BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00024414
         (464 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO59259.1| hypothetical protein CISIN_1g036340mg [Citrus sin...   273   5e-71
ref|XP_006475400.1| PREDICTED: pentatricopeptide repeat-containi...   273   5e-71
ref|XP_006451414.1| hypothetical protein CICLE_v10007675mg [Citr...   273   5e-71
ref|XP_008358384.1| PREDICTED: pentatricopeptide repeat-containi...   238   2e-60
ref|XP_008358362.1| PREDICTED: pentatricopeptide repeat-containi...   238   2e-60
ref|XP_008236131.1| PREDICTED: pentatricopeptide repeat-containi...   237   3e-60
ref|XP_011458358.1| PREDICTED: pentatricopeptide repeat-containi...   231   2e-58
ref|XP_007199439.1| hypothetical protein PRUPE_ppa026671mg [Prun...   230   3e-58
ref|XP_007041730.1| Mitochondrial editing factor 9 isoform 1 [Th...   223   3e-56
ref|XP_012081794.1| PREDICTED: pentatricopeptide repeat-containi...   219   8e-55
gb|KDP29673.1| hypothetical protein JCGZ_18835 [Jatropha curcas]      219   8e-55
emb|CDP16561.1| unnamed protein product [Coffea canephora]            218   1e-54
ref|XP_010086845.1| hypothetical protein L484_006075 [Morus nota...   211   2e-52
ref|XP_009616162.1| PREDICTED: pentatricopeptide repeat-containi...   211   2e-52
ref|XP_002521241.1| pentatricopeptide repeat-containing protein,...   209   7e-52
ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containi...   206   6e-51
ref|XP_011045620.1| PREDICTED: pentatricopeptide repeat-containi...   206   7e-51
ref|XP_002312939.2| hypothetical protein POPTR_0009s14110g [Popu...   206   7e-51
ref|XP_012436400.1| PREDICTED: pentatricopeptide repeat-containi...   205   1e-50
ref|XP_009771109.1| PREDICTED: pentatricopeptide repeat-containi...   205   1e-50

>gb|KDO59259.1| hypothetical protein CISIN_1g036340mg [Citrus sinensis]
          Length = 579

 Score =  273 bits (697), Expect = 5e-71
 Identities = 134/154 (87%), Positives = 142/154 (92%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           K G+MEEALRLFN MP RNVVSWN +ISGFLQNGDV NAIEFF+RMP RDSASLS LVSG
Sbjct: 72  KTGEMEEALRLFNSMPARNVVSWNAMISGFLQNGDVANAIEFFDRMPGRDSASLSALVSG 131

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LIQ+G+LDEAARVL KCGSR DG EDLV+AYNTLI GYGQRGRVEEARKLFD+IPVNCDR
Sbjct: 132 LIQNGELDEAARVLVKCGSRCDGGEDLVRAYNTLIVGYGQRGRVEEARKLFDKIPVNCDR 191

Query: 103 GEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           GEGNVRFKRNIVSWNSMIMCY KAGDVVSARE+F
Sbjct: 192 GEGNVRFKRNIVSWNSMIMCYAKAGDVVSAREIF 225



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 12/166 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV------------RNVVSWNTVISGFLQNGDVGNAIEFFERMPL 320
           + G++EEA +LF+ +PV            RN+VSWN++I  + + GDV +A E FE+M  
Sbjct: 171 QRGRVEEARKLFDKIPVNCDRGEGNVRFKRNIVSWNSMIMCYAKAGDVVSAREIFEQMLE 230

Query: 319 RDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEAR 140
           RD+ S + ++SG I   D++EA+ +  K         D +  +N +++GY Q G +E A 
Sbjct: 231 RDTFSWNTMISGYIHVLDMEEASNLFVKM-----PHPDTL-TWNAMVSGYAQIGNLELAL 284

Query: 139 KLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
             F ++P            ++N+VSWNSMI       D   A +LF
Sbjct: 285 DFFKRMP------------QKNLVSWNSMIAGCETNKDYEGAIKLF 318



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 3/132 (2%)
 Frame = -2

Query: 388 VISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQ---SGDLDEAARVLAKCGSRYD 218
           +ISG+++  ++  A + F+ MP RD  S +V++SG I    SG L+EA  +      R  
Sbjct: 1   MISGYVKRREMAKARKLFDEMPQRDVVSWNVMISGYISSRGSGFLEEARYLFDIMPER-- 58

Query: 217 GREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYV 38
              D V  +NT+I+GY + G +EEA +LF+ +P             RN+VSWN+MI  ++
Sbjct: 59  ---DCV-TWNTVISGYAKTGEMEEALRLFNSMPA------------RNVVSWNAMISGFL 102

Query: 37  KAGDVVSARELF 2
           + GDV +A E F
Sbjct: 103 QNGDVANAIEFF 114



 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 32/182 (17%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           MEEA  LF  MP  + ++WN ++SG+ Q G++  A++FF+RMP ++  S + +++G   +
Sbjct: 249 MEEASNLFVKMPHPDTLTWNAMVSGYAQIGNLELALDFFKRMPQKNLVSWNSMIAGCETN 308

Query: 271 GDLDEAARVLAKC---GSRYD------------GREDL-----------------VQAYN 188
            D + A ++  +    G + D            G  DL                 V   N
Sbjct: 309 KDYEGAIKLFIQMQVEGEKPDRHTFSSILSMSSGIVDLHLGMQIHQMVTKTVIPDVPINN 368

Query: 187 TLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARE 8
            LI  Y + G + EAR +F+++           +  +N+VSWN+MI      G    A E
Sbjct: 369 ALITMYARCGAIVEARIIFEEM-----------KLLKNVVSWNAMIGGCASHGFATEALE 417

Query: 7   LF 2
           LF
Sbjct: 418 LF 419


>ref|XP_006475400.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568842976|ref|XP_006475401.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 670

 Score =  273 bits (697), Expect = 5e-71
 Identities = 134/154 (87%), Positives = 142/154 (92%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           K G+MEEALRLFN MP RNVVSWN +ISGFLQNGDV NAIEFF+RMP RDSASLS LVSG
Sbjct: 163 KTGEMEEALRLFNSMPARNVVSWNAMISGFLQNGDVANAIEFFDRMPGRDSASLSALVSG 222

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LIQ+G+LDEAARVL KCGSR DG EDLV+AYNTLI GYGQRGRVEEARKLFD+IPVNCDR
Sbjct: 223 LIQNGELDEAARVLVKCGSRCDGGEDLVRAYNTLIVGYGQRGRVEEARKLFDKIPVNCDR 282

Query: 103 GEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           GEGNVRFKRNIVSWNSMIMCY KAGDVVSARE+F
Sbjct: 283 GEGNVRFKRNIVSWNSMIMCYAKAGDVVSAREIF 316



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           +  ++ EA  +F+    RN  +WN +ISG+++  ++  A + F+ MP RD  S +V++SG
Sbjct: 67  RTNRLTEARAVFDQTEQRNTKTWNVMISGYVKRREMAKARKLFDEMPQRDVVSWNVMISG 126

Query: 283 LIQ---SGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVN 113
            I    SG L+EA  +      R     D V  +NT+I+GY + G +EEA +LF+ +P  
Sbjct: 127 YISSSGSGFLEEARYLFDIMPER-----DCV-TWNTVISGYAKTGEMEEALRLFNSMPA- 179

Query: 112 CDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                      RN+VSWN+MI  +++ GDV +A E F
Sbjct: 180 -----------RNVVSWNAMISGFLQNGDVANAIEFF 205



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 12/166 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV------------RNVVSWNTVISGFLQNGDVGNAIEFFERMPL 320
           + G++EEA +LF+ +PV            RN+VSWN++I  + + GDV +A E FE+M  
Sbjct: 262 QRGRVEEARKLFDKIPVNCDRGEGNVRFKRNIVSWNSMIMCYAKAGDVVSAREIFEQMLE 321

Query: 319 RDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEAR 140
           RD+ S + ++SG I   D++EA+ +  K         D +  +N +++GY Q G +E A 
Sbjct: 322 RDTFSWNTMISGYIHVLDMEEASNLFVKM-----PHPDTL-TWNAMVSGYAQIGNLELAL 375

Query: 139 KLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
             F ++P            ++N+VSWNSMI       D   A +LF
Sbjct: 376 DFFKRMP------------QKNLVSWNSMIAGCETNKDYEGAIKLF 409



 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 32/182 (17%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           MEEA  LF  MP  + ++WN ++SG+ Q G++  A++FF+RMP ++  S + +++G   +
Sbjct: 340 MEEASNLFVKMPHPDTLTWNAMVSGYAQIGNLELALDFFKRMPQKNLVSWNSMIAGCETN 399

Query: 271 GDLDEAARVLAKC---GSRYD------------GREDL-----------------VQAYN 188
            D + A ++  +    G + D            G  DL                 V   N
Sbjct: 400 KDYEGAIKLFIQMQVEGEKPDRHTFSSILSMSSGIVDLHLGMQIHQMVTKTVIPDVPINN 459

Query: 187 TLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARE 8
            LI  Y + G + EAR +F+++           +  +N+VSWN+MI      G    A E
Sbjct: 460 ALITMYARCGAIVEARIIFEEM-----------KLLKNVVSWNAMIGGCASHGFATEALE 508

Query: 7   LF 2
           LF
Sbjct: 509 LF 510


>ref|XP_006451414.1| hypothetical protein CICLE_v10007675mg [Citrus clementina]
           gi|557554640|gb|ESR64654.1| hypothetical protein
           CICLE_v10007675mg [Citrus clementina]
          Length = 662

