BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00028151
         (1118 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sin...   434   e-119
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   434   e-119
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...   434   e-119
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...   356   2e-95
ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   341   7e-91
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   341   7e-91
ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III s...   340   1e-90
ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III s...   340   1e-90
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...   330   1e-87
ref|XP_011005565.1| PREDICTED: DNA-directed RNA polymerase III s...   323   1e-85
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              323   1e-85
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   323   1e-85
ref|XP_010033188.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   321   6e-85
gb|KCW52758.1| hypothetical protein EUGRSUZ_J02108 [Eucalyptus g...   321   6e-85
gb|KCW52757.1| hypothetical protein EUGRSUZ_J02108 [Eucalyptus g...   321   6e-85
ref|XP_010092991.1| DNA-directed RNA polymerase III subunit RPC1...   321   8e-85
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...   318   4e-84
ref|XP_012064930.1| PREDICTED: DNA-directed RNA polymerase III s...   316   3e-83
gb|KDP44150.1| hypothetical protein JCGZ_05617 [Jatropha curcas]      316   3e-83
ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s...   313   2e-82

>gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sinensis]
            gi|641854233|gb|KDO73041.1| hypothetical protein
            CISIN_1g000828mg [Citrus sinensis]
          Length = 1265

 Score =  434 bits (1116), Expect = e-119
 Identities = 226/260 (86%), Positives = 232/260 (89%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDMETI DAHL INADIVKESI+QTPKIKLKQQHIKVLDFRKLEIFPPVDK+KIHFEL+
Sbjct: 1006 ALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFELY 1065

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
            SLKNVLPMVIVKGIKT                       KYRLLVEGTGLQAVMGAEGID
Sbjct: 1066 SLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGID 1125

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSID RHMMLLADLMTFRGEVLG
Sbjct: 1126 GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLG 1185

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILK+
Sbjct: 1186 ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKI 1245

Query: 398  RQRDAVPTMLRYEAPDPIMS 339
            RQRDAVP ML+Y APDPIMS
Sbjct: 1246 RQRDAVPPMLKYGAPDPIMS 1265


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score =  434 bits (1116), Expect = e-119
 Identities = 226/260 (86%), Positives = 232/260 (89%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDMETI DAHL INADIVKESI+QTPKIKLKQQHIKVLDFRKLEIFPPVDK+KIHFEL+
Sbjct: 1145 ALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFELY 1204

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
            SLKNVLPMVIVKGIKT                       KYRLLVEGTGLQAVMGAEGID
Sbjct: 1205 SLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGID 1264

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSID RHMMLLADLMTFRGEVLG
Sbjct: 1265 GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLG 1324

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILK+
Sbjct: 1325 ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKI 1384

Query: 398  RQRDAVPTMLRYEAPDPIMS 339
            RQRDAVP ML+Y APDPIMS
Sbjct: 1385 RQRDAVPPMLKYGAPDPIMS 1404


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score =  434 bits (1116), Expect = e-119
 Identities = 226/260 (86%), Positives = 232/260 (89%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDMETI DAHL INADIVKESI+QTPKIKLKQQHIKVLDFRKLEIFPPVDK+KIHFEL+
Sbjct: 1138 ALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFELY 1197

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
            SLKNVLPMVIVKGIKT                       KYRLLVEGTGLQAVMGAEGID
Sbjct: 1198 SLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGID 1257

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSID RHMMLLADLMTFRGEVLG
Sbjct: 1258 GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLG 1317

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILK+
Sbjct: 1318 ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKI 1377

Query: 398  RQRDAVPTMLRYEAPDPIMS 339
            RQRDAVP ML+Y APDPIMS
Sbjct: 1378 RQRDAVPPMLKYGAPDPIMS 1397


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
            gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
            [Theobroma cacao]
          Length = 1395

 Score =  356 bits (913), Expect = 2e-95
 Identities = 183/260 (70%), Positives = 213/260 (81%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDME ILDA L I+A+IVKESILQTPKIKLK+QH+KVLD RKLE+ PP D+++IHFELH
Sbjct: 1137 TLDMEIILDAELYIDANIVKESILQTPKIKLKEQHVKVLDGRKLEVVPPADRSQIHFELH 1196

