BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00028756
         (442 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containi...   261   1e-67
ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, part...   261   1e-67
ref|XP_002320719.2| pentatricopeptide repeat-containing family p...   233   3e-59
ref|XP_011034218.1| PREDICTED: pentatricopeptide repeat-containi...   232   9e-59
emb|CBI38872.3| unnamed protein product [Vitis vinifera]              225   1e-56
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   225   1e-56
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   225   1e-56
ref|XP_012083585.1| PREDICTED: pentatricopeptide repeat-containi...   218   1e-54
gb|AHB18411.1| pentatricopeptide repeat-containing protein [Goss...   216   7e-54
ref|XP_002511709.1| pentatricopeptide repeat-containing protein,...   215   9e-54
ref|XP_002511699.1| pentatricopeptide repeat-containing protein,...   215   9e-54
gb|AKH05179.1| chlororespiratory reduction 4 [Francoa sonchifolia]    214   2e-53
ref|XP_012489757.1| PREDICTED: pentatricopeptide repeat-containi...   213   5e-53
ref|XP_010098917.1| hypothetical protein L484_025573 [Morus nota...   213   6e-53
ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily p...   213   6e-53
gb|AKH05198.1| chlororespiratory reduction 4 [Pelargonium transv...   212   1e-52
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...   211   2e-52
ref|XP_008438168.1| PREDICTED: pentatricopeptide repeat-containi...   210   4e-52
gb|AKH05197.1| chlororespiratory reduction 4 [Pelargonium tetrag...   207   3e-51
gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]         207   3e-51

>ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Citrus sinensis]
           gi|641867125|gb|KDO85809.1| hypothetical protein
           CISIN_1g047120mg [Citrus sinensis]
          Length = 634

 Score =  261 bits (667), Expect = 1e-67
 Identities = 124/145 (85%), Positives = 136/145 (93%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           Q+FDKM IRDSVSYNSMIDGYVK GN++SA ELFDSMP+RERNLI+WNS+LNGYAQ +SG
Sbjct: 175 QLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSG 234

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           LQFAW +FE+MPERDLISWNSML GCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAK 
Sbjct: 235 LQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKL 294

Query: 80  GRVDVARVLFDEMPERDVVAYNSMM 6
           GRVD+AR LFDEMP+RDVVA N+MM
Sbjct: 295 GRVDIARRLFDEMPKRDVVACNAMM 319



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 35/73 (47%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           DL   N ++   V+CG ++ A+ LFDKM  RD VS+ +MIDGY KSG ++ AR LFD MP
Sbjct: 153 DLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMP 212

Query: 38  --ERDVVAYNSMM 6
             ER+++++NS++
Sbjct: 213 IRERNLISWNSVL 225


>ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, partial [Citrus clementina]
           gi|557547533|gb|ESR58511.1| hypothetical protein
           CICLE_v10023562mg, partial [Citrus clementina]
          Length = 658

 Score =  261 bits (667), Expect = 1e-67
 Identities = 124/145 (85%), Positives = 136/145 (93%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           Q+FDKM IRDSVSYNSMIDGYVK GN++SA ELFDSMP+RERNLI+WNS+LNGYAQ +SG
Sbjct: 232 QLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSG 291

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           LQFAW +FE+MPERDLISWNSML GCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAK 
Sbjct: 292 LQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKL 351

Query: 80  GRVDVARVLFDEMPERDVVAYNSMM 6
           GRVD+AR LFDEMP+RDVVA N+MM
Sbjct: 352 GRVDIARRLFDEMPKRDVVACNAMM 376



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 35/73 (47%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           DL   N ++   V+CG ++ A+ LFDKM  RD VS+ +MIDGY KSG ++ AR LFD MP
Sbjct: 210 DLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMP 269

Query: 38  --ERDVVAYNSMM 6
             ER+++++NS++
Sbjct: 270 IRERNLISWNSVL 282


>ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550323642|gb|EEE99034.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 643

 Score =  233 bits (595), Expect = 3e-59
 Identities = 107/145 (73%), Positives = 125/145 (86%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           QVFD+M  RDSVSYNSMIDGYVK G +D A  +FD +P+ ERNLI+WNS++ GYAQ   G
Sbjct: 183 QVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDG 242

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           +  AW LF +MPERDLISWNSM+DGCVKCG+M+DAQ LFD+MP RD+VSWANMIDGYAK+
Sbjct: 243 ILVAWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKN 302

Query: 80  GRVDVARVLFDEMPERDVVAYNSMM 6
           GRVD+AR LFDEMPERDVVAYN+MM
Sbjct: 303 GRVDIARSLFDEMPERDVVAYNAMM 327



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 44/99 (44%), Positives = 67/99 (67%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           Q+F KM  RD +S+NSMIDG VK G M+ A  LFD MP   R++++W +M++GYA+    
Sbjct: 248 QLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMP--NRDIVSWANMIDGYAK-NGR 304

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALF 144
           +  A  LF+ MPERD++++N+M+ G V+ G   +A  +F
Sbjct: 305 VDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIF 343



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 36/73 (49%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           DL   N ++   VKCG +  A  +FD+MPKRD VS+ +MIDGY K GR+D+ARV+FD +P
Sbjct: 161 DLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIP 220

Query: 38  --ERDVVAYNSMM 6
             ER+++++NS++
Sbjct: 221 LEERNLISWNSLI 233


>ref|XP_011034218.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Populus euphratica]
          Length = 641

