BLASTX nr result
ID: Zanthoxylum22_contig00024278
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00024278
(308 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006384788.1| hypothetical protein POPTR_0004s21110g [Popu... 50 4e-12
ref|XP_011006755.1| PREDICTED: pentatricopeptide repeat-containi... 50 4e-12
ref|XP_011043224.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 51 1e-11
ref|XP_006421694.1| hypothetical protein CICLE_v10004237mg [Citr... 67 4e-09
gb|KDO65447.1| hypothetical protein CISIN_1g043758mg, partial [C... 66 9e-09
ref|XP_006490098.1| PREDICTED: pentatricopeptide repeat-containi... 66 9e-09
ref|XP_007038409.1| Tetratricopeptide repeat-like superfamily pr... 60 6e-07
ref|XP_010264207.1| PREDICTED: pentatricopeptide repeat-containi... 41 3e-06
ref|XP_010264208.1| PREDICTED: pentatricopeptide repeat-containi... 41 3e-06
>ref|XP_006384788.1| hypothetical protein POPTR_0004s21110g [Populus trichocarpa]
gi|550341556|gb|ERP62585.1| hypothetical protein
POPTR_0004s21110g [Populus trichocarpa]
Length = 1025
Score = 50.1 bits (118), Expect(2) = 4e-12
Identities = 27/53 (50%), Positives = 32/53 (60%)
Frame = -2
Query: 307 EVIEVFDIIRKRKGLEPTLSQYKCLFYGHCKREPIMEVESCAREMELQCFYVE 149
E IEV DI+ + GL PTL K LFYG CKR +E E EME Q F+V+
Sbjct: 215 EAIEVLDIMCRITGLPPTLHMLKTLFYGLCKRGWSIEAEWIFEEMEAQGFFVD 267
Score = 47.4 bits (111), Expect(2) = 4e-12
Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Frame = -3
Query: 147 FSSLISGYCRHKKMKMAMRLYCRV----GDPDTYTCNTLIRGF 31
++SL++ Y R KKMKMA+R+Y R+ DPD TCNTLI GF
Sbjct: 271 YTSLMNAYGRDKKMKMALRVYFRMLKNGYDPDICTCNTLIYGF 313
>ref|XP_011006755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Populus euphratica]
Length = 664
Score = 50.1 bits (118), Expect(2) = 4e-12
Identities = 27/53 (50%), Positives = 32/53 (60%)
Frame = -2
Query: 307 EVIEVFDIIRKRKGLEPTLSQYKCLFYGHCKREPIMEVESCAREMELQCFYVE 149
E IEV DI+ + GL PTL K LFYG CKR +E E EME Q F+V+
Sbjct: 215 EAIEVLDIMCRITGLPPTLHMLKTLFYGLCKRGWSIEAEWIFEEMEAQGFFVD 267
Score = 47.4 bits (111), Expect(2) = 4e-12
Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Frame = -3
Query: 147 FSSLISGYCRHKKMKMAMRLYCRV----GDPDTYTCNTLIRGF 31
++SL++ Y + KKMKMAMR+Y R+ DPD TCNTLI GF
Sbjct: 271 YTSLMNAYGKDKKMKMAMRVYFRMLKNGYDPDICTCNTLIYGF 313
>ref|XP_011043224.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g62370-like [Populus euphratica]
Length = 887
Score = 51.2 bits (121), Expect(2) = 1e-11
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = -2
Query: 307 EVIEVFDIIRKRKGLEPTLSQYKCLFYGHCKREPIMEVESCAREMELQCFYVE 149
+ I+VFD + KR GL PTL +K LF+G C+ ++E E EME+Q F+V+
Sbjct: 215 QAIQVFDTMCKRTGLPPTLHMFKTLFFGLCEAGWLVEAELIFEEMEVQGFFVD 267
Score = 45.1 bits (105), Expect(2) = 1e-11
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Frame = -3
Query: 147 FSSLISGYCRHKKMKMAMRLYCRV----GDPDTYTCNTLIRGFL 28
++SL++ + ++KKMKMAMR+Y R+ DPD T NTLI GFL
Sbjct: 271 YTSLMNAHSKNKKMKMAMRVYFRMLKKGCDPDICTYNTLIHGFL 314
>ref|XP_006421694.1| hypothetical protein CICLE_v10004237mg [Citrus clementina]
gi|557523567|gb|ESR34934.1| hypothetical protein
CICLE_v10004237mg [Citrus clementina]
Length = 1004
Score = 67.4 bits (163), Expect = 4e-09
Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Frame = -2
Query: 307 EVIEVFDIIRKRKGLEPTLSQYKCLFYGHCKREPIMEVESCAREMELQCFYVEV*FFD*W 128
EV+EV +I+RK+KGL P L YK LFY CK +E ES AREME Q FYV+ +
Sbjct: 223 EVLEVVNIMRKKKGLVPALHPYKSLFYALCKNRRTVEAESFAREMESQGFYVDKLMYTSL 282
Query: 127 VLQA*EDENGNATLLQGRGSRYIYL*HI------DSWV--------FKMGLFDKGW 2
+ NG + + + ++ + DS+ FKMGLFDKGW
Sbjct: 283 I-------NGYCSNRNMKMAMRLFFRMLKTGCEPDSYTCNTLIHGFFKMGLFDKGW 331
