BLASTX nr result
ID: Zanthoxylum22_contig00033708
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00033708
(385 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009176062.1| hypothetical chloroplast ycf1 (chloroplast) ... 77 1e-13
ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]... 76 4e-13
gb|AKJ83510.1| Ycf1 (chloroplast) [Alocasia macrorrhizos] 71 2e-10
gb|KHN05952.1| Putative membrane protein ycf1 [Glycine soja] 65 2e-09
gb|KRH72061.1| hypothetical protein GLYMA_02G189000 [Glycine max] 65 2e-09
gb|ACU18876.1| unknown [Glycine max] 65 2e-09
ref|XP_006364256.1| PREDICTED: putative membrane protein ycf1-li... 66 1e-08
gb|AFM77022.1| Ycf1, partial (chloroplast) [Amorphophallus konjac] 65 2e-08
prf||1211235CL ORF 350 65 2e-08
gb|AGS12747.1| Ycf1, partial (chloroplast) [Pera bicolor] 65 3e-08
ref|YP_009179777.1| YCF1 (chloroplast) [Isatis tinctoria] gi|943... 64 3e-08
ref|YP_009179789.1| YCF1 (chloroplast) [Isatis tinctoria] gi|943... 64 3e-08
ref|YP_009176050.1| hypothetical chloroplast ycf1 (chloroplast) ... 64 3e-08
ref|YP_009166183.1| Ycf1 (chloroplast) [Zanthoxylum piperitum] g... 64 3e-08
ref|YP_009166171.1| Ycf1 (chloroplast) [Zanthoxylum piperitum] g... 64 3e-08
ref|YP_009161978.1| Ycf1 (chloroplast) [Capsella rubella] gi|906... 64 3e-08
ref|NP_051117.1| hypothetical protein Arthcp087 [Arabidopsis tha... 64 3e-08
gb|AKD00148.1| hypothetical protein (plastid) [Brassica napus] 64 3e-08
gb|AKM97965.1| ycf1 (chloroplast) [Brassica oleracea var. capitata] 64 3e-08
ref|YP_009143611.1| hypothetical chloroplast RF1 (chloroplast) [... 64 3e-08
>ref|YP_009176062.1| hypothetical chloroplast ycf1 (chloroplast) [Ficus racemosa]
gi|937500989|gb|ALI30748.1| hypothetical chloroplast
ycf1 (chloroplast) [Ficus racemosa]
Length = 1924
Score = 77.4 bits (189), Expect(2) = 1e-13
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = -2
Query: 117 KRKKGRFVMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
++KKGRFVMIFQSFILGNLVSLCMKIINSVVVVGLYYGF
Sbjct: 23 EKKKGRFVMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 61
Score = 25.0 bits (53), Expect(2) = 1e-13
Identities = 9/14 (64%), Positives = 14/14 (100%)
Frame = -1
Query: 148 TAYDNPEIKIEKEK 107
++Y+NPEI+IEK+K
Sbjct: 13 SSYNNPEIEIEKKK 26
>ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]
gi|438687662|emb|CCP47191.1| YCF1 protein (chloroplast)
[Tectona grandis] gi|438688346|emb|CCP47280.1| YCF1
protein (chloroplast) [Tectona grandis]
gi|438688470|emb|CCP47369.1| YCF1 protein (chloroplast)
[Tectona grandis]
Length = 1898
Score = 76.3 bits (186), Expect(2) = 4e-13
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = -2
Query: 123 K*KRKKGRFVMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
K K KKGRFVMIFQSF+LGNLVSLCMKIINSVV VGLYYGF
Sbjct: 31 KKKEKKGRFVMIFQSFLLGNLVSLCMKIINSVVAVGLYYGF 71
Score = 24.6 bits (52), Expect(2) = 4e-13
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -1
Query: 148 TAYDNPEIKIEKEKRE 101
++Y+NPEI IEK+K +
Sbjct: 20 SSYNNPEIAIEKKKEK 35
>gb|AKJ83510.1| Ycf1 (chloroplast) [Alocasia macrorrhizos]
Length = 1862
Score = 71.2 bits (173), Expect(2) = 2e-10
Identities = 33/39 (84%), Positives = 38/39 (97%)
Frame = -2
Query: 117 KRKKGRFVMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
++KKGRFVMIF+SF+LGN +SLCMKIINSVVVVGLYYGF
Sbjct: 16 EKKKGRFVMIFKSFLLGNPLSLCMKIINSVVVVGLYYGF 54
Score = 20.8 bits (42), Expect(2) = 2e-10
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -1
Query: 148 TAYDNPEIKIEKEK 107
++Y+N EI IEK+K