 Score =  232 bits (591), Expect = 9e-59
 Identities = 107/145 (73%), Positives = 124/145 (85%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           QVFD+M  RDSVSYNSMIDGYVK G +D A  +FD +P+ ERNLI+WNS++ GYAQ   G
Sbjct: 181 QVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDG 240

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           +  AW LFE MPERDLISWNSM+DGCVKCG+M+DAQ LFD+MP RD+VSWANMIDGYAK+
Sbjct: 241 ILVAWQLFENMPERDLISWNSMIDGCVKCGRMEDAQCLFDRMPNRDIVSWANMIDGYAKN 300

Query: 80  GRVDVARVLFDEMPERDVVAYNSMM 6
           GRVD+AR LFDEMPERDVVA N+MM
Sbjct: 301 GRVDIARCLFDEMPERDVVACNAMM 325



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 43/99 (43%), Positives = 66/99 (66%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           Q+F+ M  RD +S+NSMIDG VK G M+ A  LFD MP   R++++W +M++GYA+    
Sbjct: 246 QLFENMPERDLISWNSMIDGCVKCGRMEDAQCLFDRMP--NRDIVSWANMIDGYAK-NGR 302

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALF 144
           +  A  LF+ MPERD+++ N+M+ G V+ G   +A  +F
Sbjct: 303 VDIARCLFDEMPERDVVACNAMMGGYVQNGYCMEALGIF 341



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 36/73 (49%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           DL   N ++   VKCG +  A+ +FD+MPKRD VS+ +MIDGY K GR+D+ARV+FD +P
Sbjct: 159 DLFLQNCLISFYVKCGCLVRARQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIP 218

Query: 38  --ERDVVAYNSMM 6
             ER+++++NS++
Sbjct: 219 LEERNLISWNSLI 231


>emb|CBI38872.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  225 bits (573), Expect = 1e-56
 Identities = 103/146 (70%), Positives = 126/146 (86%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           Q+FD+M  RDSVS+NSMIDGYVK G + SA ELFD MPM ++NLI+WNSM++GYA+   G
Sbjct: 178 QLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEG 237

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           L+ AW LFE MP+RDLISWNSM+DGCVKCGKM++A  LF++MPKRDVVSWANM+DGYAK 
Sbjct: 238 LRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKL 297

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           G +D+AR LFDEMPERDV++ N+MMA
Sbjct: 298 GEIDIARGLFDEMPERDVISCNAMMA 323



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 32/74 (43%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           D+   N ++   ++CG +  A+ LFD+M KRD VS+ +MIDGY K G V  AR LFD MP
Sbjct: 156 DVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMP 215

Query: 38  --ERDVVAYNSMMA 3
             +++++++NSM++
Sbjct: 216 MEQKNLISWNSMIS 229


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Vitis vinifera]
           gi|731421186|ref|XP_010661651.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Vitis vinifera]
           gi|731421189|ref|XP_010661652.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Vitis vinifera]
           gi|731421191|ref|XP_010661653.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Vitis vinifera]
          Length = 635

 Score =  225 bits (573), Expect = 1e-56
 Identities = 103/146 (70%), Positives = 126/146 (86%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           Q+FD+M  RDSVS+NSMIDGYVK G + SA ELFD MPM ++NLI+WNSM++GYA+   G
Sbjct: 178 QLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEG 237

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           L+ AW LFE MP+RDLISWNSM+DGCVKCGKM++A  LF++MPKRDVVSWANM+DGYAK 
Sbjct: 238 LRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKL 297

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           G +D+AR LFDEMPERDV++ N+MMA
Sbjct: 298 GEIDIARGLFDEMPERDVISCNAMMA 323



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 40/185 (21%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           ++F++M  RD +S+NSMIDG VK G M++A  LF+ MP  +R++++W +M++GYA+    
Sbjct: 243 ELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMP--KRDVVSWANMVDGYAKLGE- 299

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWAN-------- 105
           +  A  LF+ MPERD+IS N+M+ G V+ G + +A   F  M  R  +   N        
Sbjct: 300 IDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLS 359

Query: 104 --------------------------------MIDGYAKSGRVDVARVLFDEMPERDVVA 21
                                           +ID YAK G +D A  +F+++ ++ +  
Sbjct: 360 AIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDH 419

Query: 20  YNSMM 6
           +N+++
Sbjct: 420 WNAII 424



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 32/74 (43%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           D+   N ++   ++CG +  A+ LFD+M KRD VS+ +MIDGY K G V  AR LFD MP
Sbjct: 156 DVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMP 215

Query: 38  --ERDVVAYNSMMA 3
             +++++++NSM++
Sbjct: 216 MEQKNLISWNSMIS 229


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  225 bits (573), Expect = 1e-56
 Identities = 103/146 (70%), Positives = 125/146 (85%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           Q+FD+M  RDSVS+NSMIDGYVK G + SA ELFD MPM ++NLI+WNSM++GYA+   G
Sbjct: 234 QLFDRMMXRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEG 293

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           L+ AW LFE MP+RDLISWNSM+DGCVKCGKM++A  LF+ MPKRDVVSWANM+DGYAK 
Sbjct: 294 LRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKL 353

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           G +D+AR LFDEMPERDV++ N+MMA
Sbjct: 354 GEIDIARGLFDEMPERDVISCNAMMA 379



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 31/74 (41%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           D+   N ++   ++CG +  A+ LFD+M  RD VS+ +MIDGY K G V  AR LFD MP
Sbjct: 212 DVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVKHGMVKSARELFDVMP 271

