BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00024228
         (780 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006421716.1| hypothetical protein CICLE_v10004726mg [Citr...   395   e-107
ref|XP_006490089.1| PREDICTED: pentatricopeptide repeat-containi...   390   e-106
ref|XP_012090758.1| PREDICTED: pentatricopeptide repeat-containi...   360   5e-97
gb|KDP22405.1| hypothetical protein JCGZ_26236 [Jatropha curcas]      360   5e-97
ref|XP_002322407.2| hypothetical protein POPTR_0015s14630g [Popu...   350   6e-94
ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi...   344   5e-92
ref|XP_011041723.1| PREDICTED: pentatricopeptide repeat-containi...   341   4e-91
ref|XP_007038424.1| Tetratricopeptide repeat-like superfamily pr...   340   7e-91
gb|AHB18407.1| pentatricopeptide repeat-containing protein [Goss...   338   3e-90
ref|XP_008377840.1| PREDICTED: pentatricopeptide repeat-containi...   336   9e-90
ref|XP_012439159.1| PREDICTED: pentatricopeptide repeat-containi...   335   2e-89
gb|KJB51454.1| hypothetical protein B456_008G216900 [Gossypium r...   335   2e-89
ref|XP_009374559.1| PREDICTED: pentatricopeptide repeat-containi...   330   5e-88
ref|XP_009374508.1| PREDICTED: pentatricopeptide repeat-containi...   330   7e-88
ref|XP_007219319.1| hypothetical protein PRUPE_ppa019039mg [Prun...   330   9e-88
ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arab...   328   2e-87
ref|XP_008234381.1| PREDICTED: pentatricopeptide repeat-containi...   328   3e-87
ref|XP_010448452.1| PREDICTED: pentatricopeptide repeat-containi...   327   7e-87
ref|NP_194257.1| pentatricopeptide repeat protein OTP70 [Arabido...   326   1e-86
ref|XP_010056362.1| PREDICTED: pentatricopeptide repeat-containi...   325   2e-86

>ref|XP_006421716.1| hypothetical protein CICLE_v10004726mg [Citrus clementina]
            gi|557523589|gb|ESR34956.1| hypothetical protein
            CICLE_v10004726mg [Citrus clementina]
          Length = 526

 Score =  395 bits (1014), Expect = e-107
 Identities = 193/243 (79%), Positives = 212/243 (87%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            FRGMI NG +PD               IGA+VHGWVLRRGVEWDL IANSLIVVYSK+GK
Sbjct: 283  FRGMILNGFDPDPVAISSILANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGK 342

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            L+QACWLFDHMP KDVVSWNSII AHSK+ +VL YFEQME+DG+LPDHITFVSLLSACAH
Sbjct: 343  LDQACWLFDHMPQKDVVSWNSIIHAHSKDHEVLIYFEQMERDGVLPDHITFVSLLSACAH 402

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
            LG VKDG+RLFSVM EKY I+  VEHYACMVNLYGRAGLI+EAY+MI+E+MEFEASPV+W
Sbjct: 403  LGSVKDGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVW 462

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GALLYACYLHGNV +GE AAQKLFELEPDNEHNFELL++IY N GRL+DVERVERMLVDR
Sbjct: 463  GALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNGGRLDDVERVERMLVDR 522

Query: 60   GLE 52
            GLE
Sbjct: 523  GLE 525



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 39/132 (29%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDVVS--WNSIISAH 523
           G ++H  +    +  +  I++ L+ +Y+  G +++A  +FD M  +   +  WNS+IS +
Sbjct: 110 GIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGY 169

Query: 522 SK----EPQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRL------FSVMRE 373
           ++    E  +  YF QME++G+ PD  TF  +L ACA LGL++ G+++      F    +
Sbjct: 170 AELGEYEDAIALYF-QMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFD 228

Query: 372 KYRITAIVEHYA 337
            + + A+V+ YA
Sbjct: 229 GFVLNALVDMYA 240


>ref|XP_006490089.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
            chloroplastic-like [Citrus sinensis]
            gi|641846547|gb|KDO65430.1| hypothetical protein
            CISIN_1g009782mg [Citrus sinensis]
          Length = 526

 Score =  390 bits (1003), Expect = e-106
 Identities = 191/243 (78%), Positives = 211/243 (86%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            FRGMI NG +PD               IGA+VHGWVLRRGVEWDL IANSLIVVYSK+GK
Sbjct: 283  FRGMILNGFDPDPVAISSILANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGK 342

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            L+QACWLFDHMP KDVVSWNSII AHSK+ + L YFEQME+DG+LPDH+TFVSLLSACAH
Sbjct: 343  LDQACWLFDHMPQKDVVSWNSIIHAHSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAH 402

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
            LG VK G+RLFSVM EKY I+  VEHYACMVNLYGRAGLI+EAY+MI+E+MEFEASPV+W
Sbjct: 403  LGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVW 462

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GALLYACYLHGNV +GE AAQKLFELEPDNEHNFELL++IY NAGRL+DVERVERMLVDR
Sbjct: 463  GALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDR 522

Query: 60   GLE 52
            GLE
Sbjct: 523  GLE 525



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 39/132 (29%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDVVS--WNSIISAH 523
           G ++H  +    +  +  I++ L+ +Y+  G +++A  +FD M  +   +  WNS+IS +
Sbjct: 110 GIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGY 169

Query: 522 SK----EPQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRL------FSVMRE 373
           ++    E  +  YF QME++G+ PD  TF  +L ACA LGL++ G+++      F    +
Sbjct: 170 AELGEYEDAIALYF-QMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFD 228

Query: 372 KYRITAIVEHYA 337
            + + A+V+ YA
Sbjct: 229 GFVLNALVDMYA 240


>ref|XP_012090758.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
            chloroplastic [Jatropha curcas]
          Length = 801

 Score =  360 bits (925), Expect = 5e-97
 Identities = 172/242 (71%), Positives = 202/242 (83%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            FR M+Q G+E D               +G ++HGW+LRRG+EWDL IANSLIVVYS NGK
Sbjct: 560  FRSMLQAGVELDSVAISSVLAKVTSLKLGVQIHGWILRRGMEWDLCIANSLIVVYSSNGK 619

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            L+QA WLFD+M  +DVVSWNSIISAH K+P+VL YFE+MEKDG+LPD+ITFVS+LSACAH
Sbjct: 620  LDQARWLFDNMLERDVVSWNSIISAHHKDPEVLTYFERMEKDGVLPDNITFVSILSACAH 679

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
            LGLV DG+RLFS+M EKY I  I+EHYACMVNLYGRAGLI +AYA+I  +MEF+A P  W
Sbjct: 680  LGLVTDGERLFSLMSEKYGIKPIMEHYACMVNLYGRAGLIKDAYAIIANKMEFDAGPTAW 739

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GALLYACYLHGNVDIGEIAAQ LFELEPDN+HNFELLM+IY +AGRLEDV++V+ M+VDR
Sbjct: 740  GALLYACYLHGNVDIGEIAAQSLFELEPDNKHNFELLMKIYSDAGRLEDVKKVKTMMVDR 799

Query: 60   GL 55
            GL
Sbjct: 800  GL 801



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 48/171 (28%), Positives = 93/171 (54%), Gaps = 8/171 (4%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKD--VVSWNSIISAH 523
           G R+H  +    +  +  I++ L+ +Y+  G++++A  LFD M  +D    +WNS+I+ +
Sbjct: 387 GIRIHQLIPTNLLRKNTGISSKLLRLYASCGQMDEAHQLFDQMCKRDESAFAWNSLIAGY 446

Query: 522 SK----EPQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFSVMREKYRITA 355
           ++    E  +  YF QME++G+ PD  TF  +L  C  LG+++ G+   +V R+  R+  
Sbjct: 447 AELGLYEDAIALYF-QMEEEGVEPDQFTFPRVLKVCGGLGMIQVGE---AVHRDIVRLGL 502

