BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00029936
         (1156 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO48176.1| hypothetical protein CISIN_1g003573mg [Citrus sin...   503   e-139
gb|KDO48175.1| hypothetical protein CISIN_1g003573mg [Citrus sin...   503   e-139
gb|KDO48172.1| hypothetical protein CISIN_1g003573mg [Citrus sin...   503   e-139
ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron sp...   503   e-139
ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron sp...   503   e-139
ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citr...   503   e-139
ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prun...   296   2e-77
ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...   291   5e-76
ref|XP_012077525.1| PREDICTED: uncharacterized protein LOC105638...   290   2e-75
gb|KDP33843.1| hypothetical protein JCGZ_07414 [Jatropha curcas]      289   3e-75
ref|XP_008242355.1| PREDICTED: chloroplastic group IIA intron sp...   285   5e-74
ref|XP_002514120.1| conserved hypothetical protein [Ricinus comm...   284   1e-73
ref|XP_007012816.1| CRS1 / YhbY domain-containing protein, putat...   279   4e-72
ref|XP_007012815.1| CRS1 / YhbY domain-containing protein, putat...   279   4e-72
ref|XP_007012812.1| CRS1 / YhbY domain-containing protein, putat...   279   4e-72
emb|CBI27903.3| unnamed protein product [Vitis vinifera]              275   5e-71
ref|XP_012449426.1| PREDICTED: chloroplastic group IIA intron sp...   271   8e-70
gb|KJB65181.1| hypothetical protein B456_010G083500 [Gossypium r...   271   8e-70
ref|XP_012449427.1| PREDICTED: chloroplastic group IIA intron sp...   271   8e-70
gb|KHG14705.1| hypothetical protein F383_17214 [Gossypium arboreum]   267   1e-68

>gb|KDO48176.1| hypothetical protein CISIN_1g003573mg [Citrus sinensis]
          Length = 791

 Score =  503 bits (1294), Expect = e-139
 Identities = 263/383 (68%), Positives = 304/383 (79%), Gaps = 3/383 (0%)
 Frame = -1

Query: 1153 MALSAKYSPLTQPTVYSLPLKLKSESSNCLRGIRIGILCSHHTIRAQLETTRTKKKVKPS 974
            + L AKYSPLTQP V+ LPLK +S+ SN  R IRIGI  SH TI+AQL TTRTK+KVKPS
Sbjct: 5    VVLQAKYSPLTQPAVHYLPLKPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRKVKPS 64

Query: 973  FFEQIRHKWSHKVTSQREKLPWQGQEDEEEVVKNERSFGVIVTESETDVESPM-NEPVSS 797
            FFEQIRHKWSHKV S REK PWQ +E+EEE V+NE          ETDVES + +EP SS
Sbjct: 65   FFEQIRHKWSHKVISPREKFPWQEEEEEEEEVQNE---------PETDVESRVRSEPFSS 115

Query: 796  ALPNRFVSAPWVHGTDSKETTFDSHPEITTKKKENV--DGLLDYGDKIVVNSVDQDKEVV 623
            ALPNRFVSAPW+HGTDSKE  FDS     T KKE++  DGLL   +K VV+S  ++K V+
Sbjct: 116  ALPNRFVSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKTVI 175

Query: 622  EFDNIGDYNMELKLDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKGNQEVEAPN 443
            E D  GDYN ELK D+ KI ANPIEL +++  EV        GSLN+KQ+KG  EV+ P+
Sbjct: 176  ELDKEGDYNKELKTDEVKIDANPIELSKDRHREV--------GSLNQKQIKGYHEVDDPS 227

Query: 442  RLPWKRNTDGRKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEK 263
             LPWKRNTD R+RSNTELAE+M+PEHEL+RLRN+SLRMLER KVGSAGITQ+LVDSIHEK
Sbjct: 228  VLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEK 287

Query: 262  WKLDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTK 83
            WKLDEVVKLKFEEPHSLQMKRTH+ILE RTGGLVIWRSGSSVVLFRGM Y+L CVQSFTK
Sbjct: 288  WKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTK 347

Query: 82   YNQTQLSEDVTDDIMHNVGNEHP 14
            +N TQ ++DVT+++M NVG EHP
Sbjct: 348  HNHTQQTQDVTNEVMRNVG-EHP 369


>gb|KDO48175.1| hypothetical protein CISIN_1g003573mg [Citrus sinensis]
          Length = 801

 Score =  503 bits (1294), Expect = e-139
 Identities = 263/383 (68%), Positives = 304/383 (79%), Gaps = 3/383 (0%)
 Frame = -1

Query: 1153 MALSAKYSPLTQPTVYSLPLKLKSESSNCLRGIRIGILCSHHTIRAQLETTRTKKKVKPS 974
            + L AKYSPLTQP V+ LPLK +S+ SN  R IRIGI  SH TI+AQL TTRTK+KVKPS
Sbjct: 5    VVLQAKYSPLTQPAVHYLPLKPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRKVKPS 64

Query: 973  FFEQIRHKWSHKVTSQREKLPWQGQEDEEEVVKNERSFGVIVTESETDVESPM-NEPVSS 797
            FFEQIRHKWSHKV S REK PWQ +E+EEE V+NE          ETDVES + +EP SS
Sbjct: 65   FFEQIRHKWSHKVISPREKFPWQEEEEEEEEVQNE---------PETDVESRVRSEPFSS 115

Query: 796  ALPNRFVSAPWVHGTDSKETTFDSHPEITTKKKENV--DGLLDYGDKIVVNSVDQDKEVV 623
            ALPNRFVSAPW+HGTDSKE  FDS     T KKE++  DGLL   +K VV+S  ++K V+
Sbjct: 116  ALPNRFVSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKTVI 175

Query: 622  EFDNIGDYNMELKLDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKGNQEVEAPN 443
            E D  GDYN ELK D+ KI ANPIEL +++  EV        GSLN+KQ+KG  EV+ P+
Sbjct: 176  ELDKEGDYNKELKTDEVKIDANPIELSKDRHREV--------GSLNQKQIKGYHEVDDPS 227

Query: 442  RLPWKRNTDGRKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEK 263
             LPWKRNTD R+RSNTELAE+M+PEHEL+RLRN+SLRMLER KVGSAGITQ+LVDSIHEK
Sbjct: 228  VLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEK 287

Query: 262  WKLDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTK 83
            WKLDEVVKLKFEEPHSLQMKRTH+ILE RTGGLVIWRSGSSVVLFRGM Y+L CVQSFTK
Sbjct: 288  WKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTK 347

Query: 82   YNQTQLSEDVTDDIMHNVGNEHP 14
            +N TQ ++DVT+++M NVG EHP
Sbjct: 348  HNHTQQTQDVTNEVMRNVG-EHP 369


>gb|KDO48172.1| hypothetical protein CISIN_1g003573mg [Citrus sinensis]
            gi|641829043|gb|KDO48173.1| hypothetical protein
            CISIN_1g003573mg [Citrus sinensis]
            gi|641829044|gb|KDO48174.1| hypothetical protein
            CISIN_1g003573mg [Citrus sinensis]
          Length = 810

 Score =  503 bits (1294), Expect = e-139
 Identities = 263/383 (68%), Positives = 304/383 (79%), Gaps = 3/383 (0%)
 Frame = -1