Query: 38  --ERDVVAYNSMMA 3
             +++++++NSM++
Sbjct: 272 MEQKNLISWNSMIS 285



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
 Frame = -3

Query: 437 VFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSGL 258
           +F+ M  RD VS+ +M+DGY K G +D A  LFD MP  ER++I+ N+M+ GY Q    +
Sbjct: 331 LFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMP--ERDVISCNAMMAGYVQNGXLM 388

Query: 257 QFAWHLFERMPERDLISWNS----MLDGCVKCGKMDDAQALF----DKMPKRDVVSWANM 102
           +      + +  ++L   N+     L    + G  D+  AL     D            +
Sbjct: 389 EALXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGXAL 448

Query: 101 IDGYAKSGRVDVARV 57
           ID YAK G +D A +
Sbjct: 449 IDMYAKCGSIDNALI 463


>ref|XP_012083585.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Jatropha curcas]
           gi|643717136|gb|KDP28762.1| hypothetical protein
           JCGZ_14533 [Jatropha curcas]
          Length = 627

 Score =  218 bits (555), Expect = 1e-54
 Identities = 100/145 (68%), Positives = 121/145 (83%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           QVFD M  +D+VSYNSMIDGYVK+G +D A  LF+ MP  ERNLI+WNS+++GY Q  +G
Sbjct: 179 QVFDTMPRKDTVSYNSMIDGYVKRGKIDLARGLFELMPTEERNLISWNSLISGYMQSGNG 238

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           LQ AW LFE+MP+RDLISWNSM+DGC KCG+MDDAQALFD+MP+RD+VSWANMIDGYAK 
Sbjct: 239 LQLAWELFEKMPKRDLISWNSMIDGCAKCGRMDDAQALFDRMPERDMVSWANMIDGYAKL 298

Query: 80  GRVDVARVLFDEMPERDVVAYNSMM 6
           G V++ R  FD+MPE+DVV  N MM
Sbjct: 299 GHVNIGRRFFDDMPEKDVVVCNVMM 323



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 34/91 (37%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
 Frame = -3

Query: 269 RSGLQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGY 90
           R GLQ    L +     D+   N ++   ++C  ++ A+ +FD MP++D VS+ +MIDGY
Sbjct: 140 REGLQIHGLLRKMEFGSDVFLQNCLMTLYLRCWCLEHARQVFDTMPRKDTVSYNSMIDGY 199

Query: 89  AKSGRVDVARVLFDEMP--ERDVVAYNSMMA 3
            K G++D+AR LF+ MP  ER+++++NS+++
Sbjct: 200 VKRGKIDLARGLFELMPTEERNLISWNSLIS 230


>gb|AHB18411.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 637

 Score =  216 bits (549), Expect = 7e-54
 Identities = 99/146 (67%), Positives = 124/146 (84%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           Q+FD+M +RDSVSYNSMIDGY+K+G +D A ELFD MP+  +NLITWNSM++GY Q + G
Sbjct: 178 QLFDRMSMRDSVSYNSMIDGYIKRGMIDLAKELFDVMPLENKNLITWNSMISGYTQLKDG 237

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           +  A  LFE+MP+RDLISWNSM++G VKCG M+DAQ LFDKMP+RDVVSWANMI+GYAK 
Sbjct: 238 MGLALGLFEKMPDRDLISWNSMINGFVKCGNMEDAQILFDKMPRRDVVSWANMINGYAKV 297

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           G++D+AR LF+EM ERD+V  N+MMA
Sbjct: 298 GKIDLARSLFNEMSERDIVVCNAMMA 323



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
 Frame = -3

Query: 437 VFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSGL 258
           +F+KM  RD +S+NSMI+G+VK GNM+ A  LFD MP R+  +++W +M+NGYA+    +
Sbjct: 244 LFEKMPDRDLISWNSMINGFVKCGNMEDAQILFDKMPRRD--VVSWANMINGYAKVGK-I 300

Query: 257 QFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKR-----DVVSWANMIDG 93
             A  LF  M ERD++  N+M+ GCV+ G   +A  +F  +P+      D  +    +  
Sbjct: 301 DLARSLFNEMSERDIVVCNAMMAGCVQNGYCGEALEIFYHLPRNCSLQPDSATLLIALSA 360

Query: 92  YAKSGRVD 69
            A+ G VD
Sbjct: 361 IAQLGHVD 368



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 34/117 (29%)
 Frame = -3

Query: 254 FAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFD---------------------- 141
           +A  LF+RM  RD +S+NSM+DG +K G +D A+ LFD                      
Sbjct: 175 YARQLFDRMSMRDSVSYNSMIDGYIKRGMIDLAKELFDVMPLENKNLITWNSMISGYTQL 234

Query: 140 ------------KMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMPERDVVAYNSMM 6
                       KMP RD++SW +MI+G+ K G ++ A++LFD+MP RDVV++ +M+
Sbjct: 235 KDGMGLALGLFEKMPDRDLISWNSMINGFVKCGNMEDAQILFDKMPRRDVVSWANMI 291



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 31/74 (41%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           DL   N ++   ++CG +  A+ LFD+M  RD VS+ +MIDGY K G +D+A+ LFD MP
Sbjct: 156 DLFLQNCLISYYLRCGFIGYARQLFDRMSMRDSVSYNSMIDGYIKRGMIDLAKELFDVMP 215

Query: 38  --ERDVVAYNSMMA 3
              ++++ +NSM++
Sbjct: 216 LENKNLITWNSMIS 229


>ref|XP_002511709.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548889|gb|EEF50378.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 450