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
            SLKN+LP+V+VKGIKT                        ++LLVEGTGLQAVMG EGID
Sbjct: 1197 SLKNLLPLVVVKGIKTVERTVVYDKNKEKKNQKEEETTKHFQLLVEGTGLQAVMGIEGID 1256

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            G +T SNH+ E++Q LGIEAAR CIIDEI +TM+ HGM+ID RHMMLLAD+MTFRGEVLG
Sbjct: 1257 GRRTWSNHVMEMEQILGIEAARKCIIDEIAQTMEHHGMTIDRRHMMLLADVMTFRGEVLG 1316

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKS+LMLASFE+TADHLFNA+VNGRDD+IEGV+ECIIMGIPM +GTGILKV
Sbjct: 1317 ITRFGIQKMDKSILMLASFERTADHLFNAAVNGRDDKIEGVTECIIMGIPMQIGTGILKV 1376

Query: 398  RQRDAVPTMLRYEAPDPIMS 339
             QR   P MLRY  PDP++S
Sbjct: 1377 IQRVDPPPMLRY-GPDPVLS 1395


>ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit rpc1 [Cucumis melo]
          Length = 1400

 Score =  341 bits (874), Expect = 7e-91
 Identities = 178/255 (69%), Positives = 200/255 (78%), Gaps = 1/255 (0%)
 Frame = -1

Query: 1115 LDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPP-VDKNKIHFELH 939
            LDME I DA L ++A++VK++IL TPK+KLK +HI VLD RKL + P   D+NK+HF LH
Sbjct: 1148 LDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLH 1207

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
             LKN+LP V+VKGIKT                        + LLVEGTGLQAVMG EG+D
Sbjct: 1208 FLKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKK------FSLLVEGTGLQAVMGTEGVD 1261

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            GC TKSNHI EVQQ LGIEAAR CII+EI  TM++HGMSIDIRHMMLL DLMTFRGEVLG
Sbjct: 1262 GCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLG 1321

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDD+IEGVSEC+IMGIPMPLGTG+LKV
Sbjct: 1322 ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKV 1381

Query: 398  RQRDAVPTMLRYEAP 354
            RQR +VP  L Y  P
Sbjct: 1382 RQRVSVPRQLPYGPP 1396


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Cucumis
            sativus]
          Length = 1400

 Score =  341 bits (874), Expect = 7e-91
 Identities = 178/255 (69%), Positives = 200/255 (78%), Gaps = 1/255 (0%)
 Frame = -1

Query: 1115 LDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPP-VDKNKIHFELH 939
            LDME I DA L ++A++VK++IL TPK+KLK +HI VLD RKL + P   D+NK+HF LH
Sbjct: 1148 LDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLH 1207

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
             LKN+LP V+VKGIKT                        + LLVEGTGLQAVMG EG+D
Sbjct: 1208 FLKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKK------FSLLVEGTGLQAVMGTEGVD 1261

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            GC TKSNHI EVQQ LGIEAAR CII+EI  TM++HGMSIDIRHMMLL DLMTFRGEVLG
Sbjct: 1262 GCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLG 1321

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDD+IEGVSEC+IMGIPMPLGTG+LKV
Sbjct: 1322 ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKV 1381

Query: 398  RQRDAVPTMLRYEAP 354
            RQR +VP  L Y  P
Sbjct: 1382 RQRVSVPQQLPYGPP 1396


>ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Gossypium raimondii]
          Length = 1395

 Score =  340 bits (873), Expect = 1e-90
 Identities = 178/260 (68%), Positives = 205/260 (78%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            SLDME I DA L I+A++VKESILQTPK+KLK+QH+KVLD +KLE+ PP D+++IHFELH
Sbjct: 1138 SLDMERIQDAQLHIDANVVKESILQTPKLKLKEQHVKVLDVKKLEVVPPADRSRIHFELH 1197

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
            SLKN+LP+V+VKGIKT                        Y+L VEG GLQ VMG EGID
Sbjct: 1198 SLKNLLPLVVVKGIKTVERVVIAEKKKDNKSQNKEAKKL-YQLFVEGMGLQTVMGVEGID 1256

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            G KT SNH+ E+ Q LGIEAAR CII+EI  TM +HGMSIDIRHMMLL D+MTFRGEVLG
Sbjct: 1257 GRKTMSNHVMEMLQILGIEAARSCIINEIAATMASHGMSIDIRHMMLLGDVMTFRGEVLG 1316