 Score =  273 bits (697), Expect = 5e-71
 Identities = 134/154 (87%), Positives = 142/154 (92%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           K G+MEEALRLFN MP RNVVSWN +ISGFLQNGDV NAIEFF+RMP RDSASLS LVSG
Sbjct: 155 KTGEMEEALRLFNSMPARNVVSWNAMISGFLQNGDVANAIEFFDRMPGRDSASLSALVSG 214

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LIQ+G+LDEAARVL KCGSR DG EDLV+AYNTLI GYGQRGRVEEARKLFD+IPVNCDR
Sbjct: 215 LIQNGELDEAARVLVKCGSRCDGGEDLVRAYNTLIVGYGQRGRVEEARKLFDKIPVNCDR 274

Query: 103 GEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           GEGNVRFKRNIVSWNSMIMCY KAGDVVSARE+F
Sbjct: 275 GEGNVRFKRNIVSWNSMIMCYAKAGDVVSAREIF 308



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           +  ++ EA  +F+    RN  +WN +ISG+++  ++  A + F+ MP RD  S +V++SG
Sbjct: 59  RTNRLTEARAVFDQTEQRNTKTWNVMISGYVKRREMAKARKLFDEMPQRDVVSWNVMISG 118

Query: 283 LIQ---SGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVN 113
            I    SG L+EA  +      R     D V  +NT+I+GY + G +EEA +LF+ +P  
Sbjct: 119 YISSSGSGFLEEARYLFDIMPER-----DCV-TWNTVISGYAKTGEMEEALRLFNSMPA- 171

Query: 112 CDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                      RN+VSWN+MI  +++ GDV +A E F
Sbjct: 172 -----------RNVVSWNAMISGFLQNGDVANAIEFF 197



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 12/166 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV------------RNVVSWNTVISGFLQNGDVGNAIEFFERMPL 320
           + G++EEA +LF+ +PV            RN+VSWN++I  + + GDV +A E FE+M  
Sbjct: 254 QRGRVEEARKLFDKIPVNCDRGEGNVRFKRNIVSWNSMIMCYAKAGDVVSAREIFEQMLE 313

Query: 319 RDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEAR 140
           RD+ S + ++SG I   D++EA+ +  K         D +  +N +++GY Q G +E A 
Sbjct: 314 RDTFSWNTMISGYIHVLDMEEASNLFVKM-----PHPDTL-TWNAMVSGYAQIGNLELAL 367

Query: 139 KLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
             F ++P            ++N+VSWNSMI       D   A +LF
Sbjct: 368 DFFKRMP------------QKNLVSWNSMIAGCETNKDYEGAIKLF 401



 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 32/182 (17%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           MEEA  LF  MP  + ++WN ++SG+ Q G++  A++FF+RMP ++  S + +++G   +
Sbjct: 332 MEEASNLFVKMPHPDTLTWNAMVSGYAQIGNLELALDFFKRMPQKNLVSWNSMIAGCETN 391

Query: 271 GDLDEAARVLAKC---GSRYD------------GREDL-----------------VQAYN 188
            D + A ++  +    G + D            G  DL                 V   N
Sbjct: 392 KDYEGAIKLFIQMQVEGEKPDRHTFSSILSMSSGIVDLHLGMQIHQMVTKTVIPDVPINN 451

Query: 187 TLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARE 8
            LI  Y + G + EAR +F+++           +  +N+VSWN+MI      G    A E
Sbjct: 452 ALITMYARCGAIVEARIIFEEM-----------KLLKNVVSWNAMIGGCASHGFATEALE 500

Query: 7   LF 2
           LF
Sbjct: 501 LF 502


>ref|XP_008358384.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Malus domestica]
          Length = 534

 Score =  238 bits (606), Expect = 2e-60
 Identities = 119/155 (76%), Positives = 136/155 (87%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KNG+M EAL LFN MP R+VVSWN +I+GFLQNG+V  AIEFFERMP RD ASLS LVSG
Sbjct: 171 KNGRMAEALDLFNRMPERSVVSWNAMITGFLQNGEVVRAIEFFERMPERDGASLSALVSG 230

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LIQ+G+LDEAAR++ +CG++ DGREDLV AYNTLIAGYGQRGRVEEARKLFDQIP +  +
Sbjct: 231 LIQNGELDEAARIIIECGNKDDGREDLVHAYNTLIAGYGQRGRVEEARKLFDQIPFSHKK 290

Query: 103 G-EGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           G EGN RF+RN+VSWNSMIMCYVK G+VVSARELF
Sbjct: 291 GKEGNGRFERNVVSWNSMIMCYVKTGNVVSARELF 325



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           + G + +A  +F+ MP RNVV+WN++I+G+++  ++  A + F+ MP RD  + ++++SG
Sbjct: 75  RTGHIAQAREVFDQMPXRNVVTWNSMITGYVKRREMAKARKLFDEMPERDVVTWNLMISG 134

Query: 283 LIQSGDLDEAARVLAKCGSRY--DGR-------EDLVQAYNTLIAGYGQRGRVEEARKLF 131
            I               GSRY  +GR       E    ++NT+I+GY + GR+ EA  LF
Sbjct: 135 YISCR------------GSRYIEEGRILFDEMPERDCVSWNTIISGYAKNGRMAEALDLF 182

Query: 130 DQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           +++P            +R++VSWN+MI  +++ G+VV A E F
Sbjct: 183 NRMP------------ERSVVSWNAMITGFLQNGEVVRAIEFF 213



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 57/167 (34%), Positives = 94/167 (56%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           + G++EEA +LF+ +P              RNVVSWN++I  +++ G+V +A E F++M 
Sbjct: 270 QRGRVEEARKLFDQIPFSHKKGKEGNGRFERNVVSWNSMIMCYVKTGNVVSARELFDQMV 329

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
            RD+ S + ++SG +   D+ EA+ + +K  +      D + ++N+LI GY Q G +E A
Sbjct: 330 ERDTFSWNTMISGYVHVSDMKEASSLFSKMPN-----PDAL-SWNSLILGYAQVGSLELA 383

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           R  F+++P            ++N+V+WNSMI  Y K  D V A  LF
Sbjct: 384 RGYFEKMP------------QKNLVTWNSMIAGYEKNEDFVGAVNLF 418


>ref|XP_008358362.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Malus domestica]
          Length = 678

 Score =  238 bits (606), Expect = 2e-60
 Identities = 119/155 (76%), Positives = 136/155 (87%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KNG+M EAL LFN MP R+VVSWN +I+GFLQNG+V  AIEFFERMP RD ASLS LVSG
Sbjct: 171 KNGRMAEALDLFNRMPERSVVSWNAMITGFLQNGEVVRAIEFFERMPERDGASLSALVSG 230

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LIQ+G+LDEAAR++ +CG++ DGREDLV AYNTLIAGYGQRGRVEEARKLFDQIP +  +
Sbjct: 231 LIQNGELDEAARIIIECGNKDDGREDLVHAYNTLIAGYGQRGRVEEARKLFDQIPFSHKK 290

Query: 103 G-EGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           G EGN RF+RN+VSWNSMIMCYVK G+VVSARELF
Sbjct: 291 GKEGNGRFERNVVSWNSMIMCYVKTGNVVSARELF 325



 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 52/157 (33%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           + G + +A  +F+ MP RNVV+WN++I+G+++  ++  A + F+ MP RD  + ++++SG
Sbjct: 75  RTGHIAQAREVFDQMPXRNVVTWNSMITGYVKRREMAKARKLFDEMPERDVVTWNLMISG 134

Query: 283 LIQ---SGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVN 113
            I    S  ++E   +  +   R     D V ++NT+I+GY + GR+ EA  LF+++P  
Sbjct: 135 YISCRXSRYIEEGRILFDEMPER-----DCV-SWNTIISGYAKNGRMAEALDLFNRMP-- 186

Query: 112 CDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                     +R++VSWN+MI  +++ G+VV A E F
Sbjct: 187 ----------ERSVVSWNAMITGFLQNGEVVRAIEFF 213



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 57/167 (34%), Positives = 94/167 (56%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           + G++EEA +LF+ +P              RNVVSWN++I  +++ G+V +A E F++M 
Sbjct: 270 QRGRVEEARKLFDQIPFSHKKGKEGNGRFERNVVSWNSMIMCYVKTGNVVSARELFDQMV 329

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
            RD+ S + ++SG +   D+ EA+ + +K  +      D + ++N+LI GY Q G +E A
Sbjct: 330 ERDTFSWNTMISGYVHVSDMKEASSLFSKMPN-----PDAL-SWNSLILGYAQVGSLELA 383

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           R  F+++P            ++N+V+WNSMI  Y K  D V A  LF
Sbjct: 384 RGYFEKMP------------QKNLVTWNSMIAGYEKNEDFVGAVNLF 418



 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
 Frame = -2

Query: 457 GKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLR----DSASLSVLV 290
           G +E A   F  MP +N+V+WN++I+G+ +N D   A+  F  M L+    D  +LS ++
Sbjct: 378 GSLELARGYFEKMPQKNLVTWNSMIAGYEKNEDFVGAVNLFSWMQLKGEKPDRHTLSSVL 437

Query: 289 SGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNC 110
           S      DL+   ++             +    N+LI  Y + G + EA+ +FD++    
Sbjct: 438 SVSTGLVDLNLGMQIHQLVAKTVIADMPI---NNSLITMYSRCGAIREAQTIFDEM---- 490

Query: 109 DRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                  + +++++SWN+MI  Y   G    A ELF
Sbjct: 491 -------KLQKDVISWNAMIGGYASHGFAAEALELF 519


>ref|XP_008236131.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Prunus mume]
          Length = 704

 Score =  237 bits (604), Expect = 3e-60
 Identities = 119/155 (76%), Positives = 138/155 (89%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KN +M EAL+LFN MP ++VVSWN +I+GFLQNGDV +AIEFFERMP RD ASLS LVSG
Sbjct: 197 KNQRMTEALQLFNRMPNQSVVSWNAMITGFLQNGDVVHAIEFFERMPERDRASLSALVSG 256