 Score =  215 bits (548), Expect = 9e-54
 Identities = 98/146 (67%), Positives = 123/146 (84%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           QVFDKM +RDSVSYNSMI GYVK GN+D A +L+D MP+  RNL++WNS+L+GY +  +G
Sbjct: 156 QVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMPINWRNLVSWNSLLSGYMRSDNG 215

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
            + AW+LFE+MPERDLISWNSM+DGC K G+M+DAQALFD MP+R ++SWANM+DGYAK 
Sbjct: 216 FELAWNLFEKMPERDLISWNSMIDGCAKRGRMEDAQALFDTMPERTIISWANMVDGYAKL 275

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           G VD+AR  FD MP+RDVVA N+MM+
Sbjct: 276 GYVDIARKFFDNMPDRDVVACNAMMS 301



 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 43/103 (41%), Positives = 68/103 (66%)
 Frame = -3

Query: 437 VFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSGL 258
           +F+KM  RD +S+NSMIDG  K+G M+ A  LFD+MP  ER +I+W +M++GYA+    +
Sbjct: 222 LFEKMPERDLISWNSMIDGCAKRGRMEDAQALFDTMP--ERTIISWANMVDGYAKL-GYV 278

Query: 257 QFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPK 129
             A   F+ MP+RD+++ N+M+ G V+ G   +A  +F  M +
Sbjct: 279 DIARKFFDNMPDRDVVACNAMMSGYVQNGYCMEALGIFHDMQR 321



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 34/132 (25%)
 Frame = -3

Query: 299 NSMLNGYAQWRSGLQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFD------- 141
           N ++  Y + R  + +A  +F++MP RD +S+NSM+ G VK G +D A+ L+D       
Sbjct: 139 NCLIGLYVKCRC-IDYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMPINWR 197

Query: 140 ---------------------------KMPKRDVVSWANMIDGYAKSGRVDVARVLFDEM 42
                                      KMP+RD++SW +MIDG AK GR++ A+ LFD M
Sbjct: 198 NLVSWNSLLSGYMRSDNGFELAWNLFEKMPERDLISWNSMIDGCAKRGRMEDAQALFDTM 257

Query: 41  PERDVVAYNSMM 6
           PER ++++ +M+
Sbjct: 258 PERTIISWANMV 269



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           D+   N ++   VKC  +D A+ +FDKMP RD VS+ +MI GY K G +D+AR L+D MP
Sbjct: 134 DVFLQNCLIGLYVKCRCIDYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMP 193

Query: 38  --ERDVVAYNSMMA 3
              R++V++NS+++
Sbjct: 194 INWRNLVSWNSLLS 207


>ref|XP_002511699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548879|gb|EEF50368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 474

 Score =  215 bits (548), Expect = 9e-54
 Identities = 98/146 (67%), Positives = 123/146 (84%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           QVFDKM +RDSVSYNSMI GYVK GN+D A +L+D MP+  RNL++WNS+L+GY +  +G
Sbjct: 180 QVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMPINWRNLVSWNSLLSGYMRSDNG 239

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
            + AW+LFE+MPERDLISWNSM+DGC K G+M+DAQALFD MP+R ++SWANM+DGYAK 
Sbjct: 240 FELAWNLFEKMPERDLISWNSMIDGCAKRGRMEDAQALFDTMPERTIISWANMVDGYAKL 299

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           G VD+AR  FD MP+RDVVA N+MM+
Sbjct: 300 GYVDIARKFFDNMPDRDVVACNAMMS 325



 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 43/103 (41%), Positives = 68/103 (66%)
 Frame = -3

Query: 437 VFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSGL 258
           +F+KM  RD +S+NSMIDG  K+G M+ A  LFD+MP  ER +I+W +M++GYA+    +
Sbjct: 246 LFEKMPERDLISWNSMIDGCAKRGRMEDAQALFDTMP--ERTIISWANMVDGYAKL-GYV 302

Query: 257 QFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPK 129
             A   F+ MP+RD+++ N+M+ G V+ G   +A  +F  M +
Sbjct: 303 DIARKFFDNMPDRDVVACNAMMSGYVQNGYCMEALGIFHDMQR 345



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 34/132 (25%)
 Frame = -3

Query: 299 NSMLNGYAQWRSGLQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFD------- 141
           N ++  Y + R  + +A  +F++MP RD +S+NSM+ G VK G +D A+ L+D       
Sbjct: 163 NCLIGLYVKCRC-IDYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMPINWR 221

Query: 140 ---------------------------KMPKRDVVSWANMIDGYAKSGRVDVARVLFDEM 42
                                      KMP+RD++SW +MIDG AK GR++ A+ LFD M
Sbjct: 222 NLVSWNSLLSGYMRSDNGFELAWNLFEKMPERDLISWNSMIDGCAKRGRMEDAQALFDTM 281

Query: 41  PERDVVAYNSMM 6
           PER ++++ +M+
Sbjct: 282 PERTIISWANMV 293



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           D+   N ++   VKC  +D A+ +FDKMP RD VS+ +MI GY K G +D+AR L+D MP
Sbjct: 158 DVFLQNCLIGLYVKCRCIDYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMP 217

Query: 38  --ERDVVAYNSMMA 3
              R++V++NS+++
Sbjct: 218 INWRNLVSWNSLLS 231


>gb|AKH05179.1| chlororespiratory reduction 4 [Francoa sonchifolia]
          Length = 638