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKS+LMLASFEKT DHLFNASVNGRDD+IEGV+ECIIMGIPM LGTGILKV
Sbjct: 1317 ITRFGIQKMDKSILMLASFEKTGDHLFNASVNGRDDKIEGVTECIIMGIPMQLGTGILKV 1376

Query: 398  RQRDAVPTMLRYEAPDPIMS 339
             QR     +L+Y A DP++S
Sbjct: 1377 MQRVDPLPLLQYGA-DPVLS 1395


>ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Gossypium raimondii] gi|763752836|gb|KJB20224.1|
            hypothetical protein B456_003G139100 [Gossypium
            raimondii]
          Length = 1398

 Score =  340 bits (873), Expect = 1e-90
 Identities = 178/260 (68%), Positives = 205/260 (78%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            SLDME I DA L I+A++VKESILQTPK+KLK+QH+KVLD +KLE+ PP D+++IHFELH
Sbjct: 1141 SLDMERIQDAQLHIDANVVKESILQTPKLKLKEQHVKVLDVKKLEVVPPADRSRIHFELH 1200

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
            SLKN+LP+V+VKGIKT                        Y+L VEG GLQ VMG EGID
Sbjct: 1201 SLKNLLPLVVVKGIKTVERVVIAEKKKDNKSQNKEAKKL-YQLFVEGMGLQTVMGVEGID 1259

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            G KT SNH+ E+ Q LGIEAAR CII+EI  TM +HGMSIDIRHMMLL D+MTFRGEVLG
Sbjct: 1260 GRKTMSNHVMEMLQILGIEAARSCIINEIAATMASHGMSIDIRHMMLLGDVMTFRGEVLG 1319

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKS+LMLASFEKT DHLFNASVNGRDD+IEGV+ECIIMGIPM LGTGILKV
Sbjct: 1320 ITRFGIQKMDKSILMLASFEKTGDHLFNASVNGRDDKIEGVTECIIMGIPMQLGTGILKV 1379

Query: 398  RQRDAVPTMLRYEAPDPIMS 339
             QR     +L+Y A DP++S
Sbjct: 1380 MQRVDPLPLLQYGA-DPVLS 1398


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
            communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
            polymerase III largest subunit, putative [Ricinus
            communis]
          Length = 1383

 Score =  330 bits (846), Expect = 1e-87
 Identities = 172/260 (66%), Positives = 204/260 (78%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDM+TI +A L ++A+IVKE+IL+TP+IKLK QHIKVLD RKLE+ P  D+ ++HFELH
Sbjct: 1127 TLDMKTIQNAQLSLDANIVKEAILRTPRIKLKPQHIKVLDTRKLEVIPLGDRERVHFELH 1186

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
            +LKN+LP +IV+GIKT                        Y +LVEG GL  VMG EG+D
Sbjct: 1187 NLKNLLPSIIVQGIKTVERAVIAQKKHDGKANDQELPT--YNMLVEGMGLDLVMGTEGVD 1244

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            GCKT SNH+ EVQ+ LGIEAAR CIIDEIN+TM+ HGMSIDIRHMMLL DLMTF+GEVLG
Sbjct: 1245 GCKTTSNHVMEVQKFLGIEAARKCIIDEINQTMEHHGMSIDIRHMMLLGDLMTFKGEVLG 1304

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKSVLMLASFEKTADHL++A+V GRDD+IEGVSECIIMGIPM +GTGILKV
Sbjct: 1305 ITRFGIQKMDKSVLMLASFEKTADHLYHAAVFGRDDKIEGVSECIIMGIPMQIGTGILKV 1364

Query: 398  RQRDAVPTMLRYEAPDPIMS 339
            +QR   P +L Y   D I+S
Sbjct: 1365 QQRVDPPPVLNY-GSDSIIS 1383


>ref|XP_011005565.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Populus
            euphratica]
          Length = 1410

 Score =  323 bits (829), Expect = 1e-85
 Identities = 172/260 (66%), Positives = 202/260 (77%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDM+TI +A L ++A+IV+E IL+TPKIK K Q I VL+  KLE+FP  D+NK+HFELH
Sbjct: 1154 TLDMKTIREAQLSLDANIVRELILETPKIKRKLQRINVLEDGKLEVFPGGDRNKLHFELH 1213