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LIQ+G+LDEAAR+L +CG+R DGREDLV AYNTLIAGYGQRGRVEEARKLFDQIP+  ++
Sbjct: 257 LIQNGELDEAARILLECGNRDDGREDLVHAYNTLIAGYGQRGRVEEARKLFDQIPLAHEK 316

Query: 103 G-EGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           G EGN RF+RN+VSWN MIMCYVKAG++VSARELF
Sbjct: 317 GKEGNRRFERNVVSWNIMIMCYVKAGNIVSARELF 351



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 56/167 (33%), Positives = 96/167 (57%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           + G++EEA +LF+ +P+             RNVVSWN +I  +++ G++ +A E F++M 
Sbjct: 296 QRGRVEEARKLFDQIPLAHEKGKEGNRRFERNVVSWNIMIMCYVKAGNIVSARELFDQMR 355

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
            RD+ S + ++SG + + D++EA+ + +K  +      D + ++N+LI GY Q G +E A
Sbjct: 356 ERDTFSWNTMISGYVHALDMEEASSLFSKMPN-----PDAL-SWNSLILGYSQVGCLELA 409

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
              F+++P            ++N+VSWNSMI  Y K  D V A +LF
Sbjct: 410 HDFFEKMP------------QKNLVSWNSMIAGYEKNEDFVGAVKLF 444



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 53/157 (33%), Positives = 93/157 (59%), Gaps = 3/157 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           + G++ +A   F+ M  RNVV+WN++I+G+++  ++  A + F+ MP RD  S ++++SG
Sbjct: 101 RTGQIAQAREDFDRMEQRNVVTWNSMITGYVKRREMPKARKLFDEMPERDVVSWNLMISG 160

Query: 283 LIQ-SGDLDEAARVLAKCGSRYDGR--EDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVN 113
            I   GD     R + +  S +D     D V ++NT+I+GY +  R+ EA +LF+++P  
Sbjct: 161 YISCRGD-----RYIEEGRSLFDQMPVRDCV-SWNTMISGYAKNQRMTEALQLFNRMP-- 212

Query: 112 CDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                      +++VSWN+MI  +++ GDVV A E F
Sbjct: 213 ----------NQSVVSWNAMITGFLQNGDVVHAIEFF 239



 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 32/182 (17%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           MEEA  LF+ MP  + +SWN++I G+ Q G +  A +FFE+MP ++  S + +++G  ++
Sbjct: 375 MEEASSLFSKMPNPDALSWNSLILGYSQVGCLELAHDFFEKMPQKNLVSWNSMIAGYEKN 434

Query: 271 GDLDEAARVLAKC---GSRYD------------GREDL-----------------VQAYN 188
            D   A ++ A+    G + D            G  DL                 V   N
Sbjct: 435 EDFVGAVKLFARMQLEGEKPDRHTLSSVLSVSTGLVDLHLGMQVHQMVTKTVIADVPLNN 494

Query: 187 TLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARE 8
           +LI  Y + G ++EA  +FD++           + +++++SWN+MI  Y   G    A E
Sbjct: 495 SLITMYSRCGEIKEAHTIFDKM-----------KLQKDVISWNAMIGGYASHGFAAEALE 543

Query: 7   LF 2
           LF
Sbjct: 544 LF 545


>ref|XP_011458358.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Fragaria vesca subsp. vesca]
           gi|764531234|ref|XP_011458359.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Fragaria vesca subsp. vesca]
           gi|764531238|ref|XP_011458360.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Fragaria vesca subsp. vesca]
          Length = 671

 Score =  231 bits (589), Expect = 2e-58
 Identities = 113/156 (72%), Positives = 134/156 (85%), Gaps = 2/156 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KNG+M EALRLF CMP R VVSWN +++GFLQNGDVG+A+EFFERMP RD ASL  LVSG
Sbjct: 164 KNGRMGEALRLFECMPERTVVSWNAMVTGFLQNGDVGSAVEFFERMPQRDGASLCALVSG 223

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           ++ +G+LDEAAR++ +CG+R +G EDLV AYNTLIAGYGQRGRVEEA + FDQIP+  ++
Sbjct: 224 MVHNGELDEAARIVVQCGNRGEGGEDLVSAYNTLIAGYGQRGRVEEAWQFFDQIPICQEK 283

Query: 103 --GEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
             GEG  RF+RN+VSWNSMIMCYVKAGDVVSARELF
Sbjct: 284 VGGEGR-RFERNVVSWNSMIMCYVKAGDVVSARELF 318



 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 53/156 (33%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           + G++ +A  +F+ M  RN+V+WN++ISG+++  ++  A + F+ MP RD  S +V++SG
Sbjct: 68  RTGRISQAREVFDNMKHRNIVTWNSMISGYVKRREIAKARKLFDEMPERDVVSWNVMISG 127

Query: 283 LIQSGDLDEAARVLAKCGSRYD--GREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNC 110
            +        AR + +  S +D     D V ++NT+I+GY + GR+ EA +LF+ +P   
Sbjct: 128 YVSC----RGARYIEEGRSLFDQMPTRDSV-SWNTMISGYAKNGRMGEALRLFECMP--- 179

Query: 109 DRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                    +R +VSWN+M+  +++ GDV SA E F
Sbjct: 180 ---------ERTVVSWNAMVTGFLQNGDVGSAVEFF 206



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 52/167 (31%), Positives = 95/167 (56%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           + G++EEA + F+ +P+             RNVVSWN++I  +++ GDV +A E F++M 
Sbjct: 263 QRGRVEEAWQFFDQIPICQEKVGGEGRRFERNVVSWNSMIMCYVKAGDVVSARELFDQMI 322

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
             D+ S + ++SG +   D++EA+++  +  +      D + ++N++I GY Q  R++ A
Sbjct: 323 EHDTFSWNTMISGYVNISDMEEASKLFREMPT-----PDTL-SWNSMILGYAQVSRLKLA 376

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
            + FD++P            ++++VSWNSMI  Y K  D + A +LF
Sbjct: 377 HEFFDRMP------------QKSLVSWNSMIAGYEKNEDFIGAVKLF 411



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 32/182 (17%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           MEEA +LF  MP  + +SWN++I G+ Q   +  A EFF+RMP +   S + +++G  ++
Sbjct: 342 MEEASKLFREMPTPDTLSWNSMILGYAQVSRLKLAHEFFDRMPQKSLVSWNSMIAGYEKN 401

Query: 271 GDLDEAARVLAKC---GSRYD------------GREDL-----------------VQAYN 188
            D   A ++ ++    G + D            G  DL                 +   N
Sbjct: 402 EDFIGAVKLFSQMQLEGEKPDRHTLSSVLSVCTGLVDLHLGMQIHQLVTKIVIADLPINN 461

Query: 187 TLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARE 8
           +LI  Y + G +EEA  +FD++           + +++++SWN+MI  Y   G    A E
Sbjct: 462 SLITMYSRCGAIEEAHTIFDEM-----------KREKDVISWNAMIGGYASHGFAAEALE 510

Query: 7   LF 2
           LF
Sbjct: 511 LF 512


>ref|XP_007199439.1| hypothetical protein PRUPE_ppa026671mg [Prunus persica]
           gi|462394839|gb|EMJ00638.1| hypothetical protein
           PRUPE_ppa026671mg [Prunus persica]
          Length = 611

 Score =  230 bits (587), Expect = 3e-58
 Identities = 116/155 (74%), Positives = 135/155 (87%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KN +M EAL+LFN MP ++VVSWN +I+GFLQNGDV +AIEFFER+P RD ASLS LVSG
Sbjct: 104 KNQRMTEALQLFNRMPNQSVVSWNAMITGFLQNGDVVHAIEFFERIPERDRASLSALVSG 163

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LIQ+G+LDEAAR+L +CG+R DGRE LV AYNTLIAGYGQRGRVEEARKLFDQIP    +
Sbjct: 164 LIQNGELDEAARILLECGNRDDGREGLVHAYNTLIAGYGQRGRVEEARKLFDQIPFLHQK 223

Query: 103 G-EGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           G EGN RF+RN+VSWN+MIMCYVK G++VSARELF
Sbjct: 224 GKEGNRRFERNVVSWNTMIMCYVKTGNIVSARELF 258



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 56/167 (33%), Positives = 96/167 (57%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           + G++EEA +LF+ +P              RNVVSWNT+I  +++ G++ +A E F++M 
Sbjct: 203 QRGRVEEARKLFDQIPFLHQKGKEGNRRFERNVVSWNTMIMCYVKTGNIVSARELFDQMR 262

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
            RD+ S + ++SG + + D+++A+ + +K  +      D + ++N+LI GY Q G +E A
Sbjct: 263 ERDTFSWNTMISGYVHASDMEQASSLFSKMPN-----PDAL-SWNSLILGYSQVGCLELA 316

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
              F+++P            ++N+VSWNSMI  Y K  D V A +LF
Sbjct: 317 HDFFEKMP------------QKNLVSWNSMIAGYEKNEDFVGAVKLF 351



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 53/157 (33%), Positives = 93/157 (59%), Gaps = 3/157 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           + G++ +A   F+ M  RNVV+WN++I+G+++  ++  A + F+ MP RD  S ++++SG
Sbjct: 8   RTGQIAQAREDFDRMEQRNVVTWNSMITGYVKRREMAKARKLFDEMPERDVVSWNLMISG 67

Query: 283 LIQ-SGDLDEAARVLAKCGSRYDGR--EDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVN 113
            I   GD     R + +  S +D     D V ++NT+I+GY +  R+ EA +LF+++P  
Sbjct: 68  YISCRGD-----RYIEEGRSLFDQMPVRDCV-SWNTMISGYAKNQRMTEALQLFNRMP-- 119