Query: 1153 MALSAKYSPLTQPTVYSLPLKLKSESSNCLRGIRIGILCSHHTIRAQLETTRTKKKVKPS 974
            + L AKYSPLTQP V+ LPLK +S+ SN  R IRIGI  SH TI+AQL TTRTK+KVKPS
Sbjct: 5    VVLQAKYSPLTQPAVHYLPLKPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRKVKPS 64

Query: 973  FFEQIRHKWSHKVTSQREKLPWQGQEDEEEVVKNERSFGVIVTESETDVESPM-NEPVSS 797
            FFEQIRHKWSHKV S REK PWQ +E+EEE V+NE          ETDVES + +EP SS
Sbjct: 65   FFEQIRHKWSHKVISPREKFPWQEEEEEEEEVQNE---------PETDVESRVRSEPFSS 115

Query: 796  ALPNRFVSAPWVHGTDSKETTFDSHPEITTKKKENV--DGLLDYGDKIVVNSVDQDKEVV 623
            ALPNRFVSAPW+HGTDSKE  FDS     T KKE++  DGLL   +K VV+S  ++K V+
Sbjct: 116  ALPNRFVSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKTVI 175

Query: 622  EFDNIGDYNMELKLDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKGNQEVEAPN 443
            E D  GDYN ELK D+ KI ANPIEL +++  EV        GSLN+KQ+KG  EV+ P+
Sbjct: 176  ELDKEGDYNKELKTDEVKIDANPIELSKDRHREV--------GSLNQKQIKGYHEVDDPS 227

Query: 442  RLPWKRNTDGRKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEK 263
             LPWKRNTD R+RSNTELAE+M+PEHEL+RLRN+SLRMLER KVGSAGITQ+LVDSIHEK
Sbjct: 228  VLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEK 287

Query: 262  WKLDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTK 83
            WKLDEVVKLKFEEPHSLQMKRTH+ILE RTGGLVIWRSGSSVVLFRGM Y+L CVQSFTK
Sbjct: 288  WKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTK 347

Query: 82   YNQTQLSEDVTDDIMHNVGNEHP 14
            +N TQ ++DVT+++M NVG EHP
Sbjct: 348  HNHTQQTQDVTNEVMRNVG-EHP 369


>ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 803

 Score =  503 bits (1294), Expect = e-139
 Identities = 263/383 (68%), Positives = 304/383 (79%), Gaps = 3/383 (0%)
 Frame = -1

Query: 1153 MALSAKYSPLTQPTVYSLPLKLKSESSNCLRGIRIGILCSHHTIRAQLETTRTKKKVKPS 974
            + L AKYSPLTQP V+ LPLK +S+ SN  R IRIGI  SH TI+AQL TTRTK+KVKPS
Sbjct: 7    VVLQAKYSPLTQPAVHYLPLKPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRKVKPS 66

Query: 973  FFEQIRHKWSHKVTSQREKLPWQGQEDEEEVVKNERSFGVIVTESETDVESPM-NEPVSS 797
            FFEQIRHKWSHKV S REK PWQ +E+EEE V+NE          ETDVES + +EP SS
Sbjct: 67   FFEQIRHKWSHKVISPREKFPWQEEEEEEEEVQNE---------PETDVESRVRSEPFSS 117

Query: 796  ALPNRFVSAPWVHGTDSKETTFDSHPEITTKKKENV--DGLLDYGDKIVVNSVDQDKEVV 623
            ALPNRFVSAPW+HGTDSKE  FDS     T KKE++  DGLL   +K VV+S  ++K V+
Sbjct: 118  ALPNRFVSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKTVI 177

Query: 622  EFDNIGDYNMELKLDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKGNQEVEAPN 443
            E D  GDYN ELK D+ KI ANPIEL +++  EV        GSLN+KQ+KG  EV+ P+
Sbjct: 178  ELDKEGDYNKELKTDEVKIDANPIELSKDRHREV--------GSLNQKQIKGYHEVDDPS 229

Query: 442  RLPWKRNTDGRKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEK 263
             LPWKRNTD R+RSNTELAE+M+PEHEL+RLRN+SLRMLER KVGSAGITQ+LVDSIHEK
Sbjct: 230  VLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEK 289

Query: 262  WKLDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTK 83
            WKLDEVVKLKFEEPHSLQMKRTH+ILE RTGGLVIWRSGSSVVLFRGM Y+L CVQSFTK
Sbjct: 290  WKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTK 349

Query: 82   YNQTQLSEDVTDDIMHNVGNEHP 14
            +N TQ ++DVT+++M NVG EHP
Sbjct: 350  HNHTQQTQDVTNEVMRNVG-EHP 371


>ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568843115|ref|XP_006475467.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
            gi|568843117|ref|XP_006475468.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
            gi|568843119|ref|XP_006475469.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 812

 Score =  503 bits (1294), Expect = e-139
 Identities = 263/383 (68%), Positives = 304/383 (79%), Gaps = 3/383 (0%)
 Frame = -1

Query: 1153 MALSAKYSPLTQPTVYSLPLKLKSESSNCLRGIRIGILCSHHTIRAQLETTRTKKKVKPS 974
            + L AKYSPLTQP V+ LPLK +S+ SN  R IRIGI  SH TI+AQL TTRTK+KVKPS
Sbjct: 7    VVLQAKYSPLTQPAVHYLPLKPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRKVKPS 66

Query: 973  FFEQIRHKWSHKVTSQREKLPWQGQEDEEEVVKNERSFGVIVTESETDVESPM-NEPVSS 797
            FFEQIRHKWSHKV S REK PWQ +E+EEE V+NE          ETDVES + +EP SS
Sbjct: 67   FFEQIRHKWSHKVISPREKFPWQEEEEEEEEVQNE---------PETDVESRVRSEPFSS 117

Query: 796  ALPNRFVSAPWVHGTDSKETTFDSHPEITTKKKENV--DGLLDYGDKIVVNSVDQDKEVV 623
            ALPNRFVSAPW+HGTDSKE  FDS     T KKE++  DGLL   +K VV+S  ++K V+
Sbjct: 118  ALPNRFVSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKTVI 177

Query: 622  EFDNIGDYNMELKLDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKGNQEVEAPN 443
            E D  GDYN ELK D+ KI ANPIEL +++  EV        GSLN+KQ+KG  EV+ P+
Sbjct: 178  ELDKEGDYNKELKTDEVKIDANPIELSKDRHREV--------GSLNQKQIKGYHEVDDPS 229

Query: 442  RLPWKRNTDGRKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEK 263
             LPWKRNTD R+RSNTELAE+M+PEHEL+RLRN+SLRMLER KVGSAGITQ+LVDSIHEK
Sbjct: 230  VLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEK 289

Query: 262  WKLDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTK 83
            WKLDEVVKLKFEEPHSLQMKRTH+ILE RTGGLVIWRSGSSVVLFRGM Y+L CVQSFTK
Sbjct: 290  WKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTK 349

Query: 82   YNQTQLSEDVTDDIMHNVGNEHP 14
            +N TQ ++DVT+++M NVG EHP
Sbjct: 350  HNHTQQTQDVTNEVMRNVG-EHP 371


>ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citrus clementina]
            gi|557554714|gb|ESR64728.1| hypothetical protein
            CICLE_v10007477mg [Citrus clementina]
          Length = 810

 Score =  503 bits (1294), Expect = e-139
 Identities = 263/383 (68%), Positives = 304/383 (79%), Gaps = 3/383 (0%)
 Frame = -1