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
            SLKN+LP V+VKGIKT                        Y + VEGTGLQAVMG +G+D
Sbjct: 1214 SLKNMLPAVVVKGIKTVERVVIAQKKLDDAENDQGGPK--YNMFVEGTGLQAVMGTDGVD 1271

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            G KTKSNHI EVQ+TLGIEAAR CIIDEI  TM++HGMSIDIRHMMLLAD+MT RG VLG
Sbjct: 1272 GRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESHGMSIDIRHMMLLADVMTSRGVVLG 1331

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKSVLMLASFEKT+DHLFNASV G+DD+IEGVSECIIMGIP+ +GTG+LK+
Sbjct: 1332 ITRFGIQKMDKSVLMLASFEKTSDHLFNASVKGKDDKIEGVSECIIMGIPVAIGTGVLKI 1391

Query: 398  RQRDAVPTMLRYEAPDPIMS 339
            +QR     ML Y   DPI+S
Sbjct: 1392 QQRVDPLPMLDY-GLDPIIS 1410


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  323 bits (829), Expect = 1e-85
 Identities = 178/260 (68%), Positives = 200/260 (76%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDME I  + L I+++IV+ESIL+  +IKLKQQHIKVLD  KLE+ P  D++ IHFELH
Sbjct: 1572 ALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELH 1631

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
            +LKN+LP V+VKGI+T                        Y LLVEGTGLQ VMG EG+ 
Sbjct: 1632 ALKNLLPTVVVKGIETVERAVINKDNKVK-----------YNLLVEGTGLQTVMGTEGVI 1680

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            G +T SNHI EVQQTLGIEAAR CII+EI  TM +HGMSIDIRHMMLLADLMTFRGEVLG
Sbjct: 1681 GRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLG 1740

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKSVLMLASFEKTADHLFNASV+GRDD+IEGVSECIIMGIPM LGTGILKV
Sbjct: 1741 ITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKV 1800

Query: 398  RQRDAVPTMLRYEAPDPIMS 339
            RQR      L Y   DPI+S
Sbjct: 1801 RQRLQQVPELSY-GLDPIIS 1819


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Vitis
            vinifera]
          Length = 1383

 Score =  323 bits (829), Expect = 1e-85
 Identities = 178/260 (68%), Positives = 200/260 (76%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDME I  + L I+++IV+ESIL+  +IKLKQQHIKVLD  KLE+ P  D++ IHFELH
Sbjct: 1136 ALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELH 1195

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
            +LKN+LP V+VKGI+T                        Y LLVEGTGLQ VMG EG+ 
Sbjct: 1196 ALKNLLPTVVVKGIETVERAVINKDNKVK-----------YNLLVEGTGLQTVMGTEGVI 1244

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            G +T SNHI EVQQTLGIEAAR CII+EI  TM +HGMSIDIRHMMLLADLMTFRGEVLG
Sbjct: 1245 GRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLG 1304

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKSVLMLASFEKTADHLFNASV+GRDD+IEGVSECIIMGIPM LGTGILKV
Sbjct: 1305 ITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKV 1364

Query: 398  RQRDAVPTMLRYEAPDPIMS 339
            RQR      L Y   DPI+S
Sbjct: 1365 RQRLQQVPELSY-GLDPIIS 1383


>ref|XP_010033188.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit rpc1 [Eucalyptus grandis]
          Length = 1402

 Score =  321 bits (823), Expect = 6e-85
 Identities = 175/261 (67%), Positives = 198/261 (75%), Gaps = 1/261 (0%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDM  I D+ L I+A+ V+ESI+QTPKIK KQ  I VLD  KLE+ P VD+ K+HFELH
Sbjct: 1142 TLDMNRIEDSQLCIDANTVRESIMQTPKIKPKQLQINVLDVTKLEVVPLVDRGKLHFELH 1201

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXK-YRLLVEGTGLQAVMGAEGI 762
            SLKN+LP VIVKGIKT                       + Y L+VEGTGLQ VMG EG+
Sbjct: 1202 SLKNMLPNVIVKGIKTVERAVVNKGKEKYKDKEGKVKEREKYSLVVEGTGLQEVMGTEGV 1261