Query: 354 IVEHYA--CMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHG 208
             + +    +V++Y + G I +A   I +++  + S V W ++L     HG
Sbjct: 503 ANDEFVLNALVDMYAKCGDIVKA-RRIFDKISCKVS-VSWNSMLTGYLRHG 551


>gb|KDP22405.1| hypothetical protein JCGZ_26236 [Jatropha curcas]
          Length = 524

 Score =  360 bits (925), Expect = 5e-97
 Identities = 172/242 (71%), Positives = 202/242 (83%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            FR M+Q G+E D               +G ++HGW+LRRG+EWDL IANSLIVVYS NGK
Sbjct: 283  FRSMLQAGVELDSVAISSVLAKVTSLKLGVQIHGWILRRGMEWDLCIANSLIVVYSSNGK 342

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            L+QA WLFD+M  +DVVSWNSIISAH K+P+VL YFE+MEKDG+LPD+ITFVS+LSACAH
Sbjct: 343  LDQARWLFDNMLERDVVSWNSIISAHHKDPEVLTYFERMEKDGVLPDNITFVSILSACAH 402

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
            LGLV DG+RLFS+M EKY I  I+EHYACMVNLYGRAGLI +AYA+I  +MEF+A P  W
Sbjct: 403  LGLVTDGERLFSLMSEKYGIKPIMEHYACMVNLYGRAGLIKDAYAIIANKMEFDAGPTAW 462

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GALLYACYLHGNVDIGEIAAQ LFELEPDN+HNFELLM+IY +AGRLEDV++V+ M+VDR
Sbjct: 463  GALLYACYLHGNVDIGEIAAQSLFELEPDNKHNFELLMKIYSDAGRLEDVKKVKTMMVDR 522

Query: 60   GL 55
            GL
Sbjct: 523  GL 524



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 48/171 (28%), Positives = 93/171 (54%), Gaps = 8/171 (4%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKD--VVSWNSIISAH 523
           G R+H  +    +  +  I++ L+ +Y+  G++++A  LFD M  +D    +WNS+I+ +
Sbjct: 110 GIRIHQLIPTNLLRKNTGISSKLLRLYASCGQMDEAHQLFDQMCKRDESAFAWNSLIAGY 169

Query: 522 SK----EPQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFSVMREKYRITA 355
           ++    E  +  YF QME++G+ PD  TF  +L  C  LG+++ G+   +V R+  R+  
Sbjct: 170 AELGLYEDAIALYF-QMEEEGVEPDQFTFPRVLKVCGGLGMIQVGE---AVHRDIVRLGL 225

Query: 354 IVEHYA--CMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHG 208
             + +    +V++Y + G I +A   I +++  + S V W ++L     HG
Sbjct: 226 ANDEFVLNALVDMYAKCGDIVKA-RRIFDKISCKVS-VSWNSMLTGYLRHG 274


>ref|XP_002322407.2| hypothetical protein POPTR_0015s14630g [Populus trichocarpa]
            gi|550322722|gb|EEF06534.2| hypothetical protein
            POPTR_0015s14630g [Populus trichocarpa]
          Length = 529

 Score =  350 bits (898), Expect = 6e-94
 Identities = 167/242 (69%), Positives = 195/242 (80%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            F  M+ +G+E D               +  ++HGW++RRG+EWD SIANSLI VYS   K
Sbjct: 288  FHSMVHDGMELDSVAVSTILANVSSFEVAVQIHGWIVRRGMEWDFSIANSLIAVYSNGRK 347

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            L++A WLFDHMP KD+VSWNSIISAH K+ + L YFE ME+DG LPD ITFVSLLSACAH
Sbjct: 348  LDRARWLFDHMPKKDIVSWNSIISAHCKDLKALTYFELMERDGALPDKITFVSLLSACAH 407

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
            LGLVKDG+RLFS+M+ KY+I  I+EHYACMVNLYGRAGLINEAYA+I +QMEFEA P +W
Sbjct: 408  LGLVKDGERLFSLMKAKYQINPIMEHYACMVNLYGRAGLINEAYAIIRDQMEFEAGPTVW 467

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GALLY+CYLH NVD GEIAAQ LF+LEPDNEHNFELLM+IY NAGRLED ERV +M+VDR
Sbjct: 468  GALLYSCYLHRNVDTGEIAAQYLFDLEPDNEHNFELLMKIYDNAGRLEDAERVRKMMVDR 527

Query: 60   GL 55
            GL
Sbjct: 528  GL 529



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 55/226 (24%), Positives = 108/226 (47%), Gaps = 11/226 (4%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVK--DVVSWNSIISAH 523
           G ++H  +    +  +  I++ L+ +YS  G +  A  +FD M  +      WNS+I+ +
Sbjct: 115 GVKIHRLIPINLLRRNAGISSKLVRLYSSCGDVEVAHQVFDEMFKRGESAFPWNSLIAGY 174

Query: 522 SKE---PQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFSVMREKYRITAI 352
           ++       +A + QME++G+ PD  TF  +L AC  +GL++ G+   +V R+  R+  +
Sbjct: 175 TESGLYEDAMALYFQMEEEGVEPDQFTFPRVLKACGGIGLIRIGE---AVHRDLVRLGFV 231

Query: 351 VEHYA--CMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHGNVDIGEIAAQ 178
            + +    +V++Y + G I +A   I ++++ + S + W ++L     HG      + A+
Sbjct: 232 NDGFVLNALVDMYAKCGDIVKA-RRIFDKIDCKDS-ISWNSMLTGYIRHG------LIAE 283

Query: 177 KLFELEPDNEHNFEL----LMRIYRNAGRLEDVERVERMLVDRGLE 52
            L           EL    +  I  N    E   ++   +V RG+E
Sbjct: 284 ALHTFHSMVHDGMELDSVAVSTILANVSSFEVAVQIHGWIVRRGME 329


>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic [Vitis vinifera]
           gi|296084180|emb|CBI24568.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  344 bits (882), Expect = 5e-92
 Identities = 163/243 (67%), Positives = 194/243 (79%)
 Frame = -1

Query: 780 FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
           FR M+Q G EPD               +  ++HGWVLRRGV+W+LSIANSLIV+YS +GK
Sbjct: 271 FRRMLQYGFEPDAVAISTVVTGVPSLKLAGQIHGWVLRRGVQWNLSIANSLIVLYSNHGK 330

Query: 600 LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
           L+QACWLFDHMP +DVVSWNSIISAH K+ + + YF +M+K  +LPD +TFVSLLSACAH
Sbjct: 331 LDQACWLFDHMPERDVVSWNSIISAHRKDLKAITYFSRMQKADVLPDVVTFVSLLSACAH 390

Query: 420 LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
           LGLVKDG+ LFS+MRE Y +   +EHYACMVNLYGRAGLI EAY +I ++MEFEA P +W
Sbjct: 391 LGLVKDGEGLFSMMREDYGMIPSMEHYACMVNLYGRAGLIEEAYEIIEKRMEFEAGPTVW 450

Query: 240 GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
           GALLYACY H NVDIG+IAA+ LFELEPDNEHNFELLM IYRN GRLEDVE+V +M+ DR
Sbjct: 451 GALLYACYFHHNVDIGKIAAECLFELEPDNEHNFELLMNIYRNVGRLEDVEKVRKMMADR 510

Query: 60  GLE 52
           G +
Sbjct: 511 GFD 513



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKD--VVSWNSIISAH 523
           G R+H  +    +   +++++ L+ +Y+  G++ +A  LFD M  ++    +WNS+IS +
Sbjct: 98  GIRIHRLIPTSLLRKSVALSSKLLRLYASIGRIEEAHRLFDQMSRRNRSAFAWNSLISGY 157