Query: 1153 MALSAKYSPLTQPTVYSLPLKLKSESSNCLRGIRIGILCSHHTIRAQLETTRTKKKVKPS 974
            + L AKYSPLTQP V+ LPLK +S+ SN  R IRIGI  SH TI+AQL TTRTK+KVKPS
Sbjct: 5    VVLQAKYSPLTQPAVHYLPLKPQSQCSNSFRSIRIGICFSHLTIQAQLGTTRTKRKVKPS 64

Query: 973  FFEQIRHKWSHKVTSQREKLPWQGQEDEEEVVKNERSFGVIVTESETDVESPM-NEPVSS 797
            FFEQIRHKWSHKV S REK PWQ +E+EEE V+NE          ETDVES + +EP SS
Sbjct: 65   FFEQIRHKWSHKVISPREKFPWQEEEEEEEEVQNE---------PETDVESRVRSEPFSS 115

Query: 796  ALPNRFVSAPWVHGTDSKETTFDSHPEITTKKKENV--DGLLDYGDKIVVNSVDQDKEVV 623
            ALPNRFVSAPW+HGTDSKE  FDS     T KKE++  DGLL   +K VV+S  ++K V+
Sbjct: 116  ALPNRFVSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKTVI 175

Query: 622  EFDNIGDYNMELKLDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKGNQEVEAPN 443
            E D  GDYN ELK D+ KI ANPIEL +++  EV        GSLN+KQ+KG  EV+ P+
Sbjct: 176  ELDKEGDYNKELKTDEVKIDANPIELSKDRHREV--------GSLNQKQIKGYHEVDDPS 227

Query: 442  RLPWKRNTDGRKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEK 263
             LPWKRNTD R+RSNTELAE+M+PEHEL+RLRN+SLRMLER KVGSAGITQ+LVDSIHEK
Sbjct: 228  VLPWKRNTDRRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEK 287

Query: 262  WKLDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTK 83
            WKLDEVVKLKFEEPHSLQMKRTH+ILE RTGGLVIWRSGSSVVLFRGM Y+L CVQSFTK
Sbjct: 288  WKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTK 347

Query: 82   YNQTQLSEDVTDDIMHNVGNEHP 14
            +N TQ ++DVT+++M NVG EHP
Sbjct: 348  HNHTQQTQDVTNEVMRNVG-EHP 369


>ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
            gi|462399326|gb|EMJ04994.1| hypothetical protein
            PRUPE_ppa001111mg [Prunus persica]
          Length = 906

 Score =  296 bits (758), Expect = 2e-77
 Identities = 171/359 (47%), Positives = 225/359 (62%), Gaps = 26/359 (7%)
 Frame = -1

Query: 1024 IRAQLETTRTKKKVKPSFFEQIRHKWSHKVTSQREKLPWQGQEDEEEVVKNERSFGVIVT 845
            I+   E TR K+K KPSFFEQI+ KWS KV S R+K PWQ Q +  +  K E        
Sbjct: 64   IKVAFEATRKKRKPKPSFFEQIQDKWSMKVNSPRDKFPWQKQNELVQEEKEE-------V 116

Query: 844  ESETDVESPMNEPVSSALPNRFVSAPWVHGTDSKETTFDSHPEITTK---KKENVDGLLD 674
            E E + E P+N+ VS +LPNR V APW HG+       DS PE +     + +N+DG   
Sbjct: 117  EEEDEEEEPVNQKVSFSLPNRIVYAPWAHGSKRITPQVDSEPETSQHSGAQGKNLDGFAG 176

Query: 673  YGDKIVVNSVDQDKEVVEFDNIGDYNMELKLDDF-KIGANPIELLRNKQTEVAR------ 515
            + +    +   ++++   F+   D N +L+ +   +IG   I + + ++  +++      
Sbjct: 177  HSEIDTTSGAVKNEK--SFERRFDSNRKLERERVGEIGIISIGVSKKEEKMISKGLNGIS 234

Query: 514  --EVIPSLGSLNEKQLKGNQEVEAPNRLPWKRNTD---------GRKRSNTELAERMVPE 368
              E +   G  +EK            RLPWKR ++          ++RSNTELAERM+P+
Sbjct: 235  LNETLSGDGENDEKVENFVYSGSGSIRLPWKRESELSSEEGDKTRKRRSNTELAERMLPD 294

Query: 367  HELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHKI 188
            HELRRLRNVSLRMLERIKVG  GITQ+LV++IHEKWK+DEVVKLKFEEP SL MKRTH+I
Sbjct: 295  HELRRLRNVSLRMLERIKVGVTGITQALVNTIHEKWKIDEVVKLKFEEPFSLNMKRTHEI 354

Query: 187  LESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTKYNQT-----QLSEDVTDDIMHNVG 26
            LES+TGGLVIWRSGSSVVL+RGMTY L CVQ++ K++QT     Q SE+ T D MHNVG
Sbjct: 355  LESKTGGLVIWRSGSSVVLYRGMTYNLPCVQTYAKHSQTNSHMLQHSENATSDSMHNVG 413


>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Vitis vinifera]
          Length = 884

 Score =  291 bits (746), Expect = 5e-76
 Identities = 173/387 (44%), Positives = 240/387 (62%), Gaps = 28/387 (7%)
 Frame = -1

Query: 1102 LPLKLKSESSNCLRGIRIGILCSHHTIRAQ-------LETTRTKKKVKPSFFEQIRHKWS 944
            L L+ ++  SN  R ++    CS+H+I+         L+TT+ K+K +PSFFEQIR KWS
Sbjct: 14   LLLQPQAHYSNTFRTLKFNCSCSYHSIQVDTQQVKVPLKTTKAKRKPRPSFFEQIRDKWS 73

Query: 943  HKVTSQREKLPWQGQEDEEEVVKNERSFGVIVTESETDVESPMNEPVSSALPNRFVSAPW 764
             K+ S REK PWQ Q +E      + S GV+V +SE  ++S +  PVSSA  +RFVS P 
Sbjct: 74   LKINSPREKFPWQEQAEE-----TQNSSGVVVPDSEV-IDSSVGSPVSSASESRFVSVPC 127

Query: 763  VHGTDSKETTFDSHPEITTKKKENVDGLLDYGDKIVVNSVDQDKEVVEFDNIGDYNMELK 584
            +H +  +     S PEI+    E    ++ +G      SVD+  +   F    D + + +
Sbjct: 128  IHESKPRNPRLVSEPEISQNSCEQGVNVVGFGSHRA--SVDEWSK--SFQKEVDSDGKFE 183

Query: 583  LDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKGNQEV---------EAPNRLPW 431
             +  ++   PI +L  ++TE+  E+  +  SLNEK   G+++           +   LPW
Sbjct: 184  GEGVEVDEIPIGVLGTEKTEI--EMGDANVSLNEKPPGGDEDFGNFEGFSGNSSLIELPW 241

Query: 430  KRNT-------DGRKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSI 272
            KR         DG  R NT +AERMVPEHELRRL+N++LRMLERIKVG+AG+TQSLVD+I
Sbjct: 242  KRREGLQPVERDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAI 301

Query: 271  HEKWKLDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQS 92
            HEKW+ DEVVKLKFE P S  MKRTH+ILE+RTGGLVIWR+GSSVVL+RGM Y+LHCVQS
Sbjct: 302  HEKWRKDEVVKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMAYKLHCVQS 361