Query: 761  DGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVL 582
            DG KTKSNHI E+QQTLGIEAAR CII+EI   M  HGMSIDIRHMMLLADLMTFRGEVL
Sbjct: 1262 DGRKTKSNHIIEIQQTLGIEAARWCIIEEIQFIMSNHGMSIDIRHMMLLADLMTFRGEVL 1321

Query: 581  GITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILK 402
            GITRFGIQKMDKSVLMLASFEKT+DHLF+AS +G+ D+IEGVSECIIMG+PM LGTGILK
Sbjct: 1322 GITRFGIQKMDKSVLMLASFEKTSDHLFHASASGKADKIEGVSECIIMGVPMQLGTGILK 1381

Query: 401  VRQRDAVPTMLRYEAPDPIMS 339
            V QRD  P +    A DPI+S
Sbjct: 1382 VIQRDEKPELT--YASDPIIS 1400


>gb|KCW52758.1| hypothetical protein EUGRSUZ_J02108 [Eucalyptus grandis]
          Length = 1084

 Score =  321 bits (823), Expect = 6e-85
 Identities = 175/261 (67%), Positives = 198/261 (75%), Gaps = 1/261 (0%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDM  I D+ L I+A+ V+ESI+QTPKIK KQ  I VLD  KLE+ P VD+ K+HFELH
Sbjct: 824  TLDMNRIEDSQLCIDANTVRESIMQTPKIKPKQLQINVLDVTKLEVVPLVDRGKLHFELH 883

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXK-YRLLVEGTGLQAVMGAEGI 762
            SLKN+LP VIVKGIKT                       + Y L+VEGTGLQ VMG EG+
Sbjct: 884  SLKNMLPNVIVKGIKTVERAVVNKGKEKYKDKEGKVKEREKYSLVVEGTGLQEVMGTEGV 943

Query: 761  DGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVL 582
            DG KTKSNHI E+QQTLGIEAAR CII+EI   M  HGMSIDIRHMMLLADLMTFRGEVL
Sbjct: 944  DGRKTKSNHIIEIQQTLGIEAARWCIIEEIQFIMSNHGMSIDIRHMMLLADLMTFRGEVL 1003

Query: 581  GITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILK 402
            GITRFGIQKMDKSVLMLASFEKT+DHLF+AS +G+ D+IEGVSECIIMG+PM LGTGILK
Sbjct: 1004 GITRFGIQKMDKSVLMLASFEKTSDHLFHASASGKADKIEGVSECIIMGVPMQLGTGILK 1063

Query: 401  VRQRDAVPTMLRYEAPDPIMS 339
            V QRD  P +    A DPI+S
Sbjct: 1064 VIQRDEKPELT--YASDPIIS 1082


>gb|KCW52757.1| hypothetical protein EUGRSUZ_J02108 [Eucalyptus grandis]
          Length = 1184

 Score =  321 bits (823), Expect = 6e-85
 Identities = 175/261 (67%), Positives = 198/261 (75%), Gaps = 1/261 (0%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDM  I D+ L I+A+ V+ESI+QTPKIK KQ  I VLD  KLE+ P VD+ K+HFELH
Sbjct: 924  TLDMNRIEDSQLCIDANTVRESIMQTPKIKPKQLQINVLDVTKLEVVPLVDRGKLHFELH 983

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXK-YRLLVEGTGLQAVMGAEGI 762
            SLKN+LP VIVKGIKT                       + Y L+VEGTGLQ VMG EG+
Sbjct: 984  SLKNMLPNVIVKGIKTVERAVVNKGKEKYKDKEGKVKEREKYSLVVEGTGLQEVMGTEGV 1043

Query: 761  DGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVL 582
            DG KTKSNHI E+QQTLGIEAAR CII+EI   M  HGMSIDIRHMMLLADLMTFRGEVL
Sbjct: 1044 DGRKTKSNHIIEIQQTLGIEAARWCIIEEIQFIMSNHGMSIDIRHMMLLADLMTFRGEVL 1103

Query: 581  GITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILK 402
            GITRFGIQKMDKSVLMLASFEKT+DHLF+AS +G+ D+IEGVSECIIMG+PM LGTGILK
Sbjct: 1104 GITRFGIQKMDKSVLMLASFEKTSDHLFHASASGKADKIEGVSECIIMGVPMQLGTGILK 1163