Query: 522 SK----EPQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLF-SVMREKYRIT 358
           ++    E  +  YF QME++G++PD  TF  +L AC  +G +  G+ +   V+R  +   
Sbjct: 158 AELGLYEDAMALYF-QMEEEGVVPDRFTFPRVLKACGGIGSISVGEEVHRHVVRCGFADD 216

Query: 357 AIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHG 208
             V +   +V++Y + G I +A   + +++    S V W ++L     HG
Sbjct: 217 GFVLN--ALVDMYAKCGDIVKA-RKVFDKIVCRDS-VSWNSMLTGYIRHG 262


>ref|XP_011041723.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
            chloroplastic [Populus euphratica]
          Length = 530

 Score =  341 bits (874), Expect = 4e-91
 Identities = 166/240 (69%), Positives = 194/240 (80%), Gaps = 1/240 (0%)
 Frame = -1

Query: 771  MIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNG-KLN 595
            MI +G+E D               +  ++HGW++RRG+EWDLSIANSLI VY  NG KL+
Sbjct: 291  MIHDGMELDSVAVSTILANVSSFEVAVQIHGWIVRRGMEWDLSIANSLISVYYSNGRKLD 350

Query: 594  QACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAHLG 415
            +A WLFDHM  KD+VSWNSIISAH K+ + L YFE ME+DG+LPD ITFVSLLSACAHLG
Sbjct: 351  RARWLFDHMQEKDIVSWNSIISAHCKDLKALTYFELMERDGVLPDKITFVSLLSACAHLG 410

Query: 414  LVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGA 235
            LV DG+RLFS+M+ KY+I  I+EHYACMVNLYGRAGLINEAYA+I +QMEFEA P +WGA
Sbjct: 411  LVTDGERLFSLMKAKYQINPIMEHYACMVNLYGRAGLINEAYAIIRDQMEFEAGPTVWGA 470

Query: 234  LLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDRGL 55
            LLY+CYLH NVD GEIAAQ LF+LEPDNEHNFELLM+IY NA RLED ERV +M+VDRGL
Sbjct: 471  LLYSCYLHRNVDTGEIAAQYLFDLEPDNEHNFELLMKIYGNADRLEDAERVRKMMVDRGL 530



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 58/230 (25%), Positives = 110/230 (47%), Gaps = 11/230 (4%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVK--DVVSWNSIISAH 523
           G ++H  +    +  ++ I++ L+ +YS  G +  A  +FD M  +      WNS+I+ +
Sbjct: 115 GVKIHRLIPINLLRRNVGISSKLVRLYSSCGDVELAHQVFDEMFKRGESAFPWNSLIAGY 174

Query: 522 SKE---PQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFSVMREKYRITAI 352
           ++       +A + QME++G+ PD  TF  +L AC  +GL+  G+   +V R+  R+   
Sbjct: 175 TESGLYEDAMALYFQMEEEGVEPDQFTFPRVLKACGGIGLIHIGE---AVHRDLVRLGFA 231

Query: 351 VEHYA--CMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHGNVDIGEIAAQ 178
            + +    +V++Y + G I +A   I ++++ + S + W ++L     HG      + A+
Sbjct: 232 NDGFVLNALVDMYAKCGDIVKA-RRIFDKIDCKDS-ISWNSMLTGYIRHG------LIAE 283

Query: 177 KLFELEPDNEHNFEL----LMRIYRNAGRLEDVERVERMLVDRGLEL*LS 40
            L  L        EL    +  I  N    E   ++   +V RG+E  LS
Sbjct: 284 ALHTLHSMIHDGMELDSVAVSTILANVSSFEVAVQIHGWIVRRGMEWDLS 333


>ref|XP_007038424.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
            gi|508775669|gb|EOY22925.1| Tetratricopeptide repeat-like
            superfamily protein [Theobroma cacao]
          Length = 773

 Score =  340 bits (872), Expect = 7e-91
 Identities = 159/242 (65%), Positives = 194/242 (80%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            FRGMI+ G EPD               I  ++HGW+LRRG EW+LS+ N+LIVVYS +GK
Sbjct: 532  FRGMIREGYEPDPVAMSTILSGVWSLKIALQIHGWILRRGNEWNLSVVNALIVVYSNHGK 591

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            L++A WLF  +P  DVVSWNSIIS HSK P+ L YFEQM   G LPD ITFV++LSACAH
Sbjct: 592  LDRASWLFHRIPEPDVVSWNSIISGHSKRPEALVYFEQMVSGGTLPDSITFVAILSACAH 651

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
            LG V+DG++LFS+MR+KY I  I+EHYACMVNLYGRAGLI+EA+ +I+E+MEFEA P +W
Sbjct: 652  LGFVRDGEQLFSLMRKKYAINPIMEHYACMVNLYGRAGLIDEAFTLIVERMEFEAGPTVW 711

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GALL+AC +HG++D+GEIAAQ LFELEPDNEHNFELL +IY NAGRLEDVERV +M++DR
Sbjct: 712  GALLHACSVHGHIDVGEIAAQNLFELEPDNEHNFELLKKIYSNAGRLEDVERVSKMMLDR 771

Query: 60   GL 55
            GL
Sbjct: 772  GL 773



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 6/169 (3%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKD--VVSWNSIISAH 523
           G ++H  V +  +  +  I++ L+ +Y+  G +  A  +FD M  ++     WNS+IS +
Sbjct: 359 GIKIHNLVPKTLLRKNTGISSKLLRLYASCGHIESAHQVFDEMSKRNESAFPWNSLISGY 418

Query: 522 SKEPQ---VLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLF-SVMREKYRITA 355
           ++  Q    LA + QME++G+ PD  TF   L ACA +GL++ G+ +   V+R+ +    
Sbjct: 419 AELGQYEDALAIYFQMEEEGVEPDRYTFPRALKACAGIGLIQIGEAVHRDVVRKGFGNDG 478

Query: 354 IVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHG 208
            V +   ++++Y + G I +A   + + +  +   V W ++L     HG
Sbjct: 479 FVLN--ALIDMYAKCGDIVKA-RRVFDNIACK-DTVSWNSMLTGYIRHG 523


>gb|AHB18407.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 522

 Score =  338 bits (866), Expect = 3e-90
 Identities = 157/242 (64%), Positives = 190/242 (78%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            FRGMIQ G EPD                 A++HGWVLRRG+EWD S+ N++IVVYS  GK
Sbjct: 281  FRGMIQEGFEPDSVTISTILSSFCSLKTAAQIHGWVLRRGIEWDTSVVNAMIVVYSNLGK 340

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            L+ A WLF  MP +D+VSWNSIIS HSK P+ L YFEQM +    PD ITFV++LSACAH
Sbjct: 341  LDGASWLFQRMPERDIVSWNSIISGHSKNPEALLYFEQMVRSCTSPDSITFVAILSACAH 400

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
            LGLVKDG+RLF +MR+KY I   +EHYACM+NLYGRAGLI+EA+ MI+E+MEFEA P +W
Sbjct: 401  LGLVKDGERLFWLMRKKYGIDPRMEHYACMINLYGRAGLIDEAFNMIVERMEFEAGPTVW 460

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GA+LYAC +HGN+ IGEIA QKLFELEPDN+HNFELLM+IY NAGR+ED ERV ++++DR
Sbjct: 461  GAMLYACSVHGNIQIGEIAGQKLFELEPDNQHNFELLMKIYSNAGRVEDAERVRKLMLDR 520

Query: 60   GL 55
            GL
Sbjct: 521  GL 522



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 45/169 (26%), Positives = 89/169 (52%), Gaps = 6/169 (3%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDVVS--WNSIISAH 523
           G  +H  V +  +  +  I++ L+ +Y+  G++  A  +FD M  ++  +  WNS+IS +
Sbjct: 108 GIAIHRLVPQNLLRKNTGISSKLLRLYATAGRMESAHQVFDQMSKRNEYAFPWNSLISGY 167