 Score =  214 bits (545), Expect = 2e-53
 Identities = 98/146 (67%), Positives = 122/146 (83%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           QVFDKM +RDSVSYNSMIDGYVK G +DSA  LFD MP +E+NLI+WNS+++GYA+   G
Sbjct: 179 QVFDKMPVRDSVSYNSMIDGYVKCGEIDSARLLFDYMPEKEKNLISWNSVISGYARLEDG 238

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
            + AW LF+ MPE+D  SWNS++DGCVK GKMDDA  LF++MP+RDV++WANMIDG+ K 
Sbjct: 239 FKTAWELFDTMPEKDSASWNSLIDGCVKRGKMDDAHDLFNRMPERDVITWANMIDGFVKL 298

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           G VD+AR LFD+MPERDV+A N+MMA
Sbjct: 299 GNVDIARELFDQMPERDVIACNAMMA 324



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 40/185 (21%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           ++FD M  +DS S+NS+IDG VK+G MD A +LF+ MP  ER++ITW +M++G+ +    
Sbjct: 244 ELFDTMPEKDSASWNSLIDGCVKRGKMDDAHDLFNRMP--ERDVITWANMIDGFVKL-GN 300

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWAN-------- 105
           +  A  LF++MPERD+I+ N+M+ G V+ G   +A  +F  M   + +S  N        
Sbjct: 301 VDIARELFDQMPERDVIACNAMMAGYVQNGYCREALEIFHNMQTLNCLSPDNVTLLIVLS 360

Query: 104 --------------------------------MIDGYAKSGRVDVARVLFDEMPERDVVA 21
                                           +ID Y+K G ++ A ++F+ + +++V  
Sbjct: 361 AAAQLGQFDEGVAAHSYIKENRFTLSGKLGVALIDMYSKCGDIENAMLVFENIEKKEVDH 420

Query: 20  YNSMM 6
           +N+++
Sbjct: 421 WNAII 425



 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 37/91 (40%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
 Frame = -3

Query: 269 RSGLQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGY 90
           + G+Q    L +   +RD+   NS++   ++CG ++ A+ +FDKMP RD VS+ +MIDGY
Sbjct: 140 KEGMQIHGLLRKMEFDRDVFLQNSLIGLYLRCGCVEFARQVFDKMPVRDSVSYNSMIDGY 199

Query: 89  AKSGRVDVARVLFDEMPERD--VVAYNSMMA 3
            K G +D AR+LFD MPE++  ++++NS+++
Sbjct: 200 VKCGEIDSARLLFDYMPEKEKNLISWNSVIS 230


>ref|XP_012489757.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Gossypium raimondii]
           gi|763773983|gb|KJB41106.1| hypothetical protein
           B456_007G090700 [Gossypium raimondii]
          Length = 637

 Score =  213 bits (542), Expect = 5e-53
 Identities = 98/146 (67%), Positives = 124/146 (84%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           Q+FD+M +RDSVSYNSMIDGY+K+G +D A ELFD MP+ ++NLITWNSM++GY Q + G
Sbjct: 178 QLFDRMSMRDSVSYNSMIDGYIKRGMIDLAKELFDVMPLEKKNLITWNSMISGYTQLKDG 237

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           +  A  LFE+MP+RDLISWNSM++G VKCG M+DAQ LFDKMP+ DVVSWANMI+GYAK 
Sbjct: 238 MGLALGLFEKMPDRDLISWNSMINGYVKCGNMEDAQILFDKMPRWDVVSWANMINGYAKV 297

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           G++D+AR LF+EM ERD+V  N+MMA
Sbjct: 298 GKIDLARSLFNEMSERDIVVCNAMMA 323



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 50/140 (35%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
 Frame = -3

Query: 437 VFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSGL 258
           +F+KM  RD +S+NSMI+GYVK GNM+ A  LFD MP  +  +++W +M+NGYA+    +
Sbjct: 244 LFEKMPDRDLISWNSMINGYVKCGNMEDAQILFDKMPRWD--VVSWANMINGYAKVGK-I 300

Query: 257 QFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKR-----DVVSWANMIDG 93
             A  LF  M ERD++  N+M+ GCV+ G   +A  +F  + +      D  +    +  
Sbjct: 301 DLARSLFNEMSERDIVVCNAMMAGCVQNGYCGEALEIFYHLQRNCSLQPDSATLLIALSA 360

Query: 92  YAKSGRVDVARVLFDEMPER 33
            A+ G VD    L   + ++
Sbjct: 361 IAQLGHVDKGLALHHYLKQK 380



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 38/86 (44%), Positives = 63/86 (73%), Gaps = 3/86 (3%)
 Frame = -3

Query: 254 FAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMP--KRDVVSWANMIDGYAK- 84
           +A  LF+RM  RD +S+NSM+DG +K G +D A+ LFD MP  K+++++W +MI GY + 
Sbjct: 175 YARQLFDRMSMRDSVSYNSMIDGYIKRGMIDLAKELFDVMPLEKKNLITWNSMISGYTQL 234

Query: 83  SGRVDVARVLFDEMPERDVVAYNSMM 6
              + +A  LF++MP+RD++++NSM+
Sbjct: 235 KDGMGLALGLFEKMPDRDLISWNSMI 260



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 31/74 (41%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           DL   N ++   ++CG +  A+ LFD+M  RD VS+ +MIDGY K G +D+A+ LFD MP
Sbjct: 156 DLFLQNCLISYYLRCGFIGYARQLFDRMSMRDSVSYNSMIDGYIKRGMIDLAKELFDVMP 215