Query: 401  VRQRDAVPTMLRYEAPDPIMS 339
            V QRD  P +    A DPI+S
Sbjct: 1164 VIQRDEKPELT--YASDPIIS 1182


>ref|XP_010092991.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
            gi|587863463|gb|EXB53229.1| DNA-directed RNA polymerase
            III subunit RPC1 [Morus notabilis]
          Length = 1179

 Score =  321 bits (822), Expect = 8e-85
 Identities = 172/261 (65%), Positives = 202/261 (77%), Gaps = 1/261 (0%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFP-PVDKNKIHFEL 942
            +LDME I DA L I+A++V++SILQTP+IKLK++HI+VLDF+KLEI P   +++K++  L
Sbjct: 924  TLDMERIQDALLSIDANVVRDSILQTPRIKLKKEHIRVLDFKKLEILPYESNRSKLYHHL 983

Query: 941  HSLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGI 762
              L  +L  ++VKGIKT                        Y+LLVEGTGL  VMG EG+
Sbjct: 984  QFLAKMLQNILVKGIKTVERAVISSEKDKKTDISKK-----YKLLVEGTGLLGVMGTEGV 1038

Query: 761  DGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVL 582
            DG  TK+NHI EVQQTLGIEAAR CIIDEI  TMK+HGMSID RHMMLLAD+MT RGEVL
Sbjct: 1039 DGRNTKTNHIIEVQQTLGIEAARTCIIDEIEYTMKSHGMSIDTRHMMLLADVMTSRGEVL 1098

Query: 581  GITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILK 402
            GITRFGIQKMDKSVLMLASFEKTADHLFNASVNGR+D+IEGVSECIIMGIPM +GTG++K
Sbjct: 1099 GITRFGIQKMDKSVLMLASFEKTADHLFNASVNGREDKIEGVSECIIMGIPMQIGTGMIK 1158

Query: 401  VRQRDAVPTMLRYEAPDPIMS 339
            VRQR  VP ML Y  P PI+S
Sbjct: 1159 VRQRVDVPPMLSY-GPKPILS 1178


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1394

 Score =  318 bits (816), Expect = 4e-84
 Identities = 165/243 (67%), Positives = 193/243 (79%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDM+TI +A L ++A+IV+E IL+TPKIK K Q I VL+  KLE+FP  D+NK+HFELH
Sbjct: 1154 TLDMKTIREAQLSLDANIVRELILETPKIKRKLQRINVLEDGKLEVFPGGDRNKLHFELH 1213

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
            SLKN+LP V+VKGIKT                        Y + VEG GLQAVMG EG+D
Sbjct: 1214 SLKNMLPAVVVKGIKTVERVVIAQKKLDDAENDQGGPK--YNMFVEGMGLQAVMGTEGVD 1271

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            G KTKSNHI EVQ+TLGIEAAR CIIDEI  TM++HGMSIDIRHMMLLAD+MT RG VLG
Sbjct: 1272 GRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESHGMSIDIRHMMLLADVMTSRGVVLG 1331

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKSVLMLASFEKT+DHLFNASV G+DD+IEGVSECIIMGIP+ +GTG+LK+
Sbjct: 1332 ITRFGIQKMDKSVLMLASFEKTSDHLFNASVKGKDDKIEGVSECIIMGIPVAIGTGVLKI 1391

Query: 398  RQR 390
            +QR
Sbjct: 1392 QQR 1394


>ref|XP_012064930.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Jatropha
            curcas]
          Length = 1413

 Score =  316 bits (809), Expect = 3e-83
 Identities = 167/260 (64%), Positives = 196/260 (75%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDM+TI +A L ++A+ V+ESILQTP+ KLK Q+IKVLD RKLE+ P  D+ K+HFELH
Sbjct: 1157 TLDMKTIQEAQLSLDANTVRESILQTPRTKLKPQNIKVLDIRKLEVIPLGDREKVHFELH 1216

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
            SLKN+LP + VKGIKT                        Y + VEG GLQ VMG EG+D
Sbjct: 1217 SLKNMLPSITVKGIKTVERAVIAQKKREGKASIQELPT--YNMFVEGMGLQEVMGTEGVD 1274