Query: 112 CDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                      +++VSWN+MI  +++ GDVV A E F
Sbjct: 120 ----------NQSVVSWNAMITGFLQNGDVVHAIEFF 146



 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 32/182 (17%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           ME+A  LF+ MP  + +SWN++I G+ Q G +  A +FFE+MP ++  S + +++G  ++
Sbjct: 282 MEQASSLFSKMPNPDALSWNSLILGYSQVGCLELAHDFFEKMPQKNLVSWNSMIAGYEKN 341

Query: 271 GDLDEAARVLAKC---GSRYD------------GREDL-----------------VQAYN 188
            D   A ++ A+    G + D            G  DL                 V   N
Sbjct: 342 EDFVGAVKLFARMQLEGEKPDRHTLSSLLSVSTGLVDLHLGMQVHQMVTKTVIADVPLNN 401

Query: 187 TLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARE 8
           +LI  Y + G ++EA+ +FD++           + ++++VSWN+MI  Y   G    A E
Sbjct: 402 SLITMYSRCGAIKEAQTIFDEM-----------KLQKDVVSWNAMIGGYASHGFAAEALE 450

Query: 7   LF 2
           LF
Sbjct: 451 LF 452


>ref|XP_007041730.1| Mitochondrial editing factor 9 isoform 1 [Theobroma cacao]
           gi|590683987|ref|XP_007041731.1| Mitochondrial editing
           factor 9 isoform 1 [Theobroma cacao]
           gi|508705665|gb|EOX97561.1| Mitochondrial editing factor
           9 isoform 1 [Theobroma cacao]
           gi|508705666|gb|EOX97562.1| Mitochondrial editing factor
           9 isoform 1 [Theobroma cacao]
          Length = 657

 Score =  223 bits (569), Expect = 3e-56
 Identities = 109/155 (70%), Positives = 131/155 (84%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KNG+M+EA+RLF  MP RNVVSWN +I+GFL+NGD  +A E+FERMP +DS S+S  VSG
Sbjct: 150 KNGRMDEAIRLFESMPERNVVSWNAMITGFLRNGDTVSATEYFERMPEQDSTSVSAFVSG 209

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           L+Q+GDLDEAARVL +CG+R   RE LVQA NTLIAGYGQ+GRV++AR+LFDQIP NC +
Sbjct: 210 LVQNGDLDEAARVLIECGNRGGWREGLVQACNTLIAGYGQKGRVDDARRLFDQIPYNCVQ 269

Query: 103 GEG-NVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
            EG    F+RN+VSWNSMIMCYVKAGD+VSARELF
Sbjct: 270 MEGRKAEFERNVVSWNSMIMCYVKAGDIVSARELF 304



 Score =  100 bits (249), Expect = 4e-19
 Identities = 56/156 (35%), Positives = 94/156 (60%), Gaps = 2/156 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           + GK+ EA  +F+ MP R+ V+WN++ISG+++  ++  A + F+ MP RD  S ++++SG
Sbjct: 54  RTGKLNEAKSVFDQMPQRDTVTWNSMISGYVKRREIAKARKLFDEMPKRDIVSWNLIISG 113

Query: 283 LIQSGDLDEAARVLAKCGSRYD--GREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNC 110
                      R L +    +D   R+D V ++NT+I+GY + GR++EA +LF+ +P   
Sbjct: 114 YASC----LGYRFLEEGKKLFDQMPRKDFV-SWNTMISGYAKNGRMDEAIRLFESMP--- 165

Query: 109 DRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                    +RN+VSWN+MI  +++ GD VSA E F
Sbjct: 166 ---------ERNVVSWNAMITGFLRNGDTVSATEYF 192



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 53/167 (31%), Positives = 97/167 (58%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           + G++++A RLF+ +P              RNVVSWN++I  +++ GD+ +A E F++M 
Sbjct: 249 QKGRVDDARRLFDQIPYNCVQMEGRKAEFERNVVSWNSMIMCYVKAGDIVSARELFDQMV 308

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
            RD+ S + +++G +Q  D++EA+ +     +     + L  ++N++I+G+ Q GR+E A
Sbjct: 309 ERDTISWNTMINGYVQMSDMEEASNLF----NTMPKPDSL--SWNSMISGFSQLGRLELA 362

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           R LF+++P            ++++VSWNS+I  Y K  D   A +LF
Sbjct: 363 RDLFEKMP------------QKHLVSWNSIIAAYEKNEDYKGAIKLF 397



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 32/182 (17%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           MEEA  LFN MP  + +SWN++ISGF Q G +  A + FE+MP +   S + +++   ++
Sbjct: 328 MEEASNLFNTMPKPDSLSWNSMISGFSQLGRLELARDLFEKMPQKHLVSWNSIIAAYEKN 387

Query: 271 GDLDEAARVLAKC---GSRYD------------GREDL-----------------VQAYN 188
            D   A ++  +    G + D            G  DL                 V   N
Sbjct: 388 EDYKGAIKLFIQMQAEGEKPDRHTFSSVLSVATGLVDLHLGMQIHQLVSKTVIPDVPIKN 447

Query: 187 TLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARE 8
           +LI  Y + G + E+R +FD++           +  ++++SWN+MI  Y   G  + A E
Sbjct: 448 SLITMYSRCGAIIESRTIFDEM-----------KSLKDVISWNAMIGGYASHGFAIEALE 496

Query: 7   LF 2
           LF
Sbjct: 497 LF 498



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 38/114 (33%), Positives = 62/114 (54%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           K G +  A  LF+ M  R+ +SWNT+I+G++Q  D+  A   F  MP  DS S + ++SG
Sbjct: 293 KAGDIVSARELFDQMVERDTISWNTMINGYVQMSDMEEASNLFNTMPKPDSLSWNSMISG 352

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQI 122
             Q G L+ A  +  K   ++      + ++N++IA Y +    + A KLF Q+
Sbjct: 353 FSQLGRLELARDLFEKMPQKH------LVSWNSIIAAYEKNEDYKGAIKLFIQM 400


>ref|XP_012081794.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Jatropha curcas]
           gi|802674883|ref|XP_012081795.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Jatropha curcas]
           gi|802674893|ref|XP_012081796.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Jatropha curcas]
          Length = 675

 Score =  219 bits (557), Expect = 8e-55
 Identities = 107/155 (69%), Positives = 130/155 (83%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           +NG++EEAL+LFN MP  N VSWN ++SGFLQNGDV  AIEFFERMP RDS SLS LVSG
Sbjct: 170 RNGRIEEALQLFNTMPKPNAVSWNAIVSGFLQNGDVARAIEFFERMPERDSTSLSALVSG 229

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LI +  L+EAA++L   G+   G+E+LV AYNTLIAGYGQRGRV+EARKLFD++P N D+
Sbjct: 230 LIHNEKLEEAAKILLDYGNNNSGKEELVHAYNTLIAGYGQRGRVDEARKLFDKMPSNNDK 289

Query: 103 GEGNV-RFKRNIVSWNSMIMCYVKAGDVVSARELF 2
            +G+  RF+RN+VSWN+MIMCYVKAGD+VSARELF
Sbjct: 290 QKGSKGRFERNVVSWNTMIMCYVKAGDIVSARELF 324



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 52/156 (33%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           + G++ +A  LF+ M  RN +SWN++ISG+ + G++  A + F+ MP RD  S ++++SG
Sbjct: 74  QTGQINDARALFDKMEQRNTISWNSMISGYARQGEMTKARKLFDEMPKRDVVSWNLMISG 133

Query: 283 LIQSGDLDEAARVLAKCGSRYD--GREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNC 110
            +         R + +    +D   + D V ++NT+I+GY + GR+EEA +LF+ +P   
Sbjct: 134 YVSC----RGKRFIEEGRCLFDKMPKRDCV-SWNTMISGYARNGRIEEALQLFNTMP--- 185

Query: 109 DRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                    K N VSWN+++  +++ GDV  A E F
Sbjct: 186 ---------KPNAVSWNAIVSGFLQNGDVARAIEFF 212



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           + G+++EA +LF+ MP              RNVVSWNT+I  +++ GD+ +A E F++M 
Sbjct: 269 QRGRVDEARKLFDKMPSNNDKQKGSKGRFERNVVSWNTMIMCYVKAGDIVSARELFDQMI 328

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
           + D+ S + ++SG +   D++EA+ +  K  +          ++N++I+G+   G +E A
Sbjct: 329 VLDTFSWNTIISGYVHVSDMEEASNLFCKMPNPDS------FSWNSMISGHALVGNLELA 382

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
            + F+++P            ++N+VSWNSMI  + K  D   A ++F
Sbjct: 383 HEFFERMP------------QKNLVSWNSMIAGHEKKEDYKGAIKVF 417



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 32/182 (17%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           MEEA  LF  MP  +  SWN++ISG    G++  A EFFERMP ++  S + +++G  + 
Sbjct: 348 MEEASNLFCKMPNPDSFSWNSMISGHALVGNLELAHEFFERMPQKNLVSWNSMIAGHEKK 407

Query: 271 GDLDEAARV---------------LAKCGSRYDGREDL-----------------VQAYN 188
            D   A +V               L+   S   G  DL                 V   N
Sbjct: 408 EDYKGAIKVFFRMQVEGEKPDRHTLSSLLSASSGIVDLHLGMQIHQLVRKTVIPDVPLNN 467

Query: 187 TLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARE 8
            LI  Y + G + EA  +FD++  +           + ++SWN+MI  Y   G    A E
Sbjct: 468 ALITMYSRCGAIIEAWTIFDEMKPH-----------KEVISWNAMIGGYASHGYAAEALE 516