Query: 91   FTK-----YNQTQLSEDVTDDIMHNVG 26
            + K      N ++ S+D  + I+ ++G
Sbjct: 362  YIKQERDNVNISEYSQDAANVIIQDIG 388


>ref|XP_012077525.1| PREDICTED: uncharacterized protein LOC105638343 [Jatropha curcas]
          Length = 1149

 Score =  290 bits (741), Expect = 2e-75
 Identities = 182/406 (44%), Positives = 242/406 (59%), Gaps = 29/406 (7%)
 Frame = -1

Query: 1156 AMALSAKYSPLTQPTVYSLPLKLKSESSNCLRGIRIGILC-SHHTIRAQLETTRTKKKVK 980
            AMAL   + P +   VY  PL L++++ +  +  +    C S  +I  ++    T +K K
Sbjct: 275  AMAL---FLPTSNSCVY--PLSLQTQNHSPFKTFKFETYCRSGRSI--EVSAANTTRKNK 327

Query: 979  PSFFEQIRHKWSHKVTSQREKLPW-------QGQEDEEEVVKNERSFGVIVTESETDVE- 824
            PSFFEQIR KWS K+ S+REK PW       Q ++DEEE +    S GV+++E ETD   
Sbjct: 328  PSFFEQIRDKWSVKIPSRREKFPWEELKHQQQQEQDEEEEIDTRESSGVVLSEGETDASP 387

Query: 823  SPMNEPVSSALPNRFVSAPWVHGTDSKETTFDSHPEITTKKKENVDGLLDYGDK------ 662
            S   +PVS  +P+R ++AP +H T  K     S P    K  EN+DG+LD   +      
Sbjct: 388  SVSRDPVSYTVPSRSITAPSIHRTLPKRNHLSSQP----KDGENLDGILDEVREEDNVLH 443

Query: 661  IVVNSVDQDKEVVEFDNIGDYNMELKLDDFKIGANPIELLRNKQTEVAREVIPSLGSLNE 482
            +VV++V+   + V      DYN + +    K  A  +EL R+K    A++    L S  +
Sbjct: 444  VVVDNVESSGKKV------DYNHKFERKKVKFNAVSVELTRDKVIARAKDSNDVLSSNKK 497

Query: 481  KQLKGNQ-EVEAPNRLPWKRNTD--------GRKRSNTELAERMVPEHELRRLRNVSLRM 329
              L+ +Q +  + N LPW+R  +         R R NTELAERM+PEHEL+RLRN +LRM
Sbjct: 498  GNLQVSQHDNSSSNGLPWEREREVESSEGDWRRNRINTELAERMLPEHELKRLRNNALRM 557

Query: 328  LERIKVGSAGITQSLVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRS 149
             ERIKVG+AGI Q LVD+IHE W+L EVVKLKFE P S  MKRTH+ILESRTGGLVIWRS
Sbjct: 558  FERIKVGAAGINQDLVDAIHENWRLSEVVKLKFEWPLSCNMKRTHEILESRTGGLVIWRS 617

Query: 148  GSSVVLFRGMTYRLHCVQSFTKYNQT-----QLSEDVTDDIMHNVG 26
            GSSVVL+RGMTY   CVQS++K N+         E VT +  HNVG
Sbjct: 618  GSSVVLYRGMTYNFQCVQSYSKQNEAGNDIFSHPEKVTSNATHNVG 663



 Score =  119 bits (299), Expect = 4e-24
 Identities = 86/258 (33%), Positives = 134/258 (51%), Gaps = 16/258 (6%)
 Frame = -1

Query: 1141 AKYSPLTQPTVYSLPLKLKSESSNCLRGIRIGILC-SHHTIRAQLETTRTKKKVKPSFFE 965
            A + P +   VY  PL L++++ +  +  +    C S  +I  ++    T +K KPSFFE
Sbjct: 2    ALFLPTSNSCVY--PLSLQTQNHSPFKTFKFETYCRSGRSI--EVSAANTTRKNKPSFFE 57

Query: 964  QIRHKWSHKVTSQREKLPW-------QGQEDEEEVVKNERSFGVIVTESETDVE-SPMNE 809
            QIR KWS K+ S+REK PW       Q ++DEEE +    S GV+++E ETD   S   +
Sbjct: 58   QIRDKWSVKIPSRREKFPWEELKHQQQQEQDEEEEIDTRESSGVVLSEGETDASPSVSRD 117

Query: 808  PVSSALPNRFVSAPWVHGTDSKETTFDSHPEITTKKKENVDGLLDYGDK------IVVNS 647
            PVS  +P+R ++AP +H T  K     S P    K  EN+DG+LD   +      +VV++
Sbjct: 118  PVSYTVPSRSITAPSIHRTLPKRNHLSSQP----KDGENLDGILDEVREEDNVLHVVVDN 173

Query: 646  VDQDKEVVEFDNIGDYNMELKLDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKG 467
            V+   + V      DYN + +    K  A  +EL R+K    A++    L S  +  L+ 
Sbjct: 174  VESSGKKV------DYNHKFERKKVKFNAVSVELTRDKVIARAKDSNDVLSSNKKGNLQV 227

Query: 466  NQ-EVEAPNRLPWKRNTD 416
            +Q +  + N LPW+R  +
Sbjct: 228  SQHDNSSSNGLPWERERE 245


>gb|KDP33843.1| hypothetical protein JCGZ_07414 [Jatropha curcas]
          Length = 874

 Score =  289 bits (740), Expect = 3e-75
 Identities = 179/401 (44%), Positives = 239/401 (59%), Gaps = 29/401 (7%)
 Frame = -1

Query: 1141 AKYSPLTQPTVYSLPLKLKSESSNCLRGIRIGILC-SHHTIRAQLETTRTKKKVKPSFFE 965
            A + P +   VY  PL L++++ +  +  +    C S  +I  ++    T +K KPSFFE
Sbjct: 2    ALFLPTSNSCVY--PLSLQTQNHSPFKTFKFETYCRSGRSI--EVSAANTTRKNKPSFFE 57

Query: 964  QIRHKWSHKVTSQREKLPW-------QGQEDEEEVVKNERSFGVIVTESETDVE-SPMNE 809
            QIR KWS K+ S+REK PW       Q ++DEEE +    S GV+++E ETD   S   +
Sbjct: 58   QIRDKWSVKIPSRREKFPWEELKHQQQQEQDEEEEIDTRESSGVVLSEGETDASPSVSRD 117

Query: 808  PVSSALPNRFVSAPWVHGTDSKETTFDSHPEITTKKKENVDGLLDYGDK------IVVNS 647
            PVS  +P+R ++AP +H T  K     S P    K  EN+DG+LD   +      +VV++
Sbjct: 118  PVSYTVPSRSITAPSIHRTLPKRNHLSSQP----KDGENLDGILDEVREEDNVLHVVVDN 173

Query: 646  VDQDKEVVEFDNIGDYNMELKLDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKG 467
            V+   + V      DYN + +    K  A  +EL R+K    A++    L S  +  L+ 
Sbjct: 174  VESSGKKV------DYNHKFERKKVKFNAVSVELTRDKVIARAKDSNDVLSSNKKGNLQV 227