Query: 522 SKEPQ---VLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLF-SVMREKYRITA 355
           ++  Q    LA + QME++G+ PD  TF   L ACA +G +  GQ +   V+R+ +    
Sbjct: 168 AELGQYEDALALYFQMEEEGVEPDRFTFPRALKACAGIGSIHVGQAVHRDVVRKGFGNDV 227

Query: 354 IVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHG 208
            V +   ++++Y + G I +A   + + +  + + + W ++L     HG
Sbjct: 228 FVLN--ALIDMYAKCGDIVKA-RRVFDSIACKDN-ISWNSMLTGYIRHG 272


>ref|XP_008377840.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
            chloroplastic [Malus domestica]
          Length = 757

 Score =  336 bits (862), Expect = 9e-90
 Identities = 159/243 (65%), Positives = 193/243 (79%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            FR M   G +PD               +  ++HGWV+R GVEW+LSIAN+LI  YSK+ +
Sbjct: 514  FRQMFDEGYQPDSVSISTILAAVQSLQLVVQIHGWVIRMGVEWNLSIANALIAAYSKHHE 573

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            LN+A WLF HMP +DVV+WN+IISAHSK  + L YF+QMEKDG LPD ITFVS+LSACA+
Sbjct: 574  LNRARWLFSHMPERDVVTWNTIISAHSKSREALLYFDQMEKDGALPDSITFVSILSACAN 633

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
            LGLVKDGQRL+SVM+ +YRI+ I+EHYACMVNLYGR+G I EAY +I + MEFEA P +W
Sbjct: 634  LGLVKDGQRLYSVMKNRYRISPIMEHYACMVNLYGRSGRIKEAYGIITDGMEFEAGPTVW 693

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GALLYACYLH NVDIGE+AA+KLF+LEPDNE+NFELLM IY N GRLEDVERV  M+++R
Sbjct: 694  GALLYACYLHSNVDIGEVAAEKLFDLEPDNEYNFELLMMIYGNVGRLEDVERVRLMMMER 753

Query: 60   GLE 52
            GL+
Sbjct: 754  GLD 756



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 46/169 (27%), Positives = 92/169 (54%), Gaps = 8/169 (4%)
 Frame = -1

Query: 690 RVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDV--VSWNSIISAHSK 517
           RVH  + R  +  ++ +++ L+ +Y+ +G++ +A  +FD MP +D    +WN++IS +++
Sbjct: 343 RVHKLIPRSLLRRNVGLSSKLLRLYAASGRMEEAHKVFDEMPKRDASAFAWNALISGYAE 402

Query: 516 ----EPQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFSVMREKYRITAIV 349
               E  +  YF QME++G+ PD  TF  +L AC  +G ++ G+   +V R   R   + 
Sbjct: 403 LGLYEDAMALYF-QMEEEGVEPDRFTFPRVLKACGGIGFIQIGE---AVHRHVVRSGLLN 458

Query: 348 EHYA--CMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHG 208
           + +    +V++Y + G I +A   + +++      V W  +L +   HG
Sbjct: 459 DRFVLNALVDMYAKCGDIVKA-RKVFDKIS-SRDKVSWNTMLTSYMRHG 505



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
 Frame = -1

Query: 771 MIQNGIEPDXXXXXXXXXXXXXXXI---GARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
           M + G+EPD                   G  VH  V+R G+  D  + N+L+ +Y+K G 
Sbjct: 416 MEEEGVEPDRFTFPRVLKACGGIGFIQIGEAVHRHVVRSGLLNDRFVLNALVDMYAKCGD 475

Query: 600 LNQACWLFDHMPVKDVVSWNSIISAHSKEP---QVLAYFEQMEKDGILPDHITFVSLLSA 430
           + +A  +FD +  +D VSWN++++++ +     Q L  F QM  +G  PD ++  ++L+A
Sbjct: 476 IVKARKVFDKISSRDKVSWNTMLTSYMRHGVLLQALDIFRQMFDEGYQPDSVSISTILAA 535

Query: 429 CAHLGLV 409
              L LV
Sbjct: 536 VQSLQLV 542


>ref|XP_012439159.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
            chloroplastic [Gossypium raimondii]
          Length = 770

 Score =  335 bits (859), Expect = 2e-89
 Identities = 156/242 (64%), Positives = 189/242 (78%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            FRGMIQ G EPD                 A++HGWVLRRG+EW+ S+ N++IVVYS  GK
Sbjct: 529  FRGMIQEGFEPDSVTISTILSSFCSLKTAAQIHGWVLRRGIEWNTSVVNAMIVVYSNLGK 588

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            L+ A WLF  MP +D+VSWNSIIS HSK P  L YFEQM +    PD ITFV++LSACAH
Sbjct: 589  LDGASWLFQRMPERDIVSWNSIISGHSKNPDALLYFEQMVRSCTSPDSITFVAILSACAH 648

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
            LGLVKDG+RLF +MR+KY I   +EHYACM+NLYGRAGLI+EA+ MI+E+MEFEA P +W
Sbjct: 649  LGLVKDGERLFWLMRKKYGIDPRMEHYACMINLYGRAGLIDEAFNMIVERMEFEAGPTVW 708

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GA+LYAC +HGN+ IGEIA QKLFELEPDN+HNFELLM+IY NAGR+ED ERV ++++DR
Sbjct: 709  GAMLYACSVHGNIQIGEIAGQKLFELEPDNQHNFELLMKIYSNAGRVEDAERVRKLMLDR 768

Query: 60   GL 55
            GL
Sbjct: 769  GL 770



 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 40/278 (14%)
 Frame = -1

Query: 771  MIQNGIEPDXXXXXXXXXXXXXXXI---GARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            M + G+EPD                   G  VH  V+R+G   DL + N+LI +Y+K G 
Sbjct: 431  MEEEGVEPDRFTFPRALKACAGIGSIHVGQAVHRDVVRKGFGNDLFVLNALIDMYAKCGD 490

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKE---PQVLAYFEQMEKDGILPDHITFVSLLSA 430
            + +A  +FD +  KD +SWNS+++ + ++      L  F  M ++G  PD +T  ++LS+
Sbjct: 491  IVKARRVFDSIACKDNISWNSMLTGYIRQGLLAGALQVFRGMIQEGFEPDSVTISTILSS 550

Query: 429  CAHLGLVKDGQRLFS-VMREKYR-----ITAIVEHYACMVNLYGRAGLI----------- 301
               L   K   ++   V+R         + A++  Y+ +  L G + L            
Sbjct: 551  FCSL---KTAAQIHGWVLRRGIEWNTSVVNAMIVVYSNLGKLDGASWLFQRMPERDIVSW 607

Query: 300  ---------NEAYAMIIEQMEFEAS---PVMWGALLYACYLHGNVDIGE---IAAQKLFE 166
                     N    +  EQM    +    + + A+L AC   G V  GE      +K + 
Sbjct: 608  NSIISGHSKNPDALLYFEQMVRSCTSPDSITFVAILSACAHLGLVKDGERLFWLMRKKYG 667

Query: 165  LEPDNEHNFELLMRIYRNAGRLEDVER--VERMLVDRG 58
            ++P  EH +  ++ +Y  AG +++     VERM  + G
Sbjct: 668  IDPRMEH-YACMINLYGRAGLIDEAFNMIVERMEFEAG 704



 Score = 61.2 bits (147), Expect = 8e-07
 Identities = 41/141 (29%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDVVS--WNSIISAH 523
           G  +H  V +  +  +  I++ L+ +Y+  G++  A  +FD M  ++  +  WNS+IS +
Sbjct: 356 GIAIHRLVPQNLLRKNTGISSKLLRLYATAGRMESAHQVFDQMSKRNEYAFPWNSLISGY 415