Query: 7   LF 2
           LF
Sbjct: 517 LF 518


>gb|KDP29673.1| hypothetical protein JCGZ_18835 [Jatropha curcas]
          Length = 659

 Score =  219 bits (557), Expect = 8e-55
 Identities = 107/155 (69%), Positives = 130/155 (83%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           +NG++EEAL+LFN MP  N VSWN ++SGFLQNGDV  AIEFFERMP RDS SLS LVSG
Sbjct: 154 RNGRIEEALQLFNTMPKPNAVSWNAIVSGFLQNGDVARAIEFFERMPERDSTSLSALVSG 213

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LI +  L+EAA++L   G+   G+E+LV AYNTLIAGYGQRGRV+EARKLFD++P N D+
Sbjct: 214 LIHNEKLEEAAKILLDYGNNNSGKEELVHAYNTLIAGYGQRGRVDEARKLFDKMPSNNDK 273

Query: 103 GEGNV-RFKRNIVSWNSMIMCYVKAGDVVSARELF 2
            +G+  RF+RN+VSWN+MIMCYVKAGD+VSARELF
Sbjct: 274 QKGSKGRFERNVVSWNTMIMCYVKAGDIVSARELF 308



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 52/156 (33%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           + G++ +A  LF+ M  RN +SWN++ISG+ + G++  A + F+ MP RD  S ++++SG
Sbjct: 58  QTGQINDARALFDKMEQRNTISWNSMISGYARQGEMTKARKLFDEMPKRDVVSWNLMISG 117

Query: 283 LIQSGDLDEAARVLAKCGSRYD--GREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNC 110
            +         R + +    +D   + D V ++NT+I+GY + GR+EEA +LF+ +P   
Sbjct: 118 YVSC----RGKRFIEEGRCLFDKMPKRDCV-SWNTMISGYARNGRIEEALQLFNTMP--- 169

Query: 109 DRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                    K N VSWN+++  +++ GDV  A E F
Sbjct: 170 ---------KPNAVSWNAIVSGFLQNGDVARAIEFF 196



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           + G+++EA +LF+ MP              RNVVSWNT+I  +++ GD+ +A E F++M 
Sbjct: 253 QRGRVDEARKLFDKMPSNNDKQKGSKGRFERNVVSWNTMIMCYVKAGDIVSARELFDQMI 312

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
           + D+ S + ++SG +   D++EA+ +  K  +          ++N++I+G+   G +E A
Sbjct: 313 VLDTFSWNTIISGYVHVSDMEEASNLFCKMPNPDS------FSWNSMISGHALVGNLELA 366

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
            + F+++P            ++N+VSWNSMI  + K  D   A ++F
Sbjct: 367 HEFFERMP------------QKNLVSWNSMIAGHEKKEDYKGAIKVF 401



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 32/182 (17%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           MEEA  LF  MP  +  SWN++ISG    G++  A EFFERMP ++  S + +++G  + 
Sbjct: 332 MEEASNLFCKMPNPDSFSWNSMISGHALVGNLELAHEFFERMPQKNLVSWNSMIAGHEKK 391

Query: 271 GDLDEAARV---------------LAKCGSRYDGREDL-----------------VQAYN 188
            D   A +V               L+   S   G  DL                 V   N
Sbjct: 392 EDYKGAIKVFFRMQVEGEKPDRHTLSSLLSASSGIVDLHLGMQIHQLVRKTVIPDVPLNN 451

Query: 187 TLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARE 8
            LI  Y + G + EA  +FD++  +           + ++SWN+MI  Y   G    A E
Sbjct: 452 ALITMYSRCGAIIEAWTIFDEMKPH-----------KEVISWNAMIGGYASHGYAAEALE 500

Query: 7   LF 2
           LF
Sbjct: 501 LF 502


>emb|CDP16561.1| unnamed protein product [Coffea canephora]
          Length = 669

 Score =  218 bits (556), Expect = 1e-54
 Identities = 107/156 (68%), Positives = 128/156 (82%), Gaps = 2/156 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KNG+++EA+RLF CMP RNVVSWN ++SG LQNGD+  A+EFFERMP RD+ASLSVLVSG
Sbjct: 162 KNGRIDEAMRLFMCMPKRNVVSWNAIVSGLLQNGDMKRAVEFFERMPDRDAASLSVLVSG 221

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNC-- 110
           LIQ+ +LD AA VL K G+R  G ED +QAYN LIAGYGQ+GRV +ARKLFDQIP+    
Sbjct: 222 LIQNEELDAAAHVLFKYGTRDSGSEDYLQAYNVLIAGYGQKGRVNDARKLFDQIPIYAAD 281

Query: 109 DRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           D   G  RF++N+VSWNSMIMCYVK GD++SARELF
Sbjct: 282 DNRNGVKRFEKNLVSWNSMIMCYVKTGDIISARELF 317



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 48/155 (30%), Positives = 92/155 (59%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           ++G+++EA  LF+ + +RN ++WN+++SG++   ++  A + F+ MP RD  S ++++SG
Sbjct: 66  RSGRIQEARVLFDGLRLRNTITWNSMMSGYVHRREIAKARKLFDEMPERDVVSWNLIISG 125

Query: 283 LIQSGDLDEAARVLAKCGSRYDGR-EDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCD 107
            +        +R + +    +D   E  V ++NT+I+GY + GR++EA +LF  +P    
Sbjct: 126 YMGC----RGSRYMQEAKYLFDQMPERDVVSWNTMISGYAKNGRIDEAMRLFMCMP---- 177

Query: 106 RGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                   KRN+VSWN+++   ++ GD+  A E F
Sbjct: 178 --------KRNVVSWNAIVSGLLQNGDMKRAVEFF 204



 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 47/168 (27%), Positives = 95/168 (56%), Gaps = 14/168 (8%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV--------------RNVVSWNTVISGFLQNGDVGNAIEFFERM 326
           + G++ +A +LF+ +P+              +N+VSWN++I  +++ GD+ +A E F++M
Sbjct: 261 QKGRVNDARKLFDQIPIYAADDNRNGVKRFEKNLVSWNSMIMCYVKTGDIISARELFDKM 320

Query: 325 PLRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEE 146
             RDS S + ++SG +   +++EA+R+ ++       R D + ++N++I+G+ + G +E 
Sbjct: 321 IERDSVSWNTMISGYVHVRNMEEASRLFSEM-----PRPDAL-SWNSMISGFSESGNLEL 374

Query: 145 ARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           AR  F+++P            ++N +SWN++I    K  D   A +LF
Sbjct: 375 ARNFFERMP------------EKNRISWNAIIAGSEKNADYDGAIKLF 410



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERM----PLRDSASLSV 296
           ++G +E A   F  MP +N +SWN +I+G  +N D   AI+ F  M       D  +LS 
Sbjct: 368 ESGNLELARNFFERMPEKNRISWNAIIAGSEKNADYDGAIKLFIEMQGAGEKPDRHTLSS 427

Query: 295 LVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPV 116
           L+S   +S  +D   ++              +   N+LI  Y + G + EAR +FD+   
Sbjct: 428 LLSICAESVAVDLGMQIHQLVTKIV---VPDIPLNNSLITMYARCGAIFEARTIFDE--- 481

Query: 115 NCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                   ++F+++++SWN+MI  Y   G  + A ELF
Sbjct: 482 --------MQFEKDVISWNAMIGGYASHGYALEALELF 511


>ref|XP_010086845.1| hypothetical protein L484_006075 [Morus notabilis]
           gi|587833216|gb|EXB24043.1| hypothetical protein
           L484_006075 [Morus notabilis]
          Length = 708

 Score =  211 bits (537), Expect = 2e-52
 Identities = 104/155 (67%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KNG+M +AL+LFN MP RNVVSWN +ISGFL NGD   AI+FF++MP RD AS S LVSG
Sbjct: 174 KNGRMSQALQLFNAMPERNVVSWNAMISGFLLNGDAVRAIDFFDKMPERDDASRSALVSG 233

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNC-D 107
           L+++G+LDEAAR+L + G++  GREDLV AYNTLIAGYGQRGR+EEAR+LFD+IP    +
Sbjct: 234 LVRNGELDEAARLLLEWGNKDVGREDLVHAYNTLIAGYGQRGRIEEARRLFDEIPFYWGE 293

Query: 106 RGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           R E + RF+RN+VSWNSMIMCY+K  D+VSAR+LF
Sbjct: 294 RKECSKRFERNVVSWNSMIMCYLKVKDIVSARQLF 328



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 52/157 (33%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           ++G++ EA   F+ M  RNVV+WN+++SG+++  ++  A + F+ MP RD  S ++++SG
Sbjct: 78  RSGRIGEAREAFDGMKHRNVVTWNSMMSGYVKRREMAKARKLFDEMPERDIVSWNLMISG 137

Query: 283 LIQ---SGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVN 113
            +    S D++E  ++  +   R     D V ++NT+I+GY + GR+ +A +LF+ +P  
Sbjct: 138 CMSCRGSRDIEEGRKLFDQMHER-----DCV-SWNTMISGYTKNGRMSQALQLFNAMP-- 189

Query: 112 CDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                     +RN+VSWN+MI  ++  GD V A + F
Sbjct: 190 ----------ERNVVSWNAMISGFLLNGDAVRAIDFF 216



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 50/167 (29%), Positives = 91/167 (54%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           + G++EEA RLF+ +P              RNVVSWN++I  +L+  D+ +A + F+++ 
Sbjct: 273 QRGRIEEARRLFDEIPFYWGERKECSKRFERNVVSWNSMIMCYLKVKDIVSARQLFDQLT 332

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
            RD+ S + +++G +Q  D+DEA+ +  K  +        V  +N +++G+ Q G ++ A
Sbjct: 333 ERDTFSWNTMITGYVQMSDMDEASNLFRKMPN------PDVLTWNLMVSGFVQIGSLKVA 386