Query: 466  NQ-EVEAPNRLPWKRNTD--------GRKRSNTELAERMVPEHELRRLRNVSLRMLERIK 314
            +Q +  + N LPW+R  +         R R NTELAERM+PEHEL+RLRN +LRM ERIK
Sbjct: 228  SQHDNSSSNGLPWEREREVESSEGDWRRNRINTELAERMLPEHELKRLRNNALRMFERIK 287

Query: 313  VGSAGITQSLVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVV 134
            VG+AGI Q LVD+IHE W+L EVVKLKFE P S  MKRTH+ILESRTGGLVIWRSGSSVV
Sbjct: 288  VGAAGINQDLVDAIHENWRLSEVVKLKFEWPLSCNMKRTHEILESRTGGLVIWRSGSSVV 347

Query: 133  LFRGMTYRLHCVQSFTKYNQT-----QLSEDVTDDIMHNVG 26
            L+RGMTY   CVQS++K N+         E VT +  HNVG
Sbjct: 348  LYRGMTYNFQCVQSYSKQNEAGNDIFSHPEKVTSNATHNVG 388


>ref|XP_008242355.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Prunus mume]
            gi|645274471|ref|XP_008242356.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Prunus mume]
          Length = 930

 Score =  285 bits (729), Expect = 5e-74
 Identities = 172/376 (45%), Positives = 229/376 (60%), Gaps = 43/376 (11%)
 Frame = -1

Query: 1024 IRAQLETTRTKKKVKPSFFEQIRHKWSHKVTSQREKLPWQGQ-----EDEEEVVKN---- 872
            I+   E TR K+K KPSFF QI+ KWS KV S R+K PWQ Q     E++EEV ++    
Sbjct: 64   IKVAFEATRKKRKPKPSFFVQIQDKWSMKVNSPRDKFPWQKQNELVQEEKEEVEEDDEEE 123

Query: 871  -ERSFGVIVTESETD-------VESPMNEPVSSALPNRFVSAPWVHGTDSKETTFDSHPE 716
             E  F   +++ E         V  P+N+ VS +LPNR + APW HG+       DS PE
Sbjct: 124  EEEVFEPKISKQEEGQKCYGERVAEPVNQKVSFSLPNRIIYAPWAHGSKRITPQVDSEPE 183

Query: 715  ITTK---KKENVDGLLDYGDKIVVNSVDQDKEVVEFDNIGDYNMELKLDDF-KIGANPIE 548
             +     + +N+DG   + +  +  +    K+   F+   D N +L+ +   ++G   I 
Sbjct: 184  TSQHSGAQGKNLDGFAGHSE--IDTTSGAVKKEKSFERRFDSNRKLERERAGEVGIISIG 241

Query: 547  LLRNKQTEVAR--------EVIPSLGSLNEKQLKGNQEVEAPNRLPWKRNTD-------- 416
            + + ++  +++        E +   G  +EK            RLPWKR ++        
Sbjct: 242  VSKKEEKMISKGLNGVSLDETLSGDGENDEKVENFVYSGSGSIRLPWKRESELSSEEGDK 301

Query: 415  -GRKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEKWKLDEVVK 239
              ++RSNTELAERM+P+HELRRLRNVSLRMLERIKVG  GITQ+LV++IHEKWK+DEVVK
Sbjct: 302  TRKRRSNTELAERMLPDHELRRLRNVSLRMLERIKVGVTGITQALVNTIHEKWKIDEVVK 361

Query: 238  LKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTKYNQT---- 71
            LKFEEP SL MKRTH+ILES+TGGLVIWRSGSSVVL+RGMTY L CVQ++ K +QT    
Sbjct: 362  LKFEEPFSLNMKRTHEILESKTGGLVIWRSGSSVVLYRGMTYNLPCVQTYAKQSQTNSHM 421

Query: 70   -QLSEDVTDDIMHNVG 26
             Q SE+ T D MHNVG
Sbjct: 422  MQHSENATSDSMHNVG 437


>ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
            gi|223546576|gb|EEF48074.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 930

 Score =  284 bits (726), Expect = 1e-73
 Identities = 178/425 (41%), Positives = 249/425 (58%), Gaps = 46/425 (10%)
 Frame = -1

Query: 1153 MALSAKYSPLTQPTVYSLPLKLKSESSNCLRGIRIGILCSHHTIRAQLETTRTKKKVKPS 974
            MAL+   S  +  + Y  PL L++ S +  +       CS+     Q+  T+TK+K +PS
Sbjct: 30   MALTLSTSSSSSSSRY--PLFLQARSHSPFKAFNFETNCSYSR-SIQVSATKTKRKPRPS 86

Query: 973  FFEQIRHKWSHKVTSQREKLPWQ-----------GQEDEEEVVKNERSFGVIVTESETDV 827
            FFEQIR KWS KV S R+  PWQ           G+ DEEE+ + E S GV ++++E D 
Sbjct: 87   FFEQIRDKWSLKVPSTRDTFPWQEPEQQQEHQGQGKNDEEEIERCEIS-GVTLSKAEIDA 145

Query: 826  E--SPMNEPVSSALPNRFVSAPWVHGTDSKETTFDSHPEITTKKKEN-VDGLLDYGDKIV 656
               S  ++ VS +LPN   +APWVHGT  K+  F S P+I     +N V  ++D  + + 
Sbjct: 146  NPSSIDDDSVSVSLPNHLTTAPWVHGTRPKKNHFSSRPKIGENVVQNDVHTVVDIVENLE 205

Query: 655  VNSVDQDK-----EVVEFDN----IGDYNMELKLDDFKIGANPIELLRNKQTEVAR-EVI 506
                  DK      ++  DN    + + N + K  + K+      +   +  E+AR +  
Sbjct: 206  KEVTCNDKFKKEDNILHVDNAERLVKEVNYDKKFKEAKVQVGGFSVELKRDNEIARAKYS 265

Query: 505  PSLGSLNEKQLKGN---------QEVEAPNRLPWKR-----NTDGR---KRSNTELAERM 377
             S   +NEK    N          +  +   LPW++     + +G    KRSNTELAERM
Sbjct: 266  KSPSYINEKPFGANGGYGVQVSYDDNSSSIELPWEKERVMESVEGYLRGKRSNTELAERM 325

Query: 376  VPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEKWKLDEVVKLKFEEPHSLQMKRT 197
            +PEHEL+RLRNV+LRM ERIKVG+AGI Q LVD++HEKW+LDEVVKLKFEEP S  M+RT
Sbjct: 326  LPEHELKRLRNVALRMYERIKVGAAGINQDLVDAVHEKWRLDEVVKLKFEEPLSFNMRRT 385

Query: 196  HKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTKYNQTQLS-----EDVTDDIMHN 32
            H+ILE+RTGGLVIWRSGSSVVL+RG++Y+LHCV+SF+K ++         E+VT +   N
Sbjct: 386  HEILENRTGGLVIWRSGSSVVLYRGISYKLHCVRSFSKQDEAGKEILAHPEEVTSNATLN 445

Query: 31   VGNEH 17
            +G +H
Sbjct: 446  IGVKH 450


>ref|XP_007012816.1| CRS1 / YhbY domain-containing protein, putative isoform 5 [Theobroma
            cacao] gi|590575903|ref|XP_007012817.1| CRS1 / YhbY
            domain-containing protein, putative isoform 5 [Theobroma
            cacao] gi|508783179|gb|EOY30435.1| CRS1 / YhbY
            domain-containing protein, putative isoform 5 [Theobroma
            cacao] gi|508783180|gb|EOY30436.1| CRS1 / YhbY
            domain-containing protein, putative isoform 5 [Theobroma
            cacao]
          Length = 822

