|XP_001761952.1| predicted protein
[Physcomitrella patens]
gi|677286719|sp|P20866.2|CB2_PHYPA RecName:
Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor gi|162686923|gb|EDQ73309.1| predicted protein
[Physcomitrella patens] gi|162687007|gb|EDQ73393.1|
predicted protein [Physcomitrella patens]
Length = 267
Score = 282 bits (721), Expect = 1e-73
Identities = 138/188 (73%), Positives = 154/188 (81%), Gaps = 2/188 (1%)
Frame = -2
Query: 558 TMRRTVKKAVEPASTWYGPERPRWLGPFSGEAPPYLNGEFAGDYGWDTAGLSADPETFSR 379
TMRRTV K+ S WYG +RP++LGPFSGE P YLNGEFAGDYGWDTAGLS+DPETF+R
Sbjct: 36 TMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFAR 95
Query: 378 YREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGNPSLV 199
RE+EVIHARWA+LGALG LTPELL+K +G+KF EA WFKAGAQIF GL+YLGNPSLV
Sbjct: 96 NRELEVIHARWAMLGALGCLTPELLAK-SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 154
Query: 198 HAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPDAFAELKVK 25
HAQSI+ A QVV+MG E YR GGP G+ +YPGG FDPLGLADDPD FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVK 214
Query: 24 EIKNGHLA 1
EIKNG LA
Sbjct: 215 EIKNGRLA 222
>ref|XP_001774812.1| predicted protein [Physcomitrella patens]
gi|41529316|dbj|BAD08519.1| light-harvesting chlorophyll
a/b-binding protein 2 [Physcomitrella patens]
gi|162673836|gb|EDQ60353.1| predicted protein
[Physcomitrella patens]
Length = 267
Score = 281 bits (719), Expect = 2e-73
Identities = 140/202 (69%), Positives = 159/202 (78%), Gaps = 2/202 (0%)
Frame = -2
Query: 600 KAPSSSSRGQRSVTTMRRTVKKAVEPASTWYGPERPRWLGPFSGEAPPYLNGEFAGDYGW 421
K SS +R TMRRTV K+ S WYG +RP++LGPFSGE P YLNGEFAGDYGW
Sbjct: 27 KVGSSQAR-----VTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLNGEFAGDYGW 81
Query: 420 DTAGLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIF 241
DTAGLS+DPETF+R RE+EVIHARWA+LGALG +TPELL+K +G+KF EA WFKAGAQIF
Sbjct: 82 DTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK-SGVKFGEAVWFKAGAQIF 140
Query: 240 DNDGLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLG 67
GL+YLGNPSLVHAQSI+ A QV++MG E YR GGP G+ +YPGG FDPLG
Sbjct: 141 SEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLG 200
Query: 66 LADDPDAFAELKVKEIKNGHLA 1
LADDPD FAELKVKEIKNG LA
Sbjct: 201 LADDPDTFAELKVKEIKNGRLA 222
>ref|XP_001754234.1| predicted protein [Physcomitrella patens]
gi|41529314|dbj|BAD08518.1| light-harvesting chlorophyll
a/b-binding protein 1 [Physcomitrella patens]
gi|162694788|gb|EDQ81135.1| predicted protein
[Physcomitrella patens]
Length = 267
Score = 281 bits (719), Expect = 2e-73
Identities = 137/188 (72%), Positives = 154/188 (81%), Gaps = 2/188 (1%)
Frame = -2
Query: 558 TMRRTVKKAVEPASTWYGPERPRWLGPFSGEAPPYLNGEFAGDYGWDTAGLSADPETFSR 379
TMR+TV K+ S WYG +RP++LGPFSGE P YLNGEFAGDYGWDTAGLS+DPETF+R
Sbjct: 36 TMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFAR 95
Query: 378 YREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGNPSLV 199
RE+EVIHARWA+LGALG LTPELL+K +G+KF EA WFKAGAQIF GL+YLGNPSLV
Sbjct: 96 NRELEVIHARWAMLGALGCLTPELLAK-SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 154
Query: 198 HAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPDAFAELKVK 25
HAQSI+ A QV++MG E YR GGP GD +YPGG FDPLGLADDPD FAELKVK