Query: 522 SKEPQ---VLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLF-SVMREKYRITA 355
           ++  Q    LA + QME++G+ PD  TF   L ACA +G +  GQ +   V+R+ +    
Sbjct: 416 AELGQYEDALALYFQMEEEGVEPDRFTFPRALKACAGIGSIHVGQAVHRDVVRKGFGNDL 475

Query: 354 IVEHYACMVNLYGRAGLINEA 292
            V +   ++++Y + G I +A
Sbjct: 476 FVLN--ALIDMYAKCGDIVKA 494


>gb|KJB51454.1| hypothetical protein B456_008G216900 [Gossypium raimondii]
          Length = 522

 Score =  335 bits (859), Expect = 2e-89
 Identities = 156/242 (64%), Positives = 189/242 (78%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            FRGMIQ G EPD                 A++HGWVLRRG+EW+ S+ N++IVVYS  GK
Sbjct: 281  FRGMIQEGFEPDSVTISTILSSFCSLKTAAQIHGWVLRRGIEWNTSVVNAMIVVYSNLGK 340

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            L+ A WLF  MP +D+VSWNSIIS HSK P  L YFEQM +    PD ITFV++LSACAH
Sbjct: 341  LDGASWLFQRMPERDIVSWNSIISGHSKNPDALLYFEQMVRSCTSPDSITFVAILSACAH 400

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
            LGLVKDG+RLF +MR+KY I   +EHYACM+NLYGRAGLI+EA+ MI+E+MEFEA P +W
Sbjct: 401  LGLVKDGERLFWLMRKKYGIDPRMEHYACMINLYGRAGLIDEAFNMIVERMEFEAGPTVW 460

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GA+LYAC +HGN+ IGEIA QKLFELEPDN+HNFELLM+IY NAGR+ED ERV ++++DR
Sbjct: 461  GAMLYACSVHGNIQIGEIAGQKLFELEPDNQHNFELLMKIYSNAGRVEDAERVRKLMLDR 520

Query: 60   GL 55
            GL
Sbjct: 521  GL 522



 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 40/278 (14%)
 Frame = -1

Query: 771  MIQNGIEPDXXXXXXXXXXXXXXXI---GARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            M + G+EPD                   G  VH  V+R+G   DL + N+LI +Y+K G 
Sbjct: 183  MEEEGVEPDRFTFPRALKACAGIGSIHVGQAVHRDVVRKGFGNDLFVLNALIDMYAKCGD 242

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKE---PQVLAYFEQMEKDGILPDHITFVSLLSA 430
            + +A  +FD +  KD +SWNS+++ + ++      L  F  M ++G  PD +T  ++LS+
Sbjct: 243  IVKARRVFDSIACKDNISWNSMLTGYIRQGLLAGALQVFRGMIQEGFEPDSVTISTILSS 302

Query: 429  CAHLGLVKDGQRLFS-VMREKYR-----ITAIVEHYACMVNLYGRAGLI----------- 301
               L   K   ++   V+R         + A++  Y+ +  L G + L            
Sbjct: 303  FCSL---KTAAQIHGWVLRRGIEWNTSVVNAMIVVYSNLGKLDGASWLFQRMPERDIVSW 359

Query: 300  ---------NEAYAMIIEQMEFEAS---PVMWGALLYACYLHGNVDIGE---IAAQKLFE 166
                     N    +  EQM    +    + + A+L AC   G V  GE      +K + 
Sbjct: 360  NSIISGHSKNPDALLYFEQMVRSCTSPDSITFVAILSACAHLGLVKDGERLFWLMRKKYG 419

Query: 165  LEPDNEHNFELLMRIYRNAGRLEDVER--VERMLVDRG 58
            ++P  EH +  ++ +Y  AG +++     VERM  + G
Sbjct: 420  IDPRMEH-YACMINLYGRAGLIDEAFNMIVERMEFEAG 456



 Score = 61.2 bits (147), Expect = 8e-07
 Identities = 41/141 (29%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDVVS--WNSIISAH 523
           G  +H  V +  +  +  I++ L+ +Y+  G++  A  +FD M  ++  +  WNS+IS +
Sbjct: 108 GIAIHRLVPQNLLRKNTGISSKLLRLYATAGRMESAHQVFDQMSKRNEYAFPWNSLISGY 167

Query: 522 SKEPQ---VLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLF-SVMREKYRITA 355
           ++  Q    LA + QME++G+ PD  TF   L ACA +G +  GQ +   V+R+ +    
Sbjct: 168 AELGQYEDALALYFQMEEEGVEPDRFTFPRALKACAGIGSIHVGQAVHRDVVRKGFGNDL 227

Query: 354 IVEHYACMVNLYGRAGLINEA 292
            V +   ++++Y + G I +A
Sbjct: 228 FVLN--ALIDMYAKCGDIVKA 246


>ref|XP_009374559.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 475

 Score =  330 bits (847), Expect = 5e-88
 Identities = 157/243 (64%), Positives = 193/243 (79%)
 Frame = -1

Query: 780 FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
           FR M   G +PD               +  ++HGWV+RRGV W+LSIAN+LI  YSK+ +
Sbjct: 232 FRQMFDEGYQPDSVSISTILTAVQSLQLVVQIHGWVIRRGVGWNLSIANALISAYSKHHE 291

Query: 600 LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
           LN+A WLF HMP +DVV+WN+IISAHSK  + L YF+QMEKDG LPD ITFVS+LSACA+
Sbjct: 292 LNRARWLFSHMPERDVVTWNTIISAHSKSREALLYFDQMEKDGALPDSITFVSILSACAN 351

Query: 420 LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
           L LVKDGQRL+SVM+ +YRI+ I+EHYACMVNLYGR+G I EAY +I + MEFEA P +W
Sbjct: 352 LRLVKDGQRLYSVMKNRYRISPIMEHYACMVNLYGRSGRIKEAYGIITDGMEFEAGPTVW 411

Query: 240 GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
           GALLYACYL+GNVDIGE+AA+KLF+L+PDNE+NF+LLM+IY N G LEDVERV  M+VDR
Sbjct: 412 GALLYACYLYGNVDIGEVAAEKLFDLKPDNEYNFKLLMKIYGNVGMLEDVERVRLMMVDR 471

Query: 60  GLE 52
           GL+
Sbjct: 472 GLD 474


>ref|XP_009374508.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 508

 Score =  330 bits (846), Expect = 7e-88
 Identities = 158/243 (65%), Positives = 191/243 (78%)
 Frame = -1

Query: 780 FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
           FR M   G +PD               +  ++HG V+RRGVEW+LSIAN+LI  YSK+ +
Sbjct: 265 FRQMFDEGYQPDSVSVSSILAAVQSLQLVVQIHGRVIRRGVEWNLSIANALISAYSKHHE 324

Query: 600 LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
           LN+A WLF HMP +DVV+WN+IISAHSK  + L YF+QMEKDG LPD ITFVS+LSACA+
Sbjct: 325 LNRARWLFSHMPERDVVTWNTIISAHSKSREALLYFDQMEKDGALPDSITFVSILSACAN 384

Query: 420 LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
           L LVKDGQRL+ VM+ +YRIT I+EHYACMVNLYGR+G I EAY +I + MEFEA P +W
Sbjct: 385 LCLVKDGQRLYYVMKNRYRITPIMEHYACMVNLYGRSGRIKEAYGIITDGMEFEAGPTVW 444

Query: 240 GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
           GALLYACYLH N D+GE+AA+KLF+LEPDNE+NFELLM+IY N GRLEDVERV  M+VDR
Sbjct: 445 GALLYACYLHNNADVGEVAAEKLFDLEPDNEYNFELLMKIYGNVGRLEDVERVRLMMVDR 504