 Score =  279 bits (713), Expect = 4e-72
 Identities = 171/383 (44%), Positives = 234/383 (61%), Gaps = 16/383 (4%)
 Frame = -1

Query: 1129 PLTQPTVYSLPLKLKSES-SNCLRGIRIG-ILCSHHTIRAQLETTRTKKKVKPSFFEQIR 956
            P +  ++Y L L+ ++   +N  R ++     CSH TI+  +E TR K+K KPSF +QI+
Sbjct: 14   PTSSRSLYFLLLQAQTHCPNNSFRALKFKPSCCSHQTIKVGVEITR-KRKPKPSFLDQIK 72

Query: 955  HKWSHK-VTSQREKLPWQGQED-EEEVVKNERSFGVIVTESETDVESPM--NEPVSSALP 788
             KWS K + S REK PWQ +E+ EEE V+ ++SFG  ++ESE D +  +  ++PVSS+ P
Sbjct: 73   DKWSLKPIISTREKFPWQEKEEFEEEEVERKQSFGGAISESERDEDPQVEGSDPVSSSFP 132

Query: 787  NRFVSAPWVHGTDSKETTFDSHPEITTKKKENVDGLLDYGDKIVVNSVDQDKEVVE--FD 614
            +R +SAPW HG++  E  FD  PEI+  + +  D      +K +        EVV    D
Sbjct: 133  SRVISAPWSHGSEFNEPHFDFVPEISNFESKIEDSFAS--EKTIEFPGGNKAEVVGGLID 190

Query: 613  NIGDYNMELKLDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKGNQEVEAPNRLP 434
                 N E+ ++  KIG             V +EV    G  +    + N EV   +   
Sbjct: 191  KSESLNEEVNINKQKIGL-----------PVGKEVAAVEGLNDVVSSRENFEVSNSDDEG 239

Query: 433  WKRNTDG---RKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEK 263
                 D    +KRSNTE+ +RM+PEHE +RLRNV+LRM+ER KVG AGITQ+LV+ IHE+
Sbjct: 240  GSVEGDSGRSKKRSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVAGITQALVEYIHER 299

Query: 262  WKLDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTK 83
            WK+DEVVKLKFEEP SL MKRTH+ILE RTGGLVIWRSGSS+VL+RGM Y+LHCVQS+T 
Sbjct: 300  WKMDEVVKLKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRGMAYKLHCVQSYTS 359

Query: 82   YNQTQL-----SEDVTDDIMHNV 29
             N+  +     S +V  D   N+
Sbjct: 360  QNKVDMNALDCSTNVESDTTQNI 382


>ref|XP_007012815.1| CRS1 / YhbY domain-containing protein, putative isoform 4 [Theobroma
            cacao] gi|508783178|gb|EOY30434.1| CRS1 / YhbY
            domain-containing protein, putative isoform 4 [Theobroma
            cacao]
          Length = 818

 Score =  279 bits (713), Expect = 4e-72
 Identities = 171/383 (44%), Positives = 234/383 (61%), Gaps = 16/383 (4%)
 Frame = -1

Query: 1129 PLTQPTVYSLPLKLKSES-SNCLRGIRIG-ILCSHHTIRAQLETTRTKKKVKPSFFEQIR 956
            P +  ++Y L L+ ++   +N  R ++     CSH TI+  +E TR K+K KPSF +QI+
Sbjct: 14   PTSSRSLYFLLLQAQTHCPNNSFRALKFKPSCCSHQTIKVGVEITR-KRKPKPSFLDQIK 72

Query: 955  HKWSHK-VTSQREKLPWQGQED-EEEVVKNERSFGVIVTESETDVESPM--NEPVSSALP 788
             KWS K + S REK PWQ +E+ EEE V+ ++SFG  ++ESE D +  +  ++PVSS+ P
Sbjct: 73   DKWSLKPIISTREKFPWQEKEEFEEEEVERKQSFGGAISESERDEDPQVEGSDPVSSSFP 132

Query: 787  NRFVSAPWVHGTDSKETTFDSHPEITTKKKENVDGLLDYGDKIVVNSVDQDKEVVE--FD 614
            +R +SAPW HG++  E  FD  PEI+  + +  D      +K +        EVV    D
Sbjct: 133  SRVISAPWSHGSEFNEPHFDFVPEISNFESKIEDSFAS--EKTIEFPGGNKAEVVGGLID 190

Query: 613  NIGDYNMELKLDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKGNQEVEAPNRLP 434
                 N E+ ++  KIG             V +EV    G  +    + N EV   +   
Sbjct: 191  KSESLNEEVNINKQKIGL-----------PVGKEVAAVEGLNDVVSSRENFEVSNSDDEG 239

Query: 433  WKRNTDG---RKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEK 263
                 D    +KRSNTE+ +RM+PEHE +RLRNV+LRM+ER KVG AGITQ+LV+ IHE+
Sbjct: 240  GSVEGDSGRSKKRSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVAGITQALVEYIHER 299

Query: 262  WKLDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTK 83
            WK+DEVVKLKFEEP SL MKRTH+ILE RTGGLVIWRSGSS+VL+RGM Y+LHCVQS+T 
Sbjct: 300  WKMDEVVKLKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRGMAYKLHCVQSYTS 359

Query: 82   YNQTQL-----SEDVTDDIMHNV 29
             N+  +     S +V  D   N+
Sbjct: 360  QNKVDMNALDCSTNVESDTTQNI 382


>ref|XP_007012812.1| CRS1 / YhbY domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|590575888|ref|XP_007012813.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|590575892|ref|XP_007012814.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508783175|gb|EOY30431.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508783176|gb|EOY30432.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508783177|gb|EOY30433.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao]
          Length = 873

 Score =  279 bits (713), Expect = 4e-72
 Identities = 171/383 (44%), Positives = 234/383 (61%), Gaps = 16/383 (4%)
 Frame = -1

Query: 1129 PLTQPTVYSLPLKLKSES-SNCLRGIRIG-ILCSHHTIRAQLETTRTKKKVKPSFFEQIR 956
            P +  ++Y L L+ ++   +N  R ++     CSH TI+  +E TR K+K KPSF +QI+
Sbjct: 14   PTSSRSLYFLLLQAQTHCPNNSFRALKFKPSCCSHQTIKVGVEITR-KRKPKPSFLDQIK 72

Query: 955  HKWSHK-VTSQREKLPWQGQED-EEEVVKNERSFGVIVTESETDVESPM--NEPVSSALP 788
             KWS K + S REK PWQ +E+ EEE V+ ++SFG  ++ESE D +  +  ++PVSS+ P
Sbjct: 73   DKWSLKPIISTREKFPWQEKEEFEEEEVERKQSFGGAISESERDEDPQVEGSDPVSSSFP 132

Query: 787  NRFVSAPWVHGTDSKETTFDSHPEITTKKKENVDGLLDYGDKIVVNSVDQDKEVVE--FD 614
            +R +SAPW HG++  E  FD  PEI+  + +  D      +K +        EVV    D
Sbjct: 133  SRVISAPWSHGSEFNEPHFDFVPEISNFESKIEDSFAS--EKTIEFPGGNKAEVVGGLID 190