Sbjct: 155 HAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVK 214
Query: 24 EIKNGHLA 1
EIKNG LA
Sbjct: 215 EIKNGRLA 222
>ref|XP_001774452.1| predicted protein [Physcomitrella patens]
gi|4757371|dbj|BAA77273.1| chlorophyll a/b-binding
protein precursor [Physcomitrella patens]
gi|162674164|gb|EDQ60676.1| predicted protein
[Physcomitrella patens]
Length = 268
Score = 281 bits (719), Expect = 2e-73
Identities = 137/188 (72%), Positives = 154/188 (81%), Gaps = 2/188 (1%)
Frame = -2
Query: 558 TMRRTVKKAVEPASTWYGPERPRWLGPFSGEAPPYLNGEFAGDYGWDTAGLSADPETFSR 379
TMR+TV K+ S WYG +RP++LGPFSGE P YLNGEFAGDYGWDTAGLS+DPETF+R
Sbjct: 37 TMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFAR 96
Query: 378 YREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGNPSLV 199
RE+EVIHARWA+LGALG LTPELL+K +G+KF EA WFKAGAQIF GL+YLGNPSLV
Sbjct: 97 NRELEVIHARWAMLGALGCLTPELLAK-SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 155
Query: 198 HAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPDAFAELKVK 25
HAQSI+ A QV++MG E YR GGP GD +YPGG FDPLGLADDPD FAELKVK
Sbjct: 156 HAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVK 215
Query: 24 EIKNGHLA 1
EIKNG LA
Sbjct: 216 EIKNGRLA 223
>gb|AAA33636.1| major chlorophyll binding protein [Physcomitrella patens]
Length = 269
Score = 281 bits (718), Expect = 2e-73
Identities = 137/188 (72%), Positives = 154/188 (81%), Gaps = 2/188 (1%)
Frame = -2
Query: 558 TMRRTVKKAVEPASTWYGPERPRWLGPFSGEAPPYLNGEFAGDYGWDTAGLSADPETFSR 379
TMRRTV K+ + WYG +RP++LGPFSGE P YLNGEFAGDYGWDTAGLS+DPETF+R
Sbjct: 37 TMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFAR 96
Query: 378 YREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDNDGLNYLGNPSLV 199
RE+EVIHARWA+LGALG LTPELL+K +G+KF EA WFKAGAQIF GL+YLGNPSLV
Sbjct: 97 NRELEVIHARWAMLGALGCLTPELLAK-SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 155
Query: 198 HAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLADDPDAFAELKVK 25
HAQSI+ A QVV+MG E YR GGP G+ +YPGG FDPLGLADDPD FAELKVK
Sbjct: 156 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVK 215
Query: 24 EIKNGHLA 1
EIKNG LA
Sbjct: 216 EIKNGRLA 223
>ref|XP_001694115.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii] gi|12658406|gb|AAK01125.1|AF330793_1
light-harvesting complex II protein precursor
[Chlamydomonas reinhardtii] gi|158277282|gb|EDP03051.1|
chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 249
Score = 281 bits (718), Expect = 2e-73
Identities = 142/199 (71%), Positives = 157/199 (78%), Gaps = 3/199 (1%)
Frame = -2
Query: 588 SSSRGQRSVTTMRRTVKKAVEPASTWYGPERPRWLGPFS-GEAPPYLNGEFAGDYGWDTA 412
SS R T R+ + A WYGP+RP++LGPFS G+ P YL GEF GDYGWDTA
Sbjct: 7 SSVRSSVRSTVSSRSARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTA 66
Query: 411 GLSADPETFSRYREIEVIHARWALLGALGILTPELLSKYAGIKFQEATWFKAGAQIFDND 232
GLSADPETF RYRE+E+IHARWA+LGALG +TPELL+K GI F EA WFKAGAQIF
Sbjct: 67 GLSADPETFKRYRELELIHARWAMLGALGCITPELLAK-NGIPFGEAVWFKAGAQIFAEG 125
Query: 231 GLNYLGNPSLVHAQSIIGTLAFQVVVMGLAEAYRANGGPAGD--PDLYPGGYFDPLGLAD 58
GLNYLGN +L+HAQSII TLAFQVVVMGLAEAYRANGGP G+ L+PGG FDPLGLAD
Sbjct: 126 GLNYLGNENLIHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLAD 185
Query: 57 DPDAFAELKVKEIKNGHLA 1
DPD FAELKVKEIKNG LA
Sbjct: 186 DPDTFAELKVKEIKNGRLA 204