Query: 60  GLE 52
           GL+
Sbjct: 505 GLD 507



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 59/229 (25%), Positives = 121/229 (52%), Gaps = 10/229 (4%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDV--VSWNSIISAH 523
           G RVH  + R  +  ++ +++ L+ +Y+ +G++ +A  +FD MP +DV   +WN++IS +
Sbjct: 92  GHRVHKLIPRSLLRRNVGLSSKLLRLYAASGRMEEAHKVFDEMPKRDVSAFAWNALISGY 151

Query: 522 SK----EPQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFSVMREKYRITA 355
           ++    E  +  YF QME++G+ PD  TF  +L AC  +G ++ G+   +V R   R+  
Sbjct: 152 AELGLYEDAMALYF-QMEEEGVEPDRFTFPRVLKACGGIGFIQIGE---AVHRHVVRLGL 207

Query: 354 IVEHYA--CMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHGNVDIGEIAA 181
           + + +    +V++Y + G I +A   + +++      V W  +L +   HG +       
Sbjct: 208 LNDRFVLNALVDMYAKCGDIVKA-RKVFDKIS-GRDKVSWNTMLTSYMRHGLLLQALDIF 265

Query: 180 QKLFE--LEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDRGLEL*LS 40
           +++F+   +PD+     +L  +      L+ V ++   ++ RG+E  LS
Sbjct: 266 RQMFDEGYQPDSVSVSSILAAVQ----SLQLVVQIHGRVIRRGVEWNLS 310



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
 Frame = -1

Query: 771 MIQNGIEPDXXXXXXXXXXXXXXXI---GARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
           M + G+EPD                   G  VH  V+R G+  D  + N+L+ +Y+K G 
Sbjct: 167 MEEEGVEPDRFTFPRVLKACGGIGFIQIGEAVHRHVVRLGLLNDRFVLNALVDMYAKCGD 226

Query: 600 LNQACWLFDHMPVKDVVSWNSIISAHSKEP---QVLAYFEQMEKDGILPDHITFVSLLSA 430
           + +A  +FD +  +D VSWN++++++ +     Q L  F QM  +G  PD ++  S+L+A
Sbjct: 227 IVKARKVFDKISGRDKVSWNTMLTSYMRHGLLLQALDIFRQMFDEGYQPDSVSVSSILAA 286

Query: 429 CAHLGLV 409
              L LV
Sbjct: 287 VQSLQLV 293


>ref|XP_007219319.1| hypothetical protein PRUPE_ppa019039mg [Prunus persica]
           gi|462415781|gb|EMJ20518.1| hypothetical protein
           PRUPE_ppa019039mg [Prunus persica]
          Length = 519

 Score =  330 bits (845), Expect = 9e-88
 Identities = 150/213 (70%), Positives = 185/213 (86%)
 Frame = -1

Query: 690 RVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDVVSWNSIISAHSKEP 511
           ++HGWV+R+GVEW+LSIAN+LI  YS + KLN+A WLF HM  +DV++WN++ISAHSK P
Sbjct: 307 QIHGWVIRQGVEWNLSIANALIAAYSNHRKLNRARWLFCHMSERDVITWNTMISAHSKSP 366

Query: 510 QVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFSVMREKYRITAIVEHYACM 331
           + L +FEQME  G LPD ITFVS+LS CAHLGLVKDG+RL+SVM+ +YRI+ I+EHYACM
Sbjct: 367 EALLFFEQMESSGALPDSITFVSILSTCAHLGLVKDGERLYSVMKNRYRISPIMEHYACM 426

Query: 330 VNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHGNVDIGEIAAQKLFELEPDN 151
           VNLYGRAG I EAY +I++ MEFEA P +WGALLYACYLHGNVDIGE+AA++LFELEPDN
Sbjct: 427 VNLYGRAGRIREAYGIIVDGMEFEAGPTVWGALLYACYLHGNVDIGEVAAERLFELEPDN 486

Query: 150 EHNFELLMRIYRNAGRLEDVERVERMLVDRGLE 52
           E+NFELL++IY N GRLEDVERV  M+V+RGL+
Sbjct: 487 EYNFELLIKIYGNVGRLEDVERVRLMMVERGLD 519



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 50/171 (29%), Positives = 94/171 (54%), Gaps = 8/171 (4%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDV--VSWNSIISAH 523
           G RVH  + R  +  ++ I++ L+ +Y+ +G + +A  +FD MP +DV   +WNS+IS +
Sbjct: 103 GLRVHRLIPRSVLRRNVGISSKLLRLYASHGYIEEAHQVFDEMPKRDVSAFAWNSLISGY 162

Query: 522 SK----EPQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFSVMREKYRITA 355
           ++    E  +  YF QME++G+ PD  TF  +L AC  +G ++ G+   +V R   R+  
Sbjct: 163 AELGLYEDAMALYF-QMEEEGVEPDRFTFPRVLKACGGIGFIQIGE---AVHRHIVRLGL 218

Query: 354 IVEHYA--CMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHG 208
           + + +    +V++Y + G I +A   + +++      V W  +L +   HG
Sbjct: 219 LNDRFVLNALVDMYAKCGDIVKA-RKVFDKIT-SRDHVSWNTMLTSYMRHG 267


>ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
            lyrata] gi|297313453|gb|EFH43876.1| hypothetical protein
            ARALYDRAFT_354257 [Arabidopsis lyrata subsp. lyrata]
          Length = 758

 Score =  328 bits (842), Expect = 2e-87
 Identities = 154/243 (63%), Positives = 192/243 (79%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            FR M+QNGI+PD                G ++HGWV+RRG+EW+LS+AN+LIV+YSK G+
Sbjct: 515  FRLMVQNGIDPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQ 574

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            L QAC++FD M  +D VSWN+IISAHS++     YFEQM+     PD ITFVS+LS CA+
Sbjct: 575  LGQACFIFDQMLERDTVSWNAIISAHSRDSNGFKYFEQMQHADAKPDGITFVSVLSLCAN 634

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
             G+V+DG+RLFS+M ++Y I   +EHYACMVNLYGRAG++ EAY+MI+++MEFEA P +W
Sbjct: 635  TGMVEDGERLFSLMSKEYGINPKMEHYACMVNLYGRAGMMEEAYSMIVQEMEFEAGPTVW 694

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GALLYACYLHGN DIGE++AQ+LFELEPDNEHNFELLMRIY  A R EDVERV +MLVDR
Sbjct: 695  GALLYACYLHGNTDIGEVSAQRLFELEPDNEHNFELLMRIYSKAKRAEDVERVRQMLVDR 754

Query: 60   GLE 52
            GLE
Sbjct: 755  GLE 757



 Score = 68.9 bits (167), Expect = 4e-09
 Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
 Frame = -1

Query: 696  GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDVVSWNSIISA--- 526
            G  +H  +++ G  +D+ + N+L+ +Y+K G + +A  +FD +P KD VSWNS+++    
Sbjct: 445  GEAIHRDLVKAGFGYDVHVLNALVDMYAKCGDIVKARNVFDMIPNKDYVSWNSMLTGYLH 504

Query: 525  HSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFS-VMREKYRITAIV 349
            H    + L  F  M ++GI PD +   S+L   A +   K G++L   V+R        V
Sbjct: 505  HGLLHEALDIFRLMVQNGIDPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSV 561

Query: 348  EHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHGNVDIGEIAAQKLF 169
             +   ++ LY + G + +A   I +QM  E   V W A++ A     N         +  
Sbjct: 562  AN--ALIVLYSKRGQLGQA-CFIFDQM-LERDTVSWNAIISAHSRDSN-GFKYFEQMQHA 616

Query: 168  ELEPDNEHNFELLMRIYRNAGRLEDVERV 82
            + +PD    F  ++ +  N G +ED ER+
Sbjct: 617  DAKPDG-ITFVSVLSLCANTGMVEDGERL 644



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 7/226 (3%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDV--VSWNSIISAH 523
           G RVH  +    +  ++ I++ L+ +Y+  G    A  +FD M  ++    +WNS+IS +
Sbjct: 342 GVRVHHLIPPYLLRNNVGISSKLVRLYASCGYAEVAHEVFDRMSKRESSPFAWNSLISGY 401