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            G KT SNH+ E+ + LGIEAAR CIIDEI   M+ HGMSID RHMMLLADLMTF+GEVLG
Sbjct: 1275 GRKTTSNHVMEIFKYLGIEAARKCIIDEIKNVMEGHGMSIDTRHMMLLADLMTFKGEVLG 1334

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKSVLMLASFEKT+DHL+ A+V+GRDDRIEGVSECIIMGIPM LGTGILKV
Sbjct: 1335 ITRFGIQKMDKSVLMLASFEKTSDHLYTAAVHGRDDRIEGVSECIIMGIPMRLGTGILKV 1394

Query: 398  RQRDAVPTMLRYEAPDPIMS 339
            +QR   P  +  +  DPIM+
Sbjct: 1395 QQR-VDPRPMLTKGLDPIMA 1413


>gb|KDP44150.1| hypothetical protein JCGZ_05617 [Jatropha curcas]
          Length = 1275

 Score =  316 bits (809), Expect = 3e-83
 Identities = 167/260 (64%), Positives = 196/260 (75%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDM+TI +A L ++A+ V+ESILQTP+ KLK Q+IKVLD RKLE+ P  D+ K+HFELH
Sbjct: 1019 TLDMKTIQEAQLSLDANTVRESILQTPRTKLKPQNIKVLDIRKLEVIPLGDREKVHFELH 1078

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
            SLKN+LP + VKGIKT                        Y + VEG GLQ VMG EG+D
Sbjct: 1079 SLKNMLPSITVKGIKTVERAVIAQKKREGKASIQELPT--YNMFVEGMGLQEVMGTEGVD 1136

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            G KT SNH+ E+ + LGIEAAR CIIDEI   M+ HGMSID RHMMLLADLMTF+GEVLG
Sbjct: 1137 GRKTTSNHVMEIFKYLGIEAARKCIIDEIKNVMEGHGMSIDTRHMMLLADLMTFKGEVLG 1196

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITRFGIQKMDKSVLMLASFEKT+DHL+ A+V+GRDDRIEGVSECIIMGIPM LGTGILKV
Sbjct: 1197 ITRFGIQKMDKSVLMLASFEKTSDHLYTAAVHGRDDRIEGVSECIIMGIPMRLGTGILKV 1256

Query: 398  RQRDAVPTMLRYEAPDPIMS 339
            +QR   P  +  +  DPIM+
Sbjct: 1257 QQR-VDPRPMLTKGLDPIMA 1275


>ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Nicotiana tomentosiformis]
            gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 1375

 Score =  313 bits (802), Expect = 2e-82
 Identities = 164/242 (67%), Positives = 189/242 (78%)
 Frame = -1

Query: 1118 SLDMETILDAHLGINADIVKESILQTPKIKLKQQHIKVLDFRKLEIFPPVDKNKIHFELH 939
            +LDMETI  + L I+A  VK+SILQTPKIKLK+Q +KVL+ RKLE+FP  +K+K+HFELH
Sbjct: 1135 TLDMETIQVSQLCIDAYTVKQSILQTPKIKLKEQQVKVLNHRKLEVFPQANKDKLHFELH 1194

Query: 938  SLKNVLPMVIVKGIKTXXXXXXXXXXXXXXXXXXXXXXXKYRLLVEGTGLQAVMGAEGID 759
             LKN LP+V+VKGI T                        Y LLVEGTGL AVMG +G+D
Sbjct: 1195 RLKNKLPVVVVKGITTVQRAVVNKEQERDRKSDVKGET--YELLVEGTGLLAVMGIDGVD 1252

Query: 758  GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDIRHMMLLADLMTFRGEVLG 579
            G  TKSNHI EVQQ LGIEAARI IIDEIN TM +HGM+ID+RHMMLLADLMT++GEVLG
Sbjct: 1253 GRNTKSNHIMEVQQRLGIEAARISIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLG 1312

Query: 578  ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKV 399
            ITR G+QKM  SVLMLASFEKT DHLFNASVNGRDD+IEGVSECIIMGIPM +GTG+ K+
Sbjct: 1313 ITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKL 1372

Query: 398  RQ 393
            RQ
Sbjct: 1373 RQ 1374