Query: 613  NIGDYNMELKLDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKGNQEVEAPNRLP 434
                 N E+ ++  KIG             V +EV    G  +    + N EV   +   
Sbjct: 191  KSESLNEEVNINKQKIGL-----------PVGKEVAAVEGLNDVVSSRENFEVSNSDDEG 239

Query: 433  WKRNTDG---RKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEK 263
                 D    +KRSNTE+ +RM+PEHE +RLRNV+LRM+ER KVG AGITQ+LV+ IHE+
Sbjct: 240  GSVEGDSGRSKKRSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVAGITQALVEYIHER 299

Query: 262  WKLDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTK 83
            WK+DEVVKLKFEEP SL MKRTH+ILE RTGGLVIWRSGSS+VL+RGM Y+LHCVQS+T 
Sbjct: 300  WKMDEVVKLKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRGMAYKLHCVQSYTS 359

Query: 82   YNQTQL-----SEDVTDDIMHNV 29
             N+  +     S +V  D   N+
Sbjct: 360  QNKVDMNALDCSTNVESDTTQNI 382


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score =  275 bits (703), Expect = 5e-71
 Identities = 166/378 (43%), Positives = 220/378 (58%), Gaps = 19/378 (5%)
 Frame = -1

Query: 1102 LPLKLKSESSNCLRGIRIGILCSHHTIRAQ-------LETTRTKKKVKPSFFEQIRHKWS 944
            L L+ ++  SN  R ++    CS+H+I+         L+TT+ K+K +PSFFEQIR KWS
Sbjct: 56   LLLQPQAHYSNTFRTLKFNCSCSYHSIQVDTQQVKVPLKTTKAKRKPRPSFFEQIRDKWS 115

Query: 943  HKVTSQREKLPWQGQEDEEEVVKNERSFGVIVTESETDVESPMNEPVSSALPNRFVSAPW 764
             K+ S REK PWQ Q +E      + S GV+V +SE  ++S +  PVSSA  +RFVS P 
Sbjct: 116  LKINSPREKFPWQEQAEE-----TQNSSGVVVPDSEV-IDSSVGSPVSSASESRFVSVPC 169

Query: 763  VHGTDSKETTFDSHPEITTKKKENVDGLLDYGDKIVVNSVDQDKEVVEFDNIGDYNMELK 584
            +H +  +     S PEI+                   NS +Q   V     +GD N+ L 
Sbjct: 170  IHESKPRNPRLVSEPEISQ------------------NSCEQGVNVKTEIEMGDANVSL- 210

Query: 583  LDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKGNQEVEAPNRLPWKRNT----- 419
                           N++        P  G  +    +G     +   LPWKR       
Sbjct: 211  ---------------NEK--------PPGGDEDFGNFEGFSGNSSLIELPWKRREGLQPV 247

Query: 418  --DGRKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEKWKLDEV 245
              DG  R NT +AERMVPEHELRRL+N++LRMLERIKVG+AG+TQSLVD+IHEKW+ DEV
Sbjct: 248  ERDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKDEV 307

Query: 244  VKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTK-----Y 80
            VKLKFE P S  MKRTH+ILE+RTGGLVIWR+GSSVVL+RGM Y+LHCVQS+ K      
Sbjct: 308  VKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMAYKLHCVQSYIKQERDNV 367

Query: 79   NQTQLSEDVTDDIMHNVG 26
            N ++ S+D  + I+ ++G
Sbjct: 368  NISEYSQDAANVIIQDIG 385


>ref|XP_012449426.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Gossypium raimondii]
          Length = 883

 Score =  271 bits (693), Expect = 8e-70
 Identities = 158/365 (43%), Positives = 232/365 (63%), Gaps = 14/365 (3%)
 Frame = -1

Query: 1114 TVYSLPLKLKSESSNCLRGIRIGILC-SHHTIRAQLETTRTKKKVKPSFFEQIRHKWSHK 938
            ++Y L L+ K+++ N  R ++    C SH T++  ++ ++ K+K KPSF +QI+ KWS K
Sbjct: 20   SLYYLILQTKTQN-NSFRALKFKSYCVSHQTVKVGIDISKKKRKPKPSFLDQIKDKWSQK 78

Query: 937  -VTSQREKLPWQGQED--EEEVVKNERSFGVIVTESETDVESP---MNEPVSSALPNRFV 776
             + S REKLPWQ +E+  E+E V+ E++F    +E+E+D E P   +++PVS  LP++ +
Sbjct: 79   PIISTREKLPWQEKEELEEQEEVEKEQTFEATASETESD-EDPRVEVSDPVSIPLPSQVI 137

Query: 775  SAPWVHGTDSKETTFDSHPEITTKKKENVDGLLDYGDKIVVNSVDQDKEVVEFDNIGDYN 596
            +APW HG    E  FD  PE             ++  +I V+  ++       D +GD  
Sbjct: 138  AAPWSHGRKFNEPHFDFVPESP-----------EFESQIEVSFANEKP----IDFVGDRI 182

Query: 595  MELKLDDFKIGANPIELLRNKQTEVA-----REVIPSLGSLNEKQLKGNQ--EVEAPNRL 437
             + +L D +I  N  + + +   ++A      EV+ S  +L       N+   +E   + 
Sbjct: 183  EKPELLDEEISFNKQKPILSAHKKIAAVEGINEVVSSRQNLEVSTSGSNEGGSIEGDGKR 242

Query: 436  PWKRNTDGRKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEKWK 257
                   G+K+SNTE+AERM+PEHELRRLRN++LRM+ER KVG+AGITQ+LV+ I+E+WK
Sbjct: 243  -------GKKKSNTEMAERMIPEHELRRLRNIALRMVERTKVGAAGITQALVEHIYERWK 295

Query: 256  LDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTKYN 77
            LDEV+KLKFEEP SL MKRTH++LE RTGGLVIWRSG SVVL+RGM Y+LHCVQS++  +
Sbjct: 296  LDEVIKLKFEEPLSLNMKRTHEVLEKRTGGLVIWRSGGSVVLYRGMAYKLHCVQSYSGQD 355

Query: 76   QTQLS 62
            Q   S
Sbjct: 356  QADTS 360


>gb|KJB65181.1| hypothetical protein B456_010G083500 [Gossypium raimondii]
          Length = 875

 Score =  271 bits (693), Expect = 8e-70
 Identities = 158/365 (43%), Positives = 232/365 (63%), Gaps = 14/365 (3%)
 Frame = -1

Query: 1114 TVYSLPLKLKSESSNCLRGIRIGILC-SHHTIRAQLETTRTKKKVKPSFFEQIRHKWSHK 938
            ++Y L L+ K+++ N  R ++    C SH T++  ++ ++ K+K KPSF +QI+ KWS K
Sbjct: 20   SLYYLILQTKTQN-NSFRALKFKSYCVSHQTVKVGIDISKKKRKPKPSFLDQIKDKWSQK 78

Query: 937  -VTSQREKLPWQGQED--EEEVVKNERSFGVIVTESETDVESP---MNEPVSSALPNRFV 776
             + S REKLPWQ +E+  E+E V+ E++F    +E+E+D E P   +++PVS  LP++ +
Sbjct: 79   PIISTREKLPWQEKEELEEQEEVEKEQTFEATASETESD-EDPRVEVSDPVSIPLPSQVI 137