Query: 522 SKEPQ---VLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFSVMREKYRITAI 352
           ++  Q    +A + QM +DG+ PD  TF  +L AC  +G V+ G+ +   +  K      
Sbjct: 402 AELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL-VKAGFGYD 460

Query: 351 VEHYACMVNLYGRAGLINEAYAM--IIEQMEFEASPVMWGALLYACYLHGNVDIGEIAAQ 178
           V     +V++Y + G I +A  +  +I   ++ +   M    L+   LH  +DI  +  Q
Sbjct: 461 VHVLNALVDMYAKCGDIVKARNVFDMIPNKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQ 520

Query: 177 KLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDRGLEL*LS 40
               ++PD      +L R+       +   ++   ++ RG+E  LS
Sbjct: 521 N--GIDPDKVAISSVLARVL----SFKHGRQLHGWVIRRGMEWELS 560


>ref|XP_008234381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic [Prunus mume]
          Length = 519

 Score =  328 bits (840), Expect = 3e-87
 Identities = 149/213 (69%), Positives = 184/213 (86%)
 Frame = -1

Query: 690 RVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDVVSWNSIISAHSKEP 511
           ++HGWV+R+GVEW+LSIAN+LI  YS + KLN+A WLF HMP +DV++WN++ISA SK P
Sbjct: 307 QIHGWVIRQGVEWNLSIANALIAAYSNHRKLNRARWLFCHMPERDVITWNTMISARSKSP 366

Query: 510 QVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFSVMREKYRITAIVEHYACM 331
           + L +FEQME  G LPD ITFVS+LSACAHLGLVKDG+RL+SVM+ +YRI+ I+EHYACM
Sbjct: 367 EALLFFEQMESSGALPDSITFVSILSACAHLGLVKDGERLYSVMKNRYRISPIMEHYACM 426

Query: 330 VNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHGNVDIGEIAAQKLFELEPDN 151
           VNLYGRAG + EAY +I++ MEFEA P +WGALLYACYLHGNVDIGE+AA++LFELEPDN
Sbjct: 427 VNLYGRAGRMREAYGIIVDGMEFEAGPTVWGALLYACYLHGNVDIGEVAAERLFELEPDN 486

Query: 150 EHNFELLMRIYRNAGRLEDVERVERMLVDRGLE 52
           E+NFELLM+IY N GRLEDVERV   + +RGL+
Sbjct: 487 EYNFELLMKIYGNVGRLEDVERVRLTMAERGLD 519



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 50/171 (29%), Positives = 94/171 (54%), Gaps = 8/171 (4%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDV--VSWNSIISAH 523
           G RVH  + R  +  ++ I++ L+ +Y+ +G + +A  +FD MP +DV   +WNS+IS +
Sbjct: 103 GLRVHRLIPRSVLRRNVGISSKLLRLYASHGYIEEAHQVFDEMPKRDVSAFAWNSLISGY 162

Query: 522 SK----EPQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFSVMREKYRITA 355
           ++    E  +  YF QME++G+ PD  TF  +L AC  +G ++ G+   +V R   R+  
Sbjct: 163 AELGLYEDAMALYF-QMEEEGVEPDRFTFPRVLKACGGIGFIQIGE---AVHRHIVRLGL 218

Query: 354 IVEHYA--CMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHG 208
           + + +    +V++Y + G I +A   + +++      V W  +L +   HG
Sbjct: 219 LNDRFVLNALVDMYAKCGDIVKA-RKVFDKIT-SRDHVSWNTMLTSYMRHG 267


>ref|XP_010448452.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
            chloroplastic [Camelina sativa]
          Length = 527

 Score =  327 bits (837), Expect = 7e-87
 Identities = 153/243 (62%), Positives = 191/243 (78%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            FR M+Q+GIEP                 G ++HGWVLRRG+EW+LS+AN+LIV+YSK G+
Sbjct: 284  FRLMVQDGIEPGKVAISSVLARVLSFKHGRQLHGWVLRRGMEWELSVANALIVLYSKRGQ 343

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            L QAC++FD MP +D VSWN+IISAHSK+   L YFEQM++    PD ITFVS+LS CA+
Sbjct: 344  LGQACFIFDQMPERDTVSWNAIISAHSKDSNGLKYFEQMQRANARPDGITFVSVLSVCAN 403

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
             G+V+ G+RLFS+M ++Y I   +EHYACMVNLYGRAG++ EAY+MI+++M  EA P +W
Sbjct: 404  TGMVEVGERLFSLMSKEYEINPKMEHYACMVNLYGRAGMVEEAYSMIVQEMGSEAGPTVW 463

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GALLYACYLHGN DIGE+AAQ+LFELEPDNEHNFELLMR+Y  A R EDVERV +M+VDR
Sbjct: 464  GALLYACYLHGNADIGEVAAQRLFELEPDNEHNFELLMRVYSKAKRAEDVERVRQMMVDR 523

Query: 60   GLE 52
            GLE
Sbjct: 524  GLE 526



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 39/240 (16%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDVVSWNSIISA--- 526
           G  +H  +++ G  +D+ + N+L+ +Y+K G + +   +FD +P KD VSWNS+++    
Sbjct: 214 GEAIHRDLVKAGFGFDVYVLNALVDMYAKCGDIVKGRNVFDMIPHKDYVSWNSMLTGYLH 273

Query: 525 HSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFS-VMREKYRITAIV 349
           H    + L  F  M +DGI P  +   S+L   A +   K G++L   V+R        V
Sbjct: 274 HGLLHEALDIFRLMVQDGIEPGKVAISSVL---ARVLSFKHGRQLHGWVLRRGMEWELSV 330

Query: 348 EHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYA------------------ 223
            +   ++ LY + G + +A   I +QM  E   V W A++ A                  
Sbjct: 331 AN--ALIVLYSKRGQLGQA-CFIFDQMP-ERDTVSWNAIISAHSKDSNGLKYFEQMQRAN 386

Query: 222 --------------CYLHGNVDIGE---IAAQKLFELEPDNEHNFELLMRIYRNAGRLED 94
                         C   G V++GE       K +E+ P  EH +  ++ +Y  AG +E+
Sbjct: 387 ARPDGITFVSVLSVCANTGMVEVGERLFSLMSKEYEINPKMEH-YACMVNLYGRAGMVEE 445



 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDV--VSWNSIISAH 523
           G RVH  +    +  +L I++ L+ +Y+  G    A  +FD M  ++    +WNS+IS +
Sbjct: 111 GVRVHHLIPPYLLRNNLGISSKLVRLYASCGFAEVAHEVFDRMSKRESSPFAWNSLISGY 170

Query: 522 SKEPQ---VLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFSVM------REK 370
           ++  Q    +A + QM +DG+ PD  TF  +L AC  +G V+ G+ +   +       + 
Sbjct: 171 AELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKAGFGFDV 230

Query: 369 YRITAIVEHYA 337
           Y + A+V+ YA
Sbjct: 231 YVLNALVDMYA 241


>ref|NP_194257.1| pentatricopeptide repeat protein OTP70 [Arabidopsis thaliana]
            gi|75265547|sp|Q9SB36.1|PP337_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g25270, chloroplastic; Flags: Precursor
            gi|4454015|emb|CAA23068.1| putative protein [Arabidopsis
            thaliana] gi|7269378|emb|CAB81338.1| putative protein
            [Arabidopsis thaliana] gi|332659633|gb|AEE85033.1|
            pentatricopeptide repeat protein OTP70 [Arabidopsis
            thaliana]
          Length = 527

 Score =  326 bits (835), Expect = 1e-86
 Identities = 154/243 (63%), Positives = 190/243 (78%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            FR M+QNGIEPD                G ++HGWV+RRG+EW+LS+AN+LIV+YSK G+
Sbjct: 284  FRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQ 343