Sbjct: 6 SSYNNREIAIEKKK 19
>gb|KHN05952.1| Putative membrane protein ycf1 [Glycine soja]
Length = 122
Score = 65.5 bits (158), Expect(2) = 2e-09
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = -2
Query: 117 KRKKGRFVMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
+++K RF MIFQSFIL NLV LCMKIINS+VVVGLYYGF
Sbjct: 30 RKEKERFEMIFQSFILDNLVFLCMKIINSIVVVGLYYGF 68
Score = 23.5 bits (49), Expect(2) = 2e-09
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 142 YDNPEIKIEKEKR 104
Y+NP+I IEKE R
Sbjct: 14 YNNPKIAIEKESR 26
>gb|KRH72061.1| hypothetical protein GLYMA_02G189000 [Glycine max]
Length = 106
Score = 65.5 bits (158), Expect(2) = 2e-09
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = -2
Query: 117 KRKKGRFVMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
+++K RF MIFQSFIL NLV LCMKIINS+VVVGLYYGF
Sbjct: 30 RKEKERFEMIFQSFILDNLVFLCMKIINSIVVVGLYYGF 68
Score = 23.5 bits (49), Expect(2) = 2e-09
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 142 YDNPEIKIEKEKR 104
Y+NP+I IEKE R
Sbjct: 14 YNNPKIAIEKESR 26
>gb|ACU18876.1| unknown [Glycine max]
Length = 299
Score = 64.7 bits (156), Expect(2) = 2e-09
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = -2
Query: 117 KRKKGRFVMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
+++K RF MIFQSFIL NLVSLCMKIINS+VVVGLYY F
Sbjct: 30 RKEKERFEMIFQSFILDNLVSLCMKIINSIVVVGLYYEF 68
Score = 23.5 bits (49), Expect(2) = 2e-09
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 142 YDNPEIKIEKEKR 104
Y+NP+I IEKE R
Sbjct: 14 YNNPKIAIEKESR 26
>ref|XP_006364256.1| PREDICTED: putative membrane protein ycf1-like [Solanum tuberosum]
Length = 452
Score = 65.9 bits (159), Expect = 1e-08
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = -2
Query: 108 KGRFVMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
+ RFV+IFQSF+LGNL SLCMKIINSVVVVGLYYGF
Sbjct: 103 RARFVIIFQSFLLGNLGSLCMKIINSVVVVGLYYGF 138
>gb|AFM77022.1| Ycf1, partial (chloroplast) [Amorphophallus konjac]
Length = 73
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/55 (54%), Positives = 44/55 (80%)
Frame = -2
Query: 165 IRTLVEQHMIIQKLK*KRKKGRFVMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
+ L ++II+++ ++K+ RFVMI + F+LGN +SLCMKI+NSVV+VGLYYGF
Sbjct: 3 VSKLSYNNLIIREIAIQKKRRRFVMILKIFLLGNPLSLCMKIMNSVVIVGLYYGF 57
>prf||1211235CL ORF 350
Length = 350
Score = 65.1 bits (157), Expect = 2e-08
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2
Query: 96 VMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
VMIFQSF+LGNLVSLCMKIINSVVVVGLYYGF
Sbjct: 1 VMIFQSFLLGNLVSLCMKIINSVVVVGLYYGF 32
>gb|AGS12747.1| Ycf1, partial (chloroplast) [Pera bicolor]
Length = 167
Score = 64.7 bits (156), Expect = 3e-08
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2
Query: 96 VMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
+MIFQSFILGNLVSLCMKIINSVVVVGLYYGF
Sbjct: 1 MMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 32
>ref|YP_009179777.1| YCF1 (chloroplast) [Isatis tinctoria] gi|943496350|gb|ALL45413.1|
YCF1 (chloroplast) [Isatis tinctoria]
Length = 344
Score = 64.3 bits (155), Expect = 3e-08
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = -2
Query: 96 VMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
+M+FQSFILGNLVSLCMKIINSVVVVGLYYGF
Sbjct: 1 MMVFQSFILGNLVSLCMKIINSVVVVGLYYGF 32
>ref|YP_009179789.1| YCF1 (chloroplast) [Isatis tinctoria] gi|943496320|gb|ALL45383.1|
YCF1 (chloroplast) [Isatis tinctoria]
Length = 1794
Score = 64.3 bits (155), Expect = 3e-08
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = -2