Query: 38  --ERDVVAYNSMMA 3
             +++++ +NSM++
Sbjct: 216 LEKKNLITWNSMIS 229


>ref|XP_010098917.1| hypothetical protein L484_025573 [Morus notabilis]
           gi|587887479|gb|EXB76219.1| hypothetical protein
           L484_025573 [Morus notabilis]
          Length = 626

 Score =  213 bits (541), Expect = 6e-53
 Identities = 101/146 (69%), Positives = 126/146 (86%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           QVFD M+ RDSVSYNSMIDGYVK G +D A ELFD MP+ E+NL+TWNSM++GYAQ  S 
Sbjct: 172 QVFDGMQKRDSVSYNSMIDGYVKCGMIDLARELFDCMPLEEKNLVTWNSMISGYAQ--SD 229

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           L+FAW LFE MPERD +SWN+M++G VK GK++DA++LF++MPKRD+VSWAN+IDGY+K 
Sbjct: 230 LEFAWELFETMPERDSVSWNTMINGYVKRGKIEDARSLFNRMPKRDIVSWANLIDGYSKL 289

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           GR+ VAR LF+EMP+RDVVA N+MMA
Sbjct: 290 GRIHVARSLFNEMPDRDVVACNAMMA 315



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
 Frame = -3

Query: 269 RSGLQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGY 90
           + GLQ    L +     DL   N ++   ++CG ++ A+ +FD M KRD VS+ +MIDGY
Sbjct: 133 KEGLQIHGLLKKMEIGSDLYLQNGLVSWYLRCGCVEFARQVFDGMQKRDSVSYNSMIDGY 192

Query: 89  AKSGRVDVARVLFDEMP--ERDVVAYNSMMA 3
            K G +D+AR LFD MP  E+++V +NSM++
Sbjct: 193 VKCGMIDLARELFDCMPLEEKNLVTWNSMIS 223


>ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508704332|gb|EOX96228.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 637

 Score =  213 bits (541), Expect = 6e-53
 Identities = 102/145 (70%), Positives = 121/145 (83%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           Q+FD+M  RDSVSYNSMIDGY+K G +  A ELF+ MPM ++NLITWNSM++GYAQ   G
Sbjct: 178 QLFDRMCRRDSVSYNSMIDGYIKTGMIHLARELFEFMPMEDKNLITWNSMISGYAQLEYG 237

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           +  A  LFE MP+RDLISWNSM++G VKCG M+DAQALF KMPKRDVVSWANMI+GYAK 
Sbjct: 238 MVMALKLFEEMPDRDLISWNSMINGFVKCGNMEDAQALFVKMPKRDVVSWANMINGYAKV 297

Query: 80  GRVDVARVLFDEMPERDVVAYNSMM 6
           G++D+AR LFDEMPERDVV  N+MM
Sbjct: 298 GKIDLARRLFDEMPERDVVVCNAMM 322



 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 49/140 (35%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           ++F++M  RD +S+NSMI+G+VK GNM+ A  LF  MP  +R++++W +M+NGYA+    
Sbjct: 243 KLFEEMPDRDLISWNSMINGFVKCGNMEDAQALFVKMP--KRDVVSWANMINGYAKVGK- 299

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWAN-----MID 96
           +  A  LF+ MPERD++  N+M+ G V+ G   +A  +F  + + D +   N     ++ 
Sbjct: 300 IDLARRLFDEMPERDVVVCNAMMGGYVQNGYCSEALEIFYHLQRYDNLQPDNATLLIVLS 359

Query: 95  GYAKSGRVDVARVLFDEMPE 36
             A+ GR+D    +   + E
Sbjct: 360 AIAQLGRIDKGLAIHQYLEE 379



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 30/74 (40%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           DL   N ++   ++CG +  A+ LFD+M +RD VS+ +MIDGY K+G + +AR LF+ MP
Sbjct: 156 DLFLQNCLISLYIRCGFVGYARQLFDRMCRRDSVSYNSMIDGYIKTGMIHLARELFEFMP 215

Query: 38  --ERDVVAYNSMMA 3
             +++++ +NSM++
Sbjct: 216 MEDKNLITWNSMIS 229


>gb|AKH05198.1| chlororespiratory reduction 4 [Pelargonium transvaalense]
          Length = 638

 Score =  212 bits (539), Expect = 1e-52
 Identities = 97/146 (66%), Positives = 119/146 (81%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           QVF +M   DSVSYN+MIDGYVK G +DSA  LFD MP+ ++NL +WNSM+ GYAQ   G
Sbjct: 179 QVFSRMEKLDSVSYNTMIDGYVKCGMIDSARLLFDRMPLEDKNLNSWNSMICGYAQSEDG 238

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           LQ AW LF+ MP+RDL+SWNSM+DGC+KCGKM+DA  LFD+MPKRDVVSWA+MIDGYAK 
Sbjct: 239 LQVAWELFDNMPQRDLVSWNSMIDGCIKCGKMEDASHLFDRMPKRDVVSWASMIDGYAKL 298

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           G V++A  +F +MP RDV+A N+MMA
Sbjct: 299 GSVEIAAAMFKQMPNRDVIACNAMMA 324



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 61/185 (32%), Positives = 98/185 (52%), Gaps = 40/185 (21%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           ++FD M  RD VS+NSMIDG +K G M+ A  LFD MP  +R++++W SM++GYA+  S 
Sbjct: 244 ELFDNMPQRDLVSWNSMIDGCIKCGKMEDASHLFDRMP--KRDVVSWASMIDGYAKLGS- 300