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            L QAC++FD M  +D VSWN+IISAHSK    L YFEQM +    PD ITFVS+LS CA+
Sbjct: 344  LGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCAN 403

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
             G+V+DG+RLFS+M ++Y I   +EHYACMVNLYGRAG++ EAY+MI+++M  EA P +W
Sbjct: 404  TGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVW 463

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GALLYACYLHGN DIGE+AAQ+LFELEPDNEHNFELL+RIY  A R EDVERV +M+VDR
Sbjct: 464  GALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDR 523

Query: 60   GLE 52
            GLE
Sbjct: 524  GLE 526



 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 4/209 (1%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDVVSWNSIISA--- 526
           G  +H  +++ G  +D+ + N+L+V+Y+K G + +A  +FD +P KD VSWNS+++    
Sbjct: 214 GEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLH 273

Query: 525 HSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFS-VMREKYRITAIV 349
           H    + L  F  M ++GI PD +   S+L   A +   K G++L   V+R        V
Sbjct: 274 HGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSV 330

Query: 348 EHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHGNVDIGEIAAQKLF 169
            +   ++ LY + G + +A   I +QM  E   V W A++ A   + N  +         
Sbjct: 331 AN--ALIVLYSKRGQLGQA-CFIFDQM-LERDTVSWNAIISAHSKNSN-GLKYFEQMHRA 385

Query: 168 ELEPDNEHNFELLMRIYRNAGRLEDVERV 82
             +PD    F  ++ +  N G +ED ER+
Sbjct: 386 NAKPDG-ITFVSVLSLCANTGMVEDGERL 413



 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 8/227 (3%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDV--VSWNSIISAH 523
           G RVH  +    +  +L I++ L+ +Y+  G    A  +FD M  +D    +WNS+IS +
Sbjct: 111 GVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGY 170

Query: 522 SKEPQ---VLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLF-SVMREKYRITA 355
           ++  Q    +A + QM +DG+ PD  TF  +L AC  +G V+ G+ +   +++E +    
Sbjct: 171 AELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDV 230

Query: 354 IVEHYACMVNLYGRAGLINEAYAM--IIEQMEFEASPVMWGALLYACYLHGNVDIGEIAA 181
            V +   +V +Y + G I +A  +  +I   ++ +   M    L+   LH  +DI  +  
Sbjct: 231 YVLN--ALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV 288

Query: 180 QKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDRGLEL*LS 40
           Q    +EPD      +L R+       +   ++   ++ RG+E  LS
Sbjct: 289 QN--GIEPDKVAISSVLARVL----SFKHGRQLHGWVIRRGMEWELS 329


>ref|XP_010056362.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
            chloroplastic [Eucalyptus grandis]
          Length = 538

 Score =  325 bits (834), Expect = 2e-86
 Identities = 152/244 (62%), Positives = 193/244 (79%)
 Frame = -1

Query: 780  FRGMIQNGIEPDXXXXXXXXXXXXXXXIGARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
            FR M+Q+  +PD               +G +VHGWV+R G+EW LS+ANSLIVVYS +G 
Sbjct: 292  FRRMLQDDFQPDSVAISAILTGISSLKLGLQVHGWVVRLGLEWTLSVANSLIVVYSNHGM 351

Query: 600  LNQACWLFDHMPVKDVVSWNSIISAHSKEPQVLAYFEQMEKDGILPDHITFVSLLSACAH 421
            L++A W+FD+M  +DVVSWN+I+SAHSK P  L+YFEQMEK  ++PD IT VSLLS  AH
Sbjct: 352  LDKARWIFDNMAERDVVSWNAIVSAHSKLPHALSYFEQMEKADVMPDRITLVSLLSTLAH 411

Query: 420  LGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEASPVMW 241
            +GLVKDG+ LFS MR+KY I   +EHYACMVNLYGR G+++EA+AMI E+MEFEA P +W
Sbjct: 412  IGLVKDGEELFSRMRDKYGIEPSMEHYACMVNLYGRRGMVDEAHAMIAERMEFEAGPTVW 471

Query: 240  GALLYACYLHGNVDIGEIAAQKLFELEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDR 61
            GALL+ACY+HGNV+IGE+AA+KLFELEPDNEHN+ LL++IY N GRL+DVE++  ML +R
Sbjct: 472  GALLHACYVHGNVEIGEVAAEKLFELEPDNEHNYALLIKIYENTGRLDDVEKMRMMLAER 531

Query: 60   GLEL 49
            GLEL
Sbjct: 532  GLEL 535



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 64/228 (28%), Positives = 115/228 (50%), Gaps = 9/228 (3%)
 Frame = -1

Query: 696 GARVHGWVLRRGVEWDLSIANSLIVVYSKNGKLNQACWLFDHMPVKDV--VSWNSIISAH 523
           GARVH  +    +  ++ +++ L+ +Y+ +G++  A  +FD MP +D    +WNS+IS +
Sbjct: 119 GARVHRLIPTNLLRRNVGLSSKLLRLYASSGRVGDAHEVFDQMPKRDASAFAWNSLISGY 178

Query: 522 SKEPQ---VLAYFEQMEKDGILPDHITFVSLLSACAHLGLVKDGQRLFSVMREKYRITAI 352
           ++  Q    LA + QME++G+ PD  TF  +L ACA +G ++ G+   +V R   R   +
Sbjct: 179 AELGQYEDALALYFQMEEEGVEPDRYTFPRVLKACAGIGSIRIGE---AVHRHAVRTGFV 235

Query: 351 VEHYA--CMVNLYGRAGLINEAYAMIIEQMEFEASPVMWGALLYACYLHGNVDIGEIAAQ 178
            + +    +V++Y + G I +A   + ++M      V W  +L     HG +    + A 
Sbjct: 236 SDCFVLNSLVDMYAKCGDIVQA-RKVFDKMP-SRDLVSWNTMLTGYIHHGLL----VEAV 289

Query: 177 KLFE--LEPDNEHNFELLMRIYRNAGRLEDVERVERMLVDRGLEL*LS 40
            LF   L+ D + +   +  I      L+   +V   +V  GLE  LS
Sbjct: 290 DLFRRMLQDDFQPDSVAISAILTGISSLKLGLQVHGWVVRLGLEWTLS 337



 Score = 61.2 bits (147), Expect = 8e-07
 Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 8/191 (4%)
 Frame = -1

Query: 771 MIQNGIEPDXXXXXXXXXXXXXXXI---GARVHGWVLRRGVEWDLSIANSLIVVYSKNGK 601
           M + G+EPD                   G  VH   +R G   D  + NSL+ +Y+K G 
Sbjct: 194 MEEEGVEPDRYTFPRVLKACAGIGSIRIGEAVHRHAVRTGFVSDCFVLNSLVDMYAKCGD 253

Query: 600 LNQACWLFDHMPVKDVVSWNSIISA---HSKEPQVLAYFEQMEKDGILPDHITFVSLLSA 430
           + QA  +FD MP +D+VSWN++++    H    + +  F +M +D   PD +   ++L+ 
Sbjct: 254 IVQARKVFDKMPSRDLVSWNTMLTGYIHHGLLVEAVDLFRRMLQDDFQPDSVAISAILTG 313

Query: 429 CA--HLGLVKDGQRLFSVMREKYRITAIVEHYACMVNLYGRAGLINEAYAMIIEQMEFEA 256
            +   LGL   G     V+R     T  V +   ++ +Y   G++++A   I + M  E 
Sbjct: 314 ISSLKLGLQVHGW----VVRLGLEWTLSVAN--SLIVVYSNHGMLDKA-RWIFDNMA-ER 365

Query: 255 SPVMWGALLYA 223
             V W A++ A
Sbjct: 366 DVVSWNAIVSA 376