>gb|KDO65447.1| hypothetical protein CISIN_1g043758mg, partial [Citrus sinensis]
Length = 918
Score = 66.2 bits (160), Expect = 9e-09
Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Frame = -2
Query: 307 EVIEVFDIIRKRKGLEPTLSQYKCLFYGHCKREPIMEVESCAREMELQCFYVEV*FFD*W 128
EV+EV +I+RK+KGL P L YK LFY CK +E ES AREME Q FYV+ +
Sbjct: 150 EVLEVVNIMRKKKGLVPALHPYKSLFYALCKNIRTVEAESFAREMESQGFYVDKLMYTSL 209
Query: 127 VLQA*EDENGNATLLQGRGSRYIYL*HI------DSWV--------FKMGLFDKGW 2
+ NG + + + ++ + DS+ FKMGLFDKGW
Sbjct: 210 I-------NGYCSNRNMKMAMRLFFRMLKTGCEPDSYTCNTLIHGFFKMGLFDKGW 258
>ref|XP_006490098.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like isoform X1 [Citrus sinensis]
gi|568873973|ref|XP_006490099.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g62370-like isoform X2 [Citrus sinensis]
gi|568873975|ref|XP_006490100.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g62370-like isoform X3 [Citrus sinensis]
Length = 1004
Score = 66.2 bits (160), Expect = 9e-09
Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Frame = -2
Query: 307 EVIEVFDIIRKRKGLEPTLSQYKCLFYGHCKREPIMEVESCAREMELQCFYVEV*FFD*W 128
EV+EV +I+RK+KGL P L YK LFY CK +E ES AREME Q FYV+ +
Sbjct: 223 EVLEVVNIMRKKKGLVPALHPYKSLFYALCKNIRTVEAESFAREMESQGFYVDKLMYTSL 282
Query: 127 VLQA*EDENGNATLLQGRGSRYIYL*HI------DSWV--------FKMGLFDKGW 2
+ NG + + + ++ + DS+ FKMGLFDKGW
Sbjct: 283 I-------NGYCSNRNMKMAMRLFFRMLKTGCEPDSYTCNTLIHGFFKMGLFDKGW 331
>ref|XP_007038409.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
1 [Theobroma cacao] gi|590671720|ref|XP_007038410.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|590671723|ref|XP_007038411.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508775654|gb|EOY22910.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508775655|gb|EOY22911.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508775656|gb|EOY22912.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 1003
Score = 60.1 bits (144), Expect = 6e-07
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Frame = -2
Query: 307 EVIEVFDIIRKRKGLEPTLSQYKCLFYGHCKREPIMEVESCAREMELQCFYVEV*FFD*W 128
E I++FD++R+ GL PTL YK LFYG CK ++E E E+E Q FYV+ +
Sbjct: 216 EAIQMFDLMRETAGLSPTLHLYKSLFYGLCKHGWVLEAEFLIGEIESQGFYVDRTMYTSL 275
Query: 127 VLQA*EDENGNATL--------LQGRGSRYIYL*HIDSWVFKMGLFDKGW 2
+ + +D + Y Y I +V KMGLFD+GW
Sbjct: 276 IKEYCKDRKMKMAMRIYLRMLKTGCEPDSYTYNTLIHGFV-KMGLFDQGW 324
>ref|XP_010264207.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
isoform X1 [Nelumbo nucifera]
Length = 1000
Score = 40.8 bits (94), Expect(2) = 3e-06
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Frame = -3
Query: 147 FSSLISGYCRHKKMKMAMRLYCRV----GDPDTYTCNTLIRGFLR 25
++SLI GYC+ KM+MA ++ R+ +PD+Y NTL+ G+ R
Sbjct: 286 YTSLIYGYCKEMKMEMAKAVFKRMLETGWEPDSYAYNTLMYGYFR 330
Score = 37.0 bits (84), Expect(2) = 3e-06
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -2
Query: 307 EVIEVFDIIRKRKGLEPTLSQYKCLFYGHCKREPIMEVESCAREME 170
E ++VF + R G PT+ YK L Y CKR E ES EME
Sbjct: 231 EALQVFKTMT-RAGTRPTIHLYKSLVYNFCKRGRTKEAESLCGEME 275
>ref|XP_010264208.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
isoform X2 [Nelumbo nucifera]
Length = 911
Score = 40.8 bits (94), Expect(2) = 3e-06
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Frame = -3
Query: 147 FSSLISGYCRHKKMKMAMRLYCRV----GDPDTYTCNTLIRGFLR 25
++SLI GYC+ KM+MA ++ R+ +PD+Y NTL+ G+ R
Sbjct: 197 YTSLIYGYCKEMKMEMAKAVFKRMLETGWEPDSYAYNTLMYGYFR 241
Score = 37.0 bits (84), Expect(2) = 3e-06
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -2
Query: 307 EVIEVFDIIRKRKGLEPTLSQYKCLFYGHCKREPIMEVESCAREME 170
E ++VF + R G PT+ YK L Y CKR E ES EME
Sbjct: 142 EALQVFKTMT-RAGTRPTIHLYKSLVYNFCKRGRTKEAESLCGEME 186