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
              F+++P            ++N+VSWNS+I  Y K  D   + +LF
Sbjct: 387 CYYFERMP------------QKNLVSWNSIIAGYDKNEDYKGSIKLF 421



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 32/182 (17%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           M+EA  LF  MP  +V++WN ++SGF+Q G +  A  +FERMP ++  S + +++G  ++
Sbjct: 352 MDEASNLFRKMPNPDVLTWNLMVSGFVQIGSLKVACYYFERMPQKNLVSWNSIIAGYDKN 411

Query: 271 GDLDEAARVLAKC---GSRYD------------GREDL-----------------VQAYN 188
            D   + ++  +    G ++D            G  DL                 V   N
Sbjct: 412 EDYKGSIKLFTQMQHEGEKHDSHTLSSLLSASTGLMDLHLGRQVHQLVTKTVLADVPINN 471

Query: 187 TLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARE 8
           +LI  Y + G +EEAR +FD++ +            R+++SWN+MI  Y   G    A E
Sbjct: 472 SLITMYSRCGAIEEARTIFDEMKL------------RDVISWNAMIGGYASHGFAAEALE 519

Query: 7   LF 2
           LF
Sbjct: 520 LF 521


>ref|XP_009616162.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Nicotiana tomentosiformis]
           gi|697124339|ref|XP_009616164.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Nicotiana tomentosiformis]
           gi|697124341|ref|XP_009616165.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Nicotiana tomentosiformis]
           gi|697124343|ref|XP_009616166.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Nicotiana tomentosiformis]
          Length = 660

 Score =  211 bits (537), Expect = 2e-52
 Identities = 106/156 (67%), Positives = 126/156 (80%), Gaps = 2/156 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           K GKM EAL+LFNCMP +NVVSWN VISGFL+NGDV  A+E+F+RMP RDSASL  LVSG
Sbjct: 152 KAGKMNEALKLFNCMPDKNVVSWNAVISGFLRNGDVKTAVEYFKRMPERDSASLGALVSG 211

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LIQ+ +LDEA  VL + G   DG+EDL+ AYNTLIAGYGQ+GRV +AR+LFD++P     
Sbjct: 212 LIQNEELDEAENVLYEFGESNDGKEDLIHAYNTLIAGYGQKGRVGDARRLFDKVPSYSSG 271

Query: 103 GE--GNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
            E   N RF+RN+VSWNSMIM Y+KAGD+VSARELF
Sbjct: 272 QEISRNRRFERNVVSWNSMIMAYIKAGDMVSARELF 307



 Score =  100 bits (250), Expect = 3e-19
 Identities = 53/154 (34%), Positives = 94/154 (61%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           +NG++E+A RLF  +  RN V+WN++ISG++Q  ++  A   F++MP RD  S ++++SG
Sbjct: 59  RNGRVEDARRLFGMLTHRNTVTWNSMISGYVQQREIVKARYLFDKMPQRDVVSWNLMISG 118

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
            +    L+E  ++         GR+ +  ++NT+I+GY + G++ EA KLF+ +P     
Sbjct: 119 YLSCRHLEEGRKLF----DEMPGRDFI--SWNTMISGYAKAGKMNEALKLFNCMP----- 167

Query: 103 GEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                   +N+VSWN++I  +++ GDV +A E F
Sbjct: 168 -------DKNVVSWNAVISGFLRNGDVKTAVEYF 194



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 55/168 (32%), Positives = 94/168 (55%), Gaps = 14/168 (8%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV--------------RNVVSWNTVISGFLQNGDVGNAIEFFERM 326
           + G++ +A RLF+ +P               RNVVSWN++I  +++ GD+ +A E F++M
Sbjct: 251 QKGRVGDARRLFDKVPSYSSGQEISRNRRFERNVVSWNSMIMAYIKAGDMVSARELFDQM 310

Query: 325 PLRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEE 146
             RD+ S + +VSG + + ++DEA+ + +K       R   V ++N++I+GY Q G++E 
Sbjct: 311 MERDTFSWNTMVSGYVHASNMDEASNLFSKM------RNPDVLSWNSIISGYAQTGKLEL 364

Query: 145 ARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           AR  F+++P            ++N VSWNSMI    +  D   A +LF
Sbjct: 365 ARDYFERMP------------QKNRVSWNSMISGCERNADYKGAIKLF 400



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 4/158 (2%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLR----DSASLSV 296
           + GK+E A   F  MP +N VSWN++ISG  +N D   AI+ F  M       D  +LS 
Sbjct: 358 QTGKLELARDYFERMPQKNRVSWNSMISGCERNADYKGAIKLFMEMQQAGEKPDRHTLSS 417

Query: 295 LVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPV 116
           L+S   ++  L    ++              +   N+LI  Y + G + EAR +FD    
Sbjct: 418 LLSVCAETVALFLGMQIHQLVSKTVIPD---IPLNNSLITMYARCGAIHEARTIFD---- 470

Query: 115 NCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                  N++F+++++SWN+M+  Y   G    A ELF
Sbjct: 471 -------NMKFQKDVISWNAMVGGYASHGFAFEALELF 501



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 41/131 (31%), Positives = 70/131 (53%)
 Frame = -2

Query: 394 NTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDG 215
           N  I+  ++NG V +A   F  +  R++ + + ++SG +Q  ++ +A  +  K   R   
Sbjct: 51  NKNITNLIRNGRVEDARRLFGMLTHRNTVTWNSMISGYVQQREIVKARYLFDKMPQR--- 107

Query: 214 REDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVK 35
             D+V ++N +I+GY     +EE RKLFD++P             R+ +SWN+MI  Y K
Sbjct: 108 --DVV-SWNLMISGYLSCRHLEEGRKLFDEMP------------GRDFISWNTMISGYAK 152

Query: 34  AGDVVSARELF 2
           AG +  A +LF
Sbjct: 153 AGKMNEALKLF 163


>ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539509|gb|EEF41097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 662

 Score =  209 bits (532), Expect = 7e-52
 Identities = 104/155 (67%), Positives = 126/155 (81%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KNG+M+EAL LFN MP +N VSWN ++SGFLQNGDV  AIEFF+RMP RD  SLS LVSG
Sbjct: 155 KNGRMDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSG 214

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LIQ+ +LD+A R+L   G+    +E LV AYNTLIAGYGQRGRV+EA+ LFD+IP   D+
Sbjct: 215 LIQNSELDQAERILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQ 274

Query: 103 GEGNV-RFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           G+G   RF+RN+VSWN+MIMCYVKAGDV+SAR+LF
Sbjct: 275 GKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLF 309



 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 58/167 (34%), Positives = 94/167 (56%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           + G+++EA  LF+ +P              RNVVSWNT+I  +++ GDV +A + F++MP
Sbjct: 254 QRGRVDEAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMP 313

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
            RDS S + ++SG +   D++EA+ +  K  S      D + ++N +I+GY Q G +E A
Sbjct: 314 DRDSFSWNTMISGYVHVLDMEEASNLFHKMPS-----PDTL-SWNLMISGYAQSGSLELA 367

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
              F+++P            ++N+VSWNS+I  Y K GD + A  LF
Sbjct: 368 HDFFERMP------------QKNLVSWNSVIAGYEKNGDYIGAINLF 402



 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 51/155 (32%), Positives = 91/155 (58%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           + G++ EA  LF+ +  RN V+WN++ISG+++ G++  A + F+ MP RD  S ++++SG
Sbjct: 59  RTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEMPERDVVSWNLIISG 118

Query: 283 LIQSGDLDEAARVLAKCGSRYDGR-EDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCD 107
            +         R + +  + +D   E    ++NT+I+GY + GR++EA  LF+ +P    
Sbjct: 119 YVSC----RGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGRMDEALGLFNTMP---- 170

Query: 106 RGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                   ++N VSWN+M+  +++ GDVV A E F
Sbjct: 171 --------EKNSVSWNAMVSGFLQNGDVVRAIEFF 197



 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 42/122 (34%), Positives = 70/122 (57%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           K G +  A +LF+ MP R+  SWNT+ISG++   D+  A   F +MP  D+ S ++++SG
Sbjct: 298 KAGDVISARKLFDQMPDRDSFSWNTMISGYVHVLDMEEASNLFHKMPSPDTLSWNLMISG 357

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
             QSG L+ A     +       +++LV ++N++IAGY + G    A  LF Q+ V  ++
Sbjct: 358 YAQSGSLELAHDFFERM-----PQKNLV-SWNSVIAGYEKNGDYIGAINLFIQMQVEGEK 411

Query: 103 GE 98
            +
Sbjct: 412 SD 413



 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLR----DSASLSV 296
           ++G +E A   F  MP +N+VSWN+VI+G+ +NGD   AI  F +M +     D  +LS 
Sbjct: 360 QSGSLELAHDFFERMPQKNLVSWNSVIAGYEKNGDYIGAINLFIQMQVEGEKSDRHTLSS 419

Query: 295 LVSGLIQSGDLD-EAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIP 119
           L+S  + SG +D +    + +  S+    +  V   N LI  Y + G + EAR +F +  
Sbjct: 420 LLS--VSSGIVDLQLGMQIHQLVSKTVIPD--VPLNNALITMYSRCGAIFEARTIFYE-- 473

Query: 118 VNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                    ++ ++ ++SWN+MI  Y   G    A ELF
Sbjct: 474 ---------MKLQKEVISWNAMIGGYASHGYATEALELF 503


>ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
           gi|947110031|gb|KRH58357.1| hypothetical protein
           GLYMA_05G122700 [Glycine max]
           gi|947110032|gb|KRH58358.1| hypothetical protein
           GLYMA_05G122700 [Glycine max]
          Length = 649