Query: 96 VMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
+M+FQSFILGNLVSLCMKIINSVVVVGLYYGF
Sbjct: 1 MMVFQSFILGNLVSLCMKIINSVVVVGLYYGF 32
>ref|YP_009176050.1| hypothetical chloroplast ycf1 (chloroplast) [Ficus racemosa]
gi|937500988|gb|ALI30747.1| hypothetical chloroplast
ycf1 (chloroplast) [Ficus racemosa]
Length = 357
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 93 MIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
MIFQSFILGNLVSLCMKIINSVVVVGLYYGF
Sbjct: 1 MIFQSFILGNLVSLCMKIINSVVVVGLYYGF 31
>ref|YP_009166183.1| Ycf1 (chloroplast) [Zanthoxylum piperitum]
gi|918056483|gb|AKZ89380.1| Ycf1 (chloroplast)
[Zanthoxylum piperitum]
Length = 1828
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 93 MIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
MIFQSFILGNLVSLCMKIINSVVVVGLYYGF
Sbjct: 1 MIFQSFILGNLVSLCMKIINSVVVVGLYYGF 31
>ref|YP_009166171.1| Ycf1 (chloroplast) [Zanthoxylum piperitum]
gi|918056471|gb|AKZ89368.1| Ycf1 (chloroplast)
[Zanthoxylum piperitum]
Length = 602
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 93 MIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
MIFQSFILGNLVSLCMKIINSVVVVGLYYGF
Sbjct: 1 MIFQSFILGNLVSLCMKIINSVVVVGLYYGF 31
>ref|YP_009161978.1| Ycf1 (chloroplast) [Capsella rubella] gi|906347112|gb|AKS28828.1|
Ycf1 (chloroplast) [Capsella rubella]
Length = 1789
Score = 64.3 bits (155), Expect = 3e-08
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = -2
Query: 96 VMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
+M+FQSFILGNLVSLCMKIINSVVVVGLYYGF
Sbjct: 1 MMVFQSFILGNLVSLCMKIINSVVVVGLYYGF 32
>ref|NP_051117.1| hypothetical protein Arthcp087 [Arabidopsis thaliana]
gi|6686164|sp|P56785.1|TI214_ARATH RecName:
Full=Protein TIC 214; AltName: Full=Translocon at the
inner envelope membrane of chloroplasts 214;
Short=AtTIC214 gi|5881754|dbj|BAA84445.1| ycf1
[Arabidopsis thaliana]
Length = 1786
Score = 64.3 bits (155), Expect = 3e-08
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = -2
Query: 96 VMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
+M+FQSFILGNLVSLCMKIINSVVVVGLYYGF
Sbjct: 1 MMVFQSFILGNLVSLCMKIINSVVVVGLYYGF 32
>gb|AKD00148.1| hypothetical protein (plastid) [Brassica napus]
Length = 1770
Score = 64.3 bits (155), Expect = 3e-08
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = -2
Query: 96 VMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
+M+FQSFILGNLVSLCMKIINSVVVVGLYYGF
Sbjct: 1 MMVFQSFILGNLVSLCMKIINSVVVVGLYYGF 32
>gb|AKM97965.1| ycf1 (chloroplast) [Brassica oleracea var. capitata]
Length = 343
Score = 64.3 bits (155), Expect = 3e-08
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = -2
Query: 96 VMIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
+M+FQSFILGNLVSLCMKIINSVVVVGLYYGF
Sbjct: 1 MMVFQSFILGNLVSLCMKIINSVVVVGLYYGF 32
>ref|YP_009143611.1| hypothetical chloroplast RF1 (chloroplast) [Cannabis sativa]
gi|933974980|ref|YP_009160730.1| Ycf1 (chloroplast)
[Cannabis sativa] gi|828348810|gb|AKK32264.1|
hypothetical chloroplast RF1 (chloroplast) [Cannabis
sativa] gi|873820240|gb|AKP55237.1| hypothetical
chloroplast RF1 (chloroplast) [Cannabis sativa subsp.
sativa] gi|902816341|gb|AKS11023.1| Ycf1 (chloroplast)
[Cannabis sativa] gi|915477622|gb|AKX33605.1|
hypothetical chloroplast RF19 (chloroplast) [Cannabis
sativa]
Length = 1878
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 93 MIFQSFILGNLVSLCMKIINSVVVVGLYYGF 1
MIFQSFILGNLVSLCMKIINSVVVVGLYYGF
Sbjct: 1 MIFQSFILGNLVSLCMKIINSVVVVGLYYGF 31