Query: 775  SAPWVHGTDSKETTFDSHPEITTKKKENVDGLLDYGDKIVVNSVDQDKEVVEFDNIGDYN 596
            +APW HG    E  FD  PE             ++  +I V+  ++       D +GD  
Sbjct: 138  AAPWSHGRKFNEPHFDFVPESP-----------EFESQIEVSFANEKP----IDFVGDRI 182

Query: 595  MELKLDDFKIGANPIELLRNKQTEVA-----REVIPSLGSLNEKQLKGNQ--EVEAPNRL 437
             + +L D +I  N  + + +   ++A      EV+ S  +L       N+   +E   + 
Sbjct: 183  EKPELLDEEISFNKQKPILSAHKKIAAVEGINEVVSSRQNLEVSTSGSNEGGSIEGDGKR 242

Query: 436  PWKRNTDGRKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEKWK 257
                   G+K+SNTE+AERM+PEHELRRLRN++LRM+ER KVG+AGITQ+LV+ I+E+WK
Sbjct: 243  -------GKKKSNTEMAERMIPEHELRRLRNIALRMVERTKVGAAGITQALVEHIYERWK 295

Query: 256  LDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTKYN 77
            LDEV+KLKFEEP SL MKRTH++LE RTGGLVIWRSG SVVL+RGM Y+LHCVQS++  +
Sbjct: 296  LDEVIKLKFEEPLSLNMKRTHEVLEKRTGGLVIWRSGGSVVLYRGMAYKLHCVQSYSGQD 355

Query: 76   QTQLS 62
            Q   S
Sbjct: 356  QADTS 360


>ref|XP_012449427.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Gossypium raimondii]
            gi|763798225|gb|KJB65180.1| hypothetical protein
            B456_010G083500 [Gossypium raimondii]
          Length = 867

 Score =  271 bits (693), Expect = 8e-70
 Identities = 158/365 (43%), Positives = 232/365 (63%), Gaps = 14/365 (3%)
 Frame = -1

Query: 1114 TVYSLPLKLKSESSNCLRGIRIGILC-SHHTIRAQLETTRTKKKVKPSFFEQIRHKWSHK 938
            ++Y L L+ K+++ N  R ++    C SH T++  ++ ++ K+K KPSF +QI+ KWS K
Sbjct: 20   SLYYLILQTKTQN-NSFRALKFKSYCVSHQTVKVGIDISKKKRKPKPSFLDQIKDKWSQK 78

Query: 937  -VTSQREKLPWQGQED--EEEVVKNERSFGVIVTESETDVESP---MNEPVSSALPNRFV 776
             + S REKLPWQ +E+  E+E V+ E++F    +E+E+D E P   +++PVS  LP++ +
Sbjct: 79   PIISTREKLPWQEKEELEEQEEVEKEQTFEATASETESD-EDPRVEVSDPVSIPLPSQVI 137

Query: 775  SAPWVHGTDSKETTFDSHPEITTKKKENVDGLLDYGDKIVVNSVDQDKEVVEFDNIGDYN 596
            +APW HG    E  FD  PE             ++  +I V+  ++       D +GD  
Sbjct: 138  AAPWSHGRKFNEPHFDFVPESP-----------EFESQIEVSFANEKP----IDFVGDRI 182

Query: 595  MELKLDDFKIGANPIELLRNKQTEVA-----REVIPSLGSLNEKQLKGNQ--EVEAPNRL 437
             + +L D +I  N  + + +   ++A      EV+ S  +L       N+   +E   + 
Sbjct: 183  EKPELLDEEISFNKQKPILSAHKKIAAVEGINEVVSSRQNLEVSTSGSNEGGSIEGDGKR 242

Query: 436  PWKRNTDGRKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEKWK 257
                   G+K+SNTE+AERM+PEHELRRLRN++LRM+ER KVG+AGITQ+LV+ I+E+WK
Sbjct: 243  -------GKKKSNTEMAERMIPEHELRRLRNIALRMVERTKVGAAGITQALVEHIYERWK 295

Query: 256  LDEVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTKYN 77
            LDEV+KLKFEEP SL MKRTH++LE RTGGLVIWRSG SVVL+RGM Y+LHCVQS++  +
Sbjct: 296  LDEVIKLKFEEPLSLNMKRTHEVLEKRTGGLVIWRSGGSVVLYRGMAYKLHCVQSYSGQD 355

Query: 76   QTQLS 62
            Q   S
Sbjct: 356  QADTS 360


>gb|KHG14705.1| hypothetical protein F383_17214 [Gossypium arboreum]
          Length = 865

 Score =  267 bits (683), Expect = 1e-68
 Identities = 162/376 (43%), Positives = 230/376 (61%), Gaps = 12/376 (3%)
 Frame = -1

Query: 1114 TVYSLPLKLKSESSNCLRGIRIGILC-SHHTIRAQLETTRTKKKVKPSFFEQIRHKWSHK 938
            ++Y L L+ K+++ N  R ++    C SH TI+  ++ ++ K+K KPSF  QI+ KWS K
Sbjct: 20   SLYYLILQTKTQN-NSFRALKFKSYCVSHQTIKVGIDISKKKRKPKPSFLYQIKDKWSQK 78

Query: 937  -VTSQREKLPWQGQED--EEEVVKNERSFGVIVTESETDVESPM--NEPVSSALPNRFVS 773
             + S REKLPWQ +E+  E+E V+ E++F    +E+E+D +  +  ++ VS  LP+R ++
Sbjct: 79   PIISTREKLPWQEKEELEEQEEVEKEQTFEATASETESDEDPRVEASDQVSFPLPSRVIA 138

Query: 772  APWVHGTDSKETTFDSHPEITTKKKENVDGLLDYGDKIVVNSVDQDKEVVEFDNIGDYNM 593
            APW HG    E  FD  PE             ++  +I V+  ++       D +GD   
Sbjct: 139  APWSHGRKFNELHFDFVPESP-----------EFESQIEVSFANEKP----IDFVGDRIE 183

Query: 592  ELKLDDFKIGANPIELLRNKQTEVAREVIPSLGSLNEKQLKGNQEVEAPNRLPWKRNT-- 419
            + +L D +I  N     + K T  A   I ++  +NE  +   Q +E       +  +  
Sbjct: 184  KPELLDEEISFN-----KQKPTLSAHRKIAAVEGINEV-VSSRQNLEVSTNGSNEGGSIE 237

Query: 418  ----DGRKRSNTELAERMVPEHELRRLRNVSLRMLERIKVGSAGITQSLVDSIHEKWKLD 251
                 G+K+SNTE+AERM+PEHELRRLRN +LRM+ER KVG+AGITQ+LV+ IHE+WKLD
Sbjct: 238  GDGKRGKKKSNTEMAERMIPEHELRRLRNFALRMVERTKVGAAGITQALVEHIHERWKLD 297

Query: 250  EVVKLKFEEPHSLQMKRTHKILESRTGGLVIWRSGSSVVLFRGMTYRLHCVQSFTKYNQT 71
            EV+KLKFEEP SL MKRTH++LE RTGGLVIWR+G SVVL+RGM Y+LHCVQS++   Q 
Sbjct: 298  EVIKLKFEEPLSLNMKRTHEVLEKRTGGLVIWRAGGSVVLYRGMAYKLHCVQSYS--GQD 355

Query: 70   QLSEDVTDDIMHNVGN 23
            Q      D I  N  N
Sbjct: 356  QADTSALDVITTNTEN 371