 Score =  206 bits (524), Expect = 6e-51
 Identities = 101/155 (65%), Positives = 125/155 (80%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KNG+M++AL+LFN MP  N VS+N VI+GFL NGDV +A+ FF  MP  DS SL  L+SG
Sbjct: 146 KNGRMDQALKLFNAMPEHNAVSYNAVITGFLLNGDVESAVGFFRTMPEHDSTSLCALISG 205

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           L+++G+LD AA +L +CG+  DG++DLV AYNTLIAGYGQRG VEEAR+LFD IP + D 
Sbjct: 206 LVRNGELDLAAGILRECGNGDDGKDDLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDDD 265

Query: 103 G-EGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           G EG  RF+RN+VSWNSM+MCYVKAGD+V ARELF
Sbjct: 266 GNEGKRRFRRNVVSWNSMMMCYVKAGDIVFARELF 300



 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 10/164 (6%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           ++G++ EA  LF+ M  R+ V+WN++ISG++Q  ++  A + F+ MP RD  S +++VSG
Sbjct: 50  RSGRISEARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPRRDVVSWNLIVSG 109

Query: 283 LIQSGDLDEAARVLAKCGSRY--DGR--------EDLVQAYNTLIAGYGQRGRVEEARKL 134
                           CGSR+  +GR         D V ++NT+I+GY + GR+++A KL
Sbjct: 110 YFSC------------CGSRFVEEGRRLFELMPQRDCV-SWNTVISGYAKNGRMDQALKL 156

Query: 133 FDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           F+ +P            + N VS+N++I  ++  GDV SA   F
Sbjct: 157 FNAMP------------EHNAVSYNAVITGFLLNGDVESAVGFF 188



 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 51/167 (30%), Positives = 91/167 (54%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           + G +EEA RLF+ +P              RNVVSWN+++  +++ GD+  A E F+RM 
Sbjct: 245 QRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYVKAGDIVFARELFDRMV 304

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
            RD+ S + L+S  +Q  +++EA+++  +  S        V ++N++I+G  Q+G +  A
Sbjct: 305 ERDNCSWNTLISCYVQISNMEEASKLFREMPS------PDVLSWNSIISGLAQKGDLNLA 358

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           +  F+++P             +N++SWN++I  Y K  D   A +LF
Sbjct: 359 KDFFERMP------------HKNLISWNTIIAGYEKNEDYKGAIKLF 393



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 32/182 (17%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           MEEA +LF  MP  +V+SWN++ISG  Q GD+  A +FFERMP ++  S + +++G  ++
Sbjct: 324 MEEASKLFREMPSPDVLSWNSIISGLAQKGDLNLAKDFFERMPHKNLISWNTIIAGYEKN 383

Query: 271 GDLDEAARVLAKC---GSRYDGR---------EDLVQAY--------------------N 188
            D   A ++ ++    G R D             LV  Y                    N
Sbjct: 384 EDYKGAIKLFSEMQLEGERPDKHTLSSVISVSTGLVDLYLGKQLHQLVTKTVLPDSPINN 443

Query: 187 TLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARE 8
           +LI  Y + G + +A  +F++I           +  +++++WN+MI  Y   G    A E
Sbjct: 444 SLITMYSRCGAIVDACTVFNEI-----------KLYKDVITWNAMIGGYASHGSAAEALE 492

Query: 7   LF 2
           LF
Sbjct: 493 LF 494


>ref|XP_011045620.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Populus euphratica]
          Length = 650

 Score =  206 bits (523), Expect = 7e-51
 Identities = 101/155 (65%), Positives = 130/155 (83%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KNG+M+EALR+F  MP  +VVSWN +++GFLQNGDV  AIE+FERMP RD+ASLS LVSG
Sbjct: 143 KNGRMDEALRIFKLMPEGDVVSWNAIVTGFLQNGDVARAIEYFERMPERDAASLSALVSG 202

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LI++G+LDEAARV+ +       +E+L+QAYNTLIAGYG+R RV+EARKLFDQ+P    +
Sbjct: 203 LIRNGELDEAARVVVRFERDGGRKENLLQAYNTLIAGYGRRDRVDEARKLFDQVPFCDGK 262

Query: 103 GE-GNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           G+ G+ R +R++VSWN+MIMCYVKAG++VSARELF
Sbjct: 263 GKGGDGRLRRDVVSWNTMIMCYVKAGNIVSARELF 297



 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 50/155 (32%), Positives = 88/155 (56%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KNG+++EA  LF+ M   N VSWN +I G+++  ++  A + F+ MP RD  S ++++ G
Sbjct: 47  KNGRIDEARALFDQMEETNTVSWNAIIRGYVKRREIAEARKLFDEMPQRDVVSWNLMIWG 106

Query: 283 LIQSGDLDEAARVLAKCGSRYDGR-EDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCD 107
            +         R L +  + +D   E  + ++N +I+GY + GR++EA ++F  +P    
Sbjct: 107 YVSC----HGIRFLKEGRNLFDRMPERDIVSWNMMISGYAKNGRMDEALRIFKLMP---- 158

Query: 106 RGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
             EG+V      VSWN+++  +++ GDV  A E F
Sbjct: 159 --EGDV------VSWNAIVTGFLQNGDVARAIEYF 185



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           +  +++EA +LF+ +P              R+VVSWNT+I  +++ G++ +A E F++M 
Sbjct: 242 RRDRVDEARKLFDQVPFCDGKGKGGDGRLRRDVVSWNTMIMCYVKAGNIVSARELFDQMM 301

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
            RD+ S + ++SG +   D+DEA+R+  +  +        + ++NT+IAG+ Q G ++  
Sbjct: 302 ERDTISWNTMISGYVNKLDMDEASRLFCEMPN------PDIFSWNTMIAGHAQIGDLDRV 355

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
              F ++P            ++N+VSWNSMI  Y K  D + A ++F
Sbjct: 356 NDFFRRMP------------QKNLVSWNSMITGYEKNDDYIGAIKIF 390



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 32/182 (17%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           M+EA RLF  MP  ++ SWNT+I+G  Q GD+    +FF RMP ++  S + +++G  ++
Sbjct: 321 MDEASRLFCEMPNPDIFSWNTMIAGHAQIGDLDRVNDFFRRMPQKNLVSWNSMITGYEKN 380

Query: 271 GDLDEAARVLAKC---GSRYD------------GREDL-----------------VQAYN 188
            D   A ++  +    G + D            G  DL                 V   N
Sbjct: 381 DDYIGAIKIFIQMQVEGEKPDRHTLSSVLSVSAGIVDLQLGMQIHQLVTKTVIPDVPIKN 440

Query: 187 TLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARE 8
            LI  Y + G + EA  +FD+           V+ ++ ++SWN+MI  Y   G  + A E
Sbjct: 441 ALITMYSRCGAIIEAGTIFDE-----------VKLQKEVISWNAMIGGYASHGYAMEALE 489

Query: 7   LF 2
           +F
Sbjct: 490 VF 491


>ref|XP_002312939.2| hypothetical protein POPTR_0009s14110g [Populus trichocarpa]
           gi|550331692|gb|EEE86894.2| hypothetical protein
           POPTR_0009s14110g [Populus trichocarpa]
          Length = 611

 Score =  206 bits (523), Expect = 7e-51
 Identities = 102/155 (65%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KNG+M+EALR+F  MP  +VVSWN +++GFLQNGDV  A+E+FERMP RD+ASLS LVSG
Sbjct: 104 KNGRMDEALRMFKLMPEGDVVSWNAIVTGFLQNGDVARALEYFERMPERDAASLSALVSG 163

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LI++G+LDEAARV+ +       +E+L+QAYNTLIAGYG+R RV+EARKLFDQIP    +
Sbjct: 164 LIRNGELDEAARVVVRFERDGGRKENLLQAYNTLIAGYGRRDRVDEARKLFDQIPFCDGK 223

Query: 103 GE-GNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           G+ G+ RF RN+VSWN+MIMCYVKAG++V ARELF
Sbjct: 224 GKGGDGRFGRNVVSWNTMIMCYVKAGNIVFARELF 258



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 51/155 (32%), Positives = 89/155 (57%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           KNG+++EA  LF+ M   N VSWN +I  +++  ++  A + F+ MP RD  S ++++SG
Sbjct: 8   KNGRIDEARALFDQMEETNTVSWNAIIRAYVKRREIAKARKLFDEMPQRDIVSWNLMISG 67

Query: 283 LIQSGDLDEAARVLAKCGSRYDGR-EDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCD 107
            +         R L +  + +D   E  + ++NT+I+GY + GR++EA ++F  +P    
Sbjct: 68  YVSC----HGIRFLKEGRNLFDRMPERDIVSWNTMISGYAKNGRMDEALRMFKLMP---- 119

Query: 106 RGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
             EG+V      VSWN+++  +++ GDV  A E F
Sbjct: 120 --EGDV------VSWNAIVTGFLQNGDVARALEYF 146



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 50/167 (29%), Positives = 91/167 (54%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           +  +++EA +LF+ +P              RNVVSWNT+I  +++ G++  A E F++M 
Sbjct: 203 RRDRVDEARKLFDQIPFCDGKGKGGDGRFGRNVVSWNTMIMCYVKAGNIVFARELFDQMM 262

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
            RD+ S + ++SG +   D+DEA+R+  +  +        + ++N +IAG+ Q G ++  
Sbjct: 263 ERDTISWNTMISGYVNMLDMDEASRLFCEMPN------PDIFSWNKMIAGHAQIGDLDRV 316

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
             LF ++P            ++N+VSWNS+I  Y K  D + A ++F
Sbjct: 317 NDLFGRMP------------QKNLVSWNSVITGYEKNDDYIGAIKIF 351



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 32/182 (17%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           M+EA RLF  MP  ++ SWN +I+G  Q GD+    + F RMP ++  S + +++G  ++
Sbjct: 282 MDEASRLFCEMPNPDIFSWNKMIAGHAQIGDLDRVNDLFGRMPQKNLVSWNSVITGYEKN 341