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMP-----KRDVVSW----- 111
           ++ A  +F++MP RD+I+ N+M+ G ++     +A A+FD M      K D  +      
Sbjct: 301 VEIAAAMFKQMPNRDVIACNAMMAGYLQNRFFMEALAVFDYMIGECNLKPDATTLLIVLS 360

Query: 110 -------------------AN-----------MIDGYAKSGRVDVARVLFDEMPERDVVA 21
                              AN           +ID Y+K G ++ A  +F  + E+DV  
Sbjct: 361 AIAQLGYLDEGRNIHGYIEANRISLGGKLGVALIDMYSKCGSIEDAMSVFGNIEEKDVDH 420

Query: 20  YNSMM 6
           +N+M+
Sbjct: 421 WNAMI 425



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
 Frame = -3

Query: 416 RDSVSYNSMIDGYV--KKGNMDSALELFDSM-----PMRERNLITWNSMLNGYAQWRSGL 258
           RD   +N +I  Y    +  +  AL LF  M     P+   +        +  A  + G+
Sbjct: 84  RDPFLWNLIIKSYSHGSQPTITKALTLFSHMLHNGVPVDRFSFSLALKACSRAALLKEGM 143

Query: 257 QFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSG 78
           Q    L + +   DL   N ++   ++CG ++ A  +F +M K D VS+  MIDGY K G
Sbjct: 144 QIHGFLAKLLIGSDLFLQNCLISCYLRCGCLELAHQVFSRMEKLDSVSYNTMIDGYVKCG 203

Query: 77  RVDVARVLFDEMP--ERDVVAYNSMM 6
            +D AR+LFD MP  ++++ ++NSM+
Sbjct: 204 MIDSARLLFDRMPLEDKNLNSWNSMI 229


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Cucumis sativus]
           gi|700201470|gb|KGN56603.1| hypothetical protein
           Csa_3G126180 [Cucumis sativus]
          Length = 638

 Score =  211 bits (536), Expect = 2e-52
 Identities = 95/146 (65%), Positives = 124/146 (84%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           QVFD+M I+DSVSYNSMIDGYVK G +D A ELFDSMP+ ++NLI+WNSML G+AQ + G
Sbjct: 181 QVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDG 240

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           +  A  LFE+MPERDL+SWN+++ G  KCG+++ A +LF++MPKRDV+SW+NMIDGYAK 
Sbjct: 241 IGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKL 300

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           G + VAR LFDEMP++DVVA+N++MA
Sbjct: 301 GDIKVARTLFDEMPDKDVVAFNTIMA 326



 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 47/186 (25%), Positives = 99/186 (53%), Gaps = 40/186 (21%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           ++F+KM  RD VS+N++I G+ K G ++ A  LF+ MP  +R++I+W++M++GYA+    
Sbjct: 246 ELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMP--KRDVISWSNMIDGYAKL-GD 302

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVS----------- 114
           ++ A  LF+ MP++D++++N+++ G  + G   +A  +F +M ++  +S           
Sbjct: 303 IKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALS 362

Query: 113 -----------------------------WANMIDGYAKSGRVDVARVLFDEMPERDVVA 21
                                           +ID Y+K G ++ A ++FD + ++ +  
Sbjct: 363 AISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDH 422

Query: 20  YNSMMA 3
           +N+M++
Sbjct: 423 WNAMIS 428



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 31/73 (42%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           +L   N ++   ++CG ++ A+ +FD+MP +D VS+ +MIDGY KSG +D+AR LFD MP
Sbjct: 159 NLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMP 218

Query: 38  --ERDVVAYNSMM 6
             +++++++NSM+
Sbjct: 219 LEDKNLISWNSML 231


>ref|XP_008438168.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Cucumis melo]
          Length = 638

 Score =  210 bits (534), Expect = 4e-52
 Identities = 95/146 (65%), Positives = 123/146 (84%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           QVFD M ++DSVSYNSMIDGYVK G +D A ELFDSMP+ ++NLI+WNSML G+AQ + G
Sbjct: 181 QVFDTMPVQDSVSYNSMIDGYVKSGTIDLARELFDSMPLGDKNLISWNSMLGGFAQTKDG 240

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           +  A  LFE+MPERDL+SWN+++ G  KCG+++ A +LF++MPKRDV+SW+NMIDGYAK 
Sbjct: 241 IGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKL 300

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           G + VAR LFDEMP++DVVA+N+MMA
Sbjct: 301 GDIKVARTLFDEMPDKDVVAFNTMMA 326



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 49/186 (26%), Positives = 100/186 (53%), Gaps = 40/186 (21%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           ++F+KM  RD VS+N++I G+ K G ++ A  LF+ MP  +R++I+W++M++GYA+    
Sbjct: 246 ELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMP--KRDVISWSNMIDGYAKL-GD 302

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVS----------- 114
           ++ A  LF+ MP++D++++N+M+ G  + G   +A  +F KM ++  +S           
Sbjct: 303 IKVARTLFDEMPDKDVVAFNTMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLVVALS 362

Query: 113 -----------------------------WANMIDGYAKSGRVDVARVLFDEMPERDVVA 21
                                           +ID Y+K G ++ A+++FD + ++ +  
Sbjct: 363 AISQLGHIEKAASMHNYFVENGISVTGKVAVALIDMYSKCGSIENAKLIFDGVDQKGIDH 422