Query: 271 GDLDEAARVLAKC---GSRYD------------GREDL-----------------VQAYN 188
            D   A ++  +    G + D            G  DL                 V   N
Sbjct: 342 DDYIGAIKIFIQMQVEGEKPDRHTLSSVLSVSAGIVDLQLGMQIHQLVTKTVIPDVPINN 401

Query: 187 TLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARE 8
            LI  Y + G + EA  +FD+           V+ ++ ++SWN+MI  Y   G  V A E
Sbjct: 402 ALITMYSRCGAIIEAGTIFDE-----------VKLQKEVISWNAMIGGYASHGYAVEALE 450

Query: 7   LF 2
           +F
Sbjct: 451 VF 452


>ref|XP_012436400.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Gossypium raimondii]
           gi|763780647|gb|KJB47718.1| hypothetical protein
           B456_008G037800 [Gossypium raimondii]
          Length = 644

 Score =  205 bits (521), Expect = 1e-50
 Identities = 97/155 (62%), Positives = 130/155 (83%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           K+G+M+EA+RLF  MP RNVVSWN +++GF +NGD  +A ++FERMP RDSAS++  VSG
Sbjct: 137 KSGRMDEAIRLFESMPERNVVSWNAMVTGFFRNGDTLSATQYFERMPERDSASVNAFVSG 196

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           L+Q+G+LDEAARVL +CG+R    EDL+ + NTLIAGYGQ+GRV++AR+LF+QIP N  +
Sbjct: 197 LVQNGELDEAARVLIECGNRDGWSEDLIPSCNTLIAGYGQKGRVDDARRLFNQIPFNSVQ 256

Query: 103 GEG-NVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
            +G N  F+RN+V+WNSMIMC+VKAGD++SARELF
Sbjct: 257 ADGRNGVFERNVVTWNSMIMCHVKAGDILSARELF 291



 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 52/157 (33%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           + GK+ EA  +F+ M  RN V+WN++ISG ++  ++  A + F+ MP RD  S ++++SG
Sbjct: 41  RTGKIHEARSMFDKMGERNTVTWNSMISGHVKRREMTQARKLFDEMPERDIVSWNLMISG 100

Query: 283 ---LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVN 113
               + +  L+E  ++  +       R D+V ++NT+I+GY + GR++EA +LF+ +P  
Sbjct: 101 YASYLGNKFLEEGKKLFEQM-----PRRDVV-SWNTMISGYAKSGRMDEAIRLFESMP-- 152

Query: 112 CDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                     +RN+VSWN+M+  + + GD +SA + F
Sbjct: 153 ----------ERNVVSWNAMVTGFFRNGDTLSATQYF 179



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 48/167 (28%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV-------------RNVVSWNTVISGFLQNGDVGNAIEFFERMP 323
           + G++++A RLFN +P              RNVV+WN++I   ++ GD+ +A E F++M 
Sbjct: 236 QKGRVDDARRLFNQIPFNSVQADGRNGVFERNVVTWNSMIMCHVKAGDILSARELFDQMV 295

Query: 322 LRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEA 143
            +D+ S + +++G +Q  D++EA  +        +       ++N++I+GY Q G++E A
Sbjct: 296 DKDTISWNTMINGYVQILDMEEALNLFNMMPKPDN------MSWNSMISGYAQMGKLELA 349

Query: 142 RKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           R  F+ +P            ++++VSWN++I  Y K  D   A + F
Sbjct: 350 RDYFEMMP------------QKHLVSWNTLIAGYEKNEDYKGAIKFF 384



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
 Frame = -2

Query: 457 GKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLI 278
           GK+E A   F  MP +++VSWNT+I+G+ +N D   AI+FF RM             G  
Sbjct: 344 GKLELARDYFEMMPQKHLVSWNTLIAGYEKNEDYKGAIKFFIRM------------LGEG 391

Query: 277 QSGDLDEAARVLAKCGSRYDGREDL-------------VQAYNTLIAGYGQRGRVEEARK 137
           +  D    + VL+ C    D +  +             V   N+LI  Y + G + E+R 
Sbjct: 392 EKPDRHTLSSVLSVCTGLVDMQLGMQIHQLVSKTVIPDVPIQNSLITMYSRCGALVESRT 451

Query: 136 LFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           +FD++           +  ++++SWN+MI  Y   G  + A   F
Sbjct: 452 IFDEL-----------KSPKDVISWNAMIGGYASHGFALEALGFF 485


>ref|XP_009771109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Nicotiana sylvestris]
           gi|698557754|ref|XP_009771110.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Nicotiana sylvestris]
          Length = 660

 Score =  205 bits (521), Expect = 1e-50
 Identities = 103/157 (65%), Positives = 125/157 (79%), Gaps = 3/157 (1%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           K GKM EAL+LFNCMP +NVVSWN VISGFL+NGDV  A+E+F+RMP RDSASL  LVSG
Sbjct: 152 KAGKMNEALKLFNCMPDKNVVSWNAVISGFLRNGDVKTAVEYFKRMPERDSASLGALVSG 211

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
           LIQ+ +LDEA  VL + G   DG EDL+ AYNTLIAGYGQ+GR  +AR+LFD++P +   
Sbjct: 212 LIQNEELDEAENVLYEFGESNDGTEDLIHAYNTLIAGYGQKGRAGDARRLFDKVP-SYSS 270

Query: 103 GEG---NVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
            +G     RF+RN+VSWNSMIM Y+KAGD+VS+RELF
Sbjct: 271 AQGISRKKRFERNVVSWNSMIMAYIKAGDMVSSRELF 307



 Score =  103 bits (258), Expect = 4e-20
 Identities = 56/154 (36%), Positives = 95/154 (61%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSG 284
           +NG++E+A RLF  +  RN V+WN++ISG++Q  ++  A   F++MP RD  S +V++SG
Sbjct: 59  RNGRVEDARRLFGMLTHRNTVTWNSMISGYVQQREIVKARYLFDKMPQRDVVSWNVMISG 118

Query: 283 LIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDR 104
            +    L+E  ++  +  SR     D V ++NT+I+GY + G++ EA KLF+ +P     
Sbjct: 119 YLSCRHLEEGRKLFDEMPSR-----DFV-SWNTMISGYAKAGKMNEALKLFNCMP----- 167

Query: 103 GEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
                   +N+VSWN++I  +++ GDV +A E F
Sbjct: 168 -------DKNVVSWNAVISGFLRNGDVKTAVEYF 194



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 55/168 (32%), Positives = 93/168 (55%), Gaps = 14/168 (8%)
 Frame = -2

Query: 463 KNGKMEEALRLFNCMPV--------------RNVVSWNTVISGFLQNGDVGNAIEFFERM 326
           + G+  +A RLF+ +P               RNVVSWN++I  +++ GD+ ++ E F++M
Sbjct: 251 QKGRAGDARRLFDKVPSYSSAQGISRKKRFERNVVSWNSMIMAYIKAGDMVSSRELFDQM 310

Query: 325 PLRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDGREDLVQAYNTLIAGYGQRGRVEE 146
             RD+ S + +VSG + + ++DEA+ + +K       R   V ++N++I+GY Q G++E 
Sbjct: 311 TERDTFSWNTMVSGYVHASNMDEASNLFSKM------RNPDVLSWNSIISGYAQTGKLEL 364

Query: 145 ARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSARELF 2
           AR  F+++P            +RN VSWNSMI    +  D   A +LF
Sbjct: 365 ARDYFERMP------------QRNRVSWNSMISGCERNADYKGAIKLF 400



 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 33/183 (18%)
 Frame = -2

Query: 451 MEEALRLFNCMPVRNVVSWNTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQS 272
           M+EA  LF+ M   +V+SWN++ISG+ Q G +  A ++FERMP R+  S + ++SG  ++
Sbjct: 331 MDEASNLFSKMRNPDVLSWNSIISGYAQTGKLELARDYFERMPQRNRVSWNSMISGCERN 390

Query: 271 GDLDEAARV---LAKCGSRYDGREDL------------------------------VQAY 191
            D   A ++   + + G + D R  L                              +   
Sbjct: 391 ADYKGAIKLFMEMQQAGEKPD-RHTLSSLLSVCAETVALFLGMQIHQLVSKTVIPDIPLN 449

Query: 190 NTLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVKAGDVVSAR 11
           N+LI  Y + G + EAR +FD           N++F+++++SWN+M+  Y   G    A 
Sbjct: 450 NSLITMYARCGAIHEARTIFD-----------NMKFQKDVISWNAMVGGYASHGFAFEAL 498

Query: 10  ELF 2
           ELF
Sbjct: 499 ELF 501



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 42/131 (32%), Positives = 70/131 (53%)
 Frame = -2

Query: 394 NTVISGFLQNGDVGNAIEFFERMPLRDSASLSVLVSGLIQSGDLDEAARVLAKCGSRYDG 215
           N  I+  ++NG V +A   F  +  R++ + + ++SG +Q  ++ +A  +  K   R   
Sbjct: 51  NKNITNLIRNGRVEDARRLFGMLTHRNTVTWNSMISGYVQQREIVKARYLFDKMPQR--- 107

Query: 214 REDLVQAYNTLIAGYGQRGRVEEARKLFDQIPVNCDRGEGNVRFKRNIVSWNSMIMCYVK 35
             D+V ++N +I+GY     +EE RKLFD++P             R+ VSWN+MI  Y K
Sbjct: 108 --DVV-SWNVMISGYLSCRHLEEGRKLFDEMP------------SRDFVSWNTMISGYAK 152

Query: 34  AGDVVSARELF 2
           AG +  A +LF
Sbjct: 153 AGKMNEALKLF 163