Query: 20  YNSMMA 3
           +N+M++
Sbjct: 423 WNAMIS 428



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 31/73 (42%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           +L   N ++   ++CG ++ A+ +FD MP +D VS+ +MIDGY KSG +D+AR LFD MP
Sbjct: 159 NLFLLNCLIAMYLRCGDIEFARQVFDTMPVQDSVSYNSMIDGYVKSGTIDLARELFDSMP 218

Query: 38  --ERDVVAYNSMM 6
             +++++++NSM+
Sbjct: 219 LGDKNLISWNSML 231


>gb|AKH05197.1| chlororespiratory reduction 4 [Pelargonium tetragonum]
          Length = 643

 Score =  207 bits (527), Expect = 3e-51
 Identities = 95/146 (65%), Positives = 120/146 (82%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           +VF +M   DSVSYNSMIDGYVK G +DSA  LFD +P+ ++NL +WNSM+ GYAQ   G
Sbjct: 180 RVFSRMEKLDSVSYNSMIDGYVKCGMIDSARLLFDRIPLDDKNLNSWNSMICGYAQSEDG 239

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           L+ AW LF+ MPERDL+SWNSM+DGC+KCGKM++A+ LFD+MPKRDVVSWA+MIDGYAK 
Sbjct: 240 LKVAWELFDNMPERDLVSWNSMIDGCIKCGKMENARHLFDRMPKRDVVSWASMIDGYAKL 299

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           G V++A  +F +MP RDV+A N+MMA
Sbjct: 300 GSVEIAAAMFKQMPNRDVIACNAMMA 325



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
 Frame = -3

Query: 413 DSVSYNSMIDGYVKKGNMDSALELFDSM-----PMRERNLITWNSMLNGYAQWRSGLQFA 249
           D   +N +I  Y        AL LF  M     P+   ++       +     + G+Q  
Sbjct: 88  DPFLWNLIIKSYSHGSQPIKALTLFSDMLQNGVPVDRFSISLVLKACSRLGLLKEGMQIH 147

Query: 248 WHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVD 69
             L +     DL   N ++   ++CG ++ A  +F +M K D VS+ +MIDGY K G +D
Sbjct: 148 GFLAKLQIGSDLFLQNCLISWYLRCGCLELAHRVFSRMEKLDSVSYNSMIDGYVKCGMID 207

Query: 68  VARVLFDEMP--ERDVVAYNSMM 6
            AR+LFD +P  ++++ ++NSM+
Sbjct: 208 SARLLFDRIPLDDKNLNSWNSMI 230


>gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
          Length = 615

 Score =  207 bits (527), Expect = 3e-51
 Identities = 99/146 (67%), Positives = 122/146 (83%)
 Frame = -3

Query: 440 QVFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSG 261
           QVFD+M  RDSVSYNSMIDGYVK G ++SA ELFD MP  ++NLI+WNSM+NGYAQ   G
Sbjct: 179 QVFDRMSQRDSVSYNSMIDGYVKCGLIESARELFDLMPSEKKNLISWNSMINGYAQRADG 238

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKS 81
           +  A +LF+ MPE+DLISWNS++DG VK G+++DA+ LFDKMP+RDVV+WA M+DGYAK 
Sbjct: 239 VDIASNLFDEMPEKDLISWNSLIDGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKL 298

Query: 80  GRVDVARVLFDEMPERDVVAYNSMMA 3
           G V  A+ LFD+MP+RDVVAYNSMMA
Sbjct: 299 GFVHQAKSLFDQMPQRDVVAYNSMMA 324



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 45/88 (51%), Positives = 70/88 (79%), Gaps = 3/88 (3%)
 Frame = -3

Query: 260 LQFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMP--KRDVVSWANMIDGYA 87
           L FA  +F+RM +RD +S+NSM+DG VKCG ++ A+ LFD MP  K++++SW +MI+GYA
Sbjct: 174 LGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIESARELFDLMPSEKKNLISWNSMINGYA 233

Query: 86  -KSGRVDVARVLFDEMPERDVVAYNSMM 6
            ++  VD+A  LFDEMPE+D++++NS++
Sbjct: 234 QRADGVDIASNLFDEMPEKDLISWNSLI 261



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 49/130 (37%), Positives = 82/130 (63%), Gaps = 5/130 (3%)
 Frame = -3

Query: 437 VFDKMRIRDSVSYNSMIDGYVKKGNMDSALELFDSMPMRERNLITWNSMLNGYAQWRSGL 258
           +FD+M  +D +S+NS+IDGYVK G ++ A +LFD MP R+  ++TW +M++GYA+     
Sbjct: 245 LFDEMPEKDLISWNSLIDGYVKHGRIEDAKDLFDKMPRRD--VVTWATMVDGYAKLGFVH 302

Query: 257 QFAWHLFERMPERDLISWNSMLDGCVKCGKMDDAQALFDKMPKR-----DVVSWANMIDG 93
           Q A  LF++MP+RD++++NSM+ G V+     +A  +F+ M K      D  +   ++  
Sbjct: 303 Q-AKSLFDQMPQRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSA 361

Query: 92  YAKSGRVDVA 63
            A+ GR+  A
Sbjct: 362 IAQLGRLSKA 371



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 31/73 (42%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = -3

Query: 218 DLISWNSMLDGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKSGRVDVARVLFDEMP 39
           DL   N ++   +KCG +  A+ +FD+M +RD VS+ +MIDGY K G ++ AR LFD MP
Sbjct: 157 DLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIESARELFDLMP 216

Query: 38  --ERDVVAYNSMM 6
             +++++++NSM+
Sbjct: 217 SEKKNLISWNSMI 229